Synaptotagmin-13 orchestrates pancreatic endocrine cell egression and islet morphogenesis.
PMID:35927244
The E3 ubiquitin ligase HECTD1 contributes to cell proliferation through an effect on mitosis.
PMID:35915203
Neprilysins regulate muscle contraction and heart function via cleavage of SERCA-inhibitory micropeptides.
PMID:35906206
Lipid-related FABP5 activation of tumor-associated monocytes fosters immune privilege via PD-L1 expression on Treg cells in hepatocellular carcinoma.
PMID:35902729
Quantitative Detection of Protein Splice Variants by Selected Reaction Monitoring (SRM) Mass Spectrometry.
PMID:35895268
A Protocol for the Acquisition of Comprehensive Proteomics Data from Single Cases Using Formalin-Fixed Paraffin Embedded Sections.
PMID:35893583
The G3BP1-UPF1-Associated Long Non-Coding RNA CALA Regulates RNA Turnover in the Cytoplasm.
PMID:35893232
Proteotranscriptomics - A facilitator in omics research.
PMID:35891789
A Current Encyclopedia of Bioinformatics Tools, Data Formats and Resources for Mass Spectrometry Lipidomics.
PMID:35888710
Proteomic Investigation of the Role of Nucleostemin in Nucleophosmin-Mutated OCI-AML 3 Cell Line.
PMID:35886999
TTC30A and TTC30B Redundancy Protects IFT Complex B Integrity and Its Pivotal Role in Ciliogenesis.
PMID:35885974
Transcriptomic and proteomic retinal pigment epithelium signatures of age-related macular degeneration.
PMID:35882847
Multiple Myeloma-Derived Extracellular Vesicles Modulate the Bone Marrow Immune Microenvironment.
PMID:35874665
Strongly Truncated Dnaaf4 Plays a Conserved Role in Drosophila Ciliary Dynein Assembly as Part of an R2TP-Like Co-Chaperone Complex With Dnaaf6.
PMID:35873488
Identifying and characterising Thrap3, Bclaf1 and Erh interactions using cross-linking mass spectrometry.
PMID:35865489
A modification-centric assessment tool for the performance of chemoproteomic probes.
PMID:35864333
Structure of the metastatic factor P-Rex1 reveals a two-layered autoinhibitory mechanism.
PMID:35864164
Oocytes maintain ROS-free mitochondrial metabolism by suppressing complex I.
PMID:35859172
Activation of CD44/PAK1/AKT signaling promotes resistance to FGFR1 inhibition in squamous-cell lung cancer.
PMID:35853934
Combinatorial targeting of a chromatin complex comprising Dot1L, menin and the tyrosine kinase BAZ1B reveals a new therapeutic vulnerability of endocrine therapy-resistant breast cancer.
PMID:35850772
Solvent Precipitation SP3 (SP4) Enhances Recovery for Proteomics Sample Preparation without Magnetic Beads.
PMID:35848328
CK2β Is a Gatekeeper of Focal Adhesions Regulating Cell Spreading.
PMID:35847979
Predicting the Success of Fmoc-Based Peptide Synthesis.
PMID:35847273
Dataset containing physiological amounts of spike-in proteins into murine C2C12 background as a ground truth quantitative LC-MS/MS reference.
PMID:35845101
Proteomic analysis of low- and high-grade human colon adenocarcinoma tissues and tissue-derived primary cell lines reveals unique biological functions of tumours and new protein biomarker candidates.
PMID:35842572
The CIP2A-TOPBP1 complex safeguards chromosomal stability during mitosis.
PMID:35842428
The surfaceome of multiple myeloma cells suggests potential immunotherapeutic strategies and protein markers of drug resistance.
PMID:35840578
NExtSEEK: Extending SEEK for Active Management of Interoperable Metadata.
PMID:35836998
Multi-omics study identifies novel signatures of DNA/RNA, amino acid, peptide, and lipid metabolism by simulated diabetes on coronary endothelial cells.
PMID:35835939
A time-resolved multi-omics atlas of Acanthamoeba castellanii encystment.
PMID:35835784
Accelerated lysine metabolism conveys kidney protection in salt-sensitive hypertension.
PMID:35835746
Identification of Proteases and Protease Inhibitors in Seeds of the Recalcitrant Forest Tree Species Quercus ilex.
PMID:35832232
Scalable multiplex co-fractionation/mass spectrometry platform for accelerated protein interactome discovery.
PMID:35831314
A specialized Hsp90 co-chaperone network regulates steroid hormone receptor response to ligand.
PMID:35830801
Proteomic characterisation of triple negative breast cancer cells following CDK4/6 inhibition.
PMID:35817775
Using Targeted Liquid Chromatography-Tandem Mass Spectrometry to Rapidly Detect β-Lactam, Aminoglycoside, and Fluoroquinolone Resistance Mechanisms in Blood Cultures Growing E. coli or K. pneumoniae.
PMID:35814653
Proteomic Signatures of Monocytes in Hereditary Recurrent Fevers.
PMID:35812440
Analysis and Evaluation of the Flagellin Activity of Bacillus amyloliquefaciens Ba168 Antimicrobial Proteins against Penicillium expansum.
PMID:35807503
Cytoplasmic LMO2-LDB1 Complex Activates STAT3 Signaling through Interaction with gp130-JAK in Glioma Stem Cells.
PMID:35805116
Mutant KRAS-Associated Proteome Is Mainly Controlled by Exogenous Factors.
PMID:35805073
The Potential Tumor-Suppressor DHRS7 Inversely Correlates with EGFR Expression in Prostate Cancer Cells and Tumor Samples.
PMID:35804847
Mimicked synthetic ribosomal protein complex for benchmarking crosslinking mass spectrometry workflows.
PMID:35803948
dia-PASEF data analysis using FragPipe and DIA-NN for deep proteomics of low sample amounts.
PMID:35803928
Protein palmitoylation-mediated palmitic acid sensing causes blood-testis barrier damage via inducing ER stress.
PMID:35803125
Patient-Derived Extracellular Vesicles Proteins as New Biomarkers in Multiple Myeloma - A Real-World Study.
PMID:35800053
Distinct cell type-specific protein signatures in GRN and MAPT genetic subtypes of frontotemporal dementia.
PMID:35799292
Simplifying MS1 and MS2 spectra to achieve lower mass error, more dynamic range, and higher peptide identification confidence on the Bruker timsTOF Pro.
PMID:35797390
People with HIV have higher percentages of circulating CCR5+ CD8+ T cells and lower percentages of CCR5+ regulatory T cells.
PMID:35794176
Genomic erosion and horizontal gene transfer shape functional differences of the ExlA toxin in Pseudomonas spp.
PMID:35789842
Increased CSF-decorin predicts brain pathological changes driven by Alzheimer's Aβ amyloidosis.
PMID:35787306
Differential Trafficking and Expression of PIR Proteins in Acute and Chronic Plasmodium Infections.
PMID:35782145
Aedes aegypti Aag-2 Cell Proteome Modulation in Response to Chikungunya Virus Infection.
PMID:35782121
The splicing factor RBM17 drives leukemic stem cell maintenance by evading nonsense-mediated decay of pro-leukemic factors.
PMID:35781533
Proteomic Analysis of Chicken Chorioallantoic Membrane (CAM) during Embryonic Development Provides Functional Insight.
PMID:35774275
A degradative to secretory autophagy switch mediates mitochondria clearance in the absence of the mATG8-conjugation machinery.
PMID:35764633
Hsp multichaperone complex buffers pathologically modified Tau.
PMID:35760815
Multi-omics reveals mechanisms of resistance to potato root infection by Spongospora subterranea.
PMID:35752627
Cell surface glycan engineering reveals that matriglycan alone can recapitulate dystroglycan binding and function.
PMID:35750689
Deciphering signal transduction networks in the liver by mechanistic mathematical modelling.
PMID:35748700
Adaptation of Oxidative Phosphorylation Machinery Compensates for Hepatic Lipotoxicity in Early Stages of MAFLD.
PMID:35743314
Quantitative Succinyl-Proteome Profiling of Turnip (Brassica rapa var. rapa) in Response to Cadmium Stress.
PMID:35741076
CFTR Rescue by Lumacaftor (VX-809) Induces an Extensive Reorganization of Mitochondria in the Cystic Fibrosis Bronchial Epithelium.
PMID:35741067
Proteomic Profiling Identifies Co-Regulated Expression of Splicing Factors as a Characteristic Feature of Intravenous Leiomyomatosis.
PMID:35740573
Polyphenols and IUGR Pregnancies: Effects of the Antioxidant Hydroxytyrosol on the Hippocampus Proteome in a Porcine Model.
PMID:35740029
Functional changes of the gastric bypass microbiota reactivate thermogenic adipose tissue and systemic glucose control via intestinal FXR-TGR5 crosstalk in diet-induced obesity.
PMID:35739571
Palaeoproteomics guidelines to identify proteinaceous binders in artworks following the study of a 15th-century painting by Sandro Botticelli's workshop.
PMID:35739140
A novel, essential trans-splicing protein connects the nematode SL1 snRNP to the CBC-ARS2 complex.
PMID:35736244
AtNusG, a chloroplast nucleoid protein of bacterial origin linking chloroplast transcriptional and translational machineries, is required for proper chloroplast gene expression in Arabidopsis thaliana.
PMID:35736138
Potential biomarkers of spinal dural arteriovenous fistula: C4BPA and C1QA.
PMID:35733178
SILAC kinase screen identifies potential MASTL substrates.
PMID:35732702
RNase III CLASH in MRSA uncovers sRNA regulatory networks coupling metabolism to toxin expression.
PMID:35732654
Solution structure of the type I polyketide synthase Pks13 from Mycobacterium tuberculosis.
PMID:35729566
Transcriptomic and proteomic profiling of peptidase expression in Fasciola hepatica eggs developing at host's body temperature.
PMID:35725898
Revealing the human mucinome.
PMID:35725833
Doxycycline Alters the Porcine Renal Proteome and Degradome during Hypothermic Machine Perfusion.
PMID:35723325
Time-resolved phosphoproteome and proteome analysis reveals kinase signaling on master transcription factors during myogenesis.
PMID:35721465
Identification of the Bartonella autotransporter CFA as a protective antigen and hypervariable target of neutralizing antibodies in mice.
PMID:35714289
Integrated view and comparative analysis of baseline protein expression in mouse and rat tissues.
PMID:35714157
Recognition of Cell Wall Mannosylated Components as a Conserved Feature for Fungal Entrance, Adaptation and Survival Within Trophozoites of Acanthamoeba castellanii and Murine Macrophages.
PMID:35711659
p166 links membrane and intramitochondrial modules of the trypanosomal tripartite attachment complex.
PMID:35709300
Dynamics of allosteric regulation of the phospholipase C-γ isozymes upon recruitment to membranes.
PMID:35708309
Time-resolved proximity labeling of protein networks associated with ligand-activated EGFR.
PMID:35705039
Network approaches for modeling the effect of drugs and diseases.
PMID:35704883
Factor quinolinone inhibitors disrupt spindles and multiple LSF (TFCP2)-protein interactions in mitosis, including with microtubule-associated proteins.
PMID:35704642
Integrated multi-omics reveal polycomb repressive complex 2 restricts human trophoblast induction.
PMID:35697783
Maximizing Depth of PTM Coverage: Generating Robust MS Datasets for Computational Prediction Modeling.
PMID:35696073
ITRAQ-based quantitative proteomic analysis reveals that VPS35 promotes the expression of MCM2-7 genes in HeLa cells.
PMID:35690672
Tissue catabolism and donor-specific dexamethasone response in a human osteochondral model of post-traumatic osteoarthritis.
PMID:35689293
Excessive local host-graft connectivity in aging and amyloid-loaded brain.
PMID:35687689
Brain injury environment critically influences the connectivity of transplanted neurons.
PMID:35687687
An atlas of Arabidopsis protein S-acylation reveals its widespread role in plant cell organization and function.
PMID:35681017
Extracellular release of two peptidases dominates generation of the trypanosome quorum-sensing signal.
PMID:35680928
Proteomic Analysis Reveals Proteins Involved in the Mode of Action of β-Citronellol Identified From Citrus hystrix DC. Leaf Against Candida albicans.
PMID:35677908
Dataset for suppressors of amyloid-β toxicity and their functions in recombinant protein production in yeast.
PMID:35677454
The renal lineage factor PAX8 controls oncogenic signalling in kidney cancer.
PMID:35676472
Comparative interactome analysis of the PRE DNA-binding factors: purification of the Combgap-, Zeste-, Psq-, and Adf1-associated proteins.
PMID:35676368
Quantitative proteomics and in-cell cross-linking reveal cellular reorganisation during early neuronal differentiation of SH-SY5Y cells.
PMID:35672350
Signatures of glial activity can be detected in the CSF proteome.
PMID:35666874
Innovative in Silico Approaches for Characterization of Genes and Proteins.
PMID:35664302
BacPROTACs mediate targeted protein degradation in bacteria.
PMID:35662409
A synaptomic analysis reveals dopamine hub synapses in the mouse striatum.
PMID:35660742
Discovery of Unknown Posttranslational Modifications by Top-Down Mass Spectrometry.
PMID:35657594
Brain proteome profiling implicates the complement and coagulation cascade in multiple system atrophy brain pathology.
PMID:35657417
5'isomiR-183-5p|+2 elicits tumor suppressor activity in a negative feedback loop with E2F1.
PMID:35655310
Mistargeting of aggregation prone mitochondrial proteins activates a nucleus-mediated posttranscriptional quality control pathway in trypanosomes.
PMID:35654893
Augmented Enterocyte Damage During Candida albicans and Proteus mirabilis Coinfection.
PMID:35651758
A method for lipoprotein (a) Isolation from a small volume of plasma with applications for clinical research.
PMID:35650291
Characterisation of a nucleo-adhesome.
PMID:35650196
Impact of p53 knockdown on protein dataset of HaCaT cells.
PMID:35647242
Method for Independent Estimation of the False Localization Rate for Phosphoproteomics.
PMID:35640880
Exon junction complex-associated multi-adapter RNPS1 nucleates splicing regulatory complexes to maintain transcriptome surveillance.
PMID:35640609
InvL, an Invasin-Like Adhesin, Is a Type II Secretion System Substrate Required for Acinetobacter baumannii Uropathogenesis.
PMID:35638734
A learned embedding for efficient joint analysis of millions of mass spectra.
PMID:35637305
Differential Expression of Proteins in an Atypical Presentation of Autoimmune Lymphoproliferative Syndrome.
PMID:35628184
Multiphoton Microscopy Reveals DAPK1-Dependent Extracellular Matrix Remodeling in a Chorioallantoic Membrane (CAM) Model.
PMID:35625969
Proteomic and transcriptomic profiles of human urothelial cancer cells with histone deacetylase 5 overexpression.
PMID:35624179
Cytosolic aspartate aminotransferase moonlights as a ribosome-binding modulator of Gcn2 activity during oxidative stress.
PMID:35621265
Protective Signature of IFNγ-Stimulated Microglia Relies on miR-124-3p Regulation From the Secretome Released by Mutant APP Swedish Neuronal Cells.
PMID:35620289
Perception of a conserved family of plant signalling peptides by the receptor kinase HSL3.
PMID:35617122
Proteomic profiling of concurrently isolated primary microvascular endothelial cells, pericytes, and vascular smooth muscle cells from adult mouse heart.
PMID:35614104
Engineered SH2 Domains for Targeted Phosphoproteomics.
PMID:35613471
The RNA-bound proteome of MRSA reveals post-transcriptional roles for helix-turn-helix DNA-binding and Rossmann-fold proteins.
PMID:35610211
Opening opportunities for Kd determination and screening of MHC peptide complexes.
PMID:35606511
A Spin-Tip Enrichment Strategy for Simultaneous Analysis of N-Glycopeptides and Phosphopeptides from Human Pancreatic Tissues.
PMID:35604151
T Cell Epitope Discovery in the Context of Distinct and Unique Indigenous HLA Profiles.
PMID:35603215
Double-Stranded RNA Viruses Are Released From Trichomonas vaginalis Inside Small Extracellular Vesicles and Modulate the Exosomal Cargo.
PMID:35602021
Multiaspect Examinations of Possible Alternative Mappings of Identified Variant Peptides: A Case Study on the HEK293 Cell Line.
PMID:35601313
Candida albicans SR-Like Protein Kinases Regulate Different Cellular Processes: Sky1 Is Involved in Control of Ion Homeostasis, While Sky2 Is Important for Dipeptide Utilization.
PMID:35601106
QKI-6 Suppresses Cell Proliferation, Migration, and EMT in Non-Small Cell Lung Cancer.
PMID:35600368
Dynamic character displacement among a pair of bacterial phyllosphere commensals in situ.
PMID:35595740
Improved Interpretation of Protein Conformational Differences and Ligand Occupancy in Large-Scale Cross-Link Data.
PMID:35594376
Trafficking regulator of GLUT4-1 (TRARG1) is a GSK3 substrate.
PMID:35594055
Identification of allergenomic signatures in allergic and well-tolerated apple genotypes using LC-MS/MS.
PMID:35592704
13C15N: glucagon-based novel isotope dilution mass spectrometry method for measurement of glucagon metabolism in humans.
PMID:35590248
Localization of EccA3 at the growing pole in Mycobacterium smegmatis.
PMID:35590245
Deep Visual Proteomics defines single-cell identity and heterogeneity.
PMID:35590073
A novel membrane complex is required for docking and regulated exocytosis of lysosome-related organelles in Tetrahymena thermophila.
PMID:35587496
SARS-CoV-2 host-shutoff impacts innate NK cell functions, but antibody-dependent NK activity is strongly activated through non-spike antibodies.
PMID:35587364
Genetic background and mistranslation frequency determine the impact of mistranslating tRNASerUGG.
PMID:35587152
Distinct gene clusters drive formation of ferrosome organelles in bacteria.
PMID:35585231
Deubiquitinating enzymes and the proteasome regulate preferential sets of ubiquitin substrates.
PMID:35585066
HDLBP binds ER-targeted mRNAs by multivalent interactions to promote protein synthesis of transmembrane and secreted proteins.
PMID:35585045
Nucleotide-amino acid π-stacking interactions initiate photo cross-linking in RNA-protein complexes.
PMID:35581222
The potential of remdesivir to affect function, metabolism and proliferation of cardiac and kidney cells in vitro.
PMID:35579693
Tracing the mobility of a Late Epigravettian (~ 13 ka) male infant from Grotte di Pradis (Northeastern Italian Prealps) at high-temporal resolution.
PMID:35577834
Skin Cancer-Associated S. aureus Strains Can Induce DNA Damage in Human Keratinocytes by Downregulating DNA Repair and Promoting Oxidative Stress.
PMID:35565272
Glycolysis Dependency as a Hallmark of SF3B1-Mutated Cells.
PMID:35565242
Phosphoproteomics Unravel HBV Triggered Rewiring of Host Phosphosignaling Events.
PMID:35563518
Novel Antibody-Peptide Binding Assay Indicates Presence of Immunoglobulins against EGFR Phospho-Site S1166 in High-Grade Glioma.
PMID:35563452
Characterization of the Skeletal Muscle Proteome in Undernourished Old Rats.
PMID:35563153
Systems-wide analysis revealed shared and unique responses to moderate and acute high temperatures in the green alga Chlamydomonas reinhardtii.
PMID:35562408
Elevation of fatty acid desaturase 2 in esophageal adenocarcinoma increases polyunsaturated lipids and may exacerbate bile acid-induced DNA damage.
PMID:35560527
Peroxisome-Derived Hydrogen Peroxide Modulates the Sulfenylation Profiles of Key Redox Signaling Proteins in Flp-In T-REx 293 Cells.
PMID:35557958
Mediator Complex of the Malaria Parasite Plasmodium falciparum Associates with Evolutionarily Novel Subunits.
PMID:35557691
AIMP2-DX2 provides therapeutic interface to control KRAS-driven tumorigenesis.
PMID:35546148
OXSR1 inhibits inflammasome activation by limiting potassium efflux during mycobacterial infection.
PMID:35545295
Paracrine signalling between intestinal epithelial and tumour cells induces a regenerative programme.
PMID:35543624
Conservation and divergence of myelin proteome and oligodendrocyte transcriptome profiles between humans and mice.
PMID:35543322
Environmental cues from neural crest derivatives act as metastatic triggers in an embryonic neuroblastoma model.
PMID:35538114
Factor inhibiting HIF can catalyze two asparaginyl hydroxylations in VNVN motifs of ankyrin fold proteins.
PMID:35537551
Design of a Potent, Selective, and Brain-Penetrant Inhibitor of Wnt-Deactivating Enzyme Notum by Optimization of a Crystallographic Fragment Hit.
PMID:35536179
SDR enzymes oxidize specific lipidic alkynylcarbinols into cytotoxic protein-reactive species.
PMID:35535493
Comparative proteome analysis of the tegument of male and female adult Schistosoma mansoni.
PMID:35534617
Von Willebrand factor A1 domain stability and affinity for GPIbα are differentially regulated by its O-glycosylated N- and C-linker.
PMID:35532124
The splicing-regulatory lncRNA NTRAS sustains vascular integrity.
PMID:35527520
Urinary extracellular vesicles contain mature transcriptome enriched in circular and long noncoding RNAs with functional significance in prostate cancer.
PMID:35527349
Interval-Based Secretomics Unravels Acute-Phase Response in Hepatocyte Model Systems.
PMID:35525403
Tetraspanins distinguish separate extracellular vesicle subpopulations in human serum and plasma - Contributions of platelet extracellular vesicles in plasma samples.
PMID:35524458
Quantitative proteomic analysis of cerebrospinal fluid reveals CD163, A2M and full-length APP as potential diagnostic biomarkers of paediatric bacterial meningitis.
PMID:35524265
Exploring synergies between plant metabolic modelling and machine learning.
PMID:35521559
RNase E and HupB dynamics foster mycobacterial cell homeostasis and fitness.
PMID:35521527
The Okur-Chung Neurodevelopmental Syndrome Mutation CK2K198R Leads to a Rewiring of Kinase Specificity.
PMID:35517865
SPIN enables high throughput species identification of archaeological bone by proteomics.
PMID:35513387
eEF2K Activity Determines Synergy to Cotreatment of Cancer Cells With PI3K and MEK Inhibitors.
PMID:35513296
MITF deficiency accelerates GNAQ-driven uveal melanoma.
PMID:35512098
Histone Variant macroH2A1.1 Enhances Nonhomologous End Joining-dependent DNA Double-strand-break Repair and Reprogramming Efficiency of Human iPSCs.
PMID:35511867
Isobaric Tags for Relative and Absolute Quantitation Identification of Blood Proteins Relevant to Paroxetine Response in Patients With Major Depressive Disorder.
PMID:35509884
CDC7-independent G1/S transition revealed by targeted protein degradation.
PMID:35508654
Enhancer RNAs stimulate Pol II pause release by harnessing multivalent interactions to NELF.
PMID:35508485
Data Mining, Quality and Management in the Life Sciences.
PMID:35507257
Host succinate inhibits influenza virus infection through succinylation and nuclear retention of the viral nucleoprotein.
PMID:35506364
Pytheas: a software package for the automated analysis of RNA sequences and modifications via tandem mass spectrometry.
PMID:35505047
Off-target effects of the lysosomal acid lipase inhibitors Lalistat-1 and Lalistat-2 on neutral lipid hydrolases.
PMID:35504532
Systematic evaluation and optimization of protein extraction parameters in diagnostic FFPE specimens.
PMID:35501693
Activated SUMOylation restricts MHC class I antigen presentation to confer immune evasion in cancer.
PMID:35499080
Large-Scale Protein and Phosphoprotein Profiling to Explore Potato Resistance Mechanisms to Spongospora subterranea Infection.
PMID:35498715
Data of chemical composition of the particles from OH-initiated oxidation of 1,3,5-trimethylbenzene.
PMID:35496493
Metaproteomic Profile of the Colonic Luminal Microbiota From Patients With Colon Cancer.
PMID:35495697
Physiological substrates and ontogeny-specific expression of the ubiquitin ligases MARCH1 and MARCH8.
PMID:35492398
Reovirus μ2 protein modulates host cell alternative splicing by reducing protein levels of U5 snRNP core components.
PMID:35489070
Age and sex effects across the blood proteome after ionizing radiation exposure can bias biomarker screening and risk assessment.
PMID:35487913
Doublecortin engages the microtubule lattice through a cooperative binding mode involving its C-terminal domain.
PMID:35485925
Deficiency in coatomer complex I causes aberrant activation of STING signalling.
PMID:35484149
Structural dynamics shape the fitness window of alanine:glyoxylate aminotransferase.
PMID:35481644
Transcriptome and Proteome Analysis in LUHMES Cells Overexpressing Alpha-Synuclein.
PMID:35481270
Canagliflozin mitigates ferroptosis and ameliorates heart failure in rats with preserved ejection fraction.
PMID:35476142
Sculpting the Bacterial O-Glycoproteome: Functional Analyses of Orthologous Oligosaccharyltransferases with Diverse Targeting Specificities.
PMID:35471082
HOXB13 suppresses de novo lipogenesis through HDAC3-mediated epigenetic reprogramming in prostate cancer.
PMID:35468964
The Phenylacetic Acid Catabolic Pathway Regulates Antibiotic and Oxidative Stress Responses in Acinetobacter.
PMID:35467424
Cellular responses to halofuginone reveal a vulnerability of the GCN2 branch of the integrated stress response.
PMID:35466425
In-Depth Quantitative Proteomics Characterization of In Vitro Selected Miltefosine Resistance in Leishmania infantum.
PMID:35466238
Plasma Exosomal Proteomic Pattern of Epstein-Barr Virus-Associated Hemophagocytic Lymphohistiocytosis.
PMID:35464963
Capillary Electrophoresis Mass Spectrometry for Scalable Single-Cell Proteomics.
PMID:35464213
Identifying Novel Osteoarthritis-Associated Genes in Human Cartilage Using a Systematic Meta-Analysis and a Multi-Source Integrated Network.
PMID:35457215
Methylglyoxal Impairs Sister Chromatid Separation in Lymphocytes.
PMID:35456956
Red Blood Cell BCL-xL Is Required for Plasmodium falciparum Survival: Insights into Host-Directed Malaria Therapies.
PMID:35456874
Surfactin Shows Relatively Low Antimicrobial Activity against Bacillus subtilis and Other Bacterial Model Organisms in the Absence of Synergistic Metabolites.
PMID:35456828
NMS-873 Leads to Dysfunctional Glycometabolism in A p97-Independent Manner in HCT116 Colon Cancer Cells.
PMID:35456598
Modern Metaproteomics: A Unique Tool to Characterize the Active Microbiome in Health and Diseases, and Pave the Road towards New Biomarkers-Example of Crohn's Disease and Ulcerative Colitis Flare-Ups.
PMID:35456018
Application of Proteogenomics to Urine Analysis towards the Identification of Novel Biomarkers of Prostate Cancer: An Exploratory Study.
PMID:35454907
Combined Alcohol Exposure and KRAS Mutation in Human Pancreatic Ductal Epithelial Cells Induces Proliferation and Alters Subtype Signatures Determined by Multi-Omics Analysis.
PMID:35454872
Defective Proinsulin Handling Modulates the MHC I Bound Peptidome and Activates the Inflammasome in β-Cells.
PMID:35453564
Mycobacterium tuberculosis Affects Protein and Lipid Content of Circulating Exosomes in Infected Patients Depending on Tuberculosis Disease State.
PMID:35453532
Serum Proteomic Profile of Asthmatic Patients after Six Months of Benralizumab and Mepolizumab Treatment.
PMID:35453511
Comparative Proteomic Analysis of Rhizoctonia solani Isolates Identifies the Differentially Expressed Proteins with Roles in Virulence.
PMID:35448601
Identification of distinct N-glycosylation patterns on extracellular vesicles from small-cell and non-small-cell lung cancer cells.
PMID:35447118
Expression of the Cyanobacterial FoF1 ATP Synthase Regulator AtpΘ Depends on Small DNA-Binding Proteins and Differential mRNA Stability.
PMID:35446123
Age-Dependent Increase in Schmidt-Lanterman Incisures and a Cadm4-Associated Membrane Skeletal Complex in Fatty Acid 2-hydroxylase Deficient Mice: a Mouse Model of Spastic Paraplegia SPG35.
PMID:35445918
Kinase Inhibitors as Potential Therapeutic Agents in the Treatment of COVID-19.
PMID:35444538
Coral holobiont cues prime Endozoicomonas for a symbiotic lifestyle.
PMID:35444262
A modified TurboID approach identifies tissue-specific centriolar components in C. elegans.
PMID:35442950
A novel screening strategy to identify histone methyltransferase inhibitors reveals a crosstalk between DOT1L and CARM1.
PMID:35441144
USP25 promotes pathological HIF-1-driven metabolic reprogramming and is a potential therapeutic target in pancreatic cancer.
PMID:35440539
Selective phosphorylation of threonine residues defines GPR84-arrestin interactions of biased ligands.
PMID:35427647
Cathelicidin-3 Associated With Serum Extracellular Vesicles Enables Early Diagnosis of a Transmissible Cancer.
PMID:35422813
Adaptive responses of marine diatoms to zinc scarcity and ecological implications.
PMID:35422102
A conserved module regulates receptor kinase signalling in immunity and development.
PMID:35422079
Hidden information on protein function in censuses of proteome foldedness.
PMID:35422070
Humanized mice reveal a macrophage-enriched gene signature defining human lung tissue protection during SARS-CoV-2 infection.
PMID:35421379
Analysis of human brain tissue derived from DBS surgery.
PMID:35418104
The Arabidopsis F-box protein FBW2 targets AGO1 for degradation to prevent spurious loading of illegitimate small RNA.
PMID:35417704
TMT-Based Multiplexed Quantitation of N-Glycopeptides Reveals Glycoproteome Remodeling Induced by Oncogenic Mutations.
PMID:35415375
Identification and Tetramer Structure of Hemin-Binding Protein SPD_0310 Linked to Iron Homeostasis and Virulence of Streptococcus pneumoniae.
PMID:35414267
A machine learning algorithm with subclonal sensitivity reveals widespread pan-cancer human leukocyte antigen loss of heterozygosity.
PMID:35414054
Simple, efficient and thorough shotgun proteomic analysis with PatternLab V.
PMID:35411045
Protein Profiling of WERI-RB1 and Etoposide-Resistant WERI-ETOR Reveals New Insights into Topoisomerase Inhibitor Resistance in Retinoblastoma.
PMID:35409416
Isoprene Emission Influences the Proteomic Profile of Arabidopsis Plants under Well-Watered and Drought-Stress Conditions.
PMID:35409196
Proteomics Approach Highlights Early Changes in Human Fibroblasts-Pancreatic Ductal Adenocarcinoma Cells Crosstalk.
PMID:35406724
The Emerging Role of E3 Ubiquitin Ligase SMURF2 in the Regulation of Transcriptional Co-Repressor KAP1 in Untransformed and Cancer Cells and Tissues.
PMID:35406379
A G-Protein-Coupled Receptor Modulates Gametogenesis via PKG-Mediated Signaling Cascade in Plasmodium berghei.
PMID:35404079
The E3 ubiquitin ligase SMURF2 stabilizes RNA editase ADAR1p110 and promotes its adenosine-to-inosine (A-to-I) editing function.
PMID:35403872
Role of the prorenin receptor in endometrial cancer cell growth.
PMID:35401936
Soybean Leaf Proteomic Profile Influenced by Rhizobacteria Under Optimal and Salt Stress Conditions.
PMID:35401626
Preclinical Studies on Convalescent Human Immune Plasma-Derived Exosome: Omics and Antiviral Properties to SARS-CoV-2.
PMID:35401544
Proteomic Analysis of the Non-genetic Response to Cisplatin in Lung Cancer Cells.
PMID:35399307
The serum of COVID-19 asymptomatic patients up-regulates proteins related to endothelial dysfunction and viral response in circulating angiogenic cells ex-vivo.
PMID:35397534
Wheat grain proteomic and protein-metabolite interactions analyses provide insights into plant growth promoting bacteria-arbuscular mycorrhizal fungi-wheat interactions.
PMID:35396966
Specific inflammatory osteoclast precursors induced during chronic inflammation give rise to highly active osteoclasts associated with inflammatory bone loss.
PMID:35396510
Glyco-Decipher enables glycan database-independent peptide matching and in-depth characterization of site-specific N-glycosylation.
PMID:35393418
Functional and structural deficiencies of Gemin5 variants associated with neurological disorders.
PMID:35393353
A Proteomic Analysis Indicates That Oxidative Stress Is the Common Feature Triggering Antibiotic Production in Streptomyces coelicolor and in the pptA Mutant of Streptomyces lividans.
PMID:35392450
Acetate Degradation at Low pH by the Moderately Acidophilic Sulfate Reducer Acididesulfobacillus acetoxydans gen. nov. sp. nov.
