ePlant

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ePlant

metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:16.605798

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eplant

metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:16.605798

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Other names: eplant

Visualize the natural connections between DNA sequences, natural variation (polymorphisms), molecular structures, protein-protein interactions, and gene expression patterns by combining several data visualization tools with a zoomable user interface.

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Publications

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ePlant and the 3D data display initiative: integrative systems biology on the world wide web
PMID: 21249219

metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:16.605798

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• ePlant and the 3D data display initiative: integrative systems biology on the world wide web PubMed citations: 17.

  17 articles citing: ePlant and the 3D data display initiative: integrative systems biology on the world wide web

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  A peroxisomal heterodimeric enzyme is involved in benzaldehyde synthesis in plants. PMID:35292635

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  Cross-species transcriptomic analyses reveals common and opposite responses in Arabidopsis, rice and barley following oxidative stress and hormone treatment. PMID:35120438

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  Origin and evolution of a gibberellin-deactivating enzyme GAMT. PMID:33376939

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  A malectin domain kinesin functions in pollen and seed development in Arabidopsis. PMID:31950166

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  Evolutionary Analysis of Unicellular Species in Chlamydomonadales Through Chloroplast Genome Comparison With the Colonial Volvocine Algae. PMID:31275275

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  First step toward gene expression data integration: transcriptomic data acquisition with COMMAND>_. PMID:30691411

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  AgriSeqDB: an online RNA-Seq database for functional studies of agriculturally relevant plant species. PMID:30231853

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  Functional insights from proteome-wide structural modeling of Treponema pallidum subspecies pallidum, the causative agent of syphilis. PMID:29769048

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  The Antarctic sea ice alga Chlamydomonas sp. ICE-L provides insights into adaptive patterns of chloroplast evolution. PMID:29614974

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  ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology. PMID:28808136

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  The receptor-like pseudokinase MRH1 interacts with the voltage-gated potassium channel AKT2. PMID:28300158

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  Phylogeny-Based Systematization of Arabidopsis Proteins with Histone H1 Globular Domain. PMID:28298478

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  Differential Gene Expression and Protein Phosphorylation as Factors Regulating the State of the Arabidopsis SNX1 Protein Complexes in Response to Environmental Stimuli. PMID:27725825

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  ZmGOLS2, a target of transcription factor ZmDREB2A, offers similar protection against abiotic stress as ZmDREB2A. PMID:26584560

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  The Phyre2 web portal for protein modeling, prediction and analysis. PMID:25950237

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  Embedding and publishing interactive, 3-dimensional, scientific figures in Portable Document Format (PDF) files. PMID:24086243

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  Exploration of plant genomes in the FLAGdb++ environment. PMID:21447150

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molecular interactions, pathways and networks

metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:16.605798

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model organisms

metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:16.605798

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genetic variation

metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:16.605798

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protein interactions

metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:16.605798

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dna polymorphism

metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:16.605798

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molecular interactions, pathways and networks model organisms genetic variation protein interaction dna polymorphism