Other names: rnasolo
A repository of cleaned PDB-derived RNA 3D structures.
rna nucleic acid structure analysis structure prediction electron microscopy
A database of RNA multiloops.
Molecular Modeling of RNA Structure-From Base Pair Analysis in Crystals to Structure Prediction.
A database that collects tetrads, quadruplexes, and G4-helices found in PDB-deposited structures of nucleic acids. It stores their sequences, secondary and tertiary structures, and motif-specific desc ...
A database of 3D RNA fragments within known RNA structures
RNA Characterization of Secondary Structure Motifs (RNA CoSSMos) database allows the systematic searching of all catalogued three-dimensional nucleic acid PDB structures that contain secondary structu ...
Repository of workflows for image processing in cryo-electron microscopy using Scipion.
The RNA Modification Database contains information pertaining to naturally occurring RNA modifications. The database employs an easy-to-use, searchable interface for obtaining detailed data on the 109 ...
The Nucleic Acids Database contains information about experimentally-determined nucleic acids and complex assemblies. NDB can be used to perform searches based on annotations relating to sequence, str ...
Database designed to provide a comprehensive perspective and understanding of RNA motif structure, function, tertiary interactions and their relationships.
Cryo-electron microscopy reconstruction methods are uniquely able to reveal structures of many important macromolecules and macromolecular complexes. The Electron Microscopy Data Bank (EMDB) is a publ ...
EMPIAR, the Electron Microscopy Public Image Archive, is a public resource for raw electron microscopy images. Here, you can browse, upload and download the raw images used to build a 3D structure. Th ...
RNA structural modules and their interactions
Predicted structures of internal transcribed spacer 2 (ITS2)
RNA aptamer 3D-structural modeling database.
The Database of Macromolecular Movements (MolMovDB) contains a collection of animated protein and RNA structures to assist in the exploration of macromolecular flexibility. Software for structure anal ...
Nearest Neighbor parameters for predicting RNA folding
The CryoEM Ontology for describing objects and workflows in Single Particle Analysis by Cryo Electron Microscopy.
rPredictorDB is a predictive database of secondary structures of individual RNAs and their formatted plots.
Database for binding affinities of protein-nucleic acid complexes and their mutants.
NAPP (Nucleic Acids Phylogenetic Profile) enables users to retrieve RNA-rich clusters from any genome in a list of 1000+ sequenced bacterial genomes. RNA-rich clusters can be viewed separately or, alt ...