PMID:35391737
Activation of the essential kinase PDK1 by phosphoinositide-driven trans-autophosphorylation.
PMID:35387990
The Rhinobiome of Exacerbated Wheezers and Asthmatics: Insights From a German Pediatric Exacerbation Network.
PMID:35386977
Integrative molecular roadmap for direct conversion of fibroblasts into myocytes and myogenic progenitor cells.
PMID:35385316
Proteome metabolome and transcriptome data for three Symbiodiniaceae under ambient and heat stress conditions.
PMID:35383179
Integrative analysis of non-small cell lung cancer patient-derived xenografts identifies distinct proteotypes associated with patient outcomes.
PMID:35383171
Downregulation of KRAB zinc finger proteins in 5-fluorouracil resistant colorectal cancer cells.
PMID:35379199
Characterization of the Secretome, Transcriptome, and Proteome of Human β Cell Line EndoC-βH1.
PMID:35378291
Spirocyclic dimer SpiD7 activates the unfolded protein response to selectively inhibit growth and induce apoptosis of cancer cells.
PMID:35378132
Proteasome complexes experience profound structural and functional rearrangements throughout mammalian spermatogenesis.
PMID:35377789
Proteomic Response Revealed Signaling Pathways Involving in the Mechanism of Polymyxin B-Induced Melanogenesis.
PMID:35377227
The HSP40 chaperone Ydj1 drives amyloid beta 42 toxicity.
PMID:35373908
Host Immune Responses to Salivary Components - A Critical Facet of Tick-Host Interactions.
PMID:35372098
The Lack of Dopamine Transporter Is Associated With Conditional Associative Learning Impairments and Striatal Proteomic Changes.
PMID:35370807
Immunopeptidomic analyses of colorectal cancers with and without microsatellite instability.
PMID:35367648
Discovery of a signaling feedback circuit that defines interferon responses in myeloproliferative neoplasms.
PMID:35365653
Class I HDAC overexpression promotes temozolomide resistance in glioma cells by regulating RAD18 expression.
PMID:35365623
Current progress and open challenges for applying deep learning across the biosciences.
PMID:35365602
Computational analyses of mechanism of action (MoA): data, methods and integration.
PMID:35360890
Arabidopsis Iron Superoxide Dismutase FSD1 Protects Against Methyl Viologen-Induced Oxidative Stress in a Copper-Dependent Manner.
PMID:35360337
Extracellular Vesicles From LPS-Treated Macrophages Aggravate Smooth Muscle Cell Calcification by Propagating Inflammation and Oxidative Stress.
PMID:35356285
A comprehensive LFQ benchmark dataset on modern day acquisition strategies in proteomics.
PMID:35354825
Quantitative proteomic analysis of bronchoalveolar lavage fluid in West Highland white terriers with canine idiopathic pulmonary fibrosis.
PMID:35354473
Kinase domain autophosphorylation rewires the activity and substrate specificity of CK1 enzymes.
PMID:35353987
Comprehensive spectral libraries for various rabbit eye tissue proteomes.
PMID:35351915
K27-linked ubiquitylation promotes p97 substrate processing and is essential for cell proliferation.
PMID:35349166
Protein folding stabilities are a major determinant of oxidation rates for buried methionine residues.
PMID:35346688
Decoding the Absolute Stoichiometric Composition and Structural Plasticity of α-Carboxysomes.
PMID:35343789
Proteomic Identification of a Gastric Tumor ECM Signature Associated With Cancer Progression.
PMID:35340765
Discovery of Proteins Responsible for Resistance to Three Chemotherapy Drugs in Breast Cancer Cells Using Proteomics and Bioinformatics Analysis.
PMID:35335125
Genome-wide screening identifies Polycomb repressive complex 1.3 as an essential regulator of human naïve pluripotent cell reprogramming.
PMID:35333572
An infection-induced oxidation site regulates legumain processing and tumor growth.
PMID:35332331
Sulforaphane suppresses metastasis of triple-negative breast cancer cells by targeting the RAF/MEK/ERK pathway.
PMID:35332167
UBR4/POE facilitates secretory trafficking to maintain circadian clock synchrony.
PMID:35332162
Fe3+-NTA magnetic beads as an alternative to spin column-based phosphopeptide enrichment.
PMID:35331916
Non-Apoptotic Caspase Activity Preferentially Targets a Novel Consensus Sequence Associated With Cytoskeletal Proteins in the Developing Auditory Brainstem.
PMID:35330912
Viewing Cortical Collecting Duct Function Through Phenotype-guided Single-Tubule Proteomics.
PMID:35330743
Alteration of Serum Proteome in Levo-Thyroxine-Euthyroid Thyroidectomized Patients.
PMID:35330001
Hepatocyte Proteome Alterations Induced by Individual and Combinations of Common Free Fatty Acids.
PMID:35328776
ABPP-HT*-Deep Meets Fast for Activity-Based Profiling of Deubiquitylating Enzymes Using Advanced DIA Mass Spectrometry Methods.
PMID:35328685
The Proteome of Antibody-Mediated Rejection: From Glomerulitis to Transplant Glomerulopathy.
PMID:35327371
CDK6 Degradation Is Counteracted by p16INK4A and p18INK4C in AML.
PMID:35326705
The Preclinical Evaluation of a Second-Generation Antivenom for Treating Snake Envenoming in India.
PMID:35324665
Identification and Characterization of Three Chitinases with Potential in Direct Conversion of Crystalline Chitin into N,N'-diacetylchitobiose.
PMID:35323464
Altered proteome in translation initiation fidelity defective eIF5G31R mutant causes oxidative stress and DNA damage.
PMID:35322093
Adipose Dysfunction in Adulthood Insulin Resistance of Low-Birth Weight Mice: A Proteomics Study.
PMID:35321351
Restriction factor screening identifies RABGAP1L-mediated disruption of endocytosis as a host antiviral defense.
PMID:35320721
KCNQ2 and KCNQ5 form heteromeric channels independent of KCNQ3.
PMID:35320039
Data-independent acquisition mass spectrometry in severe rheumatic heart disease (RHD) identifies a proteomic signature showing ongoing inflammation and effectively classifying RHD cases.
PMID:35317720
Mycobacterium tuberculosis encodes a YhhN family membrane protein with lysoplasmalogenase activity that protects against toxic host lysolipids.
PMID:35314194
Proteomic profiling of hydatid fluid from pulmonary cystic echinococcosis.
PMID:35313982
Hyperosmolality in CHO cell culture: effects on the proteome.
PMID:35312825
Phosphorylation of SHP2 at Tyr62 Enables Acquired Resistance to SHP2 Allosteric Inhibitors in FLT3-ITD-Driven AML.
PMID:35311954
Deciphering Black Extrinsic Tooth Stain Composition in Children Using Metaproteomics.
PMID:35309464
Drug-like molecules with anti-trypanothione synthetase activity identified by high throughput screening.
PMID:35306933
Beta-blocker/ACE inhibitor therapy differentially impacts the steady state signaling landscape of failing and non-failing hearts.
PMID:35306519
Repositioning of a Diaminothiazole Series Confirmed to Target the Cyclin-Dependent Kinase CRK12 for Use in the Treatment of African Animal Trypanosomiasis.
PMID:35303411
Shotgun and TMT-Labeled Proteomic Analysis of the Ovarian Proteins of an Insect Vector, Aedes aegypti (Diptera: Culicidae).
PMID:35303100
Morphine-induced modulation of Nrf2-antioxidant response element signaling pathway in primary human brain microvascular endothelial cells.
PMID:35301408
Indisulam targets RNA splicing and metabolism to serve as a therapeutic strategy for high-risk neuroblastoma.
PMID:35296644
Spatial proteomics finds CD155 and Endophilin-A1 as mediators of growth and invasion in medulloblastoma.
PMID:35296518
Liquid Chromatography-Tandem Mass Spectrometry Analysis Demonstrates a Decrease in Porins and Increase in CMY-2 β-Lactamases in Escherichia coli Exposed to Increasing Concentrations of Meropenem.
PMID:35295306
Experimental evolution links post-transcriptional regulation to Leishmania fitness gain.
PMID:35294501
Galectin-1 prevents pathological vascular remodeling in atherosclerosis and abdominal aortic aneurysm.
PMID:35294231
Characterization of a highly diverged mitochondrial ATP synthase Fo subunit in Trypanosoma brucei.
PMID:35293314
BRCA1 mutations in high-grade serous ovarian cancer are associated with proteomic changes in DNA repair, splicing, transcription regulation and signaling.
PMID:35292711
Functional characterization of the human Cdk10/Cyclin Q complex.
PMID:35291876
Migraine-Associated Mutation in the Na,K-ATPase Leads to Disturbances in Cardiac Metabolism and Reduced Cardiac Function.
PMID:35289188
Time-series transcriptomics and proteomics reveal alternative modes to decode p53 oscillations.
PMID:35285572
Visualisation of proteome-wide ordered protein abundances in Trypanosoma brucei.
PMID:35284642
Visualisation of experimentally determined and predicted protein N-glycosylation and predicted glycosylphosphatidylinositol anchor addition in Trypanosoma brucei.
PMID:35284639
Stoichiometry of the Gene Products From the Tetrachloroethene Reductive Dehalogenase Operon pceABCT.
PMID:35283847
Streptococcus pneumoniae and Influenza A Virus Co-Infection Induces Altered Polyubiquitination in A549 Cells.
PMID:35281454
Recurrent Co-Option and Recombination of Cytokine and Three Finger Proteins in Multiple Reproductive Tissues Throughout Salamander Evolution.
PMID:35281090
The methyl phosphate capping enzyme Bmc1/Bin3 is a stable component of the fission yeast telomerase holoenzyme.
PMID:35277511
Leveraging Parameter Dependencies in High-Field Asymmetric Waveform Ion-Mobility Spectrometry and Size Exclusion Chromatography for Proteome-wide Cross-Linking Mass Spectrometry.
PMID:35276035
Progressive axonopathy when oligodendrocytes lack the myelin protein CMTM5.
PMID:35274615
Conserved exchange of paralog proteins during neuronal differentiation.
PMID:35273078
Identification and characterization of the key enzyme in the biosynthesis of the neurotoxin β-ODAP in grass pea.
PMID:35271851
Reduction in Phosphoribulokinase Amount and Re-Routing Metabolism in Chlamydomonas reinhardtii CP12 Mutants.
PMID:35269851
Protein Expression of AEBP1, MCM4, and FABP4 Differentiate Osteogenic, Adipogenic, and Mesenchymal Stromal Stem Cells.
PMID:35269711
Red-Fleshed Apples Rich in Anthocyanins and White-Fleshed Apples Modulate the Aorta and Heart Proteome in Hypercholesterolaemic Rats: The AppleCOR Study.
PMID:35268023
Tryptophan depletion results in tryptophan-to-phenylalanine substitutants.
PMID:35264796
Co-translational assembly orchestrates competing biogenesis pathways.
PMID:35264577
Sirtuin-1 sensitive lysine-136 acetylation drives phase separation and pathological aggregation of TDP-43.
PMID:35264561
Linkage reprogramming by tailor-made E3s reveals polyubiquitin chain requirements in DNA-damage bypass.
PMID:35263628
G-quadruplex inducer/stabilizer pyridostatin targets SUB1 to promote cytotoxicity of a transplatinum complex.
PMID:35258624
Cell-surface tethered promiscuous biotinylators enable comparative small-scale surface proteomic analysis of human extracellular vesicles and cells.
PMID:35257663
HLA-A*11:01-restricted CD8+ T cell immunity against influenza A and influenza B viruses in Indigenous and non-Indigenous people.
PMID:35255101
A new mass spectral library for high-coverage and reproducible analysis of the Plasmodium falciparum-infected red blood cell proteome.
PMID:35254426
Proteome dataset of sea bass (Dicentrarchus labrax) skin-scales exposed to fluoxetine and estradiol.
PMID:35252491
Unexpected Arabinosylation after Humanization of Plant Protein N-Glycosylation.
PMID:35252146
An Integrative Multiomics Approach to Characterize Prebiotic Inulin Effects on Faecalibacterium prausnitzii.
PMID:35252133
Inward Outward Signaling in Ovarian Cancer: Morpho-Phospho-Proteomic Profiling Upon Application of Hypoxia and Shear Stress Characterizes the Adaptive Plasticity of OVCAR-3 and SKOV-3 Cells.
PMID:35251951
Proteome and Network Analysis Provides Novel Insights Into Developing and Established Chemotherapy-Induced Peripheral Neuropathy.
PMID:35250568
Plasma proteome changes linked to late phase response after inhaled allergen challenge in asthmatics.
PMID:35248034
Identification and characterization of Crumbs polarity complex proteins in Caenorhabditis elegans.
PMID:35247383
Landscape of adenosine-to-inosine RNA recoding across human tissues.
PMID:35246538
White matter integrity in mice requires continuous myelin synthesis at the inner tongue.
PMID:35246535
In-Depth Profiling of O-Glycan Isomers in Human Cells Using C18 Nanoliquid Chromatography-Mass Spectrometry and Glycogenomics.
PMID:35245040
SU086, an inhibitor of HSP90, impairs glycolysis and represents a treatment strategy for advanced prostate cancer.
PMID:35243415
Proteomics and image screening data of cellular secretomes and their biological effects: Comparing the signals sent by cardiac stromal cells and dermal fibroblasts in culture.
PMID:35242943
Plasma proteomics data from hibernating and active Scandinavian brown bears.
PMID:35242939
Proteomic analysis distinguishes extracellular vesicles produced by cancerous versus healthy pancreatic organoids.
PMID:35241737
NMD is required for timely cell fate transitions by fine-tuning gene expression and regulating translation.
PMID:35241478
Diverse events have transferred genes for edible seaweed digestion from marine to human gut bacteria.
PMID:35240043
Upstream open reading frames regulate translation of cancer-associated transcripts and encode HLA-presented immunogenic tumor antigens.
PMID:35239002
Eukaryotic catecholamine hormones influence the chemotactic control of Vibrio campbellii by binding to the coupling protein CheW.
PMID:35238645
Two zinc finger proteins with functions in m6A writing interact with HAKAI.
PMID:35236848
FAIMS Enhances the Detection of PTM Crosstalk Sites.
PMID:35235327
CFIm-mediated alternative polyadenylation remodels cellular signaling and miRNA biogenesis.
PMID:35234914
Novel protein markers of androgen activity in humans: proteomic study of plasma from young chemically castrated men.
PMID:35230239
Mitochondrial Dysfunction in Rabies Virus-Infected Human and Canine Brains.
PMID:35229271
Gut Commensal Bacteroidetes Encode a Novel Class of Vitamin B12-Binding Proteins.
PMID:35227073
Bovine Peripheral Blood Derived Lymphocyte Proteome and Secretome Show Divergent Reaction of Bovine Immune Phenotypes after Stimulation with Pokeweed Mitogen.
PMID:35225986
Activation of regulatory T cells triggers specific changes in glycosylation associated with Siglec-1-dependent inflammatory responses.
PMID:35224210
Proteomic Signatures of Antimicrobial Resistance in Yersinia pestis and Francisella tularensis.
PMID:35223919
Silencing of Opisthorchis viverrini Tetraspanin Gene Expression Results in Reduced Secretion of Extracellular Vesicles.
PMID:35223551
Characterization of Metronidazole-Resistant Giardia intestinalis Lines by Comparative Transcriptomics and Proteomics.
PMID:35222342
Cell Membrane Remodeling Mediates Polymyxin B Resistance in Klebsiella pneumoniae: An Integrated Proteomics and Metabolomics Study.
PMID:35222333
Ecological Interactions of Cyanobacteria and Heterotrophs Enhances the Robustness of Cyanobacterial Consortium for Carbon Sequestration.
PMID:35222325
SP3-Enabled Rapid and High Coverage Chemoproteomic Identification of Cell-State-Dependent Redox-Sensitive Cysteines.
PMID:35219905
A mechanism of origin licensing control through autoinhibition of S. cerevisiae ORC·DNA·Cdc6.
PMID:35217664
Hypoxia Is a Dominant Remodeler of the Effector T Cell Surface Proteome Relative to Activation and Regulatory T Cell Suppression.
PMID:35217172
A blood atlas of COVID-19 defines hallmarks of disease severity and specificity.
PMID:35216673
Chemical probing provides insight into the native assembly state of a bacterial microcompartment.
PMID:35216657
Review of Liquid Chromatography-Mass Spectrometry-Based Proteomic Analyses of Body Fluids to Diagnose Infectious Diseases.
PMID:35216306
Micro-RNA and Proteomic Profiles of Plasma-Derived Exosomes from Irradiated Mice Reveal Molecular Changes Preventing Apoptosis in Neonatal Cerebellum.
PMID:35216284
The Nitrobenzoxadiazole Derivative NBDHEX Behaves as Plasmodium falciparum Gametocyte Selective Inhibitor with Malaria Parasite Transmission Blocking Activity.
PMID:35215282
Causal reasoning over knowledge graphs leveraging drug-perturbed and disease-specific transcriptomic signatures for drug discovery.
PMID:35213534
Protein with negative surface charge distribution, Bnr1, shows characteristics of a DNA-mimic protein and may be involved in the adaptation of Burkholderia cenocepacia.
PMID:35212475
A tRNA modifying enzyme as a tunable regulatory nexus for bacterial stress responses and virulence.
PMID:35212379
Virulence Biomarkers of Bursaphelenchus xylophilus: A Proteomic Approach.
PMID:35211137
Identification of distinct cytotoxic granules as the origin of supramolecular attack particles in T lymphocytes.
PMID:35210420
Mitochondrial COA7 is a heme-binding protein with disulfide reductase activity, which acts in the early stages of complex IV assembly.
PMID:35210360
Plasma Proteomic Changes of Atherosclerosis after Exercise in ApoE Knockout Mice.
PMID:35205118
Nitric Oxide Resistance in Leishmania (Viannia) braziliensis Involves Regulation of Glucose Consumption, Glutathione Metabolism and Abundance of Pentose Phosphate Pathway Enzymes.
PMID:35204161
Cycloastragenol Inhibits Experimental Abdominal Aortic Aneurysm Progression.
PMID:35203568
Cannabinoids Reduce Extracellular Vesicle Release from HIV-1 Infected Myeloid Cells and Inhibit Viral Transcription.
PMID:35203372
In-Depth Matrisome and Glycoproteomic Analysis of Human Brain Glioblastoma Versus Control Tissue.
PMID:35202840
Targeting DNA topoisomerases or checkpoint kinases results in an overload of chaperone systems, triggering aggregation of a metastable subproteome.
PMID:35200138
Tailored Pyridoxal Probes Unravel Novel Cofactor-Dependent Targets and Antibiotic Hits in Critical Bacterial Pathogens.
PMID:35199904
Spotlight on alternative frame coding: Two long overlapping genes in Pseudomonas aeruginosa are translated and under purifying selection.
PMID:35198897
The proteomic profile of the human myotendinous junction.
PMID:35198892
Nrf2 activation reprograms macrophage intermediary metabolism and suppresses the type I interferon response.
PMID:35198887
Evidence for a trap-and-flip mechanism in a proton-dependent lipid transporter.
PMID:35197476
Protective immune trajectories in early viral containment of non-pneumonic SARS-CoV-2 infection.
PMID:35197461
Proteomic profiling reveals CDK6 upregulation as a targetable resistance mechanism for lenalidomide in multiple myeloma.
PMID:35197447
Stratification of follicular thyroid tumours using data-independent acquisition proteomics and a comprehensive thyroid tissue spectral library.
PMID:35194950
A deeper look at carrier proteome effects for single-cell proteomics.
PMID:35194133
A synthetic protein as efficient multitarget regulator against complement over-activation.
PMID:35194132
Proteome analysis of the Gram-positive fish pathogen Renibacterium salmoninarum reveals putative role of membrane vesicles in virulence.
PMID:35194033
Illumination of the Endogenous Insulin-Regulated TBC1D4 Interactome in Human Skeletal Muscle.
PMID:35192682
Intercepting IRE1 kinase-FMRP signaling prevents atherosclerosis progression.
PMID:35191199
The intrinsically disordered TSSC4 protein acts as a helicase inhibitor, placeholder and multi-interaction coordinator during snRNP assembly and recycling.
PMID:35188580
The transient Spt4-Spt5 complex as an upstream regulator of non-coding RNAs during development.
PMID:35188560
Database search engines and target database features impinge upon the identification of post-translationally cis-spliced peptides in HLA class I immunopeptidomes.
PMID:35184383
Transcription factor protein interactomes reveal genetic determinants in heart disease.
PMID:35182466
Deficiency of Parkinson's Related Protein DJ-1 Alters Cdk5 Signalling and Induces Neuronal Death by Aberrant Cell Cycle Re-entry.
PMID:35182267
Regulated cell death joins in atherosclerotic plaque silent progression.
PMID:35181730
Mapping Proteome Changes in Microsatellite Stable, Recurrent Colon Cancer Reveals a Significant Immune System Signature.
PMID:35181583
Sequence and structural variations determining the recruitment of WNK kinases to the KLHL3 E3 ligase.
PMID:35179207
Extracellular degradation of a polyurethane oligomer involving outer membrane vesicles and further insights on the degradation of 2,4-diaminotoluene in Pseudomonas capeferrum TDA1.
PMID:35177693
CPEB1 directs muscle stem cell activation by reprogramming the translational landscape.
PMID:35177647
Kansl1 haploinsufficiency impairs autophagosome-lysosome fusion and links autophagic dysfunction with Koolen-de Vries syndrome in mice.
PMID:35177641
HIV-1 and methamphetamine alter galectins -1, -3, and -9 in human monocyte-derived macrophages.
PMID:35175539
Proteomic analysis of archival breast cancer clinical specimens identifies biological subtypes with distinct survival outcomes.
PMID:35173148
Proteomics Indicates Lactate Dehydrogenase Is Prognostic in Acetaminophen-Induced Acute Liver Failure Patients and Reveals Altered Signaling Pathways.
PMID:35172013
A balanced Oct4 interactome is crucial for maintaining pluripotency.
PMID:35171666
M24B aminopeptidase inhibitors selectively activate the CARD8 inflammasome.
PMID:35165443
Metabolic determination of cell fate through selective inheritance of mitochondria.
PMID:35165416
Integrative omics reveals subtle molecular perturbations following ischemic conditioning in a porcine kidney transplant model.
PMID:35164671
Evaluation of Fast and Sensitive Proteome Profiling of FF and FFPE Kidney Patient Tissues.
PMID:35164409
Unravelling the Helianthus tuberosus L. (Jerusalem Artichoke, Kiku-Imo) Tuber Proteome by Label-Free Quantitative Proteomics.
PMID:35164374
ERAP2 Inhibition Induces Cell-Surface Presentation by MOLT-4 Leukemia Cancer Cells of Many Novel and Potentially Antigenic Peptides.
PMID:35163832
Multiple Abiotic Stresses Applied Simultaneously Elicit Distinct Responses in Two Contrasting Rice Cultivars.
PMID:35163659
Cyclophilin A Is Not Acetylated at Lysine-82 and Lysine-125 in Resting and Stimulated Platelets.
PMID:35163387
Abiotic Stress and Belowground Microbiome: The Potential of Omics Approaches.
PMID:35163015
Mapping PP1c and Its Inhibitor 2 Interactomes Reveals Conserved and Specific Networks in Asexual and Sexual Stages of Plasmodium.
PMID:35162991
Differential Protein Expression in Berry Skin from Red Grapes with Varying Hybrid Character.
PMID:35162980
Spatial Proteomic Analysis of Isogenic Metastatic Colorectal Cancer Cells Reveals Key Dysregulated Proteins Associated with Lymph Node, Liver, and Lung Metastasis.
PMID:35159257
Site-Specific Profiling of 4-Thiouridine Across Transfer RNA Genes in Escherichia coli.
PMID:35155896
Molecular Architecture of the Antiophidic Protein DM64 and its Binding Specificity to Myotoxin II From Bothrops asper Venom.
PMID:35155563
Interaction of transcription factor FoxO3 with histone acetyltransferase complex subunit TRRAP modulates gene expression and apoptosis.
PMID:35151693
Allosteric control of Ubp6 and the proteasome via a bidirectional switch.
PMID:35149681
Dynamics of huntingtin protein interactions in the striatum identifies candidate modifiers of Huntington disease.
PMID:35148841
Thermodynamics contributes to high limonene productivity in cyanobacteria.
PMID:35145855
Secreted Toxins From Staphylococcus aureus Strains Isolated From Keratinocyte Skin Cancers Mediate Pro-tumorigenic Inflammatory Responses in the Skin.
PMID:35145494
Whole-cell modeling in yeast predicts compartment-specific proteome constraints that drive metabolic strategies.
PMID:35145105
Quantitative proteomic analysis of serum-purified exosomes identifies putative pre-eclampsia-associated biomarkers.
PMID:35144530
A novel mistranslating tRNA model in Drosophila melanogaster has diverse, sexually dimorphic effects.
PMID:35143655
Cell biological analysis reveals an essential role for Pfcerli2 in erythrocyte invasion by malaria parasites.
PMID:35140336
A comprehensive landscape of 60S ribosome biogenesis factors.
PMID:35139378
Complementary proteome and glycoproteome access revealed through comparative analysis of reversed phase and porous graphitic carbon chromatography.
PMID:35137243
Age-related long-term response in rat thyroid tissue and plasma after internal low dose exposure to 131I.
PMID:35136135
Membrane-associated cytoplasmic granules carrying the Argonaute protein WAGO-3 enable paternal epigenetic inheritance in Caenorhabditis elegans.
PMID:35132225
Secreted protein markers in oral squamous cell carcinoma (OSCC).
PMID:35130834
Proteomic Changes in the Monolayer and Spheroid Melanoma Cell Models of Acquired Resistance to BRAF and MEK1/2 Inhibitors.
PMID:35128241
Proteome data of neuroblastoma cells overexpressing Neuroglobin.
PMID:35128003
Isotopic N,N-dimethyl leucine tags for absolute quantification of clusterin and apolipoprotein E in Alzheimer's disease.
PMID:35124278
Sex-related differential susceptibility to ponatinib cardiotoxicity and differential modulation of the Notch1 signalling pathway in a murine model.
PMID:35122387
A tumor-derived type III collagen-rich ECM niche regulates tumor cell dormancy.
PMID:35121989
IRS1 phosphorylation underlies the non-stochastic probability of cancer cells to persist during EGFR inhibition therapy.
PMID:35121883
Optimization of small extracellular vesicle isolation from expressed prostatic secretions in urine for in-depth proteomic analysis.
PMID:35119778
Surgical Trauma in Mice Modifies the Content of Circulating Extracellular Vesicles.
PMID:35116043
Exploring the Multi-Tissue Crosstalk Relevant to Insulin Resistance Through Network-Based Analysis.
PMID:35116003
Polypyrimidine tract binding proteins PTBP1 and PTBP2 interact with distinct proteins under splicing conditions.
PMID:35113929
Proteomics Study Reveals the Anti-Depressive Mechanisms and the Compatibility Advantage of Chaihu-Shugan-San in a Rat Model of Chronic Unpredictable Mild Stress.
PMID:35111057
Proteomic landscape of SARS-CoV-2- and MERS-CoV-infected primary human renal epithelial cells.
PMID:35110370
Multiplexed Isobaric Quantitative Cross-Linking Reveals Drug-Induced Interactome Changes in Breast Cancer Cells.
PMID:35107270
Understanding saffron biology using omics- and bioinformatics tools: stepping towards a better Crocus phenome.
PMID:35106686
Optimization of proteomics sample preparation for identification of host and bacterial proteins in mouse feces.
PMID:35106611
Deep models of integrated multiscale molecular data decipher the endothelial cell response to ionizing radiation.
PMID:35106469
Cyclic AMP signalling and glucose metabolism mediate pH taxis by African trypanosomes.
PMID:35105902
SARS-CoV-2 genomes from Saudi Arabia implicate nucleocapsid mutations in host response and increased viral load.
PMID:35105893
Cytoplasmic switch of ARS2 isoforms promotes nonsense-mediated mRNA decay and arsenic sensitivity.
PMID:35104878
A Deep-Sea Bacterium Senses Blue Light via a BLUF-Dependent Pathway.
PMID:35103488
Agonist-induced phosphorylation of orthologues of the orphan receptor GPR35 functions as an activation sensor.
PMID:35101446
Modeling the CRL4A ligase complex to predict target protein ubiquitination induced by cereblon-recruiting PROTACs.
PMID:35101445
Citrobacter rodentium Infection Induces Persistent Molecular Changes and Interferon Gamma-Dependent Major Histocompatibility Complex Class II Expression in the Colonic Epithelium.
PMID:35100877
Vimentin binds to G-quadruplex repeats found at telomeres and gene promoters.
PMID:35100428
A20 and ABIN-1 cooperate in balancing CBM complex-triggered NF-κB signaling in activated T cells.
PMID:35099607
Subcellular proteomics of dopamine neurons in the mouse brain.
PMID:35098924
Protein signatures to distinguish aggressive from indolent prostate cancer.
PMID:35098564
Complexome Profiling-Exploring Mitochondrial Protein Complexes in Health and Disease.
PMID:35096826
Campylobacter jejuni Virulence Factors Identified by Modulating Their Synthesis on Ribosomes With Altered rRNA Methylation.
PMID:35096652
N-glycosylation regulates MET processing and signaling.
PMID:35092134
MITF activity is regulated by a direct interaction with RAF proteins in melanoma cells.
PMID:35091687
An advanced method for the release, enrichment and purification of high-quality Arabidopsis thaliana rosette leaf trichomes enables profound insights into the trichome proteome.
PMID:35086542
Proteomic profiling of cisplatin-resistant and cisplatin-sensitive germ cell tumour cell lines using quantitative mass spectrometry.
PMID:35084545
Brahma safeguards canalization of cardiac mesoderm differentiation.
PMID:35082446
Function-guided proximity mapping unveils electrophilic-metabolite sensing by proteins not present in their canonical locales.
PMID:35082156
Ovarian carcinoma immunoreactive antigen-like protein 2 (OCIAD2) is a novel complex III-specific assembly factor in mitochondria.
PMID:35080992
Substrate-bound and substrate-free outward-facing structures of a multidrug ABC exporter.
PMID:35080979
Potential Tear Biomarkers for the Diagnosis of Parkinson's Disease-A Pilot Study.
PMID:35076620
Kidney organoids recapitulate human basement membrane assembly in health and disease.
PMID:35076391
Tear proteomics reveals the molecular basis of the efficacy of human recombinant nerve growth factor treatment for Neurotrophic Keratopathy.
PMID:35075190
Oxidative desulfurization pathway for complete catabolism of sulfoquinovose by bacteria.
PMID:35074914
SMARCA5 interacts with NUP98-NSD1 oncofusion protein and sustains hematopoietic cells transformation.
PMID:35073946
Ceragenins and Antimicrobial Peptides Kill Bacteria through Distinct Mechanisms.
PMID:35073755
Urine Proteomics for Noninvasive Monitoring of Biomarkers in Bronchopulmonary Dysplasia.
PMID:35073553
Biological and Molecular Effects of Trypanosoma cruzi Residence in a LAMP-Deficient Intracellular Environment.
PMID:35071040
To New Beginnings: Riboproteogenomics Discovery of N-Terminal Proteoforms in Arabidopsis Thaliana.
PMID:35069635
Lipid droplet-mitochondria coupling via perilipin 5 augments respiratory capacity but is dispensable for FA oxidation.
PMID:35065923
SFPQ-ABL1 and BCR-ABL1 use different signaling networks to drive B-cell acute lymphoblastic leukemia.
PMID:35061886
Fasting improves therapeutic response in hepatocellular carcinoma through p53-dependent metabolic synergism.
PMID:35061544
Overexpression of Parkin in clear cell renal cell carcinoma decreases tumor aggressiveness by regulating CKS2 levels.
PMID:35059737
Biallelic Variants in PYROXD2 Cause a Severe Infantile Metabolic Disorder Affecting Mitochondrial Function.
PMID:35055180
ERK1/2 Activity Is Critical for the Outcome of Ischemic Stroke.
PMID:35054890
The Periplasmic Oxidoreductase DsbA Is Required for Virulence of the Phytopathogen Dickeya solani.
PMID:35054882
Three Microbial Musketeers of the Seas: Shewanella baltica, Aliivibrio fischeri and Vibrio harveyi, and Their Adaptation to Different Salinity Probed by a Proteomic Approach.
PMID:35054801
Proteomic Response of Deinococcus radiodurans to Short-Term Real Microgravity during Parabolic Flight Reveals Altered Abundance of Proteins Involved in Stress Response and Cell Envelope Functions.
PMID:35054415
Identification of the Cysteine Protease Legumain as a Potential Chronic Hypoxia-Specific Multiple Myeloma Target Gene.
PMID:35053409
Revisiting the Non-Coding Nature of Pospiviroids.
