R3F063 last accessed: 2022-11-04

Allele frequency net
metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:14.949155

allele_frequency_net
metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:14.949155

Other names: AFND, Allele Frequency Net, Allele Frequencies in Worldwide populations, Allele frequency net, allele_frequency_net

The Allele Frequency Net Database (AFND) provides the scientific community with a freely available repository for the storage of frequency data (alleles, genes, haplotypes and genotypes) related to human leukocyte antigens (HLA), killer-cell immunoglobulin-like receptors (KIR), major histocompatibility complex Class I chain related genes (MIC) and a number of cytokine gene polymorphisms in worldwide populations.

Webpage:

http://www.allelefrequencies.net

Licence:

Name: Public Domain
URL: http://www.allelefrequencies.net/faqs.asp

Publications:

Publications
More detailed information about this field from each metasource.

Allele frequency net: a database and online repository for immune gene frequencies in worldwide populations
PMID: 21062830
metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:14.949155

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
PMID: 31722398
metasource: Fairsharing.org
version: FAIRsharing.org: AFND; Allele Frequency Net Database; DOI: https://doi.org/10.25504/FAIRsharing.2cfr4z; Last edited: March 17, 2021, 2:12 p.m.; Last accessed: Jan 03 2022 7:06 p.m.

http://dx.doi.org/10.1093/nar/gku1166
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

Allele frequency net: a database and online repository for immune gene frequencies in worldwide populations PubMed citations: 236.

236 articles citing: Allele frequency net: a database and online repository for immune gene frequencies in worldwide populations

