The Landscape of Virus-Host Protein-Protein Interaction Databases.
PMID:35910656
PHILM2Web: A high-throughput database of macromolecular host-pathogen interactions on the Web.
PMID:35776535
A Hybrid Protocol for Identifying Comorbidity-Based Potential Drugs for COVID-19 Using Biomedical Literature Mining, Network Analysis, and Deep Learning.
PMID:35713866
Identification of hub pathways and drug candidates in gastric cancer through systems biology.
PMID:35650297
Bioinformatics-Based Approaches to Study Virus-Host Interactions During SARS-CoV-2 Infection.
PMID:35554909
The Intricacy of the Viral-Human Protein Interaction Networks: Resources, Data, and Analyses.
PMID:35531299
Abnormal global alternative RNA splicing in COVID-19 patients.
PMID:35421082
Comprehensive characterization of human-virus protein-protein interactions reveals disease comorbidities and potential antiviral drugs.
PMID:35356543
Systematic optimization of host-directed therapeutic targets and preclinical validation of repositioned antiviral drugs.
PMID:35238349
The Landscape of Aminoacyl-tRNA Synthetases Involved in Severe Acute Respiratory Syndrome Coronavirus 2 Infection.
PMID:35153822
Protein-protein interactions: Methods, databases, and applications in virus-host study.
PMID:34909403
Interactome of human and SARS-CoV-2 proteins to identify human hub proteins associated with comorbidities.
PMID:34655901
Target Discovery for Host-Directed Antiviral Therapies: Application of Proteomics Approaches.
PMID:34519533
The chemical biology of coronavirus host-cell interactions.
PMID:34458775
Next-Generation Bioinformatics Approaches and Resources for Coronavirus Vaccine Discovery and Development-A Perspective Review.
PMID:34451937
Heterogeneous graph attention networks for drug virus association prediction.
PMID:34419588
Transfer learning via multi-scale convolutional neural layers for human-virus protein-protein interaction prediction.
PMID:34273146
Identification of viral-mediated pathogenic mechanisms in neurodegenerative diseases using network-based approaches.
PMID:34237135
Manipulation of Cellular Processes via Nucleolus Hijaking in the Course of Viral Infection in Mammals.
PMID:34202380
LSTM-PHV: prediction of human-virus protein-protein interactions by LSTM with word2vec.
PMID:34160596
Multi-omics data integration and network-based analysis drives a multiplex drug repurposing approach to a shortlist of candidate drugs against COVID-19.
PMID:34009288
Prediction of host-pathogen protein interactions by extended network model.
PMID:33907496
Interactions of HIV-1 Capsid with Host Factors and Their Implications for Developing Novel Therapeutics.
PMID:33807824
Data science in unveiling COVID-19 pathogenesis and diagnosis: evolutionary origin to drug repurposing.
PMID:33592108
SARSCOVIDB-A New Platform for the Analysis of the Molecular Impact of SARS-CoV-2 Viral Infection.
PMID:33553941
Modification of Nuclear Compartments and the 3D Genome in the Course of a Viral Infection.
PMID:33456976
Mass spectrometry-based protein-protein interaction networks for the study of human diseases.
PMID:33434350
NCBI's Virus Discovery Codeathon: Building "FIVE" -The Federated Index of Viral Experiments API Index.
PMID:33322070
Alignment of virus-host protein-protein interaction networks by integer linear programming: SARS-CoV-2.
PMID:33284827
The IMEx coronavirus interactome: an evolving map of Coronaviridae-host molecular interactions.
PMID:33206959
Computational strategies to combat COVID-19: useful tools to accelerate SARS-CoV-2 and coronavirus research.
PMID:33147627
Web tools to fight pandemics: the COVID-19 experience.
PMID:33057582
PPARγ Cistrome Repression during Activation of Lung Monocyte-Macrophages in Severe COVID-19.
PMID:33015591
Exploring the SARS-CoV-2 virus-host-drug interactome for drug repurposing.
PMID:32665542
Human Virus Transcriptional Regulators.
PMID:32649876
Network-Based Analysis of OMICs Data to Understand the HIV-Host Interaction.
PMID:32625189
mRNA display with library of even-distribution reveals cellular interactors of influenza virus NS1.
PMID:32415096
Past and ongoing adaptation of human cytomegalovirus to its host.
PMID:32384127
Systems biology approach: Panacea for unravelling host-virus interactions and dynamics of vaccine induced immune response.