PMID:35053381
Quantitative Insights into the Contribution of Nematocysts to the Adaptive Success of Cnidarians Based on Proteomic Analysis.
PMID:35053089
Effects of Erythrodiol on the Antioxidant Response and Proteome of HepG2 Cells.
PMID:35052578
Immunopeptidomic analysis of influenza A virus infected human tissues identifies internal proteins as a rich source of HLA ligands.
PMID:35051231
An Integrative Sialomic Analysis Reveals Molecules From Triatoma sordida (Hemiptera: Reduviidae).
PMID:35047420
A phase 2 single center open label randomised control trial for convalescent plasma therapy in patients with severe COVID-19.
PMID:35046397
Parkinson's disease protein PARK7 prevents metabolite and protein damage caused by a glycolytic metabolite.
PMID:35046029
Comparative analysis of ChAdOx1 nCoV-19 and Ad26.COV2.S SARS-CoV-2 vector vaccines.
PMID:35045692
Interrogating Kinase-Substrate Relationships with Proximity Labeling and Phosphorylation Enrichment.
PMID:35044772
A bipartite chromatophore transit peptide and N-terminal protein processing in the Paulinella chromatophore.
PMID:35043947
Proteomic profiling identifies novel diagnostic biomarkers and molecular subtypes for mucinous tubular and spindle cell carcinoma of the kidney.
PMID:35043389
Deciphering the mechanism of processive ssDNA digestion by the Dna2-RPA ensemble.
PMID:35042867
A network of Gαi signaling partners is revealed by proximity labeling proteomics analysis and includes PDZ-RhoGEF.
PMID:35041463
Truncated PARP1 mediates ADP-ribosylation of RNA polymerase III for apoptosis.
PMID:35039483
The Role of Antibiotic Resistance Genes in the Fitness Cost of Multiresistance Plasmids.
PMID:35038907
Comment on: The m6A Reader IGF2BP2 Regulates Macrophage Phenotypic Activation and Inflammatory Diseases by Stabilizing TSC1 and PPARγ.
PMID:35038236
Discrimination of Tilletia controversa from the T. caries/T. laevis complex by MALDI-TOF MS analysis of teliospores.
PMID:35037998
Methyl-lysine readers PHF20 and PHF20L1 define two distinct gene expression-regulating NSL complexes.
PMID:35033534
Comparative secretome analysis of Staphylococcus aureus strains with different within-herd intramammary infection prevalence.
PMID:35030987
NuA4 and H2A.Z control environmental responses and autotrophic growth in Arabidopsis.
PMID:35022409
Genetic alterations of the SUMO isopeptidase SENP6 drive lymphomagenesis and genetic instability in diffuse large B-cell lymphoma.
PMID:35022408
Danger signal extracellular calcium initiates differentiation of monocytes into SPP1/osteopontin-producing macrophages.
PMID:35022393
Integrated Proteomics-Based Physical and Functional Mapping of AXL Kinase Signaling Pathways and Inhibitors Define Its Role in Cell Migration.
PMID:35022314
Targeted Profiling of Epitranscriptomic Reader, Writer, and Eraser Proteins Accompanied with Radioresistance in Breast Cancer Cells.
PMID:35021009
Current status of PTMs structural databases: applications, limitations and prospects.
PMID:35020020
Regulating peroxisome-ER contacts via the ACBD5-VAPB tether by FFAT motif phosphorylation and GSK3β.
PMID:35019937
The C-Terminal Domains of the PB2 Subunit of the Influenza A Virus RNA Polymerase Directly Interact with Cellular GTPase Rab11a.
PMID:35019720
Comparing the contents, functions and neonicotinoid take-up between floral and extrafloral nectar within a single species (Hemerocallis citrina Baroni).
PMID:35018412
Trans cohort metabolic reprogramming towards glutaminolysis in long-term successfully treated HIV-infection.
PMID:35017663
B cells imprint adoptively transferred CD8+ T cells with enhanced tumor immunity.
PMID:35017148
Accurate and Automated High-Coverage Identification of Chemically Cross-Linked Peptides with MaxLynx.
PMID:35014260
THEM6-mediated reprogramming of lipid metabolism supports treatment resistance in prostate cancer.
PMID:35014179
The ubiquitin-dependent ATPase p97 removes cytotoxic trapped PARP1 from chromatin.
PMID:35013556
Hypocrates is a genetically encoded fluorescent biosensor for (pseudo)hypohalous acids and their derivatives.
PMID:35013284
Microbial enzymes induce colitis by reactivating triclosan in the mouse gastrointestinal tract.
PMID:35013263
Grainyhead 1 acts as a drug-inducible conserved transcriptional regulator linked to insulin signaling and lifespan.
PMID:35013237
Topographic mapping of the glioblastoma proteome reveals a triple-axis model of intra-tumoral heterogeneity.
PMID:35013227
The catalytic activity of TCPTP is auto-regulated by its intrinsically disordered tail and activated by Integrin alpha-1.
PMID:35013194
Altered succinylation of mitochondrial proteins, APP and tau in Alzheimer's disease.
PMID:35013160
Time series proteome profile analysis reveals a protective role of citrate synthase in angiotensin II-induced atrial fibrillation.
PMID:35013064
Extracellular Vesicles from Pancreatic Cancer Stem Cells Lead an Intratumor Communication Network (EVNet) to fuel tumour progression.
PMID:35012996
The interactome of CLUH reveals its association to SPAG5 and its co-translational proximity to mitochondrial proteins.
PMID:35012549
Role of Nse1 Subunit of SMC5/6 Complex as a Ubiquitin Ligase.
PMID:35011726
Altered Ca2+ Homeostasis in Red Blood Cells of Polycythemia Vera Patients Following Disturbed Organelle Sorting during Terminal Erythropoiesis.
PMID:35011611
The Omics Hunt for Novel Molecular Markers of Resistance to Phytophthora infestans.
PMID:35009065
Insights into the Structure and Protein Composition of Moorella thermoacetica Spores Formed at Different Temperatures.
PMID:35008975
Comparative O-GlcNAc Proteomic Analysis Reveals a Role of O-GlcNAcylated SAM68 in Lung Cancer Aggressiveness.
PMID:35008409
Proteomic identification of proliferation and progression markers in human polycythemia vera stem and progenitor cells.
PMID:35008095
Interactome Analysis of Human Phospholipase D and Phosphatidic Acid-Associated Protein Network.
PMID:35007762
Hyperinflammatory environment drives dysfunctional myeloid cell effector response to bacterial challenge in COVID-19.
PMID:35007290
Integrative proteo-transcriptomic and immunophenotyping signatures of HIV-1 elite control phenotype: A cross-talk between glycolysis and HIF signaling.
PMID:35005552
Proteomics Investigations of Potential Protein Biomarkers in Sera of Rabbits Infected With Schistosoma japonicum.
PMID:35004354
Comparative Proteomic Profiling Identifies Reciprocal Expression of Mitochondrial Proteins Between White and Gray Matter Lesions From Multiple Sclerosis Brains.
PMID:35002930
Calpain-mediated protein targets in cardiac mitochondria following ischemia-reperfusion.
PMID:34997008
FASN-dependent de novo lipogenesis is required for brain development.
PMID:34996870
Circulating microvesicles and exosomes in small cell lung cancer by quantitative proteomics.
PMID:34996345
Off-target inhibition of NGLY1 by the polycaspase inhibitor Z-VAD-fmk induces cellular autophagy.
PMID:34995415
Deconstructing Methanosarcina acetivorans into an acetogenic archaeon.
PMID:34992140
Protection of the Prodomain α1-Helix Correlates with Latency in the Transforming Growth Factor-β Family.
PMID:34990654
The Aquatic Invertebrate Hydra vulgaris Releases Molecular Messages Through Extracellular Vesicles.
PMID:34988080
Identification of Antimicrobial Peptides Isolated From the Skin Mucus of African Catfish, Clarias gariepinus (Burchell, 1822).
PMID:34987491
The Human Proteoform Atlas: a FAIR community resource for experimentally derived proteoforms.
PMID:34986596
Clostridioides difficile Phosphoproteomics Shows an Expansion of Phosphorylated Proteins in Stationary Growth Phase.
PMID:34986318
Peroxide Antimalarial Drugs Target Redox Homeostasis in Plasmodium falciparum Infected Red Blood Cells.
PMID:34985858
Capillary Electrophoresis Coupled to Electrospray Ionization Tandem Mass Spectrometry for Ultra-Sensitive Proteomic Analysis of Limited Samples.
PMID:34983182
A proteomics informed by transcriptomics insight into the proteome of Ornithodoros erraticus adult tick saliva.
PMID:34980218
Characterization of Glycosylation-Specific Systemic and Mucosal IgA Antibody Responses to Escherichia coli Mucinase YghJ (SslE).
PMID:34975849
Temporal Analysis of Protein Ubiquitylation and Phosphorylation During Parkin-Dependent Mitophagy.
PMID:34974192
Sod1 integrates oxygen availability to redox regulate NADPH production and the thiol redoxome.
PMID:34969852
Extracellular Vesicles Induce an Aggressive Phenotype in Luminal Breast Cancer Cells Via PKM2 Phosphorylation.
PMID:34966685
Identification of HnRNPC as a novel Tau exon 10 splicing factor using RNA antisense purification mass spectrometry.
PMID:34965173
Compositional Analysis of Extracellular Aggregates in the Eyes of Patients With Exfoliation Syndrome and Exfoliation Glaucoma.
PMID:34964803
Proteomics and Interspecies Interaction Analysis Revealed Abscisic Acid Signalling to Be the Primary Driver for Oil Palm's Response against Red Palm Weevil Infestation.
PMID:34961045
Proteomic Analysis Reveals Low-Dose PARP Inhibitor-Induced Differential Protein Expression in BRCA1-Mutated High-Grade Serous Ovarian Cancer Cells.
PMID:34958553
Fast and global reorganization of the chloroplast protein biogenesis network during heat acclimation.
PMID:34958373
The Conformational State of the BTK Substrate PLCγ Contributes to Ibrutinib Resistance.
PMID:34954235
Installation of O-glycan sulfation capacities in human HEK293 cells for display of sulfated mucins.
PMID:34954141
Translocation of polyubiquitinated protein substrates by the hexameric Cdc48 ATPase.
PMID:34951965
Quantitative proteomics revealed new functions of ALKBH4.
PMID:34951099
A high-resolution mass spectrometry based proteomic dataset of human regulatory T cells.
PMID:34950757
Imiquimod Boosts Interferon Response, and Decreases ACE2 and Pro-Inflammatory Response of Human Bronchial Epithelium in Asthma.
PMID:34950134
SIRT5 Directly Inhibits the PI3K/AKT Pathway in Prostate Cancer Cell Lines.
PMID:34949659
Comparative Proteomic Analysis within the Developmental Stages of the Mushroom White Hypsizygus marmoreus.
PMID:34947046
Bap-Independent Biofilm Formation in Staphylococcus xylosus.
PMID:34946212
Plasma Proteome Signature to Predict the Outcome of Breast Cancer Patients Receiving Neoadjuvant Chemotherapy.
PMID:34944885
Inactivity of Peptidase ClpP Causes Primary Accumulation of Mitochondrial Disaggregase ClpX with Its Interacting Nucleoid Proteins, and of mtDNA.
PMID:34943861
Aging of Podospora anserina Leads to Alterations of OXPHOS and the Induction of Non-Mitochondrial Salvage Pathways.
PMID:34943827
Characterization of a MOB1 Homolog in the Apicomplexan Parasite Toxoplasma gondii.
PMID:34943148
A novel C-terminal DxRSDxE motif in ceramide synthases involved in dimer formation.
PMID:34942147
APC7 mediates ubiquitin signaling in constitutive heterochromatin in the developing mammalian brain.
PMID:34942119
UDP-glucose dehydrogenase expression is upregulated following EMT and differentially affects intracellular glycerophosphocholine and acetylaspartate levels in breast mesenchymal cell lines.
PMID:34942055
A longer isoform of Stim1 is a negative SOCE regulator but increases cAMP-modulated NFAT signaling.
PMID:34942054
Identification of α1,2-fucosylated signaling and adhesion molecules in head and neck squamous cell carcinoma.
PMID:34939118
N-acetyl-β-D-hexosaminidases mediate the generation of paucimannosidic proteins via a putative noncanonical truncation pathway in human neutrophils.
PMID:34939086
The butyrophilin 1a1 knockout mouse revisited: Ablation of Btn1a1 leads to concurrent cell death and renewal in the mammary epithelium during lactation.
PMID:34938960
Biosafety and Proteome Profiles of Different Heat Inactivation Methods for Mycobacterium tuberculosis.
PMID:34937194
Laser capture microdissection-capillary zone electrophoresis-tandem mass spectrometry (LCM-CZE-MS/MS) for spatially resolved top-down proteomics: a pilot study of zebrafish brain.
PMID:34935839
Metabolic reprogramming during hyperammonemia targets mitochondrial function and postmitotic senescence.
PMID:34935641
Spotted Fever Group Rickettsia Trigger Species-Specific Alterations in Macrophage Proteome Signatures with Different Impacts in Host Innate Inflammatory Responses.
PMID:34935429
A specific inhibitor of ALDH1A3 regulates retinoic acid biosynthesis in glioma stem cells.
PMID:34934174
A J Domain Protein Functions as a Histone Chaperone to Maintain Genome Integrity and the Response to DNA Damage in a Human Fungal Pathogen.
PMID:34933457
Structural architecture of the human NALCN channelosome.
PMID:34929720
Characterization of the AGR2 Interactome Uncovers New Players of Protein Disulfide Isomerase Network in Cancer Cells.
PMID:34929376
Identification of novel proteins and mechanistic pathways associated with early-onset hypertension by deep proteomic mapping of resistance arteries.
PMID:34929167
Type I CRISPR-Cas provides robust immunity but incomplete attenuation of phage-induced cellular stress.
PMID:34928385
Exploring the Mechanism of Action of Canmei Formula Against Colorectal Adenoma Through Multi-Omics Technique.
PMID:34926462
The HLA Ligandome Comprises a Limited Repertoire of O-GlcNAcylated Antigens Preferentially Associated With HLA-B*07:02.
PMID:34925382
Functionality of the human antibody response to Candida albicans.
PMID:34923920
Peroxiredoxin 6 protects irradiated cells from oxidative stress and shapes their senescence-associated cytokine landscape.
PMID:34923300
Topology of the redox network during induction of photosynthesis as revealed by time-resolved proteomics in tobacco.
PMID:34919428
Skyline Batch: An Intuitive User Interface for Batch Processing with Skyline.
PMID:34919405
Assessing interference in isobaric tag-based sample multiplexing using an 18-plex interference standard.
PMID:34918453
TREM2 interacts with TDP-43 and mediates microglial neuroprotection against TDP-43-related neurodegeneration.
PMID:34916658
PA28γ-20S proteasome is a proteolytic complex committed to degrade unfolded proteins.
PMID:34913092
Anterior gradient protein 2 is a marker of tumor aggressiveness in breast cancer and favors chemotherapy‑induced senescence escape.
PMID:34913074
RNAmetasome network for macromolecule biogenesis in human cells.
PMID:34912035
Critical Assessment of MetaProteome Investigation (CAMPI): a multi-laboratory comparison of established workflows.
PMID:34911965
Chronic treatment with terbutaline increases glucose and oleic acid oxidation and protein synthesis in cultured human myotubes.
PMID:34909668
Cognitive profiling and proteomic analysis of the modafinil analogue S-CE-123 in experienced aged rats.
PMID:34907284
Convergent use of phosphatidic acid for hepatitis C virus and SARS-CoV-2 replication organelle formation.
PMID:34907161
Mutation in protein disulfide isomerase A3 causes neurodevelopmental defects by disturbing endoplasmic reticulum proteostasis.
PMID:34904718
Dynamic 23S rRNA modification ho5C2501 benefits Escherichia coli under oxidative stress.
PMID:34904663
Generation of ENSEMBL-based proteogenomics databases boosts the identification of non-canonical peptides.
PMID:34904638
Metabolic Reprogramming and Reconstruction: Integration of Experimental and Computational Studies to Set the Path Forward in ADPKD.
PMID:34901057
α4/α9 Integrins Coordinate Epithelial Cell Migration Through Local Suppression of MAP Kinase Signaling Pathways.
PMID:34900996
Agrobacterium tumefaciens Type IV and Type VI Secretion Systems Reside in Detergent-Resistant Membranes.
PMID:34899640
Genotypic, proteomic, and phenotypic approaches to decipher the response to caspofungin and calcineurin inhibitors in clinical isolates of echinocandin-resistant Candida glabrata.
PMID:34893830
Acute RyR1 Ca2+ leak enhances NADH-linked mitochondrial respiratory capacity.
PMID:34893614
The short isoform of the host antiviral protein ZAP acts as an inhibitor of SARS-CoV-2 programmed ribosomal frameshifting.
PMID:34893599
Differential Effects of Insulin-Deficient Diabetes Mellitus on Visceral vs. Subcutaneous Adipose Tissue-Multi-omics Insights From the Munich MIDY Pig Model.
PMID:34888323
The proteome, not the transcriptome, predicts that oocyte superovulation affects embryonic phenotypes in mice.
PMID:34887460
Changes in the Proteome in the Development of Chronic Human Papillomavirus Infection-A Prospective Study in HIV Positive and HIV Negative Rwandan Women.
PMID:34885095
Palm Oil-Rich Diet Affects Murine Liver Proteome and S-Palmitoylome.
PMID:34884899
The Secretome of Human Neonatal Mesenchymal Stem Cells Modulates Doxorubicin-Induced Cytotoxicity: Impact in Non-Tumor Cells.
PMID:34884877
Fetal Immunomodulatory Environment Following Cartilage Injury-The Key to CARTILAGE Regeneration?
PMID:34884768
Proteomic Changes of Activated Hepatic Stellate Cells.
PMID:34884585
Anti-SARS-CoV-2 antibodies elicited by COVID-19 mRNA vaccine exhibit a unique glycosylation pattern.
PMID:34883043
The Hydrogen-Coupled Oligopeptide Membrane Cotransporter Pept2 is SUMOylated in Kidney Distal Convoluted Tubule Cells.
PMID:34881291
Serpinc1 Acts as a Tumor Suppressor in Hepatocellular Carcinoma Through Inducing Apoptosis and Blocking Macrophage Polarization in an Ubiquitin-Proteasome Manner.
PMID:34881176
Exercise plasma boosts memory and dampens brain inflammation via clusterin.
PMID:34880498
A proteomics study identifying interactors of the FSHD2 gene product SMCHD1 reveals RUVBL1-dependent DUX4 repression.
PMID:34880314
GPR180 is a component of TGFβ signalling that promotes thermogenic adipocyte function and mediates the metabolic effects of the adipocyte-secreted factor CTHRC1.
PMID:34880217
Bolstering fitness via CO2 fixation and organic carbon uptake: mixotrophs in modern groundwater.
PMID:34876683
Plasmin activity promotes amyloid deposition in a transgenic model of human transthyretin amyloidosis.
PMID:34876572
Combined Quantitative (Phospho)proteomics and Mass Spectrometry Imaging Reveal Temporal and Spatial Protein Changes in Human Intestinal Ischemia-Reperfusion.
PMID:34874173
Maternal serum-derived exosomal lactoferrin as a marker in detecting and predicting ventricular septal defect in fetuses.
PMID:34871505
iProX in 2021: connecting proteomics data sharing with big data.
PMID:34871441
Development of Methodology to Investigate the Surface SMALPome of Mammalian Cells.
PMID:34869600
Epstein-Barr Virus+ B Cells in Breast Cancer Immune Response: A Case Report.
PMID:34868006
Simple, Single-Shot Phosphoproteomic Analysis of Heat-Stable Tau Identifies Age-Related Changes in pS235- and pS396-Tau Levels in Non-human Primates.
PMID:34867294
Microdissected Pyramidal Cell Proteomics of Alzheimer Brain Reveals Alterations in Creatine Kinase B-Type, 14-3-3-γ, and Heat Shock Cognate 71.
PMID:34867272
Multi-modal Profiling of the Extracellular Matrix of Human Fallopian Tubes and Serous Tubal Intraepithelial Carcinomas.
PMID:34866441
ProMetIS, deep phenotyping of mouse models by combined proteomics and metabolomics analysis.
PMID:34862403
A validated analysis pipeline for mass spectrometry-based vitreous proteomics: new insights into proliferative diabetic retinopathy.
PMID:34861815
FOXN1 forms higher-order nuclear condensates displaced by mutations causing immunodeficiency.
PMID:34860543
Automated High-Throughput Method for the Fast, Robust, and Reproducible Enrichment of Newly Synthesized Proteins.
PMID:34860524
Thermal Proteome Profiling to Identify Protein-ligand Interactions in the Apicomplexan Parasite Toxoplasma gondii.
PMID:34859122
Targeted Mass Spectrometry Enables Multiplexed Quantification of Immunomodulatory Proteins in Clinical Biospecimens.
PMID:34858420
Citrullinated Epitopes Identified on Tumour MHC Class II by Peptide Elution Stimulate Both Regulatory and Th1 Responses and Require Careful Selection for Optimal Anti-Tumour Responses.
PMID:34858415
GFI1 tethers the NuRD complex to open and transcriptionally active chromatin in myeloid progenitors.
PMID:34857890
Light-mediated discovery of surfaceome nanoscale organization and intercellular receptor interaction networks.
PMID:34857745
Molecular architecture of the human tRNA ligase complex.
PMID:34854379
A distinct complex of PRP19-related and trypanosomatid-specific proteins is required for pre-mRNA splicing in trypanosomes.
PMID:34850936
Expression Atlas update: gene and protein expression in multiple species.
PMID:34850121
Proteomic profiling of human amnion for preterm birth biomarker discovery.
PMID:34848816
Identification of cerebrospinal fluid biomarkers for parkinsonism using a proteomics approach.
PMID:34848724
Global mitochondrial protein import proteomics reveal distinct regulation by translation and translocation machinery.
PMID:34847359
Determinants of high-density lipoprotein (HDL) functions beyond proteome in Asian Indians: exploring the fatty acid profile of HDL phospholipids.
PMID:34843015
tRNA Synthetases Are Recruited to Yeast Ribosomes by rRNA Expansion Segment 7L but Do Not Require Association for Functionality.
PMID:34842814
CRYPTOCHROMES promote daily protein homeostasis.
PMID:34842284
Biogenesis of hepatitis B virus e antigen is driven by translocon-associated protein complex and regulated by conserved cysteine residues within its signal peptide sequence.
PMID:34839586
Targeting conserved N-glycosylation blocks SARS-CoV-2 variant infection in vitro.
PMID:34839261
BAF complexes drive proliferation and block myogenic differentiation in fusion-positive rhabdomyosarcoma.
PMID:34836971
A genetically-encoded crosslinker screen identifies SERBP1 as a PKCε substrate influencing translation and cell division.
PMID:34836941
Milk Formula Diet Alters Bacterial and Host Protein Profile in Comparison to Human Milk Diet in Neonatal Piglet Model.
PMID:34835974
An Isoform of the Eukaryotic Translation Elongation Factor 1A (eEF1a) Acts as a Pro-Viral Factor Required for Tomato Spotted Wilt Virus Disease in Nicotiana benthamiana.
PMID:34834996
Characterization of Biomarkers in Colorectal Cancer Liver Metastases as a Prognostic Tool.
PMID:34834411
AC016745.3 Regulates the Transcription of AR Target Genes by Antagonizing NONO.
PMID:34833084
Hypoxic Incubation Conditions for Optimized Manufacture of Tenocyte-Based Active Pharmaceutical Ingredients of Homologous Standardized Transplant Products in Tendon Regenerative Medicine.
PMID:34831095
PGRMC1 Promotes Progestin-Dependent Proliferation of Breast Cancer Cells by Binding Prohibitins Resulting in Activation of ERα Signaling.
PMID:34830790
Quantitative Analysis of the Cardiac Phosphoproteome in Response to Acute β-Adrenergic Receptor Stimulation In Vivo.
PMID:34830474
Membrane Vesicles of Pectobacterium as an Effective Protein Secretion System.
PMID:34830459
Proteomic Analysis of Marinesco-Sjogren Syndrome Fibroblasts Indicates Pro-Survival Metabolic Adaptation to SIL1 Loss.
PMID:34830330
Phosphoproteomic Comparison of Four Eimeria tenella Life Cycle Stages.
PMID:34829991
Comparative Analysis of Dental Pulp and Periodontal Stem Cells: Differences in Morphology, Functionality, Osteogenic Differentiation and Proteome.
PMID:34829835
Extracellular Vesicles from Fusarium graminearum Contain Protein Effectors Expressed during Infection of Corn.
PMID:34829264
Comprehensive Atlas of the Myelin Basic Protein Interaction Landscape.
PMID:34827627
Plasma proteomic data in bipolar II disorders and major depressive disorders.
PMID:34825021
NUDT2 initiates viral RNA degradation by removal of 5'-phosphates.
PMID:34824277
Proteomic analysis identified potential age-associated prognostic biomarkers in pneumonia-derived paediatric sepsis.
PMID:34822739
Deciphering the major metabolic pathways associated with aluminum tolerance in popcorn roots using label-free quantitative proteomics.
PMID:34821986
Highly flexible metabolism of the marine euglenozoan protist Diplonema papillatum.
PMID:34819072
d-Alanine Metabolism via d-Ala Aminotransferase by a Marine Gammaproteobacterium, Pseudoalteromonas sp. Strain CF6-2.
PMID:34818098
Nucleoside-Modified mRNA Vaccines Protect IFNAR-/- Mice against Crimean-Congo Hemorrhagic Fever Virus Infection.
PMID:34817199
Capacitive interdigitated system of high osteoinductive/conductive performance for personalized acting-sensing implants.
PMID:34815414
Fluvastatin mitigates SARS-CoV-2 infection in human lung cells.
PMID:34812415
Chromatin enrichment for proteomics in plants (ChEP-P) implicates the histone reader ALFIN-LIKE 6 in jasmonate signalling.
PMID:34809577
A Carvacrol-Rich Essential Oil Extracted From Oregano (Origanum vulgare "Hot & Spicy") Exerts Potent Antibacterial Effects Against Staphylococcus aureus.
PMID:34803958
Quantitative high-confidence human mitochondrial proteome and its dynamics in cellular context.
PMID:34800366
Large scale discovery of coronavirus-host factor protein interaction motifs reveals SARS-CoV-2 specific mechanisms and vulnerabilities.
PMID:34799561
Multilayered regulation of autophagy by the Atg1 kinase orchestrates spatial and temporal control of autophagosome formation.
PMID:34798055
A scalable, clinically severe pig model for Duchenne muscular dystrophy.
PMID:34796900
Enhanced epigenetic profiling of classical human monocytes reveals a specific signature of healthy aging in the DNA methylome.
PMID:34796338
Acyl carrier protein promotes MukBEF action in Escherichia coli chromosome organization-segregation.
PMID:34795302
Phosphorylation activates the yeast small heat shock protein Hsp26 by weakening domain contacts in the oligomer ensemble.
PMID:34795272
G3BP1 inhibits Cul3SPOP to amplify AR signaling and promote prostate cancer.
PMID:34795264
HPF1 dynamically controls the PARP1/2 balance between initiating and elongating ADP-ribose modifications.
PMID:34795260
Mapping protein carboxymethylation sites provides insights into their role in proteostasis and cell proliferation.
PMID:34795246
Smooth muscle-specific MMP17 (MT4-MMP) regulates the intestinal stem cell niche and regeneration after damage.
PMID:34795242
Proteogenomic discovery of neoantigens facilitates personalized multi-antigen targeted T cell immunotherapy for brain tumors.
PMID:34795224
Combined proteomic/transcriptomic signature of recurrence post-liver transplantation for hepatocellular carcinoma beyond Milan.
PMID:34794390
Cryo-EM structure of human GPR158 receptor coupled to the RGS7-Gβ5 signaling complex.
PMID:34793198
ProteomicsDB: toward a FAIR open-source resource for life-science research.
PMID:34791421
Inhibition of bone morphogenetic proteins signaling suppresses metastasis melanoma: a proteomics approach.
PMID:34786044
Co-activation of Sonic hedgehog and Wnt signaling in murine retinal precursor cells drives ocular lesions with features of intraocular medulloepithelioma.
PMID:34785636
Staphylococcal ClpXP protease targets the cellular antioxidant system to eliminate fitness-compromised cells in stationary phase.
PMID:34782466
SARS-CoV-2 nucleocapsid protein interacts with immunoregulators and stress granules and phase separates to form liquid droplets.
PMID:34780058
Metabolic resistance to the inhibition of mitochondrial transcription revealed by CRISPR-Cas9 screen.
PMID:34779571
Plasma Gradient of Soluble Urokinase-Type Plasminogen Activator Receptor Is Linked to Pathogenic Plasma Proteome and Immune Transcriptome and Stratifies Outcomes in Severe COVID-19.
PMID:34777349
The Effect of Allicin on the Proteome of SARS-CoV-2 Infected Calu-3 Cells.
PMID:34777295
Proximity-dependent biotinylation detects associations between SARS coronavirus nonstructural protein 1 and stress granule-associated proteins.
PMID:34774526
Zinc finger protein ZNF384 is an adaptor of Ku to DNA during classical non-homologous end-joining.
PMID:34772923
Individualized Proteogenomics Reveals the Mutational Landscape of Melanoma Patients in Response to Immunotherapy.
PMID:34771574
Cancer Tissue Classification Using Supervised Machine Learning Applied to MALDI Mass Spectrometry Imaging.
PMID:34771551
Trial Proteomic Qualitative and Quantitative Analysis of the Protein Matrix of Submandibular Sialoliths.
PMID:34771131
Novel Translational and Phosphorylation Modification Regulation Mechanisms of Tomato (Solanum lycopersicum) Fruit Ripening Revealed by Integrative Proteomics and Phosphoproteomics.
PMID:34769214
Direct and Indirect Effect of TGFβ on Treg Transendothelial Recruitment in HCC Tissue Microenvironment.
PMID:34769191
Protein Palmitoylation in Bovine Ovarian Follicle.
PMID:34769186
Multi-Omics Approach to Elucidate Cerebrospinal Fluid Changes in Dogs with Intervertebral Disc Herniation.
PMID:34769107
A Multi-Perspective Proximity View on the Dynamic Head Region of the Ribosomal 40S Subunit.
PMID:34769086
Potential Muscle-Related Biomarkers in Predicting Curve Progression to the Surgical Threshold in Adolescent Idiopathic Scoliosis-A Pilot Proteomic Study Comparing Four Non-Progressive vs. Four Progressive Patients vs. A Control Cohort.
PMID:34768447
Prochlorococcus extracellular vesicles: molecular composition and adsorption to diverse microbes.
PMID:34766712
Comprehensive quantitative characterization of the human term amnion proteome.
PMID:34765964
Venom proteomic analysis of medically important Nigerian viper Echis ocellatus and Bitis arietans snake species.
PMID:34765747
Proteome dataset of liver from dairy cows experiencing negative or positive energy balance at early lactation.
PMID:34765708
Elucidation of the Translation Initiation Factor Interaction Network of Haloferax volcanii Reveals Coupling of Transcription and Translation in Haloarchaea.
PMID:34764944
An integrated workflow for enhanced taxonomic and functional coverage of the mouse fecal metaproteome.
PMID:34763597
Proteomic Analysis of Trichomonas vaginalis Phagolysosome, Lysosomal Targeting, and Unconventional Secretion of Cysteine Peptidases.
PMID:34763061
Nano-structured myelin: new nanovesicles for targeted delivery to white matter and microglia, from brain-to-brain.
PMID:34761196
Venomics of the Enigmatic Andaman Cobra (Naja sagittifera) and the Preclinical Failure of Indian Antivenoms in Andaman and Nicobar Islands.
PMID:34759827
Purification of an insect juvenile hormone receptor complex enables insights into its post-translational phosphorylation.
PMID:34758356
Genomic expansion of Aldh1a1 protects beavers against high metabolic aldehydes from lipid oxidation.
PMID:34758328
The hepatic compensatory response to elevated systemic sulfide promotes diabetes.
PMID:34758301
The proteome of developing barley anthers during meiotic prophase I.
PMID:34758083
Japanese Encephalitis Virus NS1' Protein Interacts with Host CDK1 Protein to Regulate Antiviral Response.
PMID:34756071
Characterising a homozygous two-exon deletion in UQCRH: comparing human and mouse phenotypes.
PMID:34750991
Identification and characterization of a noncanonical menaquinone-linked formate dehydrogenase.
PMID:34748728
The human telomeric proteome during telomere replication.
PMID:34747482
Proteome characterization of the culture supernatant of Mycobacterium bovis in different growth stages.
PMID:34746449
The Subcellular Proteome of a Planctomycetes Bacterium Shows That Newly Evolved Proteins Have Distinct Fractionation Patterns.