Influence of Disease Severity and Gender on HLA-C Methylation in COVID-19 Patients. PMID:35912367
Immunogenetic clustering of 30 cancers. PMID:35508592
The Prevalence of Pharmacogenomics Variants and Their Clinical Relevance Among the Pakistani Population. PMID:35497687
Evolution of HLA-B Pharmacogenomics and the Importance of PGx Data Integration in Health Care System: A 10 Years Retrospective Study in Thailand. PMID:35450046
Practical Considerations and Workflow in Utilizing KIR Genotyping in Transplantation Medicine. PMID:35344182
HLA-C*04:01 Affects HLA Class I Heterozygosity and Predicted Affinity to SARS-CoV-2 Peptides, and in Combination With Age and Sex of Armenian Patients Contributes to COVID-19 Severity. PMID:35185875
In silico construction of a multiepitope Zika virus vaccine using immunoinformatics tools. PMID:34997041
Killer-cell immunoglobulin-like receptor/human leukocyte antigen-C combination and 'great obstetrical syndromes' (Review). PMID:34504623
Maternal-Fetal HLA Compatibility in Uncomplicated and Preeclamptic Naturally Conceived Pregnancies. PMID:34054856
TAPBPR promotes antigen loading on MHC-I molecules using a peptide trap. PMID:34039964
Genetic Markers for Stevens-Johnson Syndrome/Toxic Epidermal Necrolysis in the Asian Indian Population: Implications on Prevention. PMID:33510770
In silico T cell epitope identification for SARS-CoV-2: Progress and perspectives. PMID:33465451
Class I HLA Allele Predicted Restricted Antigenic Coverages for Spike and Nucleocapsid Proteins Are Associated With Deaths Related to COVID-19. PMID:33391255
Differential attraction in mosquito-human interactions and implications for disease control. PMID:33357061
Validation study of HLA-B*13:01 as a biomarker of dapsone hypersensitivity syndrome in leprosy patients in Indonesia. PMID:33064728
HLA-DRB1*11 is a strong risk factor for acquired thrombotic thrombocytopenic purpura in children. PMID:33054098
Analysis of Putative Epitope Candidates of Mycobacterium tuberculosis Against Pakistani Human Leukocyte Antigen Background: An Immunoinformatic Study for the Development of Future Vaccine. PMID:32922244
Integrated genomic analysis reveals mutated ELF3 as a potential gallbladder cancer vaccine candidate. PMID:32839463
Identification of Clonal Neoantigens Derived From Driver Mutations in an EGFR-Mutated Lung Cancer Patient Benefitting From Anti-PD-1. PMID:32793190
Native American ancestry significantly contributes to neuromyelitis optica susceptibility in the admixed Mexican population. PMID:32792643
Immunoinformatics study to search epitopes of spike glycoprotein from SARS-CoV-2 as potential vaccine. PMID:32583729
Autoantibodies against cytokines: phenocopies of primary immunodeficiencies? PMID:32419033
Structure-Based Immunogenicity Prediction of Uricase from Fungal (Aspergillus flavus), Bacterial (Bacillus subtillis) and Mammalian Sources Using Immunoinformatic Approach. PMID:32221804
Granulocyte-Colony-Stimulating Factor Effectively Shortens Recovery Duration in Anti-Thyroid-Drug-Induced Agranulocytosis: A Systematic Review and Meta-Analysis. PMID:31824417
Allelic association with ankylosing spondylitis fails to correlate with human leukocyte antigen B27 homodimer formation. PMID:31740583
Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools. PMID:31722398
High and variable population prevalence of HLA-B*56:02 in indigenous Australians and relation to phenytoin-associated drug reaction with eosinophilia and systemic symptoms. PMID:31206740
Immunoinformatics Based Study of T Cell Epitopes in Zea m 1 Pollen Allergen. PMID:31159395
Evaluation of Prospective HLA-B*13:01 Screening to Prevent Dapsone Hypersensitivity Syndrome in Patients With Leprosy. PMID:30916737
Evidence for Highly Variable, Region-Specific Patterns of T-Cell Epitope Mutations Accumulating in Mycobacterium tuberculosis Strains. PMID:30814998
Insulin autoimmune syndrome in an Argentine woman taking α-lipoic acid: A case report and review of the literature. PMID:30627435
Design and Validation of a Multiplex KIR and HLA Class I Genotyping Method Using Next Generation Sequencing. PMID:30619344
HLA-B57 micropolymorphism defines the sequence and conformational breadth of the immunopeptidome. PMID:30410026
Immune diversity sheds light on missing variation in worldwide genetic diversity panels. PMID:30365549
An Increased Frequency in HLA Class I Alleles and Haplotypes Suggests Genetic Susceptibility to Influenza A (H1N1) 2009 Pandemic: A Case-Control Study. PMID:29682588
Engineered T cells targeting E7 mediate regression of human papillomavirus cancers in a murine model. PMID:29669936
Population-level distribution and putative immunogenicity of cancer neoepitopes. PMID:29653567
Role of genetic heterogeneity in determining the epidemiological severity of H1N1 influenza. PMID:29561846
Cell-based molecularly targeted therapy: targeting oncoproteins with T cell receptor gene therapy. PMID:29528339
Applying genomics in heart transplantation. PMID:29363220
HLA class I (-A, -B, -C) and class II (-DR, -DQ) polymorphism in the Mauritanian population. PMID:29298671
The immunogenetics of neurological disease. PMID:29159928
Somatic HLA Mutations Expose the Role of Class I-Mediated Autoimmunity in Aplastic Anemia and its Clonal Complications. PMID:28971166
Association of HLA-B and HLA-DRB1 polymorphisms with antithyroid drug-induced agranulocytosis in a Han population from northern China. PMID:28931918
Mapping the human T cell repertoire to recurrent driver mutations in MYD88 and EZH2 in lymphoma. PMID:28811957
HLA haplotypes in primary sclerosing cholangitis patients of admixed and non-European ancestry. PMID:28695657
Missing or altered self: human NK cell receptors that recognize HLA-C. PMID:28695291
Brief Report: Should Abacavir Be a First-Line Alternative for Adults With HIV in Sub-Saharan Africa? PMID:28639996
Human leukocyte antigen class I (A, B and C) allele and haplotype variation in a South African Mixed ancestry population. PMID:28438553
Identification of a novel PD-L1 positive solid tumor transplantable in HLA-A*0201/DRB1*0101 transgenic mice. PMID:28430664
Computational Identification and Characterization of a Promiscuous T-Cell Epitope on the Extracellular Protein 85B of Mycobacterium spp. for Peptide-Based Subunit Vaccine Design. PMID:28401156
Bonobos Maintain Immune System Diversity with Three Functional Types of MHC-B. PMID:28348269
Is universal HLA-B*15:02 screening a cost-effective option in an ethnically diverse population? A case study of Malaysia. PMID:28346659
Genetic HLA Study of Kurds in Iraq, Iran and Tbilisi (Caucasus, Georgia): Relatedness and Medical Implications. PMID:28114347
Impact of Donor Activating KIR Genes on HSCT Outcome in C1-Ligand Negative Myeloid Disease Patients Transplanted with Unrelated Donors-A Retrospective Study. PMID:28107369
Antithyroid Drug-Induced Agranulocytosis: State of the Art on Diagnosis and Management. PMID:28105610
Shared HLA Class I and II Alleles and Clonally Restricted Public and Private Brain-Infiltrating αβ T Cells in a Cohort of Rasmussen Encephalitis Surgery Patients. PMID:28066418
The Association Between Broad Antigen HLA Mismatches, Eplet HLA Mismatches and Acute Rejection After Kidney Transplantation. PMID:27990485
Surface proteome mining for identification of potential vaccine candidates against Campylobacter jejuni: an in silico approach. PMID:27778110
