Other names: hypdb
Deep Proteome Profiling Enabled Functional Annotation and Data-Independent Quantification of Proline Hydroxylation Targets.
proteomics experiment proteomics protein interaction sequence analysis protein modifications
dbPTM is a databases which accumulates the biological information related to protein post-translational modification (PTM), such as the catalytic sites, structural information, solvent accessibility o ...
Proteomics database for streptomyces and caulobacter and neisseria. Unique database in the field, containing knowledge based data of time series of protein expression for various stages of development ...
A Database of Host-Pathogen Protein-Protein Interactions and Annotation Features of the Bacteria Causing Huanglongbing HLB Disease.
an annotated database of protein associations. Tabloid Proteome is a database of protein association network generated using publically available mass spectrometry based experiments in PRIDE.These as ...
A Comprehensive Resource for Targeted Proteomics Assays in the Community.
Network of database and computational resources including KEGG (pathways, interactions, etc.) and DBGET/LinkDB (an integrated database retrieval system). It also hosts several web-based tools for sequ ...
An updated database for PTM dynamics in human, mouse, rat and yeast.
Unimod is a community-supported, comprehensive database of protein modifications for mass spectrometry applications. The aim is to provide accurate and verifiable values, derived from elemental compos ...
The RESID Database of Protein Modifications is a comprehensive collection of annotations and structures for protein modifications including amino-terminal, carboxyl-terminal and peptide chain cross-li ...
Explore Protein-Protein Interactions for Cancer Target Discovery Using the OncoPPi Portal. Translating Genomics Data into Protein-Protein Interaction Networks for Therapeutic Manipulation. This site ...
A comprehensive resource for proteome-wide known and predicted ubiquitin ligase/deubiquitinase-substrate interactions in eukaryotic species.
Protein-protein interactions for mammalian TRP channels
A3D Database is a database for structure-based protein aggregation predictions for the human proteome
This module identifies the minimum information required to report the use of quantification techniques in a proteomics experiment, sufficient to support both the effective interpretation and assessmen ...
Database of molecular-level putative protein-drug interactions in the structural human proteome.
STRING is a database of known and predicted protein interactions. The interactions include direct (physical) and indirect (functional) associations.
DNMSO is an ontology for representing de novo sequencing results from Tandem-MS data. For the identification and sequencing of proteins, mass spectrometry (MS) has become the tool of choice and as suc ...
Repository and statistical tools for directly determined PTM crosstalk based on long peptides measured by mass spectrometry. Focus on histone proteins.
Functional annotation and prediction of LINE-1 elements
Arabidopsis thaliana Protein Interactome Database