PMID:34745019
Identification of Desmoglein-2 as a novel target of Helicobacter pylori HtrA in epithelial cells.
PMID:34742300
Hybridization-proximity labeling reveals spatially ordered interactions of nuclear RNA compartments.
PMID:34741808
Quantitative Ubiquitylome Analysis Reveals the Specificity of RNF111/Arkadia E3 Ubiquitin Ligase for its Degradative Substrates SKI and SKIL/SnoN in TGF-β Signaling Pathway.
PMID:34740826
β-synuclein potentiates synaptic vesicle dopamine uptake and rescues dopaminergic neurons from MPTP-induced death in the absence of other synucleins.
PMID:34736896
Impacts of Ser/Thr Protein Kinase Stk1 on the Proteome, Twitching Motility, and Competitive Advantage in Pseudomonas aeruginosa.
PMID:34733256
B cell-derived GABA elicits IL-10+ macrophages to limit anti-tumour immunity.
PMID:34732892
Cross-HLA targeting of intracellular oncoproteins with peptide-centric CARs.
PMID:34732890
Extracellular LGALS3BP regulates neural progenitor position and relates to human cortical complexity.
PMID:34728600
Regulating Expression of Mistranslating tRNAs by Readthrough RNA Polymerase II Transcription.
PMID:34726901
The nucleoporin Nup50 activates the Ran guanine nucleotide exchange factor RCC1 to promote NPC assembly at the end of mitosis.
PMID:34725842
Community evaluation of glycoproteomics informatics solutions reveals high-performance search strategies for serum glycopeptide analysis.
PMID:34725484
Transcriptomic and proteomic analysis of pyrethroid resistance in the CKR strain of Aedes aegypti.
PMID:34723971
The PRIDE database resources in 2022: a hub for mass spectrometry-based proteomics evidences.
PMID:34723319
Studies on Novel Diagnostic and Predictive Biomarkers of Intrahepatic Cholestasis of Pregnancy Through Metabolomics and Proteomics.
PMID:34721396
Formation and persistence of polyglutamine aggregates in mistranslating cells.
PMID:34718744
Quantitative phosphoproteomic analysis reveals chemoresistance-related proteins and signaling pathways induced by rhIL-6 in human osteosarcoma cells.
PMID:34717622
Coordination of fungal biofilm development by extracellular vesicle cargo.
PMID:34716343
Inner nuclear protein Matrin-3 coordinates cell differentiation by stabilizing chromatin architecture.
PMID:34716321
Identification of long-lived proteins in the mitochondria reveals increased stability of the electron transport chain.
PMID:34715012
Single Nucleotide Resolution RNA-Protein Cross-Linking Mass Spectrometry: A Simple Extension of the CLIR-MS Workflow.
PMID:34714631
Thioredoxin-mediated alteration of protein content and cytotoxicity of Acinetobacter baumannii outer membrane vesicles.
PMID:34713732
Topological Dissection of Proteomic Changes Linked to the Limbic Stage of Alzheimer's Disease.
PMID:34712240
The legumain McPAL1 from Momordica cochinchinensis is a highly stable Asx-specific splicing enzyme.
PMID:34710371
Molecular characterization of hematopoietic stem cells after in vitro amplification on biomimetic 3D PDMS cell culture scaffolds.
PMID:34707135
Proteomic and lipidomic profiling of demyelinating lesions identifies fatty acids as modulators in lesion recovery.
PMID:34706241
Tandem Mass Tag-Based Quantitative Proteomics and Virulence Phenotype of Hemolymph-Treated Bacillus thuringiensis kurstaki Cells Reveal New Insights on Bacterial Pathogenesis in Insects.
PMID:34704785
RNF43 inhibits WNT5A-driven signaling and suppresses melanoma invasion and resistance to the targeted therapy.
PMID:34702444
Identification and drug-induced reversion of molecular signatures of Alzheimer's disease onset and progression in AppNL-G-F, AppNL-F, and 3xTg-AD mouse models.
PMID:34702310
Oligomerization-driven MLKL ubiquitylation antagonizes necroptosis.
PMID:34698396
A Potential Role of the CD47/SIRPalpha Axis in COVID-19 Pathogenesis.
PMID:34698067
PIM1 phosphorylation of the androgen receptor and 14-3-3 ζ regulates gene transcription in prostate cancer.
PMID:34697370
Antibiotic-chemoattractants enhance neutrophil clearance of Staphylococcus aureus.
PMID:34697316
Exercise prevents fatty liver by modifying the compensatory response of mitochondrial metabolism to excess substrate availability.
PMID:34695608
PLCG1 is required for AML1-ETO leukemia stem cell self-renewal.
PMID:34695195
RabA2b Overexpression Alters the Plasma-Membrane Proteome and Improves Drought Tolerance in Arabidopsis.
PMID:34691115
Allotypic variation in antigen processing controls antigenic peptide generation from SARS-CoV-2 S1 spike glycoprotein.
PMID:34688668
The MttB superfamily member MtyB from the human gut symbiont Eubacterium limosum is a cobalamin-dependent γ-butyrobetaine methyltransferase.
PMID:34688665
Flexible open conformation of the AP-3 complex explains its role in cargo recruitment at the Golgi.
PMID:34688652
The SZT2 Interactome Unravels New Functions of the KICSTOR Complex.
PMID:34685691
A Human 3D Cardiomyocyte Risk Model to Study the Cardiotoxic Influence of X-rays and Other Noxae in Adults.
PMID:34685588
Iron Oxide Nanoparticles Carrying 5-Fluorouracil in Combination with Magnetic Hyperthermia Induce Thrombogenic Collagen Fibers, Cellular Stress, and Immune Responses in Heterotopic Human Colon Cancer in Mice.
PMID:34683917
Mass Spectrometry-Based Proteomics Reveal Alcohol Dehydrogenase 1B as a Blood Biomarker Candidate to Monitor Acetaminophen-Induced Liver Injury.
PMID:34681731
Proteomic Landscape of Extracellular Vesicles for Diffuse Large B-Cell Lymphoma Subtyping.
PMID:34681663
p53 Forms Redox-Dependent Protein-Protein Interactions through Cysteine 277.
PMID:34679713
Progesterone receptor membrane component 1 (PGRMC1) binds and stabilizes cytochromes P450 through a heme-independent mechanism.
PMID:34678314
A Conservative Point Mutation in a Dynamic Antigen-binding Loop of Human Immunoglobulin λ6 Light Chain Promotes Pathologic Amyloid Formation.
PMID:34678302
Proteomic and Biological Analysis of the Effects of Metformin Senomorphics on the Mesenchymal Stromal Cells.
PMID:34676202
GM-CSF Nitration Is a New Driver of Myeloid Suppressor Cell Activity in Tumors.
PMID:34675917
Proteomic profile of mesothelial exosomes isolated from peritoneal dialysis effluent of children with focal segmental glomerulosclerosis.
PMID:34675284
Light-triggered and phosphorylation-dependent 14-3-3 association with NON-PHOTOTROPIC HYPOCOTYL 3 is required for hypocotyl phototropism.
PMID:34675219
Neuronal ribosomes exhibit dynamic and context-dependent exchange of ribosomal proteins.
PMID:34675203
Identification of SUMO Targets Associated With the Pluripotent State in Human Stem Cells.
PMID:34673284
Proteogenomics Reveals Perturbed Signaling Networks in Malignant Melanoma Cells Resistant to BRAF Inhibition.
PMID:34673281
Mechanistic insights into COVID-19 by global analysis of the SARS-CoV-2 3CLpro substrate degradome.
PMID:34672947
The Major Peanut Allergen Ara h 2 Produced in Nicotiana benthamiana Contains Hydroxyprolines and Is a Viable Alternative to the E. Coli Product in Allergy Diagnosis.
PMID:34671372
Identification of Differential Responses of Goat PBMCs to PPRV Virulence Using a Multi-Omics Approach.
PMID:34671358
Proteomic Signatures of Human Visceral and Subcutaneous Adipocytes.
PMID:34669916
Streptomyces coelicolor Vesicles: Many Molecules To Be Delivered.
PMID:34669446
The proteomic architecture of schizophrenia iPSC-derived cerebral organoids reveals alterations in GWAS and neuronal development factors.
PMID:34667143
Palmitoylation targets the calcineurin phosphatase to the phosphatidylinositol 4-kinase complex at the plasma membrane.
PMID:34663815
Proteomic analysis of dietary restriction in yeast reveals a role for Hsp26 in replicative lifespan extension.
PMID:34661239
Novel Corneal Protein Biomarker Candidates Reveal Iron Metabolic Disturbance in High Myopia Eyes.
PMID:34660571
Shotgun Immunoproteomic Approach for the Discovery of Linear B-Cell Epitopes in Biothreat Agents Francisella tularensis and Burkholderia pseudomallei.
PMID:34659206
Music of metagenomics-a review of its applications, analysis pipeline, and associated tools.
PMID:34657989
A novel phosphoproteomic landscape evoked in response to type I interferon in the brain and in glial cells.
PMID:34656141
A Systematic Survey of the Light/Dark-dependent Protein Degradation Events in a Model Cyanobacterium.
PMID:34655801
Extracellular vesicle proteomes of two transmissible cancers of Tasmanian devils reveal tenascin-C as a serum-based differential diagnostic biomarker.
PMID:34655299
Photoactivatable ribonucleosides mark base-specific RNA-binding sites.
PMID:34654832
Sub-centrosomal mapping identifies augmin-γTuRC as part of a centriole-stabilizing scaffold.
PMID:34654813
Heading towards a dead end: The role of DND1 in germ line differentiation of human iPSCs.
PMID:34653201
Deep representation features from DreamDIAXMBD improve the analysis of data-independent acquisition proteomics.
PMID:34650228
Hallstatt miners consumed blue cheese and beer during the Iron Age and retained a non-Westernized gut microbiome until the Baroque period.
PMID:34648730
The human GID complex engages two independent modules for substrate recruitment.
PMID:34647674
Arabidopsis thaliana myosin XIK is recruited to the Golgi through interaction with a MyoB receptor.
PMID:34645991
A bacterial membrane sculpting protein with BAR domain-like activity.
PMID:34643180
Structural and functional consequences of NEDD8 phosphorylation.
PMID:34642328
Myofilament Phosphorylation in Stem Cell Treated Diastolic Heart Failure.
PMID:34641704
Modulation of the NOTCH1 Pathway by LUNATIC FRINGE Is Dominant over That of MANIC or RADICAL FRINGE.
PMID:34641486
Proteomic Characterization of the Cellular Effects of AhR Activation by Microbial Tryptophan Catabolites in Endotoxin-Activated Human Macrophages.
PMID:34639632
C9ORF72 Repeat Expansion Affects the Proteome of Primary Skin Fibroblasts in ALS.
PMID:34638725
Arabidopsis LSH8 Positively Regulates ABA Signaling by Changing the Expression Pattern of ABA-Responsive Proteins.
PMID:34638657
Mass Spectrometric and Bio-Computational Binding Strength Analysis of Multiply Charged RNAse S Gas-Phase Complexes Obtained by Electrospray Ionization from Varying In-Solution Equilibrium Conditions.
PMID:34638522
Palmdelphin Regulates Nuclear Resilience to Mechanical Stress in the Endothelium.
PMID:34636652
FGF-2 induces a failure of cell cycle progression in cells harboring amplified K-Ras, revealing new insights into oncogene-induced senescence.
PMID:34636387
Clipper: p-value-free FDR control on high-throughput data from two conditions.
PMID:34635147
The comprehensive interactomes of human adenosine RNA methyltransferases and demethylases reveal distinct functional and regulatory features.
PMID:34634806
Domain Organization of the UBX Domain Containing Protein 9 and Analysis of Its Interactions With the Homohexameric AAA + ATPase p97 (Valosin-Containing Protein).
PMID:34631722
Thrombospondin-4 Is a Soluble Dermal Inflammatory Signal That Selectively Promotes Fibroblast Migration and Keratinocyte Proliferation for Skin Regeneration and Wound Healing.
PMID:34631719
The regulatory landscape of the human HPF1- and ARH3-dependent ADP-ribosylome.
PMID:34625544
Metabolic responsiveness to training depends on insulin sensitivity and protein content of exosomes in insulin-resistant males.
PMID:34623918
A possible role of gas-phase electrophoretic mobility molecular analysis (nES GEMMA) in extracellular vesicle research.
PMID:34622320
Dataset of single nucleotide polymorphisms and comprehensive proteomic analysis of Streptococcus equi subsp. equi ATCC 39506.
PMID:34621931
Strategies for Rapid Identification of Acinetobacter baumannii Membrane Proteins and Polymyxin B's Effects.
PMID:34621692
Virulence of Vibrio alginolyticus Accentuates Apoptosis and Immune Rigor in the Oyster Crassostrea hongkongensis.
PMID:34621277
Structure and inhibition of Cryptococcus neoformans sterylglucosidase to develop antifungal agents.
PMID:34620873
Mitochondrial Impairment by MitoBloCK-6 Inhibits Liver Cancer Cell Proliferation.
PMID:34616733
SARS-CoV-2 Coronavirus Spike Protein-Induced Apoptosis, Inflammatory, and Oxidative Stress Responses in THP-1-Like-Macrophages: Potential Role of Angiotensin-Converting Enzyme Inhibitor (Perindopril).
PMID:34616396
Early and Late Processes Driving NET Formation, and the Autocrine/Paracrine Role of Endogenous RAGE Ligands.
PMID:34616390
Reversible amyloids of pyruvate kinase couple cell metabolism and stress granule disassembly.
PMID:34616026
Cargo-specific recruitment in clathrin- and dynamin-independent endocytosis.
PMID:34616024
A proteomics sample metadata representation for multiomics integration and big data analysis.
PMID:34615866
L-bodies are RNA-protein condensates driving RNA localization in Xenopus oocytes.
PMID:34613784
Influenza A H1N1 Induced Disturbance of the Respiratory and Fecal Microbiome of German Landrace Pigs - a Multi-Omics Characterization.
PMID:34612695
Temperature Influences the Composition and Cytotoxicity of Extracellular Vesicles in Staphylococcus aureus.
PMID:34612674
A dual-function RNA balances carbon uptake and central metabolism in Vibrio cholerae.
PMID:34612526
C. elegans feed yolk to their young in a form of primitive lactation.
PMID:34611154
Purification of MAP-kinase protein complexes and identification of candidate components by XL-TAP-MS.
PMID:34609515
A bioorthogonal chemical reporter for fatty acid synthase-dependent protein acylation.
PMID:34606827
Combined Molecular and Elemental Mass Spectrometry Approaches for Absolute Quantification of Proteomes: Application to the Venomics Characterization of the Two Species of Desert Black Cobras, Walterinnesia aegyptia and Walterinnesia morgani.
PMID:34606723
CDKL5 kinase controls transcription-coupled responses to DNA damage.
PMID:34605059
Phosphoproteomics Provides Novel Insights into the Response of Primary Acute Lymphoblastic Leukemia Cells to Microtubule Depolymerization in G1 Phase of the Cell Cycle.
PMID:34604676
Interactome Networks of FOSL1 and FOSL2 in Human Th17 Cells.
PMID:34604665
Roles and Cellular Localization of GBP2 and NAB2 During the Blood Stage of Malaria Parasites.
PMID:34604117
Time-gated Raman spectroscopy and proteomics analyses of hypoxic and normoxic renal carcinoma extracellular vesicles.
PMID:34599227
Spatiotemporal proteomic profiling of the pro-inflammatory response to lipopolysaccharide in the THP-1 human leukaemia cell line.
PMID:34599159
Deep-coverage spatiotemporal proteome of the picoeukaryote Ostreococcus tauri reveals differential effects of environmental and endogenous 24-hour rhythms.
PMID:34593975
A Novel Spectral Annotation Strategy Streamlines Reporting of Mono-ADP-ribosylated Peptides Derived from Mouse Liver and Spleen in Response to IFN-γ.
PMID:34592425
Structural mapping techniques distinguish the surfaces of fibrillar 1N3R and 1N4R human tau.
PMID:34592311
A protein network map of head and neck cancer reveals PIK3CA mutant drug sensitivity.
PMID:34591642
Effects of Combinatorial Ubiquitinated Protein-Based Nanovaccine and STING Agonist in Mice With Drug-Resistant and Metastatic Breast Cancer.
PMID:34589084
Protein Aggregation Is an Early Manifestation of Phospholamban p.(Arg14del)-Related Cardiomyopathy: Development of PLN-R14del-Related Cardiomyopathy.
PMID:34587756
In Vivo Structure-Function Analysis and Redox Interactomes of Leishmania tarentolae Erv.
PMID:34585988
Quantitative proteomics reveals the selectivity of ubiquitin-binding autophagy receptors in the turnover of damaged lysosomes by lysophagy.
PMID:34585663
Phagocytosis by stroma confounds coculture studies.
PMID:34585113
Integrated Stress Response Couples Mitochondrial Protein Translation With Oxidative Stress Control.
PMID:34583519
Integrative proteome analysis implicates aberrant RNA splicing in impaired developmental potential of aged mouse oocytes.
PMID:34582091
Age-dependent changes in protein incorporation into collagen-rich tissues of mice by in vivo pulsed SILAC labelling.
PMID:34581667
Pathway of Hsp70 interactions at the ribosome.
PMID:34580293
Approaching In Vivo Models of Pneumococcus-Host Interaction: Insights into Surface Proteins, Capsule Production, and Extracellular Vesicles.
PMID:34578131
Synergistic Interactions of Cannabidiol with Chemotherapeutic Drugs in MCF7 Cells: Mode of Interaction and Proteomics Analysis of Mechanisms.
PMID:34576262
Early Embryo Exposure to Assisted Reproductive Manipulation Induced Subtle Changes in Liver Epigenetics with No Apparent Negative Health Consequences in Rabbit.
PMID:34575877
Analysis of the Putative Nucleoporin POM33 in the Filamentous Fungus Sordaria macrospora.
PMID:34575720
Differential Expression of Estrogen-Responsive Genes in Women with Psoriasis.
PMID:34575702
Partial-, Double-Enzymatic Dephosphorylation and EndoGluC Hydrolysis as an Original Approach to Enhancing Identification of Casein Phosphopeptides (CPPs) by Mass Spectrometry.
PMID:34574245
HMGB1 Protein Interactions in Prostate and Ovary Cancer Models Reveal Links to RNA Processing and Ribosome Biogenesis through NuRD, THOC and Septin Complexes.
PMID:34572914
The Emerging Plasticizer Alternative DINCH and Its Metabolite MINCH Induce Oxidative Stress and Enhance Inflammatory Responses in Human THP-1 Macrophages.
PMID:34572016
In Planta Transcriptome and Proteome Profiles of Spongospora subterranea in Resistant and Susceptible Host Environments Illuminates Regulatory Principles Underlying Host-Pathogen Interaction.
PMID:34571717
A vast pool of lineage-specific microproteins encoded by long non-coding RNAs in plants.
PMID:34570232
SPENCER: a comprehensive database for small peptides encoded by noncoding RNAs in cancer patients.
PMID:34570216
Circulating extracellular vesicles of patients with steroid-sensitive nephrotic syndrome have higher RAC1 and induce recapitulation of nephrotic syndrome phenotype in podocytes.
PMID:34569252
The amino acid substitution affects cellular response to mistranslation.
PMID:34568909
An Integrated Approach for the Efficient Extraction and Solubilization of Rice Microsomal Membrane Proteins for High-Throughput Proteomics.
PMID:34567038
Characterization by Quantitative Serum Proteomics of Immune-Related Prognostic Biomarkers for COVID-19 Symptomatology.
PMID:34566994
Extensive regulation of enzyme activity by phosphorylation in Escherichia coli.
PMID:34561442
Multistep mechanism of G-quadruplex resolution during DNA replication.
PMID:34559566
Systematic Analysis of the Impact of R-Methylation on RBPs-RNA Interactions: A Proteomic Approach.
PMID:34557518
Discovery and characterization of UipA, a uranium- and iron-binding PepSY protein involved in uranium tolerance by soil bacteria.
PMID:34556817
The Drosophila orthologue of the primary ciliary dyskinesia-associated gene, DNAAF3, is required for axonemal dynein assembly.
PMID:34553759
Expanding the family of extracellular chaperones: Identification of human plasma proteins with chaperone activity.
PMID:34553437
Synthetic VSMCs induce BBB disruption mediated by MYPT1 in ischemic stroke.
PMID:34553133
Pan-cancer proteogenomic investigations identify post-transcriptional kinase targets.
PMID:34552204
Polymorphic estrogen receptor binding site causes Cd2-dependent sex bias in the susceptibility to autoimmune diseases.
PMID:34552089
Three Distinct Proteases Are Responsible for Overall Cell Surface Proteolysis in Streptococcus thermophilus.
PMID:34550764
Up-Regulated Salivary Proteins of Brown Marmorated Stink Bug Halyomorpha halys on Plant Growth-Promoting Rhizobacteria-Treated Plants.
PMID:34550513
The Human Innate Immune Protein Calprotectin Elicits a Multimetal Starvation Response in Pseudomonas aeruginosa.
PMID:34549997
Subcellular proteomics.
PMID:34549195
Prenylcysteine oxidase 1, an emerging player in atherosclerosis.
PMID:34548610
SWATH-MS for prospective identification of protein blood biomarkers of rtPA-associated intracranial hemorrhage in acute ischemic stroke: a pilot study.
PMID:34548538
Characterising proteolysis during SARS-CoV-2 infection identifies viral cleavage sites and cellular targets with therapeutic potential.
PMID:34548480
Conformational Changes of RORγ During Response Element Recognition and Coregulator Engagement.
PMID:34547329
Impaired mRNA splicing and proteostasis in preadipocytes in obesity-related metabolic disease.
PMID:34545810
Multi-level inhibition of coronavirus replication by chemical ER stress.
PMID:34545074
AlphaTims: Indexing Trapped Ion Mobility Spectrometry-TOF Data for Fast and Easy Accession and Visualization.
PMID:34543758
Proteomic Analysis of Cardiac Adaptation to Exercise by High Resolution Mass Spectrometry.
PMID:34540898
Marine dissolved organic matter: a vast and unexplored molecular space.
PMID:34536106
Differential Abundance of Brain Mitochondrial Proteins in Yak and Cattle: A Proteomics-Based Study.
PMID:34532350
Shotgun-based proteomics of extracellular vesicles in Alzheimer's disease reveals biomarkers involved in immunological and coagulation pathways.
PMID:34531462
Activation loop phosphorylation of a non-RD receptor kinase initiates plant innate immune signaling.
PMID:34531323
APOBEC3C, a nucleolar protein induced by genotoxins, is excluded from DNA damage sites.
PMID:34528388
Multiomic Analyses of Dopaminergic Neurons Isolated from Human Substantia Nigra in Parkinson's Disease: A Descriptive and Exploratory Study.
PMID:34528139
Δ133p53β isoform pro-invasive activity is regulated through an aggregation-dependent mechanism in cancer cells.
PMID:34526502
Quantitative proteomics identifies PTP1B as modulator of B cell antigen receptor signaling.
PMID:34526379
Multiplexed drug-based selection and counterselection genetic manipulations in Drosophila.
PMID:34525356
Dynamic reconfiguration of pro-apoptotic BAK on membranes.
PMID:34523147
MULocDeep: A deep-learning framework for protein subcellular and suborganellar localization prediction with residue-level interpretation.
PMID:34522290
Phosphoproteomic profiling of the hippocampus of offspring rats exposed to prenatal stress.
PMID:34520625
Formation of a protein corona on the surface of extracellular vesicles in blood plasma.
PMID:34520123
A microenvironment-inspired synthetic three-dimensional model for pancreatic ductal adenocarcinoma organoids.
PMID:34518665
The glycine arginine-rich domain of the RNA-binding protein nucleolin regulates its subcellular localization.
PMID:34515347
Altered ceramide metabolism is a feature in the extracellular vesicle-mediated spread of alpha-synuclein in Lewy body disorders.
PMID:34514546
Discovery of Novel Markers for Identifying Cognitive Decline Using Neuron-Derived Exosomes.
PMID:34512304
Immunopeptidogenomics: Harnessing RNA-Seq to Illuminate the Dark Immunopeptidome.
PMID:34509645
Expression of CD49f defines subsets of human regulatory T cells with divergent transcriptional landscape and function that correlate with ulcerative colitis disease activity.
PMID:34504692
Protein-gene Expression Nexus: Comprehensive characterization of human cancer cell lines with proteogenomic analysis.
PMID:34504668
CD38 Deficiency Ameliorates Chronic Graft-Versus-Host Disease Murine Lupus via a B-Cell-Dependent Mechanism.
PMID:34504495
Sequences in the cytoplasmic tail of SARS-CoV-2 Spike facilitate expression at the cell surface and syncytia formation.
PMID:34504087
Defining the Tumor Microenvironment by Integration of Immunohistochemistry and Extracellular Matrix Targeted Imaging Mass Spectrometry.
PMID:34503228
Intra-Tumor Heterogeneity Revealed by Mass Spectrometry Imaging Is Associated with the Prognosis of Breast Cancer.
PMID:34503159
Auxin Metabolome Profiling in the Arabidopsis Endoplasmic Reticulum Using an Optimised Organelle Isolation Protocol.
PMID:34502279
Comparison of LFQ and IPTL for Protein Identification and Relative Quantification.
PMID:34500763
Impact of alanyl-tRNA synthetase editing deficiency in yeast.
PMID:34500470
Deamidation drives molecular aging of the SARS-CoV-2 spike protein receptor-binding motif.
PMID:34499924
Proteome Analysis of Condensed Barley Mitotic Chromosomes.
PMID:34497629
The EDS1-PAD4-ADR1 node mediates Arabidopsis pattern-triggered immunity.
PMID:34497423
CSF Chitinase 3-Like 2 Is Associated With Long-term Disability Progression in Patients With Progressive Multiple Sclerosis.
PMID:34497102
Construction of à la carte QconCAT protein standards for multiplexed quantification of user-specified target proteins.
PMID:34496840
Burkholderia PglL enzymes are Serine preferring oligosaccharyltransferases which target conserved proteins across the Burkholderia genus.
PMID:34493791
Tianeptine modulates synaptic vesicle dynamics and favors synaptic mitochondria processes in socially isolated rats.
PMID:34493757
Redox proteomic study of Bacillus cereus thiol proteome during fermentative anaerobic growth.
PMID:34493209
A systemic cell cycle block impacts stage-specific histone modification profiles during Xenopus embryogenesis.
PMID:34491983
A Streamlined Data Analysis Pipeline for the Identification of Sites of Citrullination.
PMID:34491035
Metaproteomic Insights Into the Microbial Community in Pozol.
PMID:34490328
Protein Targets of Acetaminophen Covalent Binding in Rat and Mouse Liver Studied by LC-MS/MS.
PMID:34490218
Linking inherent O-Linked Protein Glycosylation of YghJ to Increased Antigen Potential.
PMID:34490144
Effect and Response of Quercus ilex subsp. ballota [Desf.] Samp. Seedlings From Three Contrasting Andalusian Populations to Individual and Combined Phytophthora cinnamomi and Drought Stresses.
PMID:34490021
Beyond Self-Resistance: ABCF ATPase LmrC Is a Signal-Transducing Component of an Antibiotic-Driven Signaling Cascade Accelerating the Onset of Lincomycin Biosynthesis.
PMID:34488446
Unraveling the relevance of the polyadenylation factor EhCFIm25 in Entamoeba histolytica through proteomic analysis.
PMID:34486252
Widespread ribosome stalling in a genome-reduced bacterium and the need for translational quality control.
PMID:34485867
Maternal Chronodisruption Throughout Pregnancy Impairs Glucose Homeostasis and Adipose Tissue Physiology in the Male Rat Offspring.
PMID:34484111
Absolute quantitative proteomics using the total protein approach to identify novel clinical immunohistochemical markers in renal neoplasms.
PMID:34482820
Protease-sensitive regions in amyloid light chains: what a common pattern of fragmentation across organs suggests about aggregation.
PMID:34482629
Proteomic traits vary across taxa in a coastal Antarctic phytoplankton bloom.
PMID:34482372
Proteomic signatures of myeloid derived suppressor cells from liver and lung metastases reveal functional divergence and potential therapeutic targets.
PMID:34482371
A Proteomic Study on the Membrane Protein Fraction of T Cells Confirms High Substrate Selectivity for the ER Translocation Inhibitor Cyclotriazadisulfonamide.
PMID:34481949
The miR-193a-5p/NCX2/AKT axis promotes invasion and metastasis of osteosarcoma.
PMID:34476004
Automated Phosphopeptide Enrichment for Gram-Positive Bacteria.
PMID:34473931
Tissue environment, not ontogeny, defines murine intestinal intraepithelial T lymphocytes.
PMID:34473623
Column-based Technology for CD9-HPLC Immunoaffinity Isolation of Serum Extracellular Vesicles.
PMID:34473505
CARS senses cysteine deprivation to activate AMPK for cell survival.
PMID:34472622
Defining the RBPome of primary T helper cells to elucidate higher-order Roquin-mediated mRNA regulation.
PMID:34471108
Liver-Dependent Lung Remodeling during Systemic Inflammation Shapes Responses to Secondary Infection.
PMID:34470857
A NSD3-targeted PROTAC suppresses NSD3 and cMyc oncogenic nodes in cancer cells.
PMID:34469831
FAN1 controls mismatch repair complex assembly via MLH1 retention to stabilize CAG repeat expansion in Huntington's disease.
PMID:34469738
Patient-specific iPSCs carrying an SFTPC mutation reveal the intrinsic alveolar epithelial dysfunction at the inception of interstitial lung disease.
PMID:34469722
Polo-like kinase 1 (Plk1) regulates DNA replication origin firing and interacts with Rif1 in Xenopus.
PMID:34469577
Rabbit Antidiethoxyphosphotyrosine Antibody, Made by Single B Cell Cloning, Detects Chlorpyrifos Oxon-Modified Proteins in Cultured Cells and Immunopurifies Modified Peptides for Mass Spectrometry.
PMID:34469172
Artificial sweeteners stimulate horizontal transfer of extracellular antibiotic resistance genes through natural transformation.
PMID:34465899
High levels of TFAM repress mammalian mitochondrial DNA transcription in vivo.
PMID:34462320
Proteomic analysis demonstrates the role of the quality control protease LONP1 in mitochondrial protein aggregation.
PMID:34461102
Deep Succinylproteomics of Brain Tissues from Intracerebral Hemorrhage with Inhibition of Toll-Like Receptor 4 Signaling.
PMID:34460038
Integration of Functional Imaging, Cytometry, and Unbiased Proteomics Reveals New Features of Endothelial-to-Mesenchymal Transition in Ischemic Mitral Valve Regurgitation in Human Patients.
PMID:34458332
Quantitative Proteomics and Relative Enzymatic Activities Reveal Different Mechanisms in Two Peanut Cultivars (Arachis hypogaea L.) Under Waterlogging Conditions.
PMID:34456956
Identification of Allobaculum mucolyticum as a novel human intestinal mucin degrader.
PMID:34455931
Proteome Landscape of Epithelial-to-Mesenchymal Transition (EMT) of Retinal Pigment Epithelium Shares Commonalities With Malignancy-Associated EMT.
PMID:34455105
Meta-proteomic analysis of the Shandrin mammoth by EVA technology and high-resolution mass spectrometry: what is its gut microbiota telling us?
PMID:34453585
Identification of potential autoantigens in anti-CCP-positive and anti-CCP-negative rheumatoid arthritis using citrulline-specific protein arrays.
PMID:34453079
Structure of the phosphoinositide 3-kinase (PI3K) p110γ-p101 complex reveals molecular mechanism of GPCR activation.
PMID:34452907
Identification of novel ADAMTS1, ADAMTS4 and ADAMTS5 cleavage sites in versican using a label-free quantitative proteomics approach.
PMID:34450332
CSF Proteomic Alzheimer's Disease-Predictive Subtypes in Cognitively Intact Amyloid Negative Individuals.
PMID:34449748
Proteomic analysis of machine perfusion solution from brain dead donor kidneys reveals that elevated complement, cytoskeleton and lipid metabolism proteins are associated with 1-year outcome.
PMID:34448265
First identification of ITM2B interactome in the human retina.
PMID:34446781
Epigenetic inactivation of the autophagy-lysosomal system in appendix in Parkinson's disease.
PMID:34446734
Unexpected organellar locations of ESCRT machinery in Giardia intestinalis and complex evolutionary dynamics spanning the transition to parasitism in the lineage Fornicata.
PMID:34446013
The Arabidopsis HY2 Gene Acts as a Positive Regulator of NaCl Signaling during Seed Germination.
PMID:34445714
Within-Host Adaptation of Staphylococcus aureus in a Bovine Mastitis Infection Is Associated with Increased Cytotoxicity.