Killer immunoglobulin-like receptor (KIR) and KIR-ligand genotype do not correlate with clinical outcome of renal cell carcinoma patients receiving high-dose IL2. PMID:27695964
Multi-layered Gag-specific immunodominant responses contribute to improved viral control in the CRF01_AE subtype of HIV-1-infected MSM subjects. PMID:27577610
Clustering of Anti-GBM Disease: Clues to an Environmental Trigger? PMID:27401526
Killer cell immunoglobulin-like receptor and human leukocyte antigen gene profiles in a cohort of HIV-infected Mexican Mestizos. PMID:27240860
Comparison of a New In-House and Three Published HLA-B*15:02 Screening Methods for Prevention of Carbamazepine-Induced Severe Drug Reactions. PMID:27196420
Cytomegalovirus-Infected Primary Endothelial Cells Trigger NKG2C+ Natural Killer Cells. PMID:27116381
Identification of HLA-A*11:01-restricted Mycobacterium tuberculosis CD8(+) T cell epitopes. PMID:27072810
KIR and HLA haplotype analysis in a family lacking the KIR 2DL1-2DP1 genes. PMID:26929906
Association of HLA-B*15:13 and HLA-B*15:02 with phenytoin-induced severe cutaneous adverse reactions in a Malay population. PMID:26927288
Prospects for gene-engineered T cell immunotherapy for solid cancers. PMID:26735408
Structure of a TCR-Mimic Antibody with Target Predicts Pharmacogenetics. PMID:26688548
KIR-HLA profiling shows presence of higher frequencies of strong inhibitory KIR-ligands among prognostically poor risk AML patients. PMID:26649563
Insulitis and β-Cell Mass in the Natural History of Type 1 Diabetes. PMID:26581594
Sequence conservation analysis and in silico human leukocyte antigen-peptide binding predictions for the Mtb72F and M72 tuberculosis candidate vaccine antigens. PMID:26493839
NK cell function and receptor diversity in the context of HCV infection. PMID:26483779
Distribution of cytokine gene single nucleotide polymorphisms among a multi-ethnic Iranian population. PMID:26436076
Understanding and predicting binding between human leukocyte antigens (HLAs) and peptides by network analysis. PMID:26424483
Genetics of Autoimmune Thyroiditis in Type 1 Diabetes Reveals a Novel Association With DPB1*0201: Data From the Type 1 Diabetes Genetics Consortium. PMID:26405068
A limit to the divergent allele advantage model supported by variable pathogen recognition across HLA-DRB1 allele lineages. PMID:26392055
The evolution of natural killer cell receptors. PMID:26392015
Comprehensive analysis of cancer-associated somatic mutations in class I HLA genes. PMID:26372948
Human Leukocyte Antigen Diversity: A Southern African Perspective. PMID:26347896
A Comprehensive Preclinical Model Evaluating the Recombinant PRAME Antigen Combined With the AS15 Immunostimulant to Fight Against PRAME-expressing Tumors. PMID:26325375
Loss and Gain of Natural Killer Cell Receptor Function in an African Hunter-Gatherer Population. PMID:26292085
Global Database-Driven Assessment of HIV-1 Adaptation to the Immune Repertoires of Human Populations. PMID:26246562
Association of HLA-DRB1 amino acid residues with giant cell arteritis: genetic association study, meta-analysis and geo-epidemiological investigation. PMID:26223536
Comparative investigation of respiratory tract involvement in granulomatosis with polyangiitis between PR3-ANCA positive and MPO-ANCA positive cases: a retrospective cohort study. PMID:26223225
Genetic (KIR, HLA-C) and Some Clinical Parameters Influencing the Level of Liver Enzymes and Early Virologic Response in Patients with Chronic Hepatitis C. PMID:26206121
Ebolavirus comparative genomics. PMID:26175035
Genetic determinants of antithyroid drug-induced agranulocytosis by human leukocyte antigen genotyping and genome-wide association study. PMID:26151496
KIR and HLA under pressure: evidences of coevolution across worldwide populations. PMID:26099314
Evaluation of host genetics on outcome of tuberculosis infection due to differences in killer immunoglobulin-like receptor gene frequencies and haplotypes. PMID:26077983
LB-ARHGDIB-1R as a novel minor histocompatibility antigen for therapeutic application. PMID:26069289
Poor correlation between T-cell activation assays and HLA-DR binding prediction algorithms in an immunogenic fragment of Pseudomonas exotoxin A. PMID:26056938
Association of KIR3DL1/S1 and HLA-Bw4 with CD4 T cell counts in HIV-infected Mexican mestizos. PMID:26033692
Development and validation of a sample sparing strategy for HLA typing utilizing next generation sequencing. PMID:26027778
Signature Patterns of MHC Diversity in Three Gombe Communities of Wild Chimpanzees Reflect Fitness in Reproduction and Immune Defense against SIVcpz. PMID:26020813
Systematic transcriptome analysis reveals tumor-specific isoforms for ovarian cancer diagnosis and therapy. PMID:26015570
HLA-DRB1 and HLA-DQB1 Are Associated with Adult-Onset Immunodeficiency with Acquired Anti-Interferon-Gamma Autoantibodies. PMID:26011559
Organ donor specimens: What can they tell us about type 1 diabetes? PMID:25998576
Altered HLA Class I Profile Associated with Type A/D Nucleophosmin Mutation Points to Possible Anti-Nucleophosmin Immune Response in Acute Myeloid Leukemia. PMID:25992555
Prevalence of celiac disease in latin america: a systematic review and meta-regression. PMID:25942408
HLA-B*59:01: a marker for Stevens-Johnson syndrome/toxic epidermal necrolysis caused by methazolamide in Han Chinese. PMID:25918017
HLAreporter: a tool for HLA typing from next generation sequencing data. PMID:25908942
Characterization of the immunophenotypes and antigenomes of colorectal cancers reveals distinct tumor escape mechanisms and novel targets for immunotherapy. PMID:25853550
Conserved epitopes on HIV-1, FIV and SIV p24 proteins are recognized by HIV-1 infected subjects. PMID:25844718
Determination of HLA-A, -C, -B, -DRB1 allele and haplotype frequency in Japanese population based on family study. PMID:25789826
Molecular docking to identify associations between drugs and class I human leukocyte antigens for predicting idiosyncratic drug reactions. PMID:25747444
KIR2DS5 in the presence of HLA-C C2 protects against endometriosis. PMID:25724317
Biological databases for human research. PMID:25712261
Covariation of the incidence of type 1 diabetes with country characteristics available in public databases. PMID:25706995
Genetic diversity of the KIR/HLA system and susceptibility to hepatitis C virus-related diseases. PMID:25700262
Multiplex genotyping of cytokine gene SNPs using fluorescence bead array. PMID:25689696
Modeling HLA associations with EBV-positive and -negative Hodgkin lymphoma suggests distinct mechanisms in disease pathogenesis. PMID:25648508
PharmGKB summary: very important pharmacogene information for human leukocyte antigen B. PMID:25647431
Human leukocyte antigen class I and class II alleles are associated with susceptibility and resistance in borderline leprosy patients from Southeast Brazil. PMID:25605482
Allele frequencies database. PMID:25538537
Partial pathogen protection by tick-bite sensitization and epitope recognition in peptide-immunized HLA DR3 transgenic mice. PMID:25517089
Grouping of large populations into few CTL immune 'response-types' from influenza H1N1 genome analysis. PMID:25505972
Novel insights in the genomic organization and hotspots of recombination in the human KIR locus through analysis of intergenic regions. PMID:25503311