PMID:32289096
Understanding of Zaire ebolavirus-human protein interaction for drug repurposing.
PMID:32206696
Temporal dynamics of protein complex formation and dissociation during human cytomegalovirus infection.
PMID:32041945
In silico unravelling pathogen-host signaling cross-talks via pathogen mimicry and human protein-protein interaction networks.
PMID:31956393
Conserved Central Intraviral Protein Interactome of the Herpesviridae Family.
PMID:31575665
ZIKAVID-Zika virus infection database: a new platform to analyze the molecular impact of Zika virus infection.
PMID:31512145
Autophagy induction by the pathogen receptor NECTIN4 and sustained autophagy contribute to peste des petits ruminants virus infectivity.
PMID:31318632
Protein interactions and consensus clustering analysis uncover insights into herpesvirus virion structure and function relationships.
PMID:31199794
PIM kinases facilitate lentiviral evasion from SAMHD1 restriction via Vpx phosphorylation.
PMID:31015445
Network controllability analysis of intracellular signalling reveals viruses are actively controlling molecular systems.
PMID:30765882
Global Interactomics Connect Nuclear Mitotic Apparatus Protein NUMA1 to Influenza Virus Maturation.
PMID:30572664
Interface-Based Structural Prediction of Novel Host-Pathogen Interactions.
PMID:30298406
Evidence that RNA Viruses Drove Adaptive Introgression between Neanderthals and Modern Humans.
PMID:30290142
Protein-protein interactions of human viruses.
PMID:30031213
Viral Induced Oxidative and Inflammatory Response in Alzheimer's Disease Pathogenesis with Identification of Potential Drug Candidates: A Systematic Review using Systems Biology Approach.
PMID:29676229
Autophagy in Negative-Strand RNA Virus Infection.
PMID:29487586
New Targets for Zika Virus Determined by Human-Viral Interactomic: A Bioinformatics Approach.
PMID:29379794
A database of human genes and a gene network involved in response to tick-borne encephalitis virus infection.
PMID:29297316
Characterization of host proteins interacting with the lymphocytic choriomeningitis virus L protein.
PMID:29261807
Autophagy in Measles Virus Infection.
PMID:29186766
DenvInt: A database of protein-protein interactions between dengue virus and its hosts.
PMID:29049286
Structural host-microbiota interaction networks.
PMID:29023448
Protein-Protein Interactions in Virus-Host Systems.
PMID:28861068
Molecular mechanisms of human papillomavirus-related carcinogenesis in head and neck cancer.
PMID:28619685
PCPPI: a comprehensive database for the prediction of Penicillium-crop protein-protein interactions.
PMID:28365721
Integrated systems biology analysis of KSHV latent infection reveals viral induction and reliance on peroxisome mediated lipid metabolism.
PMID:28257516
Prediction of GCRV virus-host protein interactome based on structural motif-domain interactions.
PMID:28253857
DenHunt - A Comprehensive Database of the Intricate Network of Dengue-Human Interactions.
PMID:27618709
A review on host-pathogen interactions: classification and prediction.
PMID:27470504
HVint: A Strategy for Identifying Novel Protein-Protein Interactions in Herpes Simplex Virus Type 1.
PMID:27384951
HPIDB 2.0: a curated database for host-pathogen interactions.
PMID:27374121
Networks of Host Factors that Interact with NS1 Protein of Influenza A Virus.
PMID:27199973
Viruses are a dominant driver of protein adaptation in mammals.
PMID:27187613
Editorial: Computational Systems Biology of Pathogen-Host Interactions.
PMID:26870002
Cell type-specific properties and environment shape tissue specificity of cancer genes.
PMID:26856619
Proteomic approaches to uncovering virus-host protein interactions during the progression of viral infection.
PMID:26817613
Novel insights into human respiratory syncytial virus-host factor interactions through integrated proteomics and transcriptomics analysis.
PMID:26760927
Application of Functional Genomics for Bovine Respiratory Disease Diagnostics.
PMID:26526746
Revealing potential molecular targets bridging colitis and colorectal cancer based on multidimensional integration strategy.
PMID:26461477
Decoding protein networks during virus entry by quantitative proteomics.
PMID:26365680
Computational analysis of protein interaction networks for infectious diseases.
PMID:26261187
Tools for visualization and analysis of molecular networks, pathways, and -omics data.
PMID:26082651
A review on computational systems biology of pathogen-host interactions.
PMID:25914674