PMID:34445550
Differential Retinal Protein Expression in Primary and Secondary Retinal Ganglion Cell Degeneration Identified by Integrated SWATH and Target-Based Proteomics.
PMID:34445296
Donkey Milk Fermentation by Lactococcus lactis subsp. cremoris and Lactobacillus rhamnosus Affects the Antiviral and Antibacterial Milk Properties.
PMID:34443691
A Novel Approach for the Discovery of Biomarkers of Radiotherapy Response in Breast Cancer.
PMID:34442440
Proteomic Analysis of Niemann-Pick Type C Hepatocytes Reveals Potential Therapeutic Targets for Liver Damage.
PMID:34440927
Regulation of the HTRA2 Protease Activity by an Inhibitory Antibody-Derived Peptide Ligand and the Influence on HTRA2-Specific Protein Interaction Networks in Retinal Tissues.
PMID:34440217
Epithelial Cell Line Derived from Endometriotic Lesion Mimics Macrophage Nervous Mechanism of Pain Generation on Proteome and Metabolome Levels.
PMID:34439896
The Fatty Acid and Protein Profiles of Circulating CD81-Positive Small Extracellular Vesicles Are Associated with Disease Stage in Melanoma Patients.
PMID:34439311
Network-Based Integration of Multi-Omics Data Identifies the Determinants of miR-491-5p Effects.
PMID:34439123
The autoimmune signature of hyperinflammatory multisystem inflammatory syndrome in children.
PMID:34437303
Complexome profiling on the Chlamydomonas lpa2 mutant reveals insights into PSII biogenesis and new PSII associated proteins.
PMID:34436580
Mycobacterium avium subsp. paratuberculosis Proteome Changes Profoundly in Milk.
PMID:34436489
Scaffold-free 3D cell culture of primary skin fibroblasts induces profound changes of the matrisome.
PMID:34435183
Editorial: Integration of Multi-Omics Techniques in Cancer.
PMID:34434225
T cell receptor recognition of hybrid insulin peptides bound to HLA-DQ8.
PMID:34433824
An in vitro vesicle formation assay reveals cargo clients and factors that mediate vesicular trafficking.
PMID:34433667
Skin exposure to UVB light induces a skin-brain-gonad axis and sexual behavior.
PMID:34433056
The related coactivator complexes SAGA and ATAC control embryonic stem cell self-renewal through acetyltransferase-independent mechanisms.
PMID:34433046
Intratumoral injection of caerin 1.1 and 1.9 peptides increases the efficacy of vaccinated TC-1 tumor-bearing mice with PD-1 blockade by modulating macrophage heterogeneity and the activation of CD8+ T cells in the tumor microenvironment.
PMID:34429969
The self-peptide repertoire plays a critical role in transplant tolerance induction.
PMID:34428180
Comparative Molecular and Immunoregulatory Analysis of Extracellular Vesicles from Candida albicans and Candida auris.
PMID:34427507
Plant pathogens convergently evolved to counteract redundant nodes of an NLR immune receptor network.
PMID:34424903
Matrix-Bound Growth Factors are Released upon Cartilage Compression by an Aggrecan-Dependent Sodium Flux that is Lost in Osteoarthritis.
PMID:34423304
Sex-Specific Social Behavior and Amygdala Proteomic Deficits in Foxp2 +/- Mutant Mice.
PMID:34421555
Proteomic characterization of secretory granules in dopaminergic neurons indicates chromogranin/secretogranin-mediated protein processing impairment in Parkinson's disease.
PMID:34420933
IMProv: A Resource for Cross-link-Driven Structure Modeling that Accommodates Protein Dynamics.
PMID:34418567
Bidirectional epithelial-mesenchymal crosstalk provides self-sustaining profibrotic signals in pulmonary fibrosis.
PMID:34418430
Histone H4 lysine 20 mono-methylation directly facilitates chromatin openness and promotes transcription of housekeeping genes.
PMID:34417450
Adaptive optimization of the OXPHOS assembly line partially compensates lrpprc-dependent mitochondrial translation defects in mice.
PMID:34413467
Bacterial translation machinery for deliberate mistranslation of the genetic code.
PMID:34413202
A novel NF-κB regulator encoded by circPLCE1 inhibits colorectal carcinoma progression by promoting RPS3 ubiquitin-dependent degradation.
PMID:34412652
The Arabidopsis PeptideAtlas: Harnessing worldwide proteomics data to create a comprehensive community proteomics resource.
PMID:34411258
Comparative phosphoproteomic analysis of tomato genotypes with contrasting cadmium tolerance.
PMID:34410462
Proteomic profiling of the oncogenic septin 9 reveals isoform-specific interactions in breast cancer cells.
PMID:34409731
Nhp2 is a reader of H2AQ105me and part of a network integrating metabolism with rRNA synthesis.
PMID:34409714
Cotranslational prolyl hydroxylation is essential for flavivirus biogenesis.
PMID:34408324
Off-the-shelf proximity biotinylation for interaction proteomics.
PMID:34408139
Quantifying the phase separation property of chromatin-associated proteins under physiological conditions using an anti-1,6-hexanediol index.
PMID:34404448
Immunopeptidomics toolkit library (IPTK): a python-based modular toolbox for analyzing immunopeptidomics data.
PMID:34404349
A unique GCN5 histone acetyltransferase complex controls erythrocyte invasion and virulence in the malaria parasite Plasmodium falciparum.
PMID:34403450
Matrix-assisted laser desorption ionization mass spectrometry profiling of plasma exosomes evaluates osteosarcoma metastasis.
PMID:34401680
CHIP-dependent regulation of the actin cytoskeleton is linked to neuronal cell membrane integrity.
PMID:34401662
Large-scale and high-resolution mass spectrometry-based proteomics profiling defines molecular subtypes of esophageal cancer for therapeutic targeting.
PMID:34400640
Structural basis for ALK2/BMPR2 receptor complex signaling through kinase domain oligomerization.
PMID:34400635
Ligand-induced native G-quadruplex stabilization impairs transcription initiation.
PMID:34400476
Proteomic Signature of Host Response to SARS-CoV-2 Infection in the Nasopharynx.
PMID:34400346
pUL21 is a viral phosphatase adaptor that promotes herpes simplex virus replication and spread.
PMID:34398933
BRD9 is a druggable component of interferon-stimulated gene expression and antiviral activity.
PMID:34397140
Analysis of circulating protein aggregates as a route of investigation into neurodegenerative disorders.
PMID:34396108
CD30-Positive Extracellular Vesicles Enable the Targeting of CD30-Negative DLBCL Cells by the CD30 Antibody-Drug Conjugate Brentuximab Vedotin.
PMID:34395429
Plasmodiophora brassicae-Triggered Cell Enlargement and Loss of Cellular Integrity in Root Systems Are Mediated by Pectin Demethylation.
PMID:34394168
Identification of COVID-19 prognostic markers and therapeutic targets through meta-analysis and validation of Omics data from nasopharyngeal samples.
PMID:34392148
A Universal Peptide Matrix Interactomics Approach to Disclose Motif-Dependent Protein Binding.
PMID:34391889
Proteome and functional decline as platelets age in the circulation.
PMID:34390534
The conformational stability of pro-apoptotic BAX is dictated by discrete residues of the protein core.
PMID:34389733
Neuronal Nsun2 deficiency produces tRNA epitranscriptomic alterations and proteomic shifts impacting synaptic signaling and behavior.
PMID:34389722
Characterization of an A3G-VifHIV-1-CRL5-CBFβ Structure Using a Cross-linking Mass Spectrometry Pipeline for Integrative Modeling of Host-Pathogen Complexes.
PMID:34389466
Expression of a human cDNA in moss results in spliced mRNAs and fragmentary protein isoforms.
PMID:34385580
PERM1 interacts with the MICOS-MIB complex to connect the mitochondria and sarcolemma via ankyrin B.
PMID:34385433
Online Nanoflow Two-Dimension Comprehensive Active Modulation Reversed Phase-Reversed Phase Liquid Chromatography High-Resolution Mass Spectrometry for Metaproteomics of Environmental and Microbiome Samples.
PMID:34384028
Proteomic analysis of ubiquitination substrates reveals a CTLH E3 ligase complex-dependent regulation of glycolysis.
PMID:34383978
Multimodal platform for assessing drug distribution and response in clinical trials.
PMID:34383057
Transgenic modeling of Ndr2 gene amplification reveals disturbance of hippocampus circuitry and function.
PMID:34381982
Mass Spectrometry Proteotyping-Based Detection and Identification of Staphylococcus aureus, Escherichia coli, and Candida albicans in Blood.
PMID:34381737
Gastrobodies are engineered antibody mimetics resilient to pepsin and hydrochloric acid.
PMID:34381153
Temporal omics analysis in Syrian hamsters unravel cellular effector responses to moderate COVID-19.
PMID:34381043
Chd1 protects genome integrity at promoters to sustain hypertranscription in embryonic stem cells.
PMID:34381042
Proteomics informed by transcriptomics for a qualitative and quantitative analysis of the sialoproteome of adult Ornithodoros moubata ticks.
PMID:34380568
Hepatitis C virus treatment with direct-acting antivirals induces rapid changes in the hepatic proteome.
PMID:34379872
A Multi-omics Longitudinal Study Reveals Alteration of the Leukocyte Activation Pathway in COVID-19 Patients.
PMID:34379420
NEK1-mediated retromer trafficking promotes blood-brain barrier integrity by regulating glucose metabolism and RIPK1 activation.
PMID:34376696
An alternate covalent form of platelet αIIbβ3 integrin that resides in focal adhesions and has altered function.
PMID:34375384
IceR improves proteome coverage and data completeness in global and single-cell proteomics.
PMID:34373457
Targeted in situ cross-linking mass spectrometry and integrative modeling reveal the architectures of three proteins from SARS-CoV-2.
PMID:34373319
Transcriptome and Proteomic Analysis Reveals Up-Regulation of Innate Immunity-Related Genes Expression in Caprine Herpesvirus 1 Infected Madin Darby Bovine Kidney Cells.
PMID:34372499
Optimization of Protein Isolation and Label-Free Quantitative Proteomic Analysis in Four Different Tissues of Korean Ginseng.
PMID:34371612
Modern Acinetobacter baumannii clinical isolates replicate inside spacious vacuoles and egress from macrophages.
PMID:34370792
Adaptive laboratory evolution of microbial co-cultures for improved metabolite secretion.
PMID:34370382
SCFFbxw5 targets kinesin-13 proteins to facilitate ciliogenesis.
PMID:34368969
Extensive heterogeneity of glycopeptides in plasma revealed by deep glycoproteomic analysis using size-exclusion chromatography.
PMID:34368825
Lipid Body Dynamics in Shoot Meristems: Production, Enlargement, and Putative Organellar Interactions and Plasmodesmal Targeting.
PMID:34367200
Exosome-Depleted Excretory-Secretory Products of the Fourth-Stage Larval Angiostrongylus cantonensis Promotes Alternative Activation of Macrophages Through Metabolic Reprogramming by the PI3K-Akt Pathway.
PMID:34367145
Blood Plasma Biomarkers for Woody Breast Disease in Commercial Broilers.
PMID:34366899
Cellular costs underpin micronutrient limitation in phytoplankton.
PMID:34362734
Characterization of the Heat-Stable Proteome during Seed Germination in Arabidopsis with Special Focus on LEA Proteins.
PMID:34360938
Characterization of the Free and Membrane-Associated Fractions of the Thylakoid Lumen Proteome in Arabidopsis thaliana.
PMID:34360890
A Proteomic Study Suggests Stress Granules as New Potential Actors in Radiation-Induced Bystander Effects.
PMID:34360718
Comparative Proteomic and Metabolomic Analysis of Human Osteoblasts, Differentiated from Dental Pulp Stem Cells, Hinted Crucial Signaling Pathways Promoting Osteogenesis.
PMID:34360674
Metabolomic Identification of Anticancer Metabolites of Australian Propolis and Proteomic Elucidation of Its Synergistic Mechanisms with Doxorubicin in the MCF7 Cells.
PMID:34360606
Complexome Profiling: Assembly and Remodeling of Protein Complexes.
PMID:34360575
Phosphorylation in the Charged Linker Modulates Interactions and Secretion of Hsp90β.
PMID:34359868
Mass Spectrometry-Based Proteomic Discovery of Prognostic Biomarkers in Adrenal Cortical Carcinoma.
PMID:34359790
Targeted Mass Spectrometry Enables Quantification of Novel Pharmacodynamic Biomarkers of ATM Kinase Inhibition.
PMID:34359745
Cloud Computing Based Immunopeptidomics Utilizing Community Curated Variant Libraries Simplifies and Improves Neo-Antigen Discovery in Metastatic Melanoma.
PMID:34359654
Genetic depletion of the RNA helicase DDX3 leads to impaired elongation of translating ribosomes triggering co-translational quality control of newly synthesized polypeptides.
PMID:34358325
Extracellular Proteome Analysis Shows the Abundance of Histidine Kinase Sensor Protein, DNA Helicase, Putative Lipoprotein Containing Peptidase M75 Domain and Peptidase C39 Domain Protein in Leptospira interrogans Grown in EMJH Medium.
PMID:34358002
Antisense Oligonucleotide-Based Therapeutic against Menin for Triple-Negative Breast Cancer Treatment.
PMID:34356858
A size-exclusion-based approach for purifying extracellular vesicles from human plasma.
PMID:34355211
Yippee like 4 (Ypel4) is essential for normal mouse red blood cell membrane integrity.
PMID:34354145
The middle lipin domain adopts a membrane-binding dimeric protein fold.
PMID:34354069
Microfluidic device with brain extracellular matrix promotes structural and functional maturation of human brain organoids.
PMID:34354063
The biochemical basis of mitochondrial dysfunction in Zellweger Spectrum Disorder.
PMID:34351705
A general role for TANGO1, encoded by MIA3, in secretory pathway organization and function.
PMID:34350936
Proteomic analysis to identify markers for response to neoadjuvant treatment in esophageal and gastroesophageal cancer.
PMID:34350714
Puf6 primes 60S pre-ribosome nuclear export at low temperature.
PMID:34349113
The COVIDome Explorer researcher portal.
PMID:34348131
Interaction with the CCT chaperonin complex limits APOBEC3A cytidine deaminase cytotoxicity.
PMID:34347354
Proteomics and Phosphoproteomics Profiling of Drug-Addicted BRAFi-Resistant Melanoma Cells.
PMID:34343000
Species-Specific Endotoxin Stimulus Determines Toll-Like Receptor 4- and Caspase 11-Mediated Pathway Activation Characteristics.
PMID:34342534
Time-Resolved Proteome Analysis of Listeria monocytogenes during Infection Reveals the Role of the AAA+ Chaperone ClpC for Host Cell Adaptation.
PMID:34342529
ppx: Programmatic Access to Proteomics Data Repositories.
PMID:34342226
CD209L/L-SIGN and CD209/DC-SIGN Act as Receptors for SARS-CoV-2.
PMID:34341769
Salivary proteome of aphthous stomatitis reveals the participation of vitamin metabolism, nutrients, and bacteria.
PMID:34341431
Longitudinal stability of urinary extracellular vesicle protein patterns within and between individuals.
PMID:34341426
Identification of response signatures for tankyrase inhibitor treatment in tumor cell lines.
PMID:34337362
Protein Identification of Spermatozoa and Seminal Plasma in Bottlenose Dolphin (Tursiops truncatus).
PMID:34336830
High-throughput drug screening identifies the ATR-CHK1 pathway as a therapeutic vulnerability of CALR mutated hematopoietic cells.
PMID:34333533
Quantitative Proteomic and Metabolomic Profiling Reveals Altered Mitochondrial Metabolism and Folate Biosynthesis Pathways in the Aging Drosophila Eye.
PMID:34332122
Affinity Proteomics and Deglycoproteomics Uncover Novel EDEM2 Endogenous Substrates and an Integrative ERAD Network.
PMID:34332121
Stress-primed secretory autophagy promotes extracellular BDNF maturation by enhancing MMP9 secretion.
PMID:34330919
Metabolic control of nitrogen fixation in rhizobium-legume symbioses.
PMID:34330708
Response: Commentary: An In Silico-In Vitro Pipeline Identifying an HLA-A*02:01+ KRAS G12V+ Spliced Epitope Candidate for a Broad Tumor-Immune Response in Cancer Patients.
PMID:34326838
Proteomic study of Desulfovibrio ferrophilus IS5 reveals overexpressed extracellular multi-heme cytochrome associated with severe microbiologically influenced corrosion.
PMID:34326431
Apolipoprotein A-I modulates HDL particle size in the absence of apolipoprotein A-II.
PMID:34324889
Proteomic analysis reveals dexamethasone rescues matrix breakdown but not anabolic dysregulation in a cartilage injury model.
PMID:34322675
Stearic acid blunts growth-factor signaling via oleoylation of GNAI proteins.
PMID:34321466
The Fish Pathogen Aliivibrio salmonicida LFI1238 Can Degrade and Metabolize Chitin despite Gene Disruption in the Chitinolytic Pathway.
PMID:34319813
Toward Comprehensive Plasma Proteomics by Orthogonal Protease Digestion.
PMID:34319755
Analysis of pancreatic extracellular matrix protein post-translational modifications via electrostatic repulsion-hydrophilic interaction chromatography coupled with mass spectrometry.
PMID:34318855
Phospho-regulated Bim1/EB1 interactions trigger Dam1c ring assembly at the budding yeast outer kinetochore.
PMID:34313341
DDASSQ: An open-source, multiple peptide sequencing strategy for label free quantification based on an OpenMS pipeline in the KNIME analytics platform.
PMID:34312990
Heterogeneous Expression of Nuclear Encoded Mitochondrial Genes Distinguishes Inhibitory and Excitatory Neurons.
PMID:34312306
miR-1 coordinately regulates lysosomal v-ATPase and biogenesis to impact proteotoxicity and muscle function during aging.
PMID:34311841
Role of Premycofactocin Synthase in Growth, Microaerophilic Adaptation, and Metabolism of Mycobacterium tuberculosis.
PMID:34311585
Deregulation of the Kallikrein Protease Family in the Salivary Glands of the Sjögren's Syndrome ERdj5 Knockout Mouse Model.
PMID:34305928
Deacetylation as a receptor-regulated direct activation switch for pannexin channels.
PMID:34301959
The bZIP Transcription Factor HapX Is Post-Translationally Regulated to Control Iron Homeostasis in Aspergillus fumigatus.
PMID:34299357
Compatibility of Distinct Label-Free Proteomic Workflows in Absolute Quantification of Proteins Linked to the Oocyte Quality in Human Follicular Fluid.
PMID:34299044
Calcitriol Promotes Differentiation of Glioma Stem-Like Cells and Increases Their Susceptibility to Temozolomide.
PMID:34298790
Tyrosine Phosphoproteomics of Patient-Derived Xenografts Reveals Ephrin Type-B Receptor 4 Tyrosine Kinase as a Therapeutic Target in Pancreatic Cancer.
PMID:34298619
The signal transducer CD24 suppresses the germ cell program and promotes an ectodermal rather than mesodermal cell fate in embryonal carcinomas.
PMID:34293822
DIA-Based Proteome Profiling of Nasopharyngeal Swabs from COVID-19 Patients.
PMID:34292740
Model-guided development of an evolutionarily stable yeast chassis.
PMID:34292675
Glycolysis downregulation is a hallmark of HIV-1 latency and sensitizes infected cells to oxidative stress.
PMID:34289240
Identification of Actin Filament-Associated Proteins in Giardia lamblia.
PMID:34287056
M2aia-Interactive, fast, and memory-efficient analysis of 2D and 3D multi-modal mass spectrometry imaging data.
PMID:34282451
MX2-mediated innate immunity against HIV-1 is regulated by serine phosphorylation.
PMID:34282309
Specificities of exosome versus small ectosome secretion revealed by live intracellular tracking of CD63 and CD9.
PMID:34282141
The Consequences of Soluble Epoxide Hydrolase Deletion on Tumorigenesis and Metastasis in a Mouse Model of Breast Cancer.
PMID:34281173
Extensive three-dimensional intratumor proteomic heterogeneity revealed by multiregion sampling in high-grade serous ovarian tumor specimens.
PMID:34278265
Oxidative stress induces coordinated remodeling of RNA-enzyme interactions.
PMID:34278261
Unraveling Subcellular and Ultrastructural Changes During Vitrification of Human Spermatozoa: Effect of a Mitochondria-Targeted Antioxidant and a Permeable Cryoprotectant.
PMID:34277615
Data-Independent Acquisition Proteomics Reveals Long-Term Biomarkers in the Serum of C57BL/6J Mice Following Local High-Dose Heart Irradiation.
PMID:34277544
PAD2-mediated citrullination of Fibulin-5 promotes elastogenesis.
PMID:34274450
Nemertean, Brachiopod, and Phoronid Neuropeptidomics Reveals Ancestral Spiralian Signaling Systems.
PMID:34272863
Long non-coding RNA MIR200CHG promotes breast cancer proliferation, invasion, and drug resistance by interacting with and stabilizing YB-1.
PMID:34272387
Biochemical characterization of protease activity of Nsp3 from SARS-CoV-2 and its inhibition by nanobodies.
PMID:34270554
Zika virus infection of the placenta alters extracellular matrix proteome.
PMID:34264436
Functionally Essential Tubular Proteins Are Lost to Urine-Excreted, Large Extracellular Vesicles during Chronic Renal Insufficiency.
PMID:34263177
Quantitative Proteomics Reveal That Metabolic Improvement Contributes to the Cardioprotective Effect of T89 on Isoproterenol-Induced Cardiac Injury.
PMID:34262469
Structures of rhodopsin in complex with G-protein-coupled receptor kinase 1.
PMID:34262173
SARS-CoV-2 Disrupts Proximal Elements in the JAK-STAT Pathway.
PMID:34260266
Mechanistic insights into p53-regulated cytotoxicity of combined entinostat and irinotecan against colorectal cancer cells.
PMID:34258881
Evaluation of Protein Purification Techniques and Effects of Storage Duration on LC-MS/MS Analysis of Archived FFPE Human CRC Tissues.
PMID:34257588
Sphingolipids mediate polar sorting of PIN2 through phosphoinositide consumption at the trans-Golgi network.
PMID:34257291
IL-15 and PIM kinases direct the metabolic programming of intestinal intraepithelial lymphocytes.
PMID:34257288
Global kinome profiling reveals DYRK1A as critical activator of the human mitochondrial import machinery.
PMID:34257281
DDX21 is a p38-MAPK-sensitive nucleolar protein necessary for mouse preimplantation embryo development and cell-fate specification.
PMID:34255976
Cov-MS: A Community-Based Template Assay for Mass-Spectrometry-Based Protein Detection in SARS-CoV-2 Patients.
PMID:34254058
On the feasibility of deep learning applications using raw mass spectrometry data.
PMID:34252933
Antagonism of the mu-delta opioid receptor heterodimer enhances opioid antinociception by activating Src and calcium/calmodulin-dependent protein kinase II signaling.
PMID:34252907
Examining Pathways of Iron and Sulfur Acquisition, Trafficking, Deployment, and Storage in Mineral-Grown Methanogen Cells.
PMID:34251867
SOD1 is a Possible Predictor of COVID-19 Progression as Revealed by Plasma Proteomics.
PMID:34250342
Heat Stress-Dependent Association of Membrane Trafficking Proteins With mRNPs Is Selective.
PMID:34249042
Surfaceome and Exoproteome Dynamics in Dual-Species Pseudomonas aeruginosa and Staphylococcus aureus Biofilms.
PMID:34248881
Deep learning for peptide identification from metaproteomics datasets.
PMID:34246788
An mTORC1-GRASP55 signaling axis controls unconventional secretion to reshape the extracellular proteome upon stress.
PMID:34245671
Genetic architecture underlying the expression of eight α-amylase trypsin inhibitors.
PMID:34245321
LDIP cooperates with SEIPIN and LDAP to facilitate lipid droplet biogenesis in Arabidopsis.
PMID:34244767
Reciprocal interaction between SIRT6 and APC/C regulates genomic stability.
PMID:34244565
Arginine methylation promotes siRNA-binding specificity for a spermatogenesis-specific isoform of the Argonaute protein CSR-1.
PMID:34244496
LncRNA RCAT1 promotes tumor progression and metastasis via miR-214-5p/E2F2 axis in renal cell carcinoma.
PMID:34244473
The GAS6-AXL signaling pathway triggers actin remodeling that drives membrane ruffling, macropinocytosis, and cancer-cell invasion.
PMID:34244439
A ciliopathy complex builds distal appendages to initiate ciliogenesis.
PMID:34241634
Evaluation of an E. coli Cell Extract Prepared by Lysozyme-Assisted Sonication via Gene Expression, Phage Assembly and Proteomics.
PMID:34240805
Predicting the number of sulfur atoms in peptides and small proteins based on the observed aggregated isotope distribution.
PMID:34240492
Elastogenesis Correlates With Pigment Production in Murine Aortic Valve Leaflets.
PMID:34239903
MaxDIA enables library-based and library-free data-independent acquisition proteomics.
PMID:34239088
Niche stiffening compromises hair follicle stem cell potential during ageing by reducing bivalent promoter accessibility.
PMID:34239060
Proteomic signatures for perioperative oxygen delivery in skin after major elective surgery: mechanistic sub-study of a randomised controlled trial.
PMID:34238546
Inference of kinase-signaling networks in human myeloid cell line models by Phosphoproteomics using kinase activity enrichment analysis (KAEA).
PMID:34238254
Global mapping of Salmonella enterica-host protein-protein interactions during infection.
PMID:34237247
Software Options for the Analysis of MS-Proteomic Data.
PMID:34236654
The chimeric GaaR-XlnR transcription factor induces pectinolytic activities in the presence of D-xylose in Aspergillus niger.
PMID:34236481
Loss of MGA repression mediated by an atypical polycomb complex promotes tumor progression and invasiveness.
PMID:34236315
Sox9 Determines Translational Capacity During Early Chondrogenic Differentiation of ATDC5 Cells by Regulating Expression of Ribosome Biogenesis Factors and Ribosomal Proteins.
PMID:34235151
BANP opens chromatin and activates CpG-island-regulated genes.
PMID:34234345
Evolution of Polymyxin Resistance Regulates Colibactin Production in Escherichia coli.
PMID:34232632
Large-Scale Proteomic Assessment of Urinary Extracellular Vesicles Highlights Their Reliability in Reflecting Protein Changes in the Kidney.
PMID:34230103
Method development and characterisation of the low-molecular-weight peptidome of human wound fluids.
PMID:34227939
FIP200 controls the TBK1 activation threshold at SQSTM1/p62-positive condensates.
PMID:34226595
The proteolytic landscape of cells exposed to non-lethal stresses is shaped by executioner caspases.
PMID:34226511
High-Efficient Production of Adipose-Derived Stem Cell (ADSC) Secretome Through Maturation Process and Its Non-scarring Wound Healing Applications.
PMID:34222219
Histological and proteome analyses of Microbacterium foliorum-mediated decrease in arsenic toxicity in Melastoma malabathricum.
PMID:34221807
Mapping Salivary Proteases in Sjögren's Syndrome Patients Reveals Overexpression of Dipeptidyl Peptidase-4/CD26.
PMID:34220840
SETD7-mediated monomethylation is enriched on soluble Tau in Alzheimer's disease.
PMID:34215303
Meta-analysis defines principles for the design and analysis of co-fractionation mass spectrometry experiments.
PMID:34211188
ATR regulates neuronal activity by modulating presynaptic firing.
PMID:34210973
Identification of Nrl1 Domains Responsible for Interactions with RNA-Processing Factors and Regulation of Nrl1 Function by Phosphorylation.
PMID:34209806
Rintatolimod Induces Antiviral Activities in Human Pancreatic Cancer Cells: Opening for an Anti-COVID-19 Opportunity in Cancer Patients?
PMID:34207861
Differential Exoproteome and Biochemical Characterisation of Neoparamoeba perurans.
PMID:34207776
Proteome Profiling of PMJ2-R and Primary Peritoneal Macrophages.
PMID:34204832
Old World Vipers-A Review about Snake Venom Proteomics of Viperinae and Their Variations.
PMID:34204565
Age-Dependent Hippocampal Proteomics in the APP/PS1 Alzheimer Mouse Model: A Comparative Analysis with Classical SWATH/DIA and directDIA Approaches.
PMID:34202490
Advanced Fiber Type-Specific Protein Profiles Derived from Adult Murine Skeletal Muscle.
PMID:34201234
Differential Glycosite Profiling-A Versatile Method to Compare Membrane Glycoproteomes.
PMID:34200965
Inositol Signaling in the Basidiomycete Fungus Schizophyllum commune.
PMID:34200898
Spatially Enriched Paralog Rearrangements Argue Functionally Diverse Ribosomes Arise during Cold Acclimation in Arabidopsis.
PMID:34200446
Identification of Fucosylated SERPINA1 as a Novel Plasma Marker for Pancreatic Cancer Using Lectin Affinity Capture Coupled with iTRAQ-Based Quantitative Glycoproteomics.
PMID:34199928
Evaluation of Collagen Alterations in Early Precursor Lesions of High Grade Serous Ovarian Cancer by Second Harmonic Generation Microscopy and Mass Spectrometry.
PMID:34199725
Nucleoside Analogues Are Potent Inducers of Pol V-mediated Mutagenesis.
PMID:34198819
Reduced exploratory behavior in neuronal nucleoredoxin knockout mice.
PMID:34198070
EXO5-DNA structure and BLM interactions direct DNA resection critical for ATR-dependent replication restart.
PMID:34197737
The RNA-Binding Proteins SRP14 and HMGB3 Control HIV-1 Tat mRNA Processing and Translation During HIV-1 Latency.
PMID:34194479
Activated interleukin-7 receptor signaling drives B-cell acute lymphoblastic leukemia in mice.
PMID:34193976
Genomic and Proteomic Study of Andreprevotia ripae Isolated from an Anthill Reveals an Extensive Repertoire of Chitinolytic Enzymes.
PMID:34191517
Increased levels of mitochondrial import factor Mia40 prevent the aggregation of polyQ proteins in the cytosol.
PMID:34191328
PRISMA and BioID disclose a motifs-based interactome of the intrinsically disordered transcription factor C/EBPα.
PMID:34189442
Constrained G4 structures unveil topology specificity of known and new G4 binding proteins.
PMID:34188089
SLX4IP promotes RAP1 SUMOylation by PIAS1 to coordinate telomere maintenance through NF-κB and Notch signaling.
PMID:34187905
DOT1L complex regulates transcriptional initiation in human erythroleukemic cells.
PMID:34187895
Chemoproteomic Approach toward Probing the Interactomes of Perfluoroalkyl Substances.
PMID:34185510
Universal Spectrum Identifier for mass spectra.
PMID:34183830
Proximity Tagging Identifies the Glycan-Mediated Glycoprotein Interactors of Galectin-1 in Muscle Stem Cells.
PMID:34181849
In-House Packed Porous Graphitic Carbon Columns for Liquid Chromatography-Mass Spectrometry Analysis of N-Glycans.
PMID:34178940
p38-MAPK-mediated translation regulation during early blastocyst development is required for primitive endoderm differentiation in mice.
PMID:34172827
SMG5-SMG7 authorize nonsense-mediated mRNA decay by enabling SMG6 endonucleolytic activity.
PMID:34172724
Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.
PMID:34169593
Optimization of a human milk-directed quantitative sIgA ELISA method substantiated by mass spectrometry.
PMID:34169348
Antagonistic fungal enterotoxins intersect at multiple levels with host innate immune defences.
PMID:34166401
Infected insect gut reveals differentially expressed proteins for cellular redox, metal resistance and secretion system in Yersinia enterocolitica-Helicoverpa armigera pathogenic model.
PMID:34165641
Ultrasensitive single-cell proteomics workflow identifies >1000 protein groups per mammalian cell.
PMID:34163866
Design of a Proteolytically Stable Sodium-Calcium Exchanger 1 Activator Peptide for In Vivo Studies.
PMID:34163352
Multiomic analysis of the Arabian camel (Camelus dromedarius) kidney reveals a role for cholesterol in water conservation.
PMID:34163009
Soil metabolome response to whole-ecosystem warming at the Spruce and Peatland Responses under Changing Environments experiment.
PMID:34161254
The DNA Sensor IFIX Drives Proteome Alterations To Mobilize Nuclear and Cytoplasmic Antiviral Responses, with Its Acetylation Acting as a Localization Toggle.
PMID:34156286
Tyr-Asp inhibition of glyceraldehyde 3-phosphate dehydrogenase affects plant redox metabolism.
PMID:34156108
A small RNA regulates pprM, a modulator of pleiotropic proteins promoting DNA repair, in Deinococcus radiodurans under ionizing radiation.
PMID:34155239
Systematic detection of functional proteoform groups from bottom-up proteomic datasets.