Cell-surface MHC density profiling reveals instability of autoimmunity-associated HLA. PMID:25485681
Allele frequency net 2015 update: new features for HLA epitopes, KIR and disease and HLA adverse drug reaction associations. PMID:25414323
Host genetic factors associated with symptomatic primary HIV infection and disease progression among Argentinean seroconverters. PMID:25406087
NK cell genotype and phenotype at diagnosis of acute lymphoblastic leukemia correlate with postinduction residual disease. PMID:25281696
Global distribution of malaria-resistant MHC-HLA alleles: the number and frequencies of alleles and malaria risk. PMID:25187124
A fault-tolerant method for HLA typing with PacBio data. PMID:25183223
OptiType: precision HLA typing from next-generation sequencing data. PMID:25143287
KIR diversity in Māori and Polynesians: populations in which HLA-B is not a significant KIR ligand. PMID:25139336
Designing peptide-based HIV vaccine for Chinese. PMID:25136573
The relevance of HLA sequencing in population genetics studies. PMID:25126587
A distinct immunogenic region of glutamic acid decarboxylase 65 is naturally processed and presented by human islet cells to cytotoxic CD8 T cells. PMID:25112375
Presence of the full-length KIR2DS4 gene reduces the chance of rheumatoid arthritis patients to respond to methotrexate treatment. PMID:25069714
Increased frequency and function of KIR2DL1-3⁺ NK cells in primary HIV-1 infection are determined by HLA-C group haplotypes. PMID:25043727
Clinical features of narcolepsy in children vaccinated with AS03 adjuvanted pandemic A/H1N1 2009 influenza vaccine in England. PMID:25041214
Two new cases of KIR3DP1, KIR2DL4-negative genotypes, one of which is also lacking KIR3DL2. PMID:25033772
KIR-associated protection from CMV replication requires pre-existing immunity: a prospective study in solid organ transplant recipients. PMID:25008861
Common subclinical hypothyroidism during Whipple's disease. PMID:24996424
A search for novel cancer/testis antigens in lung cancer identifies VCX/Y genes, expanding the repertoire of potential immunotherapeutic targets. PMID:24970476
Class II human leucocyte antigen DRB1*11 in hairy cell leukaemia patients with and without haemolytic uraemic syndrome. PMID:24931452
Diversity of killer cell immunoglobulin-like receptor (KIR) genotypes and KIR2DL2/3 variants in HCV treatment outcome. PMID:24927414
Short communication: HIV-1 Nef protein carries multiple epitopes suitable for induction of cellular immunity for an HIV vaccine in Africa. PMID:24866397
Anti-HLA alloantibodies in surgical patients refractory to platelet transfusion. PMID:24816643
Associations of HLA-A, HLA-B and HLA-C alleles frequency with prevalence of herpes simplex virus infections and diseases across global populations: implication for the development of an universal CD8+ T-cell epitope-based vaccine. PMID:24798939
Nonsynonymous substitution rate heterogeneity in the peptide-binding region among different HLA-DRB1 lineages in humans. PMID:24793785
Frequency of alleles and haplotypes of the human leukocyte antigen system in Bauru, São Paulo, Brazil. PMID:24790535
Cost-effectiveness analysis of HLA-B*5801 testing in preventing allopurinol-induced SJS/TEN in Thai population. PMID:24732692
Flow cytometry test to screen for HLA-B*58:01-associated allopurinol hypersensitivity. PMID:24728879
HIV-1 adaptation to antigen processing results in population-level immune evasion and affects subtype diversification. PMID:24726370
A hybrid qPCR/SNP array approach allows cost efficient assessment of KIR gene copy numbers in large samples. PMID:24720548
Association of the HLA-B*52 allele with non-progression to AIDS in Brazilian HIV-1-infected individuals. PMID:24718028
Clinical and immunological markers of dengue progression in a study cohort from a hyperendemic area in Malaysia. PMID:24647042
Mutational and structural analysis of KIR3DL1 reveals a lineage-defining allotypic dimorphism that impacts both HLA and peptide sensitivity. PMID:24563253
Pharmacogenomic testing for neuropsychiatric drugs: current status of drug labeling, guidelines for using genetic information, and test options. PMID:24523097
Genetic diversity of the KIR/HLA system and outcome of patients with metastatic colorectal cancer treated with chemotherapy. PMID:24497922
Co-occurrence of anaerobic bacteria in colorectal carcinomas. PMID:24450771
HLA-DRB1 and HLA-DQB1 allele associations in an Albanian patient population with rheumatoid arthritis: correlations with the specific autoantibody markers and inter-population DRB1 allele frequency variability. PMID:24381092
Exploiting the curative potential of adoptive T-cell therapy for cancer. PMID:24329789
Effects of highly conserved major histocompatibility complex (MHC) extended haplotypes on iron and low CD8+ T lymphocyte phenotypes in HFE C282Y homozygous hemochromatosis patients from three geographically distant areas. PMID:24282517
Diversity of extended HLA-DRB1 haplotypes in the Finnish population. PMID:24278156
HLA typing from 1000 genomes whole genome and whole exome illumina data. PMID:24223151
Co-evolution of human leukocyte antigen (HLA) class I ligands with killer-cell immunoglobulin-like receptors (KIR) in a genetically diverse population of sub-Saharan Africans. PMID:24204327
Presence of more activating KIR genes is associated with Hashimoto's thyroiditis. PMID:24174177
HLA class I and class II conserved extended haplotypes and their fragments or blocks in Mexicans: implications for the study of genetic diversity in admixed populations. PMID:24086347
Regional HLA differences in Poland and their effect on stem cell donor registry planning. PMID:24069237
Human leukocyte antigen alleles, genotypes and haplotypes frequencies in renal transplant donors and recipients from West Central India. PMID:24019626
Immunoinformatic docking approach for the analysis of KIR3DL1/HLA-B interaction. PMID:23984333
Killer cell immunoglobulin-like receptor (KIR) genes and their HLA-C ligands in a Ugandan population. PMID:23974321
HLA in Georgians (Caucasus) and their relationship with Eastern Mediterraneans. PMID:23959809
Associations between human leukocyte antigen class I variants and the Mycobacterium tuberculosis subtypes causing disease. PMID:23945374
HLA-DPB1*04:01 allele is associated with non-obstructive azoospermia in Japanese patients. PMID:23934009
Increased expression of intrinsic antiviral genes in HLA-B*57-positive individuals. PMID:23929683
NetMHCIIpan-3.0, a common pan-specific MHC class II prediction method including all three human MHC class II isotypes, HLA-DR, HLA-DP and HLA-DQ. PMID:23900783
Extensive variation in gene copy number at the killer immunoglobulin-like receptor locus in humans. PMID:23840750
Association between HLA alleles and HAM/TSP in individuals infected with HTLV-1. PMID:23835632
Polymorphisms of killer immunoglobulin-like receptors (KIRs) and HLA ligands in northeastern Thais. PMID:23812166
HLA genetic profile of Mapuche (Araucanian) Amerindians from Chile. PMID:23666052
HLA-restricted NY-ESO-1 peptide immunotherapy for metastatic castration resistant prostate cancer. PMID:23609828
HLA-A 31:01 and HLA-B 15:02 as genetic markers for carbamazepine hypersensitivity in children. PMID:23588310
A database for curating the associations between killer cell immunoglobulin-like receptors and diseases in worldwide populations. PMID:23584834
Detection of ancestry informative HLA alleles confirms the admixed origins of Japanese population. PMID:23577161
Association of killer cell immunoglobulin-like receptor polymorphisms with chronic hepatitis C and responses to therapy in Brazil. PMID:23569404
Influence of HLA-C expression level on HIV control. PMID:23559252
Synthetic immunotherapy induces HIV virus specific Th1 cytotoxic response and death of an HIV-1 infected human cell line through classic complement activation. PMID:23557359
A small set of succinct signature patterns distinguishes Chinese and non-Chinese HIV-1 genomes. PMID:23527028
A method for killer-cell immunoglobulin-like receptor (KIR) 3DL1/3DS1 genotyping using DNA recovered from frozen plasma. PMID:23524032
Translating HIV sequences into quantitative fitness landscapes predicts viral vulnerabilities for rational immunogen design. PMID:23521886
Common and well-documented HLA alleles: 2012 update to the CWD catalogue. PMID:23510415
KIR gene content in amerindians indicates influence of demographic factors. PMID:23451080
Minor histocompatibility antigens and the maternal immune response to the fetus during pregnancy. PMID:23398025
Killer cell immunoglobulin-like receptor gene associations with autoimmune and allergic diseases, recurrent spontaneous abortion, and neoplasms. PMID:23372569
16(th) IHIW: population global distribution of killer immunoglobulin-like receptor (KIR) and ligands. PMID:23280119
HLA typing from RNA-Seq sequence reads. PMID:23259685
IL1B, IL4R, IL12RB1 and TNF gene polymorphisms are associated with Plasmodium vivax malaria in Brazil. PMID:23217179
Human leukocyte antigen profiles of latin american populations: differential admixture and its potential impact on hematopoietic stem cell transplantation. PMID:23213535
Identification and elimination of an immunodominant T-cell epitope in recombinant immunotoxins based on Pseudomonas exotoxin A. PMID:23213206
Protective antibody and CD8+ T-cell responses to the Plasmodium falciparum circumsporozoite protein induced by a nanoparticle vaccine. PMID:23144750
HLA-DRB1 alleles are associated with the susceptibility to sporadic Parkinson's disease in Chinese Han population. PMID:23139797
Characterization of T-cell receptors directed against HLA-A*01-restricted and C*07-restricted epitopes of MAGE-A3 and MAGE-A12. PMID:23090077
A sequence-based approach demonstrates that balancing selection in classical human leukocyte antigen (HLA) loci is asymmetric. PMID:23065702
KIR2DL5: An Orphan Inhibitory Receptor Displaying Complex Patterns of Polymorphism and Expression. PMID:23060877
Evolutionary analysis of classical HLA class I and II genes suggests that recent positive selection acted on DPB1*04:01 in Japanese population. PMID:23056460
Mechanisms of action underlying the immunotherapeutic activity of Allovectin in advanced melanoma. PMID:23037806
Natural selection on marine carnivores elaborated a diverse family of classical MHC class I genes exhibiting haplotypic gene content variation and allelic polymorphism. PMID:23001684
Temporal association of HLA-B*81:01- and HLA-B*39:10-mediated HIV-1 p24 sequence evolution with disease progression. PMID:22933291
T cell receptor-like recognition of tumor in vivo by synthetic antibody fragment. PMID:22916301
Genetic Kinship Investigation from Blood Groups to DNA Markers. PMID:22851931
The heterogeneous HLA genetic makeup of the Swiss population. PMID:22848484
Comparison of the predicted population coverage of tuberculosis vaccine candidates Ag85B-ESAT-6, Ag85B-TB10.4, and Mtb72f via a bioinformatics approach. PMID:22815851
Mutation at positively selected positions in the binding site for HLA-C shows that KIR2DL1 is a more refined but less adaptable NK cell receptor than KIR2DL3. PMID:22772445
Prediction of HLA class II alleles using SNPs in an African population. PMID:22761960
In silico analysis of HLA associations with drug-induced liver injury: use of a HLA-genotyped DNA archive from healthy volunteers. PMID:22732016
Adaptive evolution of HIV at HLA epitopes is associated with ethnicity in Canada. PMID:22693560
Killer-cell immunoglobulin-like receptors (KIR) in severe A (H1N1) 2009 influenza infections. PMID:22652695
Influence of HLA-DRB1 and HLA-DQB1 alleles on IgG antibody response to the P. vivax MSP-1, MSP-3α and MSP-9 in individuals from Brazilian endemic area. PMID:22649493
Allelic diversity at the DLA-88 locus in Golden Retriever and Boxer breeds is limited. PMID:22571293
Strategies to work with HLA data in human populations for histocompatibility, clinical transplantation, epidemiology and population genetics: HLA-NET methodological recommendations. PMID:22533604
AS03 adjuvanted AH1N1 vaccine associated with an abrupt increase in the incidence of childhood narcolepsy in Finland. PMID:22470453
Significant association of KIR2DL3-HLA-C1 combination with cerebral malaria and implications for co-evolution of KIR and HLA. PMID:22412373
Development of a humanized HLA-A2.1/DP4 transgenic mouse model and the use of this model to map HLA-DP4-restricted epitopes of HBV envelope protein. PMID:22403638
Genome-wide mapping for clinically relevant predictors of lamotrigine- and phenytoin-induced hypersensitivity reactions. PMID:22379998
Tracking human migrations by the analysis of the distribution of HLA alleles, lineages and haplotypes in closed and open populations. PMID:22312049
Human-specific evolution of killer cell immunoglobulin-like receptor recognition of major histocompatibility complex class I molecules. PMID:22312047
Killer-cell immunoglobulin-like receptors and malaria caused by Plasmodium falciparum in The Gambia. PMID:22220719
Enrichment of variations in KIR3DL1/S1 and KIR2DL2/L3 among H1N1/09 ICU patients: an exploratory study. PMID:22216211
DRB1*12:01 presents a unique subset of epitopes by preferring aromatics in pocket 9. PMID:22196942
Association of systemic lupus erythematosus clinical features with European population genetic substructure. PMID:22194982
Review: Immunogenetics of human placentation. PMID:22177321
Predictions versus high-throughput experiments in T-cell epitope discovery: competition or synergy? PMID:22149708
T cells and pathogenesis of hantavirus cardiopulmonary syndrome and hemorrhagic fever with renal syndrome. PMID:21994770
KIR genotypic diversity can track ancestries in heterogeneous populations: a potential confounder for disease association studies. PMID:21898189
The shaping of modern human immune systems by multiregional admixture with archaic humans. PMID:21868630
Diversity of the KIR gene cluster in an urban Brazilian population. PMID:21850526
A role for systems epidemiology in tuberculosis research. PMID:21831640
Engineering T cells specific for a dominant severe acute respiratory syndrome coronavirus CD8 T cell epitope. PMID:21813600
Killer-cell immunoglobulin-like receptor genotyping and HLA killer-cell immunoglobulin-like receptor-ligand identification by real-time polymerase chain reaction. PMID:21810083
Variable NK cell receptors exemplified by human KIR3DL1/S1. PMID:21690332
Toxicogenomics of nevirapine-associated cutaneous and hepatic adverse events among populations of African, Asian, and European descent. PMID:21505298
Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools PubMed citations: 150.