PMID:34155216
Ca2+/calmodulin kinase II-dependent regulation of βIV-spectrin modulates cardiac fibroblast gene expression, proliferation, and contractility.
PMID:34153319
Identification of Full-Length Wild-Type and Mutant Huntingtin Interacting Proteins by Crosslinking Immunoprecipitation in Mice Brain Cortex.
PMID:34151850
Hepatocyte proteomes reveal the role of protein disulfide isomerase 4 in alpha 1-antitrypsin deficiency.
PMID:34151245
New Players in the Interaction Between Beetle Polygalacturonases and Plant Polygalacturonase-Inhibiting Proteins: Insights From Proteomics and Gene Expression Analyses.
PMID:34149758
Isolation Method and Characterization of Outer Membranes Vesicles of Helicobacter pylori Grown in a Chemically Defined Medium.
PMID:34149641
Proteomics support the threespine stickleback egg coat as a protective oocyte envelope.
PMID:34148267
Methanogenic archaea use a bacteria-like methyltransferase system to demethoxylate aromatic compounds.
PMID:34145392
Structural insights into an atypical secretory pathway kinase crucial for Toxoplasma gondii invasion.
PMID:34145271
Systematic profiling of protein complex dynamics reveals DNA-PK phosphorylation of IFI16 en route to herpesvirus immunity.
PMID:34144993
Platelet-derived growth factor receptor beta activates Abl2 via direct binding and phosphorylation.
PMID:34144039
Co-ordinated control of the Aurora B abscission checkpoint by PKCε complex assembly, midbody recruitment and retention.
PMID:34143863
Tick extracellular vesicles enable arthropod feeding and promote distinct outcomes of bacterial infection.
PMID:34140472
Development of selective protease inhibitors via engineering of the bait region of human α2-macroglobulin.
PMID:34139236
A time-resolved proteomic and prognostic map of COVID-19.
PMID:34139154
Comprehensive glycoproteomics shines new light on the complexity and extent of glycosylation in archaea.
PMID:34138841
Ultrasensitive NanoLC-MS of Subnanogram Protein Samples Using Second Generation Micropillar Array LC Technology with Orbitrap Exploris 480 and FAIMS PRO.
PMID:34137250
miR-29a/b1 Regulates the Luteinizing Hormone Secretion and Affects Mouse Ovulation.
PMID:34135859
Proteomics and Epidemiological Models of Human Aging.
PMID:34135771
Structural basis of GTPase-mediated mitochondrial ribosome biogenesis and recycling.
PMID:34135319
Stress granules inhibit fatty acid oxidation by modulating mitochondrial permeability.
PMID:34133922
TSSC4 is a component of U5 snRNP that promotes tri-snRNP formation.
PMID:34131137
Structure of Tau filaments in Prion protein amyloidoses.
PMID:34128081
Jejunal mucosa proteomics unravel metabolic adaptive processes to mild chronic heat stress in dairy cows.
PMID:34127774
Exploring antimicrobial resistance to beta-lactams, aminoglycosides and fluoroquinolones in E. coli and K. pneumoniae using proteogenomics.
PMID:34127720
IL-13 deficiency exacerbates lung damage and impairs epithelial-derived type 2 molecules during nematode infection.
PMID:34127548
RNAseq and quantitative proteomic analysis of Dictyostelium knock-out cells lacking the core autophagy proteins ATG9 and/or ATG16.
PMID:34126926
The Termite Fungal Cultivar Termitomyces Combines Diverse Enzymes and Oxidative Reactions for Plant Biomass Conversion.
PMID:34126770
Human tRNAs with inosine 34 are essential to efficiently translate eukarya-specific low-complexity proteins.
PMID:34125917
smORFer: a modular algorithm to detect small ORFs in prokaryotes.
PMID:34125903
Conservative production of galactosaminogalactan in Metarhizium is responsible for appressorium mucilage production and topical infection of insect hosts.
PMID:34125872
R1441G but not G2019S mutation enhances LRRK2 mediated Rab10 phosphorylation in human peripheral blood neutrophils.
PMID:34125248
Altered Glycosylation in the Aging Heart.
PMID:34124155
Papain-Like Cysteine Protease Gene Family in Fig (Ficus carica L.): Genome-Wide Analysis and Expression Patterns.
PMID:34122493
Top-Down Proteomics of Human Saliva Highlights Anti-inflammatory, Antioxidant, and Antimicrobial Defense Responses in Alzheimer Disease.
PMID:34121996
Revealing the Structural Plasticity of SARS-CoV-2 nsp7 and nsp8 Using Structural Proteomics.
PMID:34121407
Schizosaccharomyces pombe Ppr10 and Mpa1 together mediate mitochondrial translational initiation.
PMID:34119521
Selective delignification of poplar wood with a newly isolated white-rot basidiomycete Peniophora incarnata T-7 by submerged fermentation to enhance saccharification.
PMID:34118970
Talin mechanosensitivity is modulated by a direct interaction with cyclin-dependent kinase-1.
PMID:34118235
Assessment of a complete and classified platelet proteome from genome-wide transcripts of human platelets and megakaryocytes covering platelet functions.
PMID:34117303
Overexpression of human BAG3P209L in mice causes restrictive cardiomyopathy.
PMID:34117258
Aedes aegypti SNAP and a calcium transporter ATPase influence dengue virus dissemination.
PMID:34115766
Blocking utilization of major plant biomass polysaccharides leads Aspergillus niger towards utilization of minor components.
PMID:34114741
Integrated proteomic and transcriptomic profiling identifies aberrant gene and protein expression in the sarcomere, mitochondrial complex I, and the extracellular matrix in Warmblood horses with myofibrillar myopathy.
PMID:34112090
ELOF1 is a transcription-coupled DNA repair factor that directs RNA polymerase II ubiquitylation.
PMID:34108663
Structural insight on assembly-line catalysis in terpene biosynthesis.
PMID:34108468
Site-specific ubiquitylation acts as a regulator of linker histone H1.
PMID:34108453
Integrin intra-heterodimer affinity inversely correlates with integrin activatability.
PMID:34107244
Multiomic analysis of stretched osteocytes reveals processes and signalling linked to bone regeneration and cancer.
PMID:34099736
Quantitative single-cell proteomics as a tool to characterize cellular hierarchies.
PMID:34099695
Reprogramming of microRNA expression via E2F1 downregulation promotes Salmonella infection both in infected and bystander cells.
PMID:34099666
Kinetics of Abacavir-Induced Remodelling of the Major Histocompatibility Complex Class I Peptide Repertoire.
PMID:34093574
Jiedu Tongluo Granules Ameliorates Post-stroke Depression Rat Model via Regulating NMDAR/BDNF Signaling Pathway.
PMID:34093193
Proteomic Dissection of the Impact of Environmental Exposures on Mouse Seminal Vesicle Function.
PMID:34089863
Mapping of m6A and Its Regulatory Targets in Prostate Cancer Reveals a METTL3-Low Induction of Therapy Resistance.
PMID:34088870
Embryonic developmental arrest in the annual killifish Austrolebias charrua: A proteomic approach to diapause III.
PMID:34086690
Reciprocal priming between receptor tyrosine kinases at recycling endosomes orchestrates cellular signalling outputs.
PMID:34086370
Tengdan Capsule Prevents Hypertensive Kidney Damage in SHR by Inhibiting Periostin-Mediated Renal Fibrosis.
PMID:34084130
A multiplexed nanostructure-initiator mass spectrometry (NIMS) assay for simultaneously detecting glycosyl hydrolase and lignin modifying enzyme activities.
PMID:34083602
Kinases as Potential Therapeutic Targets for Anti-coronaviral Therapy.
PMID:34081439
Comprehensive Structure-Activity Profiling of Micheliolide and its Targeted Proteome in Leukemia Cells via Probe-Guided Late-Stage C-H Functionalization.
PMID:34079900
Tripartite Separation of Glomerular Cell Types and Proteomes from Reporter-Free Mice.
PMID:34074698
Age-Related Alterations in the Testicular Proteome of a Non-Human Primate.
PMID:34074003
Revisiting Ehrlichia ruminantium Replication Cycle Using Proteomics: The Host and the Bacterium Perspectives.
PMID:34073568
Quantitative Proteomic and Microcystin Production Response of Microcystis aeruginosa to Phosphorus Depletion.
PMID:34072711
Identification and Relative Quantification of hFSH Glycoforms in Women's Sera via MS-PRM-Based Approach.
PMID:34071747
Culture of Mycobacterium smegmatis in Different Carbon Sources to Induce In Vitro Cholesterol Consumption Leads to Alterations in the Host Cells after Infection: A Macrophage Proteomics Analysis.
PMID:34071265
Bone Diagenesis in Short Timescales: Insights from an Exploratory Proteomic Analysis.
PMID:34071025
Identification of Candidate Protein Biomarkers for CIN2+ Lesions from Self-Sampled, Dried Cervico-Vaginal Fluid Using LC-MS/MS.
PMID:34070587
Impacts of the Type I Toxin-Antitoxin System, SprG1/SprF1, on Staphylococcus aureus Gene Expression.
PMID:34070083
Cold Atmospheric-Pressure Plasma Caused Protein Damage in Methicillin-Resistant Staphylococcus aureus Cells in Biofilms.
PMID:34067642
α-Fodrin in Cytoskeletal Organization and the Activity of Certain Key Microtubule Kinesins.
PMID:34067543
Western Diet Induced Remodelling of the Tongue Proteome.
PMID:34066295
A Proteomic Approach for Systematic Mapping of Substrates of Human Deubiquitinating Enzymes.
PMID:34063716
Protein Kinase C Activation Drives a Differentiation Program in an Oligodendroglial Precursor Model through the Modulation of Specific Biological Networks.
PMID:34063504
Host Response of Atlantic Salmon (Salmo salar) Re-Inoculated with Paramoeba perurans.
PMID:34062978
Lysine demethylase LSD1 delivered via small extracellular vesicles promotes gastric cancer cell stemness.
PMID:34060205
Persistent proteomic changes in glutamatergic and GABAergic signaling in the amygdala of adolescent rats exposed to chlorpyrifos as juveniles.
PMID:34058248
Compartmentalized Proteomic Profiling Outlines the Crucial Role of the Classical Secretory Pathway during Recombinant Protein Production in Chinese Hamster Ovary Cells.
PMID:34056395
Tubulin Beta 2C Chain (TBB2C), a Potential Marker of Ovarian Cancer, an Insight from Ovarian Cancer Proteome Profile.
PMID:34056205
Benefits of Ion Mobility Separation and Parallel Accumulation-Serial Fragmentation Technology on timsTOF Pro for the Needs of Fast Photochemical Oxidation of Protein Analysis.
PMID:34056188
Comparative Proteomics Analysis for Elucidating the Interaction Between Host Cells and Toxoplasma gondii.
PMID:34055664
Proteomic profiling of murine biliary-derived hepatic organoids and their capacity for drug disposition, bioactivation and detoxification.
PMID:34050779
Restoration of energy homeostasis by SIRT6 extends healthy lifespan.
PMID:34050173
Automated annotation and visualisation of high-resolution spatial proteomic mass spectrometry imaging data using HIT-MAP.
PMID:34050164
Nuclear Phosphatidylinositol 3,4,5-Trisphosphate Interactome Uncovers an Enrichment in Nucleolar Proteins.
PMID:34048982
The COVID-19 Data Portal: accelerating SARS-CoV-2 and COVID-19 research through rapid open access data sharing.
PMID:34048576
Large-scale identification of protein histidine methylation in human cells.
PMID:34046594
Environmentally relevant concentrations of titanium dioxide nanoparticles pose negligible risk to marine microbes.
PMID:34046180
Comparative Analysis of Bursaphelenchus xylophilus Secretome Under Pinus pinaster and P. pinea Stimuli.
PMID:34046053
Screening of Key Proteins Affecting Floral Initiation of Saffron Under Cold Stress Using iTRAQ-Based Proteomics.
PMID:34046047
Computational Biology and Machine Learning Approaches to Understand Mechanistic Microbiome-Host Interactions.
PMID:34046017
A Compendium of Murine (Phospho)Peptides Encompassing Different Isobaric Labeling and Data Acquisition Strategies.
PMID:34043369
Component Parts of Bacteriophage Virions Accurately Defined by a Machine-Learning Approach Built on Evolutionary Features.
PMID:34042467
Reciprocal Effect of Copper and Iron Regulation on the Proteome of Synechocystis sp. PCC 6803.
PMID:34041232
Constitutive Endocytosis of the Neuronal Glutamate Transporter Excitatory Amino Acid Transporter-3 Requires ARFGAP1.
PMID:34040545
A workflow to identify novel proteins based on the direct mapping of peptide-spectrum-matches to genomic locations.
PMID:34039272
p97/VCP inhibition causes excessive MRE11-dependent DNA end resection promoting cell killing after ionizing radiation.
PMID:34038735
LC-MS/MS analysis of lesional and normally looking psoriatic skin reveals significant changes in protein metabolism and RNA processing.
PMID:34038424
Regulation of aquaporin-4 expression in the central nervous system investigated using M23-AQP4 null mouse.
PMID:34038017
CLICK-enabled analogues reveal pregnenolone interactomes in cancer and immune cells.
PMID:34036248
A predictive model for vertebrate bone identification from collagen using proteomic mass spectrometry.
PMID:34035355
Cul3 regulates cytoskeleton protein homeostasis and cell migration during a critical window of brain development.
PMID:34031387
The dipeptide prolyl-hydroxyproline promotes cellular homeostasis and lamellipodia-driven motility via active β1-integrin in adult tendon cells.
PMID:34029590
The antiviral enzyme viperin inhibits cholesterol biosynthesis.
PMID:34029588
Proteins interacting with Leishmania major PUF1: A proteomic dataset.
PMID:34026959
The Universally Conserved ATPase YchF Regulates Translation of Leaderless mRNA in Response to Stress Conditions.
PMID:34026826
Proteome Analysis of PC12 Cells Reveals Alterations in Translation Regulation and Actin Signaling Induced by Clozapine.
PMID:34024016
Substrate specificities and reaction kinetics of the yeast oligosaccharyltransferase isoforms.
PMID:34023382
Quantitative proteomic comparison of salt stress in Chlamydomonas reinhardtii and the snow alga Chlamydomonas nivalis reveals mechanisms for salt-triggered fatty acid accumulation via reallocation of carbon resources.
PMID:34022944
Revealing the Dynamic Allosteric Changes Required for Formation of the Cysteine Synthase Complex by Hydrogen-Deuterium Exchange MS.
PMID:34022432
Overarching control of autophagy and DNA damage response by CHD6 revealed by modeling a rare human pathology.
PMID:34021162
Proteomic Screens for Suppressors of Anoikis Identify IL1RAP as a Promising Surface Target in Ewing Sarcoma.
PMID:34021002
Meta-omics Reveal Gallionellaceae and Rhodanobacter Species as Interdependent Key Players for Fe(II) Oxidation and Nitrate Reduction in the Autotrophic Enrichment Culture KS.
PMID:34020935
Deciphering the architecture and interactome of hnRNP proteins and enigmRBPs.
PMID:34017973
Quantitative Analysis of Tyrosine Phosphorylation from FFPE Tissues Reveals Patient-Specific Signaling Networks.
PMID:34016623
The structural heterogeneity of α-synuclein is governed by several distinct subpopulations with interconversion times slower than milliseconds.
PMID:34015255
BAD regulates mammary gland morphogenesis by 4E-BP1-mediated control of localized translation in mouse and human models.
PMID:34011960
Copy number aberrations drive kinase rewiring, leading to genetic vulnerabilities in cancer.
PMID:34010657
Dual roles of HSP70 chaperone HSPA1 in quality control of nascent and newly synthesized proteins.
PMID:34010456
CD8+ T cell landscape in Indigenous and non-Indigenous people restricted by influenza mortality-associated HLA-A*24:02 allomorph.
PMID:34006841
Repurposing of synaptonemal complex proteins for kinetochores in Kinetoplastida.
PMID:34006126
Mapping the SARS-CoV-2 spike glycoprotein-derived peptidome presented by HLA class II on dendritic cells.
PMID:34004174
Protein Composition and Associated Material Properties of Cobweb Spiders' Gumfoot Glue Droplets.
PMID:34003260
UCP1 governs liver extracellular succinate and inflammatory pathogenesis.
PMID:34002097
PRMT6 activates cyclin D1 expression in conjunction with the transcription factor LEF1.
PMID:34001852
Defective NET clearance contributes to sustained FXII activation in COVID-19-associated pulmonary thrombo-inflammation.
PMID:34000623
Increased Wheat Protein Content via Introgression of an HMW Glutenin Selectively Reshapes the Grain Proteome.
PMID:34000434
Cyr61 from adipose-derived stem cells promotes colorectal cancer metastasis and vasculogenic mimicry formation via integrin αV β5.
PMID:33999512
Impairment of the ER/mitochondria compartment in human cardiomyocytes with PLN p.Arg14del mutation.
PMID:33998164
-------A type I IFN, prothrombotic hyperinflammatory neutrophil signature is distinct for COVID-19 ARDS--.
PMID:33997298
A 9-kDa matricellular SPARC fragment released by cathepsin D exhibits pro-tumor activity in the triple-negative breast cancer microenvironment.
PMID:33995652
TALEN-Based HvMPK3 Knock-Out Attenuates Proteome and Root Hair Phenotypic Responses to flg22 in Barley.
PMID:33995462
Membrane-Enriched Proteomics Link Ribosome Accumulation and Proteome Reprogramming With Cold Acclimation in Barley Root Meristems.
PMID:33995454
Adipose Triglyceride Lipase Loss Promotes a Metabolic Switch in A549 Non-Small Cell Lung Cancer Cell Spheroids.
PMID:33992777
Comparing endocervical mucus proteome of humans and rhesus macaques.
PMID:33991406
Multimodality assessment of heart failure with preserved ejection fraction skeletal muscle reveals differences in the machinery of energy fuel metabolism.
PMID:33991175
The SARS-CoV-2 RNA interactome.
PMID:33989516
Unbiased Label-Free Quantitative Proteomics of Cells Expressing Amyotrophic Lateral Sclerosis (ALS) Mutations in CCNF Reveals Activation of the Apoptosis Pathway: A Workflow to Screen Pathogenic Gene Mutations.
PMID:33986643
IFI16 directly senses viral RNA and enhances RIG-I transcription and activation to restrict influenza virus infection.
PMID:33986530
Human DICER helicase domain recruits PKR and modulates its antiviral activity.
PMID:33984068
Multi-omics analysis of early leaf development in Arabidopsis thaliana.
PMID:33982025
NMD inhibition by 5-azacytidine augments presentation of immunogenic frameshift-derived neoepitopes.
PMID:33981976
Recruitment of toxin-like proteins with ancestral venom function supports endoparasitic lifestyles of Myxozoa.
PMID:33981497
Streptococcus suis Encodes Multiple Allelic Variants of a Phase-Variable Type III DNA Methyltransferase, ModS, That Control Distinct Phasevarions.
PMID:33980672
Elp2 mutations perturb the epitranscriptome and lead to a complex neurodevelopmental phenotype.
PMID:33976153
FUT8-mediated aberrant N-glycosylation of B7H3 suppresses the immune response in triple-negative breast cancer.
PMID:33976130
Proteomic and Transcriptomic Analysis of Microviridae φX174 Infection Reveals Broad Upregulation of Host Escherichia coli Membrane Damage and Heat Shock Responses.
PMID:33975962
The C-Mannosylome of Human Induced Pluripotent Stem Cells Implies a Role for ADAMTS16 C-Mannosylation in Eye Development.
PMID:33975020
hu.MAP 2.0: integration of over 15,000 proteomic experiments builds a global compendium of human multiprotein assemblies.
PMID:33973408
ARP-T1-associated Bazex-Dupré-Christol syndrome is an inherited basal cell cancer with ciliary defects characteristic of ciliopathies.
PMID:33972689
Genoppi is an open-source software for robust and standardized integration of proteomic and genetic data.
PMID:33972534
Cardio- and reno-protective effects of dipeptidyl peptidase III in diabetic mice.
PMID:33971198
Endolysosomal N-glycan processing is critical to attain the most active form of the enzyme acid alpha-glucosidase.
PMID:33971197
Isolation of the Buchnera aphidicola flagellum basal body complexes from the Buchnera membrane.
PMID:33970928
Interferon-induced degradation of the persistent hepatitis B virus cccDNA form depends on ISG20.
PMID:33969602
Recovery of Depleted miR-146a in ALS Cortical Astrocytes Reverts Cell Aberrancies and Prevents Paracrine Pathogenicity on Microglia and Motor Neurons.
PMID:33968923
NSMF promotes the replication stress-induced DNA damage response for genome maintenance.
PMID:33963872
Collagen fiber regulation in human pediatric aortic valve development and disease.
PMID:33963260
From integrative structural biology to cell biology.
PMID:33957123
The Serpin-like Loop Insertion of Ovalbumin Increases the Stability and Decreases the OVA 323-339 Epitope Processing Efficiency.
PMID:33956428
Mass Spectral Analysis of Synthetic Peptides: Implications in Proteomics.
PMID:33953644
The lncRNA Caren antagonizes heart failure by inactivating DNA damage response and activating mitochondrial biogenesis.
PMID:33953175
Mapping Angiotensin II Type 1 Receptor-Biased Signaling Using Proximity Labeling and Proteomics Identifies Diverse Actions of Biased Agonists.
PMID:33950683
A Semiautomated Paramagnetic Bead-Based Platform for Isobaric Tag Sample Preparation.
PMID:33950666
The Protein Data Bank Archive.
PMID:33950382
The iRhom homology domain is indispensable for ADAM17-mediated TNFα and EGF receptor ligand release.
PMID:33950315
Proteomics of resistance to Notch1 inhibition in acute lymphoblastic leukemia reveals targetable kinase signatures.
PMID:33947863
Structures of a non-ribosomal peptide synthetase condensation domain suggest the basis of substrate selectivity.
PMID:33947858
SIK2 orchestrates actin-dependent host response upon Salmonella infection.
PMID:33947818
The Zinc Finger Antiviral Protein ZAP Restricts Human Cytomegalovirus and Selectively Binds and Destabilizes Viral UL4/UL5 Transcripts.
PMID:33947766
SWATH Based Quantitative Proteomics Reveals Significant Lipid Metabolism in Early Myopic Guinea Pig Retina.
PMID:33946922
Immune-Associated Proteins Are Enriched in Lung Tissue-Derived Extracellular Vesicles during Allergen-Induced Eosinophilic Airway Inflammation.
PMID:33946872
Quantitative Label-Free Comparison of the Metabolic Protein Fraction in Old and Modern Italian Wheat Genotypes by a Shotgun Approach.
PMID:33946829
Protamine Characterization by Top-Down Proteomics: Boosting Proteoform Identification with DBSCAN.
PMID:33946530
Macrophage Proteome Analysis at Different Stages of Mycobacterium avium Subspecies paratuberculosis Infection Reveals a Mechanism of Pathogen Dissemination.
PMID:33946162
Longitudinal proteomic profiling provides insights into host response and proteome dynamics in COVID-19 progression.
PMID:33945677
Integrative analysis reveals unique structural and functional features of the Smc5/6 complex.
PMID:33941673
Defining the Caprin-1 Interactome in Unstressed and Stressed Conditions.
PMID:33939924
Detecting Protein Communities in Native Cell Extracts by Machine Learning: A Structural Biologist's Perspective.
PMID:33937337
Deletion of the ATP2 Gene in Candida albicans Blocks Its Escape From Macrophage Clearance.
PMID:33937095
Extracellular vesicles from monocyte/platelet aggregates modulate human atherosclerotic plaque reactivity.
PMID:33936566
Hepatic Cytochrome P450 Abundance and Activity in the Developing and Adult Göttingen Minipig: Pivotal Data for PBPK Modeling.
PMID:33935788
Proteome impact on maize silks under the priming state induced by Trichoderma root colonization.
PMID:33934226
The Cdk8 kinase module regulates interaction of the mediator complex with RNA polymerase II.
PMID:33933450
Autocatalytic activation of a malarial egress protease is druggable and requires a protein cofactor.
PMID:33932049
Proteogenomic landscape of uterine leiomyomas from hereditary leiomyomatosis and renal cell cancer patients.
PMID:33931688
Proteomic analysis of early-stage incompatible and compatible interactions between grapevine and P. viticola.
PMID:33931609
FMRP attenuates activity dependent modifications in the mitochondrial proteome.
PMID:33931071
Systemic sclerosis biomarkers detection in the secretome of TGFβ1-activated primary human lung fibroblasts.
PMID:33930553
TMTpro Complementary Ion Quantification Increases Plexing and Sensitivity for Accurate Multiplexed Proteomics at the MS2 Level.
PMID:33929851
Decrypting bacterial polyphenol metabolism in an anoxic wetland soil.
PMID:33927199
Chromatin-Directed Proteomics Identifies ZNF84 as a p53-Independent Regulator of p21 in Genotoxic Stress Response.
PMID:33925586
Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.
PMID:33925313
Proteomic Charting of Imipenem Adaptive Responses in a Highly Carbapenem Resistant Clinical Enterobacter roggenkampii Isolate.
PMID:33924830
Out-of-Field Hippocampus from Partial-Body Irradiated Mice Displays Changes in Multi-Omics Profile and Defects in Neurogenesis.
PMID:33924260
The Human 2-Cys Peroxiredoxins form Widespread, Cysteine-Dependent- and Isoform-Specific Protein-Protein Interactions.
PMID:33923941
Quantitative Proteomics Reveals the Dynamic Regulation of the Tomato Proteome in Response to Phytophthora infestans.
PMID:33920680
Mass Spectrometry Imaging as a Tool to Investigate Region Specific Lipid Alterations in Symptomatic Human Carotid Atherosclerotic Plaques.
PMID:33919525
Plant Extracellular Vesicles and Nanovesicles: Focus on Secondary Metabolites, Proteins and Lipids with Perspectives on Their Potential and Sources.
PMID:33918442
Chronically Elevated Exogenous Glucose Elicits Antipodal Effects on the Proteome Signature of Differentiating Human iPSC-Derived Pancreatic Progenitors.
PMID:33918250
Discovery of Post-Translational Modifications in Emiliania huxleyi.
PMID:33918234
Investigation of the Initial Host Response of Naïve Atlantic Salmon (Salmo salar) Inoculated with Paramoeba perurans.
PMID:33918228
Proteomic Characterization of Bacteriophage Peptides from the Mastitis Producer Staphylococcus aureus by LC-ESI-MS/MS and the Bacteriophage Phylogenomic Analysis.
PMID:33917943
Structural characterization of KKT4, an unconventional microtubule-binding kinetochore protein.
PMID:33915106
Modeling plasticity and dysplasia of pancreatic ductal organoids derived from human pluripotent stem cells.
PMID:33915078
Proteome-Wide Analysis of Heat-Stress in Pinus radiata Somatic Embryos Reveals a Combined Response of Sugar Metabolism and Translational Regulation Mechanisms.
PMID:33912202
Carbamazepine Induces Focused T Cell Responses in Resolved Stevens-Johnson Syndrome and Toxic Epidermal Necrolysis Cases But Does Not Perturb the Immunopeptidome for T Cell Recognition.
PMID:33912179
Identification of therapeutic targets of the hijacked super-enhancer complex in EVI1-rearranged leukemia.
PMID:33911178
PKR activity modulation by phosphomimetic mutations of serine residues located three aminoacids upstream of double-stranded RNA binding motifs.
PMID:33911136
Rapid and Accurate Detection of Aminoglycoside-Modifying Enzymes and 16S rRNA Methyltransferases by Targeted Liquid Chromatography-Tandem Mass Spectrometry.
PMID:33910961
Erosion of human X chromosome inactivation causes major remodeling of the iPSC proteome.
PMID:33910018
The final step of 40S ribosomal subunit maturation is controlled by a dual key lock.
PMID:33908345
Boosting Detection of Low-Abundance Proteins in Thermal Proteome Profiling Experiments by Addition of an Isobaric Trigger Channel to TMT Multiplexes.
PMID:33908254
The dominantly expressed class II molecule from a resistant MHC haplotype presents only a few Marek's disease virus peptides by using an unprecedented binding motif.
PMID:33901176
Prednisolone Alters Endometrial Decidual Cells and Affects Decidual-Trophoblast Interactions.
PMID:33898438
Proteome Profile of Myelin in the Zebrafish Brain.
PMID:33898427
Coelimycin Synthesis Activatory Proteins Are Key Regulators of Specialized Metabolism and Precursor Flux in Streptomyces coelicolor A3(2).
PMID:33897632
Proteomic profiling of soft tissue sarcomas with SWATH mass spectrometry.
PMID:33895336
SAR insights into TET2 catalytic domain inhibition: Synthesis of 2-Hydroxy-4-Methylene-pentanedicarboxylates.
PMID:33894507
Tolerance to nascent protein misfolding stress requires fine-tuning of the cAMP/PKA pathway.
PMID:33894203
RNase R is associated in a functional complex with the RhpA DEAD-box RNA helicase in Helicobacter pylori.
PMID:33893809
An integrated landscape of protein expression in human cancer.
PMID:33893311
Loss of enteric neuronal Ndrg4 promotes colorectal cancer via increased release of Nid1 and Fbln2.
PMID:33890711
Comparative Proteomics Reveals the Anaerobic Lifestyle of Meat-Spoiling Pseudomonas Species.
PMID:33889149
Pectin Induced Colony Expansion of Soil-Derived Flavobacterium Strains.
PMID:33889143
Increased expression of peptides from non-coding genes in cancer proteomics datasets suggests potential tumor neoantigens.
PMID:33888849
Smoothened transduces Hedgehog signals via activity-dependent sequestration of PKA catalytic subunits.
PMID:33886552
Growth factor profile in calcified cartilage from the metaphysis of a calf costochondral junction, the site of initial bone formation.
PMID:33884197
TPL-2 kinase induces phagosome acidification to promote macrophage killing of bacteria.
PMID:33881780
Protein expression plasticity contributes to heat and drought tolerance of date palm.
PMID:33880635
Optic atrophy-associated TMEM126A is an assembly factor for the ND4-module of mitochondrial complex I.
PMID:33879611
An alternative resource allocation strategy in the chemolithoautotrophic archaeon Methanococcus maripaludis.
PMID:33879571
AKT/AMPK-mediated phosphorylation of TBC1D4 disrupts the interaction with insulin-regulated aminopeptidase.
PMID:33872597
Flash Oxidation (FOX) System: A Novel Laser-Free Fast Photochemical Oxidation Protein Footprinting Platform.
PMID:33872496
Quantitative Proteomic Analysis in Alveolar Type II Cells Reveals the Different Capacities of RAS and TGF-β to Induce Epithelial-Mesenchymal Transition.
PMID:33869273
Proteomic analysis reveals key proteins involved in ethylene-induced adventitious root development in cucumber (Cucumis sativus L.).
PMID:33868797
SAGA and SAGA-like SLIK transcriptional coactivators are structurally and biochemically equivalent.
PMID:33864814
PCprophet: a framework for protein complex prediction and differential analysis using proteomic data.
PMID:33859439
A genome-wide atlas of co-essential modules assigns function to uncharacterized genes.
PMID:33859415
HLA Ligand Atlas: a benign reference of HLA-presented peptides to improve T-cell-based cancer immunotherapy.
PMID:33858848
DNAJC9 integrates heat shock molecular chaperones into the histone chaperone network.
PMID:33857403
GeenaR: A Web Tool for Reproducible MALDI-TOF Analysis.
PMID:33854526
Proteomics characterisation of the L929 cell supernatant and its role in BMDM differentiation.
PMID:33853969
The deubiquitinase TRABID stabilizes the K29/K48-specific E3 ubiquitin ligase HECTD1.
PMID:33853758
Loss of LUC7L2 and U1 snRNP subunits shifts energy metabolism from glycolysis to OXPHOS.
PMID:33852893
Triple SILAC identified progestin-independent and dependent PRA and PRB interacting partners in breast cancer.
PMID:33846359
Protein kinase A controls the hexosamine pathway by tuning the feedback inhibition of GFAT-1.
PMID:33846315
The landscape of molecular chaperones across human tissues reveals a layered architecture of core and variable chaperones.
PMID:33846299
Multilevel proteomics reveals host perturbations by SARS-CoV-2 and SARS-CoV.
PMID:33845483
Sensitive Immunopeptidomics by Leveraging Available Large-Scale Multi-HLA Spectral Libraries, Data-Independent Acquisition, and MS/MS Prediction.
PMID:33845167
Sickle Cell Trait Modulates the Proteome and Phosphoproteome of Plasmodium falciparum-Infected Erythrocytes.
PMID:33842387
Dermatopontin as a potential pathogenic factor in endometrial cancer.
PMID:33841569
HIV-1 exposure promotes PKG1-mediated phosphorylation and degradation of stathmin to increase epithelial barrier permeability.