150 articles citing: Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools

Mouse fetal growth restriction through parental and fetal immune gene variation and intercellular communications cascade. PMID:35906236
The T Cell Epitope Landscape of SARS-CoV-2 Variants of Concern. PMID:35891287
Peptidome Surveillance Across Evolving SARS-CoV-2 Lineages Reveals HLA Binding Conservation in Nucleocapsid Among Variants With Most Potential for T-Cell Epitope Loss in Spike. PMID:35812370
The Accuracy of Sequence-Specific Oligonucleotide and Real-Time Polymerase Chain Reaction HLA Typing in Determining the Presence of Pre-Transplant Donor-Specific Anti-HLA Antibodies and Total Eplet Mismatches for Deceased Donor Kidney Transplantation. PMID:35799779
Contribution of HLA and KIR Alleles to Systemic Sclerosis Susceptibility and Immunological and Clinical Disease Subtypes. PMID:35754823
SM-COLSARSPROT: Highly Immunogenic Supramutational Synthetic Peptides Covering the World's Population. PMID:35693819
Identification of vaccine targets & design of vaccine against SARS-CoV-2 coronavirus using computational and deep learning-based approaches. PMID:35611169
T Cell Epitope Discovery in the Context of Distinct and Unique Indigenous HLA Profiles. PMID:35603215
Characterizing the diversity of MHC conserved extended haplotypes using families from the United Arab Emirates. PMID:35504942
Alterations in SARS-CoV-2 Omicron and Delta peptides presentation by HLA molecules. PMID:35502206
Human herpesvirus diversity is altered in HLA class I binding peptides. PMID:35486690
Immunogenicity and therapeutic targeting of a public neoantigen derived from mutated PIK3CA. PMID:35484264
Strategies for Success With Umbilical Cord Haematopoietic Stem Cell Transplantation in Children With Malignant and Non-Malignant Disease Indications. PMID:35465327
Antibody-mediated delivery of a viral MHC-I epitope into the cytosol of target tumor cells repurposes virus-specific CD8+ T cells for cancer immunotherapy. PMID:35459256
Development of a Universal Epitope-Based Influenza Vaccine and Evaluation of Its Effectiveness in Mice. PMID:35455283
Efficient targeting of NY-ESO-1 tumor antigen to human cDC1s by lymphotactin results in cross-presentation and antigen-specific T cell expansion. PMID:35428705
Sex, Age, and Ethnic Background Shape Adaptive Immune Responses Induced by the SARS-CoV-2 mRNA Vaccine. PMID:35418996
A Case of Methimazole-Induced Acute Pancreatitis With an HLA Allele Causing Antithyroid Drug-Induced Agranulocytosis. PMID:35402762
Phase 1 Clinical Trial Evaluating the Safety and Anti-Tumor Activity of ADP-A2M10 SPEAR T-Cells in Patients With MAGE-A10+ Head and Neck, Melanoma, or Urothelial Tumors. PMID:35372008
HLA-B*13, B*35 and B*39 Alleles Are Closely Associated With the Lack of Response to ART in HIV Infection: A Cohort Study in a Population of Northern Brazil. PMID:35371095
Pharmacogenomic landscape of Indian population using whole genomes. PMID:35338580
Cancer Therapy With TCR-Engineered T Cells: Current Strategies, Challenges, and Prospects. PMID:35309357
Allelic variation in HLA-DRB1 is associated with development of antidrug antibodies in cancer patients treated with atezolizumab that are neutralizing in vitro. PMID:35263013
Upstream open reading frames regulate translation of cancer-associated transcripts and encode HLA-presented immunogenic tumor antigens. PMID:35239002
Differential T cell immune responses to deamidated adeno-associated virus vector. PMID:35211638
Peptide-Based Vaccines for Tuberculosis. PMID:35173740
HLA-B*07:02 and HLA-C*07:02 are associated with trimethoprim-sulfamethoxazole respiratory failure. PMID:35169303
Predicted impact of the viral mutational landscape on the cytotoxic response against SARS-CoV-2. PMID:35143484
Evidence of a SARS-CoV-2 double Spike mutation D614G/S939F potentially affecting immune response of infected subjects. PMID:35096288
Trans-ancestral fine-mapping of MHC reveals key amino acids associated with spontaneous clearance of hepatitis C in HLA-DQβ1. PMID:35090584
Genotyping for HLA Risk Alleles to Prevent Drug Hypersensitivity Reactions: Impact Analysis. PMID:35056062
Immunoinformatics prediction of potential immunodominant epitopes from human coronaviruses and association with autoimmunity. PMID:35006282
HLA-A∗03:01 is associated with increased risk of fever, chills, and stronger side effects from Pfizer-BioNTech COVID-19 vaccination. PMID:35005651
HLA-SPREAD: a natural language processing based resource for curating HLA association from PubMed abstracts. PMID:34991484
The SARS-CoV-2 Lambda variant exhibits enhanced infectivity and immune resistance. PMID:34968415
Immunoinformatics Analysis of SARS-CoV-2 ORF1ab Polyproteins to Identify Promiscuous and Highly Conserved T-Cell Epitopes to Formulate Vaccine for Indonesia and the World Population. PMID:34960205
Identification of HLA-A*24:02-Restricted CTL Candidate Epitopes Derived from the Nonstructural Polyprotein 1a of SARS-CoV-2 and Analysis of Their Conservation Using the Mutation Database of SARS-CoV-2 Variants. PMID:34937174
EpiCurator: an immunoinformatic workflow to predict and prioritize SARS-CoV-2 epitopes. PMID:34909278
A Model of Minor Histocompatibility Antigens in Allogeneic Hematopoietic Cell Transplantation. PMID:34868058
In Silico Model Estimates the Clinical Trial Outcome of Cancer Vaccines. PMID:34831269
Screening HLA-A-restricted T cell epitopes of SARS-CoV-2 and the induction of CD8+ T cell responses in HLA-A transgenic mice. PMID:34728796
HLA alleles measured from COVID-19 patient transcriptomes reveal associations with disease prognosis in a New York cohort. PMID:34722002
Rapid Near Point-of-Care Assay for HLA-B*57:01 Genotype Associated with Severe Hypersensitivity Reaction to Abacavir. PMID:34714103
Sarcoidosis Following Hematopoietic Stem Cell Transplantation: Clinical Characteristics and HLA Associations. PMID:34691055
Vaccines for Non-Viral Cancer Prevention. PMID:34681560
Targeting public neoantigens for cancer immunotherapy. PMID:34676374
Prevalence of anti-platelet factor 4/polyanionic antibodies after COVID-19 vaccination with ChAdOx1 nCoV-19 and CoronaVac in Thais. PMID:34667921
Identification of conserved SARS-CoV-2 spike epitopes that expand public cTfh clonotypes in mild COVID-19 patients. PMID:34647971
Development of synthetic antigen vaccines for COVID-19. PMID:34613880
A high-resolution HLA reference panel capturing global population diversity enables multi-ancestry fine-mapping in HIV host response. PMID:34611364
EpiSurf: metadata-driven search server for analyzing amino acid changes within epitopes of SARS-CoV-2 and other viral species. PMID:34585726
Does immune recognition of SARS-CoV2 epitopes vary between different ethnic groups? PMID:34560183
From Infection to Immunity: Understanding the Response to SARS-CoV2 Through In-Silico Modeling. PMID:34557181
The First Chemically-Synthesised, Highly Immunogenic Anti-SARS-CoV-2 Peptides in DNA Genotyped Aotus Monkeys for Human Use. PMID:34539660
Broadly directed SARS-CoV-2-specific CD4+ T cell response includes frequently detected peptide specificities within the membrane and nucleoprotein in patients with acute and resolved COVID-19. PMID:34529740
Exome Sequencing Reveals a Putative Role for HLA-C*03:02 in Control of HIV-1 in African Pediatric Populations. PMID:34512729
Major Insights in Dynamics of Host Response to SARS-CoV-2: Impacts and Challenges. PMID:34512561
Profiling CD8+ T cell epitopes of COVID-19 convalescents reveals reduced cellular immune responses to SARS-CoV-2 variants. PMID:34506741
Tumor Infiltrating Lymphocytes Target HLA-I Phosphopeptides Derived From Cancer Signaling in Colorectal Cancer. PMID:34504498
HLA-DRB1 and HLA-DQB1 genetic diversity modulates response to lithium in bipolar affective disorders. PMID:34497278
PopCover-2.0. Improved Selection of Peptide Sets With Optimal HLA and Pathogen Diversity Coverage. PMID:34484239
Challenges for the standardized reporting of NGS HLA genotyping: Surveying gaps between clinical and research laboratories. PMID:34479742
Virus-Induced CD8+ T-Cell Immunity and Its Exploitation to Contain the SARS-CoV-2 Pandemic. PMID:34452047
An immunogenetic view of COVID-19. PMID:34436508
Allotype-Specific Glycosylation and Cellular Localization of Human Leukocyte Antigen Class I Proteins. PMID:34415762
Heterogeneity of Genetic Admixture Determines SLE Susceptibility in Mexican. PMID:34413879
T-CoV: a comprehensive portal of HLA-peptide interactions affected by SARS-CoV-2 mutations. PMID:34396391
Bioinformatics Prediction of SARS-CoV-2 Epitopes as Vaccine Candidates for the Colombian Population. PMID:34358213
Natural killer-cell immunoglobulin-like receptors trigger differences in immune response to SARS-CoV-2 infection. PMID:34352002
Ancient DNA Study in Medieval Europeans Shows an Association Between HLA-DRB1*03 and Paratyphoid Fever. PMID:34335597
SARS-CoV-2 specific memory T cell epitopes identified in COVID-19-recovered subjects. PMID:34329696
Autoimmune encephalitis: the first observational study from Iran. PMID:34328580
Haplotypic Associations and Differentiation of MHC Class II Polymorphic Alu Insertions at Five Loci With HLA-DRB1 Alleles in 12 Minority Ethnic Populations in China. PMID:34305999
HLA B53 is associated with a poor outcome in black COVID-19 patients. PMID:34303556
Rheumatoid Arthritis Susceptibility Is Associated with the KIR2DS4-Full of Killer-Cell Immunoglobulin-Like Receptor Genes in the Lur Population of Iran. PMID:34277872
A Peptide Vaccine Candidate Tailored to Individuals' Genetics Mimics the Multi-Targeted T Cell Immunity of COVID-19 Convalescent Subjects. PMID:34249101
SARS-CoV-2 human T cell epitopes: Adaptive immune response against COVID-19. PMID:34237248
MiDAS-Meaningful Immunogenetic Data at Scale. PMID:34228721
Novel mumps virus epitopes reveal robust cytotoxic T cell responses after natural infection but not after vaccination. PMID:34211021
Novel Antivirals in Clinical Development for Chronic Hepatitis B Infection. PMID:34207458
SARS-CoV-2 spike L452R variant evades cellular immunity and increases infectivity. PMID:34171266
On Path to Informing Hierarchy of Eplet Mismatches as Determinants of Kidney Transplant Loss. PMID:34169197
Landscape and selection of vaccine epitopes in SARS-CoV-2. PMID:34127050
Scientific opinion on the relationship between intake of alpha-lipoic acid (thioctic acid) and the risk of insulin autoimmune syndrome. PMID:34122657
Following Transplantation for Acute Myelogenous Leukemia, Donor KIR Cen B02 Better Protects against Relapse than KIR Cen B01. PMID:34117109
Antigenic Evolution on a Global Scale Reveals the Potential Natural Selection of Severe Acute Respiratory Syndrome-Coronavirus 2 by Pre-existing Cross-Reactive T-Cell Immunity. PMID:34093454
HLA Alleles and Prognosis of PLA2R-Related Membranous Nephropathy. PMID:34083219
Proteome-wide analysis of Coxiella burnetii for conserved T-cell epitopes with presentation across multiple host species. PMID:34078271
Nationwide Study of Drug Resistance Mutations in HIV-1 Infected Individuals under Antiretroviral Therapy in Brazil. PMID:34069929
Most Japanese individuals are genetically predisposed to recognize an immunogenic protein fragment shared between COVID-19 and common cold coronaviruses. PMID:34026045
High-Resolution Characterization of KIR Genes in a Large North American Cohort Reveals Novel Details of Structural and Sequence Diversity. PMID:34025673
A machine learning prediction model for waiting time to kidney transplant. PMID:34015020
Identification of two novel bullous pemphigoid- associated alleles, HLA-DQA1*05:05 and -DRB1*07:01, in Germans. PMID:34011352
High-Resolution Analysis Identifies High Frequency of KIR-A Haplotypes and Inhibitory Interactions of KIR With HLA Class I in Zhejiang Han. PMID:33995358
Risk HLA alleles in South America and potential new epitopes for SARS-CoV2. PMID:33972137
HLA-A*11:01:01:01, HLA-C*12:02:02:01-HLA-B*52:01:02:02, Age and Sex Are Associated With Severity of Japanese COVID-19 With Respiratory Failure. PMID:33968060
CD8+ T cells specific for an immunodominant SARS-CoV-2 nucleocapsid epitope display high naive precursor frequency and TCR promiscuity. PMID:33951417
CD8+ T cells specific for an immunodominant SARS-CoV-2 nucleocapsid epitope cross-react with selective seasonal coronaviruses. PMID:33945786
NEPdb: A Database of T-Cell Experimentally-Validated Neoantigens and Pan-Cancer Predicted Neoepitopes for Cancer Immunotherapy. PMID:33927717
The influence of HLA genotype on the severity of COVID-19 infection. PMID:33896121
Next generation sequencing for HLA loci in full heritage Pima Indians of Arizona, Part II: HLA-A, -B, and -C with selected non-classical loci at 4-field resolution from whole genome sequences. PMID:33875299
Genetics Insight for COVID-19 Susceptibility and Severity: A Review. PMID:33868239
Genetic variability in COVID-19-related genes in the Brazilian population. PMID:33824725
HLA Alleles B*53:01 and C*06:02 Are Associated With Higher Risk of P. falciparum Parasitemia in a Cohort in Uganda. PMID:33815410
Population-Predicted MHC Class II Epitope Presentation of SARS-CoV-2 Structural Proteins Correlates to the Case Fatality Rates of COVID-19 in Different Countries. PMID:33807854
Novel Combinatorial Approaches to Tackle the Immunosuppressive Microenvironment of Prostate Cancer. PMID:33800156
RNA2HLA: HLA-based quality control of RNA-seq datasets. PMID:33758920
Rational discovery of a cancer neoepitope harboring the KRAS G12D driver mutation. PMID:33740187
Local adaptation in populations of Mycobacterium tuberculosis endemic to the Indian Ocean Rim. PMID:33732436
A Proteome-Wide Immunoinformatics Tool to Accelerate T-Cell Epitope Discovery and Vaccine Design in the Context of Emerging Infectious Diseases: An Ethnicity-Oriented Approach. PMID:33717077
Vaccines: Underlying Principles of Design and Testing. PMID:33705574
Role of the Host Genetic Susceptibility to 2009 Pandemic Influenza A H1N1. PMID:33671828
Rational Design of a Pan-Coronavirus Vaccine Based on Conserved CTL Epitopes. PMID:33670023
SARS-CoV-2 mutations in MHC-I-restricted epitopes evade CD8+ T cell responses. PMID:33664060
HLA binding of self-peptides is biased towards proteins with specific molecular functions. PMID:33619495
HLA diversity in the Argentinian Umbilical Cord Blood Bank: frequencies according to donor's reported ancestry and geographical distribution. PMID:33602993
Genetic determinants of risk in autoimmune pulmonary alveolar proteinosis. PMID:33589587
Common Denominators in the Immunobiology of IgG4 Autoimmune Diseases: What Do Glomerulonephritis, Pemphigus Vulgaris, Myasthenia Gravis, Thrombotic Thrombocytopenic Purpura and Autoimmune Encephalitis Have in Common? PMID:33584677
Current and prospective computational approaches and challenges for developing COVID-19 vaccines. PMID:33561453
Comprehensive analysis of T cell immunodominance and immunoprevalence of SARS-CoV-2 epitopes in COVID-19 cases. PMID:33521695
HLA, Immune Response, and Susceptibility to COVID-19. PMID:33488597
Modified recombinant human erythropoietin with potentially reduced immunogenicity. PMID:33452310
Class I HLA Allele Predicted Restricted Antigenic Coverages for Spike and Nucleocapsid Proteins Are Associated With Deaths Related to COVID-19. PMID:33391255
Design of a companion bioinformatic tool to detect the emergence and geographical distribution of SARS-CoV-2 Spike protein genetic variants. PMID:33380328
Identification of Immunological Parameters as Predictive Biomarkers of Relapse in Patients with Chronic Myeloid Leukemia on Treatment-Free Remission. PMID:33375572
Artificial intelligence predicts the immunogenic landscape of SARS-CoV-2 leading to universal blueprints for vaccine designs. PMID:33361777
Population Difference in Allele Frequency of HLA-C*05 and Its Correlation with COVID-19 Mortality. PMID:33233780
Association of HLA-B22 serotype with SARS-CoV-2 susceptibility in Hong Kong Chinese patients. PMID:33179437
PTSD is associated with increased DNA methylation across regions of HLA-DPB1 and SPATC1L. PMID:33152445
Epitope similarity cannot explain the pre-formed T cell immunity towards structural SARS-CoV-2 proteins. PMID:33149224
Treatment- and population-specific genetic risk factors for anti-drug antibodies against interferon-beta: a GWAS. PMID:33143745
Retrospective in silico HLA predictions from COVID-19 patients reveal alleles associated with disease prognosis. PMID:33140057
Epitope prediction and identification- adaptive T cell responses in humans. PMID:33131981
Unbiased Screens Show CD8+ T Cells of COVID-19 Patients Recognize Shared Epitopes in SARS-CoV-2 that Largely Reside outside the Spike Protein. PMID:33128877
CAR-T cells and TRUCKs that recognize an EBNA-3C-derived epitope presented on HLA-B*35 control Epstein-Barr virus-associated lymphoproliferation. PMID:33127653
The landscape of host genetic factors involved in immune response to common viral infections. PMID:33109261
Projected Utility of Pharmacogenomic Testing Among Individuals Hospitalized With COVID-19: A Retrospective Multicenter Study in the United States. PMID:33085221
Novel insights in the genetics of steroid-sensitive nephrotic syndrome in childhood. PMID:33084934
Diagnostic Test Criteria for HLA Genotyping to Prevent Drug Hypersensitivity Reactions: A Systematic Review of Actionable HLA Recommendations in CPIC and DPWG Guidelines. PMID:33071783
Specific Class I HLA Supertypes but Not HLA Zygosity or Expression Are Associated with Outcomes following HLA-Matched Allogeneic Hematopoietic Cell Transplant: HLA Supertypes Impact Allogeneic HCT Outcomes. PMID:33053450
The Genetic Mechanisms Driving Diversification of the KIR Gene Cluster in Primates. PMID:33013938
Identification of Novel Candidate Epitopes on SARS-CoV-2 Proteins for South America: A Review of HLA Frequencies by Country. PMID:33013857
A bioinformatic prediction of antigen presentation from SARS-CoV-2 spike protein revealed a theoretical correlation of HLA-DRB1*01 with COVID-19 fatality in Mexican population: An ecological approach. PMID:32986250
Magnitude and Dynamics of the T-Cell Response to SARS-CoV-2 Infection at Both Individual and Population Levels. PMID:32793919
Clinical Pharmacogenetics Implementation Consortium (CPIC) Guideline for CYP2C9 and HLA-B Genotypes and Phenytoin Dosing: 2020 Update. PMID:32779747
Immunoinformatic approach to assess SARS-CoV-2 protein S epitopes recognised by the most frequent MHC-I alleles in the Brazilian population. PMID:32759312
SARS-CoV-2 genomic variations associated with mortality rate of COVID-19. PMID:32699345
The landscape of host genetic factors involved in immune response to common viral infections. PMID:32511533
Prioritization of SARS-CoV-2 epitopes using a pan-HLA and global population inference approach. PMID:32511325
The 27th annual Nucleic Acids Research database issue and molecular biology database collection. PMID:31906604
http://dx.doi.org/10.1093/nar/gku1166