PMID:33839152
Coding and non-coding roles of MOCCI (C15ORF48) coordinate to regulate host inflammation and immunity.
PMID:33837217
Histone deacetylases control lysine acetylation of ribosomal proteins in rice.
PMID:33836077
Centrosome-mediated microtubule remodeling during axon formation in human iPSC-derived neurons.
PMID:33835529
Trypanosome KKIP1 Dynamically Links the Inner Kinetochore to a Kinetoplastid Outer Kinetochore Complex.
PMID:33834005
Proteomic comparison between different tissue preservation methods for identification of promising biomarkers of urothelial bladder cancer.
PMID:33828141
A Superfamily-wide Activity Atlas of Serine Hydrolases in Drosophila melanogaster.
PMID:33827210
Insight into the human pathodegradome of the V8 protease from Staphylococcus aureus.
PMID:33826899
iTRAQ-based proteome profiling revealed the role of Phytochrome A in regulating primary metabolism in tomato seedling.
PMID:33824368
Hypoxia drives murine neutrophil protein scavenging to maintain central carbon metabolism.
PMID:33822765
Potential Role of Epithelial Endoplasmic Reticulum Stress and Anterior Gradient Protein 2 Homologue in Crohn's Disease Fibrosis.
PMID:33822017
Physiological Responses of Aspergillus niger Challenged with Itraconazole.
PMID:33820768
In vivo N-Terminomics Highlights Novel Functions of ADAMTS2 and ADAMTS14 in Skin Collagen Matrix Building.
PMID:33816558
Structural and Functional Characterization of Fibronectin in Extracellular Vesicles From Hepatocytes.
PMID:33816490
Comprehensive Proteomic Characterization of the Pectoralis Major at Three Chronological Ages in Beijing-You Chicken.
PMID:33815156
Targeted Quantification of Detergent-Insoluble RNA-Binding Proteins in Human Brain Reveals Stage and Disease Specific Co-aggregation in Alzheimer's Disease.
PMID:33815056
Fabrication, Rheological, and Compositional Characterization of Thermoresponsive Hydrogel from Cornea.
PMID:33813860
Structure-activity relationship of ipglycermide binding to phosphoglycerate mutases.
PMID:33812994
Integrative Proteomic and Metabolomic Analysis Reveals Metabolic Phenotype in Mice With Cardiac-Specific Deletion of Natriuretic Peptide Receptor A.
PMID:33812089
Resourcing, annotating, and analysing synthetic peptides of SARS-CoV-2 for immunopeptidomics and other immunological studies.
PMID:33811468
Trastuzumab Modulates the Protein Cargo of Extracellular Vesicles Released by ERBB2+ Breast Cancer Cells.
PMID:33809102
Characterization of NADPH Oxidase Expression and Activity in Acute Myeloid Leukemia Cell Lines: A Correlation with the Differentiation Status.
PMID:33807114
Persistent Inflammatory Stimulation Drives the Conversion of MSCs to Inflammatory CAFs That Promote Pro-Metastatic Characteristics in Breast Cancer Cells.
PMID:33806906
Calendula officinalis Triterpenoid Saponins Impact the Immune Recognition of Proteins in Parasitic Nematodes.
PMID:33806494
Functional States in Tumor-Initiating Cell Differentiation in Human Colorectal Cancer.
PMID:33806447
Site-Specific O-Glycosylation Analysis of SARS-CoV-2 Spike Protein Produced in Insect and Human Cells.
PMID:33806155
Corynebacterium diphtheriae Proteome Adaptation to Cell Culture Medium and Serum.
PMID:33805816
A Workflow towards the Reproducible Identification and Quantitation of Protein Carbonylation Sites in Human Plasma.
PMID:33804523
Ferlins and TgDOC2 in Toxoplasma Microneme, Rhoptry and Dense Granule Secretion.
PMID:33803212
Proteomics Data Analysis for the Identification of Proteins and Derived Proteotypic Peptides of Potential Use as Putative Drought Tolerance Markers for Quercus ilex.
PMID:33800973
Mast Cell-Derived SAMD14 Is a Novel Regulator of the Human Prostate Tumor Microenvironment.
PMID:33799802
Discovery of RSV-Induced BRD4 Protein Interactions Using Native Immunoprecipitation and Parallel Accumulation-Serial Fragmentation (PASEF) Mass Spectrometry.
PMID:33799525
Identification of Ku70 Domain-Specific Interactors Using BioID2.
PMID:33799447
Iron Deficiency and Recovery in Yeast: A Quantitative Proteomics Approach.
PMID:33797912
Combining P and Zn fertilization to enhance yield and grain quality in maize grown on Mediterranean soils.
PMID:33795774
A KRAS-responsive long non-coding RNA controls microRNA processing.
PMID:33795683
Human OMICs and Computational Biology Research in Africa: Current Challenges and Prospects.
PMID:33794662
Identification of disease-promoting stromal components by comparative proteomic and transcriptomic profiling of canine mammary tumors using laser-capture microdissected FFPE tissue.
PMID:33794398
Protein and Signaling Pathway Responses to rhIL-6 Intervention Before Lobaplatin Treatment in Osteosarcoma Cells.
PMID:33791202
Integral Use of Immunopeptidomics and Immunoinformatics for the Characterization of Antigen Presentation and Rational Identification of BoLA-DR-Presented Peptides and Epitopes.
PMID:33789985
Precise regulation of the relative rates of surface area and volume synthesis in bacterial cells growing in dynamic environments.
PMID:33785742
ADAM10-Mediated Ectodomain Shedding Is an Essential Driver of Podocyte Damage.
PMID:33785583
Quantitative acetylome analysis reveals histone modifications that may predict prognosis in hepatitis B-related hepatocellular carcinoma.
PMID:33783990
Structural and functional analysis of LIM domain-dependent recruitment of paxillin to αvβ3 integrin-positive focal adhesions.
PMID:33782527
Heat-Treatments Affect Protease Activities and Peptide Profiles of Ruminants' Milk.
PMID:33777990
EGF Induces Migration Independent of EMT or Invasion in A549 Lung Adenocarcinoma Cells.
PMID:33777943
SP3 Protocol for Proteomic Plant Sample Preparation Prior LC-MS/MS.
PMID:33777071
The Contact Allergen NiSO4 Triggers a Distinct Molecular Response in Primary Human Dendritic Cells Compared to Bacterial LPS.
PMID:33777040
Proteomics characterization of mitochondrial-derived vesicles under oxidative stress.
PMID:33769614
Ultra-fast proteomics with Scanning SWATH.
PMID:33767396
Comparative proteomic profiling of newly acquired, virulent and attenuated Neoparamoeba perurans proteins associated with amoebic gill disease.
PMID:33767232
An updated map of Trypanosoma cruzi histone post-translational modifications.
PMID:33767201
Biogeographic venom variation in Russell's viper (Daboia russelii) and the preclinical inefficacy of antivenom therapy in snakebite hotspots.
PMID:33764996
PI3Kδ Forms Distinct Multiprotein Complexes at the TCR Signalosome in Naïve and Differentiated CD4+ T Cells.
PMID:33763075
Protein cleavage influences surface protein presentation in Mycoplasma pneumoniae.
PMID:33762641
Ca2+ signals critical for egress and gametogenesis in malaria parasites depend on a multipass membrane protein that interacts with PKG.
PMID:33762339
The COVIDome Explorer Researcher Portal.
PMID:33758879
Coagulation factor IX analysis in bioreactor cell culture supernatant predicts quality of the purified product.
PMID:33758337
Long-term evolution of the epithelial cell secretome in preclinical 3D models of the human bronchial epithelium.
PMID:33758289
Palaeoproteomics confirm earliest domesticated sheep in southern Africa ca. 2000 BP.
PMID:33758223
Whole-Genome Transformation Promotes tRNA Anticodon Suppressor Mutations under Stress.
PMID:33758086
Integrated Redox Proteomic Analysis Highlights New Mechanisms of Sensitivity to Silver Nanoparticles.
PMID:33757833
Multi-omics integration identifies key upstream regulators of pathomechanisms in hypertrophic cardiomyopathy due to truncating MYBPC3 mutations.
PMID:33757590
GMPPA defects cause a neuromuscular disorder with α-dystroglycan hyperglycosylation.
PMID:33755596
Mesh Fragmentation Improves Dissociation Efficiency in Top-down Proteomics.
PMID:33754701
LncRNA PRADX-mediated recruitment of PRC2/DDX5 complex suppresses UBXN1 expression and activates NF-κB activity, promoting tumorigenesis.
PMID:33754075
Assembly of a dsRNA synthesizing complex: RNA-DEPENDENT RNA POLYMERASE 2 contacts the largest subunit of NUCLEAR RNA POLYMERASE IV.
PMID:33753485
Human Corneal Epithelial Cells Internalize Aspergillus flavus Spores by Actin-Mediated Endocytosis.
PMID:33753415
Comparative Analysis of Outer Membrane Vesicle Isolation Methods With an Escherichia coli tolA Mutant Reveals a Hypervesiculating Phenotype With Outer-Inner Membrane Vesicle Content.
PMID:33746922
Global Profiling of the Lysine Crotonylome in Different Pluripotent States.
PMID:33746086
MKRN3-mediated ubiquitination of Poly(A)-binding proteins modulates the stability and translation of GNRH1 mRNA in mammalian puberty.
PMID:33744966
Glucocorticoid receptor Thr524 phosphorylation by MINK1 induces interactions with 14-3-3 protein regulators.
PMID:33744286
Cooperative treatment effectiveness of ATR and HSP90 inhibition in Ewing's sarcoma cells.
PMID:33743824
A combinatorial action of GmMYB176 and GmbZIP5 controls isoflavonoid biosynthesis in soybean (Glycine max).
PMID:33742087
Red blood cell mannoses as phagocytic ligands mediating both sickle cell anaemia and malaria resistance.
PMID:33741926
Exposure to 1-Butanol Exemplifies the Response of the Thermoacidophilic Archaeon Sulfolobus acidocaldarius to Solvent Stress.
PMID:33741627
Influence of Proteome Profiles and Intracellular Drug Exposure on Differences in CYP Activity in Donor-Matched Human Liver Microsomes and Hepatocytes.
PMID:33739838
Cell Surface Processing of CD109 by Meprin β Leads to the Release of Soluble Fragments and Reduced Expression on Extracellular Vesicles.
PMID:33738281
Global miRNA/proteomic analyses identify miRNAs at 14q32 and 3p21, which contribute to features of chronic iron-exposed fallopian tube epithelial cells.
PMID:33737539
MARCKS affects cell motility and response to BTK inhibitors in CLL.
PMID:33735912
Proteomic identification of the UDP-GlcNAc: PI α1-6 GlcNAc-transferase subunits of the glycosylphosphatidylinositol biosynthetic pathway of Trypanosoma brucei.
PMID:33735232
Sex-Related Differences in Protein Expression in Sarcomere Mutation-Positive Hypertrophic Cardiomyopathy.
PMID:33732734
α-Catenin levels determine direction of YAP/TAZ response to autophagy perturbation.
PMID:33731717
Staphylococcus aureus Responds to Physiologically Relevant Temperature Changes by Altering Its Global Transcript and Protein Profile.
PMID:33731473
LMTK3 inhibition affects microtubule stability.
PMID:33731143
Excision of mutagenic replication-blocking lesions suppresses cancer but promotes cytotoxicity and lethality in nitrosamine-exposed mice.
PMID:33730582
MANTI: Automated Annotation of Protein N-Termini for Rapid Interpretation of N-Terminome Data Sets.
PMID:33729755
Data-independent acquisition-based proteome and phosphoproteome profiling across six melanoma cell lines reveals determinants of proteotypes.
PMID:33728422
Mapping specificity, cleavage entropy, allosteric changes and substrates of blood proteases in a high-throughput screen.
PMID:33727531
Dysregulation of Principal Cell miRNAs Facilitates Epigenetic Regulation of AQP2 and Results in Nephrogenic Diabetes Insipidus.
PMID:33727367
SARS-CoV-2 vaccine ChAdOx1 nCoV-19 infection of human cell lines reveals low levels of viral backbone gene transcription alongside very high levels of SARS-CoV-2 S glycoprotein gene transcription.
PMID:33722288
Estimating the number of protein molecules in a plant cell: protein and amino acid homeostasis during drought.
PMID:33721903
RNF111-facilitated neddylation potentiates cGAS-mediated antiviral innate immune response.
PMID:33720974
The velvet protein Vel1 controls initial plant root colonization and conidia formation for xylem distribution in Verticillium wilt.
PMID:33720931
Faecal proteomics as a novel method to study mammalian behaviour and physiology.
PMID:33720532
Quantifying absolute gene expression profiles reveals distinct regulation of central carbon metabolism genes in yeast.
PMID:33720010
Extracellular Vesicles Derived From Adult and Fetal Bone Marrow Mesenchymal Stromal Cells Differentially Promote ex vivo Expansion of Hematopoietic Stem and Progenitor Cells.
PMID:33718342
ABPP-HT - High-Throughput Activity-Based Profiling of Deubiquitylating Enzyme Inhibitors in a Cellular Context.
PMID:33718328
Proteomic profiling of commercial dust mite skin prick test solutions and allergy vaccines from India.
PMID:33717396
Dietary Inclusion of Black Soldier Fly (Hermetia Illucens) Larvae Meal and Paste Improved Gut Health but Had Minor Effects on Skin Mucus Proteome and Immune Response in Atlantic Salmon (Salmo Salar).
PMID:33717079
Quantitative Proteomics Reveals that the OGT Interactome Is Remodeled in Response to Oxidative Stress.
PMID:33716169
Possible role of small secreted peptides (SSPs) in immune signaling in bryophytes.
PMID:33713297
Loss-of-function mutations in the histone methyltransferase EZH2 promote chemotherapy resistance in AML.
PMID:33712646
An ARF GTPase module promoting invasion and metastasis through regulating phosphoinositide metabolism.
PMID:33712589
Data Management of Sensitive Human Proteomics Data: Current Practices, Recommendations, and Perspectives for the Future.
PMID:33711481
The GORKY glycoalkaloid transporter is indispensable for preventing tomato bitterness.
PMID:33707737
SIRT3 consolidates heterochromatin and counteracts senescence.
PMID:33706382
Maternal Iron Deficiency Modulates Placental Transcriptome and Proteome in Mid-Gestation of Mouse Pregnancy.
PMID:33693820
Human METTL18 is a histidine-specific methyltransferase that targets RPL3 and affects ribosome biogenesis and function.
PMID:33693809
Personalized Profiling Reveals Donor- and Lactation-Specific Trends in the Human Milk Proteome and Peptidome.
PMID:33693758
Multiple unbiased approaches identify oxidosqualene cyclase as the molecular target of a promising anti-leishmanial.
PMID:33691122
Qualitative and Quantitative Shotgun Proteomics Data Analysis from Data-Dependent Acquisition Mass Spectrometry.
PMID:33687723
Target protein deglycosylation in living cells by a nanobody-fused split O-GlcNAcase.
PMID:33686291
riboCIRC: a comprehensive database of translatable circRNAs.
PMID:33685493
Identification of permissive amber suppression sites for efficient non-canonical amino acid incorporation in mammalian cells.
PMID:33684219
Aggressiveness and Metastatic Potential of Breast Cancer Cells Co-Cultured with Preadipocytes and Exposed to an Environmental Pollutant Dioxin: An in Vitro and in Vivo Zebrafish Study.
PMID:33683140
Human Bone Proteomes before and after Decomposition: Investigating the Effects of Biological Variation and Taphonomic Alteration on Bone Protein Profiles and the Implications for Forensic Proteomics.
PMID:33683123
HDAC Inhibition Reverses Preexisting Diastolic Dysfunction and Blocks Covert Extracellular Matrix Remodeling.
PMID:33682427
Evidences for a Nutritional Role of Iodine in Plants.
PMID:33679830
Tolerogenic Effect Elicited by Protein Fraction Derived From Different Formulas for Dietary Treatment of Cow's Milk Allergy in Human Cells.
PMID:33679694
Host-interactor screens of Phytophthora infestans RXLR proteins reveal vesicle trafficking as a major effector-targeted process.
PMID:33677602
Nucleolin acts as the receptor for C1QTNF4 and supports C1QTNF4-mediated innate immunity modulation.
PMID:33676896
The phosphorylation of the Smad2/3 linker region by nemo-like kinase regulates TGF-β signaling.
PMID:33676893
A long isoform of GIV/Girdin contains a PDZ-binding module that regulates localization and G-protein binding.
PMID:33675748
Comparison of plasma and cerebrospinal fluid proteomes identifies gene products guiding adult neurogenesis and neural differentiation in birds.
PMID:33674647
Proteomic Analysis of Low-Grade, Early-Stage Endometrial Carcinoma Reveals New Dysregulated Pathways Associated with Cell Death and Cell Signaling.
PMID:33672863
IQGAP1 Is a Scaffold of the Core Proteins of the Hippo Pathway and Negatively Regulates the Pro-Apoptotic Signal Mediated by This Pathway.
PMID:33672268
Mycobacterium tuberculosis Small RNA MTS1338 Confers Pathogenic Properties to Non-Pathogenic Mycobacterium smegmatis.
PMID:33671144
Mass Spectrometry-Based Redox and Protein Profiling of Failing Human Hearts.
PMID:33670142
Major Determinants of Airway Epithelial Cell Sensitivity to S. aureus Alpha-Toxin: Disposal of Toxin Heptamers by Extracellular Vesicle Formation and Lysosomal Degradation.
PMID:33668237
Characterization of 150 Wheat Cultivars by LC-MS-Based Label-Free Quantitative Proteomics Unravels Possibilities to Design Wheat Better for Baking Quality and Human Health.
PMID:33668233
Potential Neuroprotective Mechanisms of Methamphetamine Treatment in Traumatic Brain Injury Defined by Large-Scale IonStar-Based Quantitative Proteomics.
PMID:33668155
Regulation of the endocytosis and prion-chaperoning machineries by yeast E3 ubiquitin ligase Rsp5 as revealed by orthogonal ubiquitin transfer.
PMID:33667410
A comprehensive dataset of the extra virgin olive oil (EVOO) proteome.
PMID:33665245
Neuropathy-causing TRPV4 mutations disrupt TRPV4-RhoA interactions and impair neurite extension.
PMID:33664271
Triqler for MaxQuant: Enhancing Results from MaxQuant by Bayesian Error Propagation and Integration.
PMID:33661646
Disease-related mutations in PI3Kγ disrupt regulatory C-terminal dynamics and reveal a path to selective inhibitors.
PMID:33661099
Defining a novel domain that provides an essential contribution to site-specific interaction of Rep protein with DNA.
PMID:33660784
Allergenicity assessment of Delonix regia pollen grain and identification of allergens by immunoproteomic approach.
PMID:33659721
RawBeans: A Simple, Vendor-Independent, Raw-Data Quality-Control Tool.
PMID:33657803
In Stallion Spermatozoa, Superoxide Dismutase (Cu-Zn) (SOD1) and the Aldo-Keto-Reductase Family 1 Member b (AKR1B1) Are the Proteins Most Significantly Reduced by Cryopreservation.
PMID:33656888
OXPHOS deficiency activates global adaptation pathways to maintain mitochondrial membrane potential.
PMID:33655635
The proximal proteome of 17 SARS-CoV-2 proteins links to disrupted antiviral signaling and host translation.
PMID:33655243
Capillary Zone Electrophoresis-Tandem Mass Spectrometry As an Alternative to Liquid Chromatography-Tandem Mass Spectrometry for Top-down Proteomics of Histones.
PMID:33650845
Sec24C is an HIV-1 host dependency factor crucial for virus replication.
PMID:33649557
Changing expression patterns of TonB-dependent transporters suggest shifts in polysaccharide consumption over the course of a spring phytoplankton bloom.
PMID:33649555
Evidence for the Mycobacterial Mce4 Transporter Being a Multiprotein Complex.
PMID:33649150
Oryza sativa cv. Nipponbare and Oryza barthii as Unexpected Tolerance and Susceptibility Sources Against Schizotetranychus oryzae (Acari: Tetranychidae) Mite Infestation.
PMID:33643348
Mitochondrial Small Heat Shock Proteins Are Essential for Normal Growth of Arabidopsis thaliana.
PMID:33643342
Stable Isotope Labeling of Amino Acids in Flies (SILAF) Reveals Differential Phosphorylation of Mitochondrial Proteins Upon Loss of OXPHOS Subunits.
PMID:33640490
A CSB-PAF1C axis restores processive transcription elongation after DNA damage repair.
PMID:33637760
The TUTase URT1 connects decapping activators and prevents the accumulation of excessively deadenylated mRNAs to avoid siRNA biogenesis.
PMID:33637717
mTORC1 activity is supported by spatial association with focal adhesions.
PMID:33635313
BRCA2 promotes DNA-RNA hybrid resolution by DDX5 helicase at DNA breaks to facilitate their repair‡.
PMID:33634895
Transcriptional and Proteomic Characterization of Telomere-Induced Senescence in a Human Alveolar Epithelial Cell Line.
PMID:33634147
A methodology for carbamate post-translational modification discovery and its application in Escherichia coli.
PMID:33633830
An aspartyl protease-mediated cleavage regulates structure and function of a flavodoxin-like protein and aids oxidative stress survival.
PMID:33630938
Categorization of Phosphorylation Site Behavior during the Diauxic Shift in Saccharomyces cerevisiae.
PMID:33630598
Formation and characterization of biofilms formed by salt-tolerant yeast strains in seawater-based growth medium.
PMID:33630153
A multifaceted analysis reveals two distinct phases of chloroplast biogenesis during de-etiolation in Arabidopsis.
PMID:33629953
Comparative Cell Surface Proteomic Analysis of the Primary Human T Cell and Monocyte Responses to Type I Interferon.
PMID:33628210
Sulfur sequestration promotes multicellularity during nutrient limitation.
PMID:33627869
Interaction of 7SK with the Smn complex modulates snRNP production.
PMID:33627647
TET2 is a component of the estrogen receptor complex and controls 5mC to 5hmC conversion at estrogen receptor cis-regulatory regions.
PMID:33626359
The lytic polysaccharide monooxygenase CbpD promotes Pseudomonas aeruginosa virulence in systemic infection.
PMID:33623002
Intracellular pathways for lignin catabolism in white-rot fungi.
PMID:33622792
The spatial network of skeletal proteins in a stony coral.
PMID:33622149
A meet-up of two second messengers: the c-di-AMP receptor DarB controls (p)ppGpp synthesis in Bacillus subtilis.
PMID:33619274
Therapeutic Assessment of Targeting ASNS Combined with l-Asparaginase Treatment in Solid Tumors and Investigation of Resistance Mechanisms.
PMID:33615182
A New Family of Bacteriolytic Proteins in Dictyostelium discoideum.
PMID:33614529
Proteomic profile of melanoma cell-derived small extracellular vesicles in patients' plasma: a potential correlate of melanoma progression.
PMID:33613873
A Multi-OMICs Approach Sheds Light on the Higher Yield Phenotype and Enhanced Abiotic Stress Tolerance in Tobacco Lines Expressing the Carrot lycopene β-cyclase1 Gene.
PMID:33613605
Light Regulates the Cytokinin-Dependent Cold Stress Responses in Arabidopsis.
PMID:33613584
Bacterial ClpP Protease Is a Potential Target for Methyl Gallate.
PMID:33613462
Deep learning the collisional cross sections of the peptide universe from a million experimental values.
PMID:33608539
20S proteasomes secreted by the malaria parasite promote its growth.
PMID:33608523
The one-carbon pool controls mitochondrial energy metabolism via complex I and iron-sulfur clusters.
PMID:33608280
SUGAR-seq enables simultaneous detection of glycans, epitopes, and the transcriptome in single cells.
PMID:33608275
Phloem Sap Proteins Are Part of a Core Stress Responsive Proteome Involved in Drought Stress Adjustment.
PMID:33603764
CSF proteome in multiple sclerosis subtypes related to brain lesion transcriptomes.
PMID:33603109
Discovery and validation of FBLN1 and ANT3 as potential biomarkers for early detection of cervical cancer.
PMID:33602229
Loss of α-actinin-3 during human evolution provides superior cold resilience and muscle heat generation.
PMID:33600773
Comprehensive Succinylome Profiling Reveals the Pivotal Role of Lysine Succinylation in Energy Metabolism and Quorum Sensing of Staphylococcus epidermidis.
PMID:33597936
The ER protein Ema19 facilitates the degradation of nonimported mitochondrial precursor proteins.
PMID:33596095
Overexpression of vesicle-associated membrane protein PttVAP27-17 as a tool to improve biomass production and the overall saccharification yields in Populus trees.
PMID:33593413
CIITA-Transduced Glioblastoma Cells Uncover a Rich Repertoire of Clinically Relevant Tumor-Associated HLA-II Antigens.
PMID:33592498
Nucleotide sugar biosynthesis occurs in the glycosomes of procyclic and bloodstream form Trypanosoma brucei.
PMID:33592041
Proximity proteomics in a marine diatom reveals a putative cell surface-to-chloroplast iron trafficking pathway.
PMID:33591270
Identification of novel lipid droplet factors that regulate lipophagy and cholesterol efflux in macrophage foam cells.
PMID:33590792
Implementing FAIR data management within the German Network for Bioinformatics Infrastructure (de.NBI) exemplified by selected use cases.
PMID:33589928
Proteome-wide and matrisome-specific alterations during human pancreas development and maturation.
PMID:33589611
Characterization of the novel mitochondrial genome segregation factor TAP110 in Trypanosoma brucei.
PMID:33589495
Physiological and proteomic profiles of Trypanosoma brucei rhodesiense parasite isolated from suramin responsive and non-responsive HAT patients in Busoga, Uganda.
PMID:33588295
Large-scale identification of ubiquitination sites on membrane-associated proteins in Arabidopsis thaliana seedlings.
PMID:33585938
Multi-Omics Driven Metabolic Network Reconstruction and Analysis of Lignocellulosic Carbon Utilization in Rhodosporidium toruloides.
PMID:33585414
Rapid Degradation Pathways of Host Proteins During HCMV Infection Revealed by Quantitative Proteomics.
PMID:33585265
Integrated Glycoproteomics Identifies a Role of N-Glycosylation and Galectin-1 on Myogenesis and Muscle Development.
PMID:33583770
Protein Phosphorylation in Depolarized Synaptosomes: Dissecting Primary Effects of Calcium from Synaptic Vesicle Cycling.
PMID:33582301
N-Glycomic Signature of Stage II Colorectal Cancer and Its Association With the Tumor Microenvironment.
PMID:33581319
Selenium-dependent metabolic reprogramming during inflammation and resolution.
PMID:33581115
PRMT5 inhibition disrupts splicing and stemness in glioblastoma.
PMID:33579912
Identification of new proteins related with cisplatin resistance in Saccharomyces cerevisiae.
PMID:33576883
The UBA domain of conjugating enzyme Ubc1/Ube2K facilitates assembly of K48/K63-branched ubiquitin chains.
PMID:33576509
Novel Insights into Quantitative Proteomics from an Innovative Bottom-Up Simple Light Isotope Metabolic (bSLIM) Labeling Data Processing Strategy.
PMID:33573382
Label-Free Quantitative Phosphoproteomics of the Fission Yeast Schizosaccharomyces pombe Using Strong Anion Exchange- and Porous Graphitic Carbon-Based Fractionation Strategies.
PMID:33572424
Global mapping of protein-metabolite interactions in Saccharomyces cerevisiae reveals that Ser-Leu dipeptide regulates phosphoglycerate kinase activity.
PMID:33568709
USP11 mediates repair of DNA-protein cross-links by deubiquitinating SPRTN metalloprotease.
PMID:33567341
TRIM67 regulates exocytic mode and neuronal morphogenesis via SNAP47.
PMID:33567284
Major antigen and paramyosin proteins as candidate biomarkers for serodiagnosis of canine infection by zoonotic Onchocerca lupi.
PMID:33566799
Sperm proteins and cancer-testis antigens are released by the seminiferous tubules in mice and men.
PMID:33565176
The methyltransferase METTL9 mediates pervasive 1-methylhistidine modification in mammalian proteomes.
PMID:33563959
A Grad-seq View of RNA and Protein Complexes in Pseudomonas aeruginosa under Standard and Bacteriophage Predation Conditions.
PMID:33563827
Simplified and Unified Access to Cancer Proteogenomic Data.
PMID:33560848
Cross-linking mass spectrometry uncovers protein interactions and functional assemblies in synaptic vesicle membranes.
PMID:33558502
SPRTN protease-cleaved MRE11 decreases DNA repair and radiosensitises cancer cells.
PMID:33558481
Proteo-Genomic Analysis of SARS-CoV-2: A Clinical Landscape of Single-Nucleotide Polymorphisms, COVID-19 Proteome, and Host Responses.
PMID:33555895
Comprehensive Analysis of Tryptic Peptides Arising from Disulfide Linkages in NISTmAb and Their Use for Developing a Mass Spectral Library.
PMID:33555887
Comprehensive Analysis of C. glutamicum Anaplerotic Deletion Mutants Under Defined d-Glucose Conditions.
PMID:33553115
Transcriptomic and Proteomic Analyses of Nepenthes ampullaria and Nepenthes rafflesiana Reveal Parental Molecular Expression in the Pitchers of Their Hybrid, Nepenthes × hookeriana.
PMID:33552113
Spatiotemporal processing of neural cell adhesion molecules 1 and 2 by BACE1 in vivo.
PMID:33548223
N-linked glycosylation enzymes in the diatom Thalassiosira oceanica exhibit a diel cycle in transcript abundance and favor for NXT-type sites.
PMID:33547363
Enforced dimerization between XBP1s and ATF6f enhances the protective effects of the UPR in models of neurodegeneration.
PMID:33545358
Escherichia coli FabG 3-ketoacyl-ACP reductase proteins lacking the assigned catalytic triad residues are active enzymes.
PMID:33545175
Yeast- and antibody-based tools for studying tryptophan C-mannosylation.
PMID:33542533
Structural studies of RNase M5 reveal two-metal-ion supported two-step dsRNA cleavage for 5S rRNA maturation.
PMID:33541205
The canine activated platelet secretome (CAPS): A translational model of thrombin-evoked platelet activation response.
PMID:33537530
Assessing technical and biological variation in SWATH-MS-based proteomic analysis of chronic lymphocytic leukaemia cells.
PMID:33536534
Neutrophil degranulation interconnects over-represented biological processes in atrial fibrillation.
PMID:33536523
Enrichment of Neurodegenerative Microglia Signature in Brain-Derived Extracellular Vesicles Isolated from Alzheimer's Disease Mouse Models.
PMID:33534581
BoxCarmax: A High-Selectivity Data-Independent Acquisition Mass Spectrometry Method for the Analysis of Protein Turnover and Complex Samples.
PMID:33533601
GmDNJ1, a type-I heat shock protein 40 (HSP40), is responsible for both Growth and heat tolerance in soybean.
PMID:33532690
Multiomics Analysis Provides Insight into the Laboratory Evolution of Escherichia coli toward the Metabolic Usage of Fluorinated Indoles.
PMID:33532571
Harnessing Machine Learning To Unravel Protein Degradation in Escherichia coli.
PMID:33531410
Targeted Quantification of the Lysosomal Proteome in Complex Samples.
PMID:33530589
The novel PII-interactor PirC identifies phosphoglycerate mutase as key control point of carbon storage metabolism in cyanobacteria.
PMID:33526690
Developmental synaptic regulator, TWEAK/Fn14 signaling, is a determinant of synaptic function in models of stroke and neurodegeneration.
PMID:33526652
SUMOylation regulates the protein network and chromatin accessibility at glucocorticoid receptor-binding sites.
PMID:33524141
The E3 ubiquitin ligase Cul4b promotes CD4+ T cell expansion by aiding the repair of damaged DNA.
PMID:33524014
Analysis of Human Faecal Host Proteins: Responsiveness to 10-Week Dietary Intervention Modifying Dietary Protein Intake in Elderly Males.
PMID:33521034
NeissLock provides an inducible protein anhydride for covalent targeting of endogenous proteins.
PMID:33514717
NODAL/TGFβ signalling mediates the self-sustained stemness induced by PIK3CAH1047R homozygosity in pluripotent stem cells.
PMID:33514588
LPS Tolerance Inhibits Cellular Respiration and Induces Global Changes in the Macrophage Secretome.
PMID:33513762
Over-Expression of Hypochlorite Inducible Major Facilitator Superfamily (MFS) Pumps Reduces Antimicrobial Drug Susceptibility by Increasing the Production of MexXY Mediated by ArmZ in Pseudomonas aeruginosa.
PMID:33510718
Arabidopsis REI-LIKE proteins activate ribosome biogenesis during cold acclimation.
PMID:33510206
Discovery of a small protein factor involved in the coordinated degradation of phycobilisomes in cyanobacteria.