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allele
metasource: Fairsharing.org
version: FAIRsharing.org: AFND; Allele Frequency Net Database; DOI: https://doi.org/10.25504/FAIRsharing.2cfr4z; Last edited: March 17, 2021, 2:12 p.m.; Last accessed: Jan 03 2022 7:06 p.m.

allele frequency
metasource: Fairsharing.org
version: FAIRsharing.org: AFND; Allele Frequency Net Database; DOI: https://doi.org/10.25504/FAIRsharing.2cfr4z; Last edited: March 17, 2021, 2:12 p.m.; Last accessed: Jan 03 2022 7:06 p.m.

deoxyribonucleic acid
metasource: Fairsharing.org
version: FAIRsharing.org: AFND; Allele Frequency Net Database; DOI: https://doi.org/10.25504/FAIRsharing.2cfr4z; Last edited: March 17, 2021, 2:12 p.m.; Last accessed: Jan 03 2022 7:06 p.m.

genetic polymorphism
metasource: Fairsharing.org
version: FAIRsharing.org: AFND; Allele Frequency Net Database; DOI: https://doi.org/10.25504/FAIRsharing.2cfr4z; Last edited: March 17, 2021, 2:12 p.m.; Last accessed: Jan 03 2022 7:06 p.m.

genotype
metasource: Fairsharing.org
version: FAIRsharing.org: AFND; Allele Frequency Net Database; DOI: https://doi.org/10.25504/FAIRsharing.2cfr4z; Last edited: March 17, 2021, 2:12 p.m.; Last accessed: Jan 03 2022 7:06 p.m.

human leukocyte antigen complex
metasource: Fairsharing.org
version: FAIRsharing.org: AFND; Allele Frequency Net Database; DOI: https://doi.org/10.25504/FAIRsharing.2cfr4z; Last edited: March 17, 2021, 2:12 p.m.; Last accessed: Jan 03 2022 7:06 p.m.

killer-cell immunoglobulin-like receptors
metasource: Fairsharing.org
version: FAIRsharing.org: AFND; Allele Frequency Net Database; DOI: https://doi.org/10.25504/FAIRsharing.2cfr4z; Last edited: March 17, 2021, 2:12 p.m.; Last accessed: Jan 03 2022 7:06 p.m.

major histocompatibility complex
metasource: Fairsharing.org
version: FAIRsharing.org: AFND; Allele Frequency Net Database; DOI: https://doi.org/10.25504/FAIRsharing.2cfr4z; Last edited: March 17, 2021, 2:12 p.m.; Last accessed: Jan 03 2022 7:06 p.m.

human genes and diseases
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

general polymorphism databases
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

human leukocyte antigens - hla
metasource: re3data.org
version: re3data.org: Allele Frequency Net Database; editing status 2021-09-02; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3F063 last accessed: 2022-11-04

killer-cell immunoglobulin-like receptors - kir
metasource: re3data.org
version: re3data.org: Allele Frequency Net Database; editing status 2021-09-02; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3F063 last accessed: 2022-11-04

major histocompatibility complex class i chain-related - mic
metasource: re3data.org
version: re3data.org: Allele Frequency Net Database; editing status 2021-09-02; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3F063 last accessed: 2022-11-04

cytokine
metasource: re3data.org
version: re3data.org: Allele Frequency Net Database; editing status 2021-09-02; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3F063 last accessed: 2022-11-04

histocompatibility
metasource: re3data.org
version: re3data.org: Allele Frequency Net Database; editing status 2021-09-02; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3F063 last accessed: 2022-11-04

human genome
metasource: re3data.org
version: re3data.org: Allele Frequency Net Database; editing status 2021-09-02; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3F063 last accessed: 2022-11-04

immune genes
metasource: re3data.org
version: re3data.org: Allele Frequency Net Database; editing status 2021-09-02; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3F063 last accessed: 2022-11-04

immunogenetics
metasource: re3data.org
version: re3data.org: Allele Frequency Net Database; editing status 2021-09-02; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3F063 last accessed: 2022-11-04

population datasets
metasource: re3data.org
version: re3data.org: Allele Frequency Net Database; editing status 2021-09-02; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3F063 last accessed: 2022-11-04

transplantation
metasource: re3data.org
version: re3data.org: Allele Frequency Net Database; editing status 2021-09-02; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3F063 last accessed: 2022-11-04

immunoproteins and antigens
metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:14.949155

genetic variation
metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:14.949155

population genetics
metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:14.949155

public health and epidemiology
metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:14.949155

pharmacogenomics
metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:14.949155

allele allele frequency dna polymorphism genotype human leukocyte antigen complex killer-cell immunoglobulin-like receptors major histocompatibility complex human genes and diseases polymorphism human leukocyte antigens - hla killer-cell immunoglobulin-like receptors - kir major histocompatibility complex class i chain-related - mic cytokine histocompatibility human genome immune genes immunogenetics population datasets transplantation immunoproteins and antigens genetic variation population genetics public health and epidemiology pharmacogenomics

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Allele frequency resource for research and teaching

IPD-KIR - Killer-cell Immunoglobulin-like Receptors

IPD-NHKIR - Non-Human Killer-cell Immunoglobulin-like Receptors

IPD-MHC - Major Histocompatibility Complex Database

IPD - Immuno Polymorphism Database

MaHCO

IPD-IMGT/HLA - Human Leukocyte Antigen Sequence Database

IPD-HPA - Human Platelet Antigens

ImMunoGeneTics Information System

dbMHC

IPD-ESTDAB

al MENA

dbRIP

International HLA and Immunogenetics Workshop XML

PGG.SNV

HGeneCodonOntology

FINDbase

GPCR NaVa database

dbSNP-Q

PGG.Han