PMID:33509926
A glycoengineered antigen exploiting a conserved protein O-glycosylation pathway in the Burkholderia genus for detection of glanders infections.
PMID:33509023
Novel Extracellular Electron Transfer Channels in a Gram-Positive Thermophilic Bacterium.
PMID:33505370
The Bloom syndrome complex senses RPA-coated single-stranded DNA to restart stalled replication forks.
PMID:33500419
High-pH reversed-phase fractionated neural retina proteome of normal growing C57BL/6 mouse.
PMID:33500412
Systematic Analysis of the Lysine Crotonylome and Multiple Posttranslational Modification Analysis (Acetylation, Succinylation, and Crotonylation) in Candida albicans.
PMID:33500332
Serine Biosynthesis Is a Metabolic Vulnerability in IDH2-Driven Breast Cancer Progression.
PMID:33500247
Disturbed intramitochondrial phosphatidic acid transport impairs cellular stress signaling.
PMID:33497623
An Alveolata secretory machinery adapted to parasite host cell invasion.
PMID:33495622
Pan-cancer analysis of transcripts encoding novel open-reading frames (nORFs) and their potential biological functions.
PMID:33495453
Drosophila Sex Peptide controls the assembly of lipid microcarriers in seminal fluid.
PMID:33495334
Does Proteomic Mirror Reflect Clinical Characteristics of Obesity?
PMID:33494491
Proteomics Analysis of Gastric Cancer Patients with Diabetes Mellitus.
PMID:33494396
The proteome of granulovacuolar degeneration and neurofibrillary tangles in Alzheimer's disease.
PMID:33492460
A proteome signature for acute incisional pain in dorsal root ganglia of mice.
PMID:33492035
MicroPOTS Analysis of Barrett's Esophageal Cell Line Models Identifies Proteomic Changes after Physiologic and Radiation Stress.
PMID:33491460
Characterization of Odontogenic Differentiation from Human Dental Pulp Stem Cells Using TMT-Based Proteomic Analysis.
PMID:33490242
A Hetero-Multimeric Chitinase-Containing Plasmodium falciparum and Plasmodium gallinaceum Ookinete-Secreted Protein Complex Involved in Mosquito Midgut Invasion.
PMID:33489941
Design and evaluation of synthetic bacterial consortia for optimized phenanthrene degradation through the integration of genomics and shotgun proteomics.
PMID:33489789
Long-read transcriptome sequencing reveals abundant promoter diversity in distinct molecular subtypes of gastric cancer.
PMID:33482911
Cross-compartment signal propagation in the mitotic exit network.
PMID:33481703
Integrative functional genomic analysis of intron retention in human and mouse brain with Alzheimer's disease.
PMID:33480174
Proteomics analysis of a human brain sample from a mucolipidosis type IV patient reveals pathophysiological pathways.
PMID:33478506
Isolation and Characterization of Equine Uterine Extracellular Vesicles: A Comparative Methodological Study.
PMID:33478136
A Wolf in Another Wolf's Clothing: Post-Genomic Regulation Dictates Venom Profiles of Medically-Important Cryptic Kraits in India.
PMID:33477742
Impact of WIN site inhibitor on the WDR5 interactome.
PMID:33472061
Multiplexed CuAAC Suzuki-Miyaura Labeling for Tandem Activity-Based Chemoproteomic Profiling.
PMID:33470097
Synthetic Siglec-9 Agonists Inhibit Neutrophil Activation Associated with COVID-19.
PMID:33469569
A Picture Worth a Thousand Molecules-Integrative Technologies for Mapping Subcellular Molecular Organization and Plasticity in Developing Circuits.
PMID:33469427
Chronic exposure of humans to high level natural background radiation leads to robust expression of protective stress response proteins.
PMID:33469066
Rab1-AMPylation by Legionella DrrA is allosterically activated by Rab1.
PMID:33469029
Staphylococcus aureus Trigger Factor Is Involved in Biofilm Formation and Cooperates with the Chaperone PpiB.
PMID:33468596
Use of Hybrid Data-Dependent and -Independent Acquisition Spectral Libraries Empowers Dual-Proteome Profiling.
PMID:33467856
Systemic Metabolic Alterations Correlate with Islet-Level Prostaglandin E2 Production and Signaling Mechanisms That Predict β-Cell Dysfunction in a Mouse Model of Type 2 Diabetes.
PMID:33467110
Impaired complex I repair causes recessive Leber's hereditary optic neuropathy.
PMID:33465056
Comparative evaluation of two methods for LC-MS/MS proteomic analysis of formalin fixed and paraffin embedded tissues.
PMID:33453434
Omics Analysis of Blood-Responsive Regulon in Bordetella pertussis Identifies a Novel Essential T3SS Substrate.
PMID:33450976
Proteome dynamics at broken replication forks reveal a distinct ATM-directed repair response suppressing DNA double-strand break ubiquitination.
PMID:33450211
SP3-FAIMS Chemoproteomics for High-Coverage Profiling of the Human Cysteinome*.
PMID:33442901
Biotin-Labelled Clavulanic Acid to Identify Proteins Target for Haptenation in Serum: Implications in Allergy Studies.
PMID:33442385
Pathophysiological subtypes of Alzheimer's disease based on cerebrospinal fluid proteomics.
PMID:33439986
Secretome Analysis of Clavibacter nebraskensis Strains Treated with Natural Xylem Sap In Vitro Predicts Involvement of Glycosyl Hydrolases and Proteases in Bacterial Aggressiveness.
PMID:33435483
Insights into synthesis and function of KsgA/Dim1-dependent rRNA modifications in archaea.
PMID:33434266
Comparative proteomics identifies Schlafen 5 (SLFN5) as a herpes simplex virus restriction factor that suppresses viral transcription.
PMID:33432153
Modulation of immune cell reactivity with cis-binding Siglec agonists.
PMID:33431669
Uncovering deeply conserved motif combinations in rapidly evolving noncoding sequences.
PMID:33430943
Proteomic and Functional Studies Reveal Detyrosinated Tubulin as Treatment Target in Sarcomere Mutation-Induced Hypertrophic Cardiomyopathy.
PMID:33430602
Colistin Dependence in Extensively Drug-Resistant Acinetobacter baumannii Strain Is Associated with ISAjo2 and ISAba13 Insertions and Multiple Cellular Responses.
PMID:33430070
Why Inclusion Matters for Alzheimer's Disease Biomarker Discovery in Plasma.
PMID:33427747
Streamlined copper defenses make Bordetella pertussis reliant on custom-made operon.
PMID:33420409
Mammalian cell proliferation requires noncatalytic functions of O-GlcNAc transferase.
PMID:33419956
Microbe-Mineral Interaction and Novel Proteins for Iron Oxide Mineral Reduction in the Hyperthermophilic Crenarchaeon Pyrodictium delaneyi.
PMID:33419739
Sex-dependent differences in the secretome of human endothelial cells.
PMID:33413676
Uncovering the secretome of mesenchymal stromal cells exposed to healthy, traumatic, and degenerative intervertebral discs: a proteomic analysis.
PMID:33413584
The active DNA-PK holoenzyme occupies a tensed state in a staggered synaptic complex.
PMID:33412091
Mass Spectrometry Spatial-Omics on a Single Conductive Slide.
PMID:33412004
Maize metabolome and proteome responses to controlled cold stress partly mimic early-sowing effects in the field and differ from those of Arabidopsis.
PMID:33410508
Dysregulation of phosphoproteins in hepatocellular carcinoma revealed via quantitative analysis of the phosphoproteome.
PMID:33408763
Proteome changes in pepper (Capsicum annuum L.) leaves induced by the green peach aphid (Myzus persicae Sulzer).
PMID:33407137
Bioinformatics: new tools and applications in life science and personalized medicine.
PMID:33404829
Carbon Catabolite Repression in Filamentous Fungi Is Regulated by Phosphorylation of the Transcription Factor CreA.
PMID:33402538
Disome-seq reveals widespread ribosome collisions that promote cotranslational protein folding.
PMID:33402206
Identification and Characterization of Plant-Interacting Targets of Tomato Spotted Wilt Virus Silencing Suppressor.
PMID:33401462
Arabidopsis mTERF9 protein promotes chloroplast ribosomal assembly and translation by establishing ribonucleoprotein interactions in vivo.
PMID:33398331
Cell surface thermal proteome profiling tracks perturbations and drug targets on the plasma membrane.
PMID:33398190
TDP-43 aggregation induced by oxidative stress causes global mitochondrial imbalance in ALS.
PMID:33398173
Spatiotemporal profiling of cytosolic signaling complexes in living cells by selective proximity proteomics.
PMID:33397984
Histone modifications during the life cycle of the brown alga Ectocarpus.
PMID:33397407
Proteomics of Muscle Microdialysates Identifies Potential Circulating Biomarkers in Facioscapulohumeral Muscular Dystrophy.
PMID:33396627
Transfection With Plasmid Causing Stable Expression of a Foreign Gene Affects General Proteome Pattern in Giardia lamblia Trophozoites.
PMID:33392107
Phosphoproteomics identify arachidonic-acid-regulated signal transduction pathways modulating macrophage functions with implications for ovarian cancer.
PMID:33391540
Identification of Critical Genes and Proteins for Stent Restenosis Induced by Esophageal Benign Hyperplasia in Esophageal Cancer.
PMID:33391336
Signal Recognition Particle RNA Contributes to Oxidative Stress Response in Deinococcus radiodurans by Modulating Catalase Localization.
PMID:33391243
A Fast, Efficient and Easy to Implement Method to Purify Bacterial Pili From Lacticaseibacillus rhamnosus GG Based on Multimodal Chromatography.
PMID:33391233
Transcriptomic and proteomic profiling revealed reprogramming of carbon metabolism in acetate-grown human pathogen Candida glabrata.
PMID:33388061
Proteomic Analysis of Pre-Invasive Serous Lesions of the Endometrium and Fallopian Tube Reveals Their Metastatic Potential.
PMID:33384952
The Proteomic Landscape of Resting and Activated CD4+ T Cells Reveal Insights into Cell Differentiation and Function.
PMID:33383959
Crosstalk between Long-Term Sublethal Oxidative Stress and Detrimental Inflammation as Potential Drivers for Age-Related Retinal Degeneration.
PMID:33383836
The gut bacterium Extibacter muris produces secondary bile acids and influences liver physiology in gnotobiotic mice.
PMID:33382950
Comparative proteomics provides insights into diapause program of Bactrocera minax (Diptera: Tephritidae).
PMID:33382763
Long-term transcriptomic and proteomic effects in Sprague Dawley rat thyroid and plasma after internal low dose 131I exposure.
PMID:33382739
SCF-Fbxo42 promotes synaptonemal complex assembly by downregulating PP2A-B56.
PMID:33382409
TrkC Is Essential for Nephron Function and Trans-Activates Igf1R Signaling.
PMID:33380522
USP15 Deubiquitinase Safeguards Hematopoiesis and Genome Integrity in Hematopoietic Stem Cells and Leukemia Cells.
PMID:33378683
Serum proteome-wide identified ATP citrate lyase as a novel informative diagnostic and prognostic biomarker in pediatric sepsis: A pilot study.
PMID:33378581
The TRIM9/TRIM67 neuronal interactome reveals novel activators of morphogenesis.
PMID:33378226
Cerebrospinal Fluid of Preeclamptic and Normotensive Pregnant Women Compared to Nonpregnant Women Analyzed with Mass Spectrometry.
PMID:33376863
In-depth blood proteome profiling analysis revealed distinct functional characteristics of plasma proteins between severe and non-severe COVID-19 patients.
PMID:33376242
Comparative Proteomics of Marinobacter sp. TT1 Reveals Corexit Impacts on Hydrocarbon Metabolism, Chemotactic Motility, and Biofilm Formation.
PMID:33374976
Pseudouridines of tRNA Anticodon Stem-Loop Have Unexpected Role in Mutagenesis in Pseudomonas sp.
PMID:33374637
Flow Cytometry Analysis of Circulating Extracellular Vesicle Subtypes from Fresh Peripheral Blood Samples.
PMID:33374539
N-terminal VP1 Truncations Favor T = 1 Norovirus-Like Particles.
PMID:33374273
Characterization of the Class I MHC Peptidome Resulting From DNCB Exposure of HaCaT Cells.
PMID:33372950
Sex impacts cardiac function and the proteome response to thyroid hormone in aged mice.
PMID:33372611
USP22 controls necroptosis by regulating receptor-interacting protein kinase 3 ubiquitination.
PMID:33369872
FAM111A induces nuclear dysfunction in disease and viral restriction.
PMID:33369867
Mass-spectrometry analysis of the human pineal proteome during night and day and in autism.
PMID:33368564
Analysis of Pan-omics Data in Human Interactome Network (APODHIN).
PMID:33363571
Synaptic Vesicles Dynamics in Neocortical Epilepsy.
PMID:33362472
A proteomics-based method for identifying antigens within immune complexes.
PMID:33362259
Granulocyte-Colony Stimulating Factor Reduces Cocaine-Seeking and Downregulates Glutamatergic Synaptic Proteins in Medial Prefrontal Cortex.
PMID:33361463
Salmonella enterica Serovars Dublin and Enteritidis Comparative Proteomics Reveals Differential Expression of Proteins Involved in Stress Resistance, Virulence, and Anaerobic Metabolism.
PMID:33361201
Dynamic 3D proteomes reveal protein functional alterations at high resolution in situ.
PMID:33357446
CROT (Carnitine O-Octanoyltransferase) Is a Novel Contributing Factor in Vascular Calcification via Promoting Fatty Acid Metabolism and Mitochondrial Dysfunction.
PMID:33356393
BUB-1 targets PP2A:B56 to regulate chromosome congression during meiosis I in C. elegans oocytes.
PMID:33355089
Mitochondrial defects in the respiratory complex I contribute to impaired translational initiation via ROS and energy homeostasis in SMA motor neurons.
PMID:33353564
Comparative Analysis of the Transcriptome, Proteome, and miRNA Profile of Kupffer Cells and Monocytes.
PMID:33352881
Enriched conditioning expands the regenerative ability of sensory neurons after spinal cord injury via neuronal intrinsic redox signaling.
PMID:33349630
Cancer-secreted miRNAs regulate amino-acid-induced mTORC1 signaling and fibroblast protein synthesis.
PMID:33345445
Proteomic and mitochondrial adaptations to early-life stress are distinct in juveniles and adults.
PMID:33344706
B-Cell-Specific Myd88 L252P Expression Causes a Premalignant Gammopathy Resembling IgM MGUS.
PMID:33343574
Differential proteomic analysis by SWATH-MS unravels the most dominant mechanisms underlying yeast adaptation to non-optimal temperatures under anaerobic conditions.
PMID:33339840
The mRNA Binding Proteome of Proliferating and Differentiated Muscle Cells.
PMID:33338663
Post-translational modification analysis of Saccharomyces cerevisiae histone methylation enzymes reveals phosphorylation sites of regulatory potential.
PMID:33334889
ApoC-III is a novel inducer of calcification in human aortic valves.
PMID:33334888
The mTOR regulated RNA-binding protein LARP1 requires PABPC1 for guided mRNA interaction.
PMID:33332560
Fast Deisotoping Algorithm and Its Implementation in the MSFragger Search Engine.
PMID:33332123
The versatile interactome of chloroplast ribosomes revealed by affinity purification mass spectrometry.
PMID:33330923
Seroconversion stages COVID19 into distinct pathophysiological states.
PMID:33330890
GFOGER Peptide Modifies the Protein Content of Extracellular Vesicles and Inhibits Vascular Calcification.
PMID:33330469
Ulcerative Colitis-Derived Colonoid Culture: A Multi-Mineral-Approach to Improve Barrier Protein Expression.
PMID:33330453
Lysine in Combination With Estradiol Promote Dissemination of Estrogen Receptor Positive Breast Cancer via Upregulation of U2AF1 and RPN2 Proteins.
PMID:33330095
The Puzzle of Metabolite Exchange and Identification of Putative Octotrico Peptide Repeat Expression Regulators in the Nascent Photosynthetic Organelles of Paulinella chromatophora.
PMID:33329499
Anti-tumour immunity induces aberrant peptide presentation in melanoma.
PMID:33328638
Small-molecule inhibitors of human mitochondrial DNA transcription.
PMID:33328633
Hypusination Orchestrates the Antimicrobial Response of Macrophages.
PMID:33326776
Peptide Correlation Analysis (PeCorA) Reveals Differential Proteoform Regulation.
PMID:33325715
Towards the molecular architecture of the peroxisomal receptor docking complex.
PMID:33323485
Peptide-Based Identification of Phytophthora Isolates and Phytophthora Detection in Planta.
PMID:33322721
Novel Broad-Spectrum Antiviral Inhibitors Targeting Host Factors Essential for Replication of Pathogenic RNA Viruses.
PMID:33322045
Degradation of arouser by endosomal microautophagy is essential for adaptation to starvation in Drosophila.
PMID:33318080
Systematic Review of Multi-Omics Approaches to Investigate Toxicological Effects in Macrophages.
PMID:33317022
ERCC1 mutations impede DNA damage repair and cause liver and kidney dysfunction in patients.
PMID:33315086
A conserved cysteine-based redox mechanism sustains TFEB/HLH-30 activity under persistent stress.
PMID:33314217
Urine proteomics for prediction of disease progression in patients with IgA nephropathy.
PMID:33313853
Proteome of fluid from human ovarian small antral follicles reveals insights in folliculogenesis and oocyte maturation.
PMID:33313811
Integrative vectors for regulated expression of SARS-CoV-2 proteins implicated in RNA metabolism.
PMID:33313418
The Central Role of Salivary Metalloproteases in Host Acquired Resistance to Tick Feeding.
PMID:33312963
ATP13A3 is a major component of the enigmatic mammalian polyamine transport system.
PMID:33310703
Hypoxia and Hypoxia-Inducible Factor-1α Regulate Endoplasmic Reticulum Stress in Nucleus Pulposus Cells: Implications of Endoplasmic Reticulum Stress for Extracellular Matrix Secretion.
PMID:33307037
Mass Spectral Analysis of Synthetic Peptides: Implications in Proteomics.
PMID:33304200
Reply to Comments on Proteomic Investigations of Two Pakistani Naja Snake Venom Species Unravel the Venom Complexity, Posttranslational Modifications, and Presence of Extracellular Vesicles. Toxins 2020, 12, 669.
PMID:33302394
Obesity Shapes Metabolism in the Tumor Microenvironment to Suppress Anti-Tumor Immunity.
PMID:33301708
Composition and origin of lung fluid proteome in premature infants and relationship to respiratory outcome.
PMID:33301538
Altered N-glycan composition impacts flagella-mediated adhesion in Chlamydomonas reinhardtii.
PMID:33300874
Detection and quantification of novel C-terminal TDP-43 fragments in ALS-TDP.
PMID:33300249
Thermostability profiling of MHC-bound peptides: a new dimension in immunopeptidomics and aid for immunotherapy design.
PMID:33298915
Autophagy-mediated metabolic effects of aspirin.
PMID:33298861
Single Mutation in the NFU1 Gene Metabolically Reprograms Pulmonary Artery Smooth Muscle Cells.
PMID:33297749
TINC- A Method to Dissect Regulatory Complexes at Single-Locus Resolution- Reveals an Extensive Protein Complex at the Nanog Promoter.
PMID:33296673
Mild hyperlipidemia in mice aggravates platelet responsiveness in thrombus formation and exploration of platelet proteome and lipidome.
PMID:33293576
Tandem mass tag-based proteomic analysis reveals cathepsin-mediated anti-autophagic and pro-apoptotic effects under proliferative diabetic retinopathy.
PMID:33293479
A Mutation Upstream of the rplN-rpsD Ribosomal Operon Downregulates Bordetella pertussis Virulence Factor Production without Compromising Bacterial Survival within Human Macrophages.
PMID:33293402
Intronic tRNAs of mitochondrial origin regulate constitutive and alternative splicing.
PMID:33292386
Subclinical effects of remote ischaemic conditioning in human kidney transplants revealed by quantitative proteomics.
PMID:33292164
Proteomic Study Identifies Glycolytic and Inflammation Pathways Involved in Recurrent Otitis Media.
PMID:33291465
Mitochondrial Transcription Factor A Binds to and Promotes Mutagenic Transcriptional Bypass of O4-Alkylthymidine Lesions.
PMID:33290046
A structural inventory of native ribosomal ABCE1-43S pre-initiation complexes.
PMID:33289941
Cytosolic sequestration of the vitamin D receptor as a therapeutic option for vitamin D-induced hypercalcemia.
PMID:33288743
RNA-binding proteins La and HuR cooperatively modulate translation repression of PDCD4 mRNA.
PMID:33288677
Hydrogen deuterium exchange mass spectrometry identifies the dominant paratope in CD20 antigen binding to the NCD1.2 monoclonal antibody.
PMID:33284343
Biostimulant Effects of Glutacetine® and Its Derived Formulations Mixed With N Fertilizer on Post-heading N Uptake and Remobilization, Seed Yield, and Grain Quality in Winter Wheat.
PMID:33281859
Differential Profile of Systemic Extracellular Vesicles From Sporadic and Familial Alzheimer's Disease Leads to Neuroglial and Endothelial Cell Degeneration.
PMID:33281599
Proximity-based proteomics reveals the thylakoid lumen proteome in the cyanobacterium Synechococcus sp. PCC 7002.
PMID:33280076
The substrate specificity of the human TRAPPII complex's Rab-guanine nucleotide exchange factor activity.
PMID:33277614
A substrate binding model for the KEOPS tRNA modifying complex.
PMID:33277478
Global proteomics of Ubqln2-based murine models of ALS.
PMID:33277362
Multivalent lipid targeting by the calcium-independent C2A domain of synaptotagmin-like protein 4/granuphilin.
PMID:33277360
Antioxidant ability of glutaredoxins and their role in symbiotic nitrogen fixation in Rhizobium leguminosarum bv. viciae 3841.
PMID:33277272
Post-Translational Modification Analysis of VDAC1 in ALS-SOD1 Model Cells Reveals Specific Asparagine and Glutamine Deamidation.
PMID:33276691
An Update of the Virion Proteome of Kaposi Sarcoma-Associated Herpesvirus.
PMID:33276600
The ubiquitylome of developing cortical neurons.
PMID:33274322
Establishing a mass spectrometry-based system for rapid detection of SARS-CoV-2 in large clinical sample cohorts.
PMID:33273458
The catalytic mechanism of vitamin K epoxide reduction in a cellular environment.
PMID:33273012
Beyond Melanin: Proteomics Reveals Virulence-Related Proteins in Paracoccidioides brasiliensis and Paracoccidioides lutzii Yeast Cells Grown in the Presence of L-Dihydroxyphenylalanine.
PMID:33271902
Spatially Targeted Proteomics of the Host-Pathogen Interface during Staphylococcal Abscess Formation.
PMID:33270421
GENCODE 2021.
PMID:33270111
Shotgun proteomics coupled to nanoparticle-based biomarker enrichment reveals a novel panel of extracellular matrix proteins as candidate serum protein biomarkers for early-stage breast cancer detection.
PMID:33267867
Divide-and-Conquer Matrisome Protein (DC-MaP) Strategy: An MS-Friendly Approach to Proteomic Matrisome Characterization.
PMID:33266304
RNF41 regulates the damage recognition receptor Clec9A and antigen cross-presentation in mouse dendritic cells.
PMID:33264090
Automated Capillary Isoelectric Focusing-Tandem Mass Spectrometry for Qualitative and Quantitative Top-Down Proteomics.
PMID:33263984
Comparative Multiplexed Interactomics of SARS-CoV-2 and Homologous Coronavirus Nonstructural Proteins Identifies Unique and Shared Host-Cell Dependencies.
PMID:33263384
Conformational maps of human 20S proteasomes reveal PA28- and immuno-dependent inter-ring crosstalks.
PMID:33262340
Profiling the Murine SUMO Proteome in Response to Cardiac Ischemia and Reperfusion Injury.
PMID:33260959
Function and Regulation of the Pyruvate Transporter CstA in Escherichia coli.
PMID:33260635
A Multi-Omics Protocol for Swine Feces to Elucidate Longitudinal Dynamics in Microbiome Structure and Function.
PMID:33260576
Actionable Cytopathogenic Host Responses of Human Alveolar Type 2 Cells to SARS-CoV-2.
PMID:33259812
Reduced reticulum-mitochondria Ca2+ transfer is an early and reversible trigger of mitochondrial dysfunctions in diabetic cardiomyopathy.
PMID:33258101
A Versatile Isobaric Tag Enables Proteome Quantification in Data-Dependent and Data-Independent Acquisition Modes.
PMID:33256395
Hepatitis B Core Protein Is Post-Translationally Modified through K29-Linked Ubiquitination.
PMID:33256078
Frequent Assembly of Chimeric Complexes in the Protein Interaction Network of an Interspecies Yeast Hybrid.
PMID:33252673
Systems Biology Methods Applied to Blood and Tissue for a Comprehensive Analysis of Immune Response to Hepatitis B Vaccine in Adults.
PMID:33250895
Genome- and Proteome-Wide Analysis of Lysine Acetylation in Vibrio vulnificus Vv180806 Reveals Its Regulatory Roles in Virulence and Antibiotic Resistance.
PMID:33250879
The European Bioinformatics Institute: empowering cooperation in response to a global health crisis.
PMID:33245775
Machine Learning Analysis of the Cerebrovascular Thrombi Proteome in Human Ischemic Stroke: An Exploratory Study.
PMID:33240201
Spatial proteomics defines the content of trafficking vesicles captured by golgin tethers.
PMID:33239640
Effects of Excess Manganese on the Xylem Sap Protein Profile of Tomato (Solanum lycopersicum) as Revealed by Shotgun Proteomic Analysis.
PMID:33238539
Open Search Strategy for Inferring the Masses of Cross-Link Adducts on Proteins.
PMID:33237725
MobiDB: intrinsically disordered proteins in 2021.
PMID:33237329
An endogenous PI3K interactome promoting astrocyte-mediated neuroprotection identifies a novel association with RNA-binding protein ZC3H14.
PMID:33234594
Is the Proteome of Bronchoalveolar Lavage Extracellular Vesicles a Marker of Advanced Lung Cancer?
PMID:33233545
Top-Down Proteomics of Endogenous Membrane Proteins Enabled by Cloud Point Enrichment and Multidimensional Liquid Chromatography-Mass Spectrometry.
PMID:33231430
The secretome of liver X receptor agonist-treated early outgrowth cells decreases atherosclerosis in Ldlr-/- mice.
PMID:33231376
Convergence of Plasma Metabolomics and Proteomics Analysis to Discover Signatures of High-Grade Serous Ovarian Cancer.
PMID:33228226
The expression of the acarbose biosynthesis gene cluster in Actinoplanes sp. SE50/110 is dependent on the growth phase.
PMID:33225887
Integrating Top-Down and Bottom-Up Mass Spectrometric Strategies for Proteomic Profiling of Iranian Saw-Scaled Viper, Echis carinatus sochureki, Venom.
PMID:33225711
Altered N-linked glycosylation in endometrial cancer.
PMID:33222001
Moniliella spathulata, an oil-degrading yeast, which promotes growth of barley in oil-polluted soil.
PMID:33219393
The Constitutive Proteome of Human Aqueous Humor and Race Specific Alterations.
PMID:33217969
Neuropeptidomic Analysis of a Genetically Defined Cell Type in Mouse Brain and Pituitary.
PMID:33217339
Phosphoproteomics reveals novel modes of function and inter-relationships among PIKKs in response to genotoxic stress.
PMID:33215756
Site-specific ubiquitination of the E3 ligase HOIP regulates apoptosis and immune signaling.
PMID:33215740
Deletion of the deISGylating enzyme USP18 enhances tumour cell antigenicity and radiosensitivity.
PMID:33214684
Cadmium stress dictates central carbon flux and alters membrane composition in Streptococcus pneumoniae.
PMID:33214631
Proteome Analysis Reveals a Significant Host-Specific Response in Rhizobium leguminosarum bv. viciae Endosymbiotic Cells.
PMID:33214187
Proteomic Insights into Senescence of Testicular Peritubular Cells from a Nonhuman Primate Model.
PMID:33213088
Proteomic Analysis of Porcine-Derived Collagen Membrane and Matrix.
PMID:33212864
From ArrayExpress to BioStudies.
PMID:33211879
PRMT1 inhibition induces differentiation of colon cancer cells.
PMID:33208761
The ATPase ATP6V1A facilitates rabies virus replication by promoting virion uncoating and interacting with the viral matrix protein.
PMID:33208464
A Selective Autophagy Pathway for Phase-Separated Endocytic Protein Deposits.
PMID:33207182
Proteomic analysis of extracellular vesicles reveals an immunogenic cargo in rheumatoid arthritis synovial fluid.
PMID:33204424
Natural Exogenous Antioxidant Defense against Changes in Human Skin Fibroblast Proteome Disturbed by UVA Radiation.
PMID:33204393
Dynamics of an LPS translocon induced by substrate and an antimicrobial peptide.
PMID:33199913
Exploring the Role of a Novel Peptide from Allomyrina dichotoma Larvae in Ameliorating Lipid Metabolism in Obesity.
PMID:33198343
Integrated Proteomic and Metabolomic Profiling of Phytophthora cinnamomi Attack on Sweet Chestnut (Castanea sativa) Reveals Distinct Molecular Reprogramming Proximal to the Infection Site and Away from It.
PMID:33198329
Prenatal Endotoxin Exposure Induces Fetal and Neonatal Renal Inflammation via Innate and Th1 Immune Activation in Preterm Pigs.
PMID:33193334
The Temperature-Regulation of Pseudomonas aeruginosa cmaX-cfrX-cmpX Operon Reveals an Intriguing Molecular Network Involving the Sigma Factors AlgU and SigX.
PMID:33193206
Rv2577 of Mycobacterium tuberculosis Is a Virulence Factor With Dual Phosphatase and Phosphodiesterase Functions.
PMID:33193164
Isolation and Characterization of Multi-Protein Complexes Enriched in the K-Cl Co-transporter 2 From Brain Plasma Membranes.
PMID:33192291
A translational program that suppresses metabolism to shield the genome.
PMID:33188200
A proteomic approach reveals possible molecular mechanisms and roles for endosymbiotic bacteria in begomovirus transmission by whiteflies.
PMID:33185242
OpenProt 2021: deeper functional annotation of the coding potential of eukaryotic genomes.
PMID:33179748
Co-activation of Akt, Nrf2, and NF-κB signals under UPRER in torpid Myotis ricketti bats for survival.
PMID:33177645
Digital microfluidic isolation of single cells for -Omics.
PMID:33177493
Proteomic Identification of Coxiella burnetii Effector Proteins Targeted to the Host Cell Mitochondria During Infection.
PMID:33177156
HYpro16: A Two-Proteome Mixture to Assess Interference in Isobaric Tag-Based Sample Multiplexing Experiments.
PMID:33175540
Nidogen 1-Enriched Extracellular Vesicles Facilitate Extrahepatic Metastasis of Liver Cancer by Activating Pulmonary Fibroblasts to Secrete Tumor Necrosis Factor Receptor 1.
PMID:33173740
First sequencing of ancient coral skeletal proteins.
PMID:33173075
Different Routes of Protein Folding Contribute to Improved Protein Production in Saccharomyces cerevisiae.
PMID:33173005
Spatial constraints on chromosomes are instrumental to meiotic pairing.
PMID:33172984
TSPAN1: A Novel Protein Involved in Head and Neck Squamous Cell Carcinoma Chemoresistance.
PMID:33167355
An Unbiased Approach to Mapping the Signaling Network of the Pseudorabies Virus US3 Protein.
PMID:33167340
Spontaneous regression of micro-metastases following primary tumor excision: a critical role for primary tumor secretome.
PMID:33158447
The Proteomic Landscape of Centromeric Chromatin Reveals an Essential Role for the Ctf19CCAN Complex in Meiotic Kinetochore Assembly.
PMID:33157029
Spatially and cell-type resolved quantitative proteomic atlas of healthy human skin.
PMID:33154365
Cyclin Y is expressed in Platelets and Modulates Integrin Outside-in Signaling.
PMID:33153214
The RSC (Remodels the Structure of Chromatin) complex of Candida albicans shows compositional divergence with distinct roles in regulating pathogenic traits.
PMID:33151931
Cysteine oxidation and disulfide formation in the ribosomal exit tunnel.
PMID:33149120
A trimeric Rab7 GEF controls NPC1-dependent lysosomal cholesterol export.
PMID:33144569
Aprotinin Inhibits SARS-CoV-2 Replication.
PMID:33143316
Proteomic Adaptation of Streptococcus pneumoniae to the Antimicrobial Peptide Human Beta Defensin 3 (hBD3) in Comparison to Other Cell Surface Stresses.
PMID:33143252
Marked Increased Production of Acute Phase Reactants by Skeletal Muscle during Cancer Cachexia.
PMID:33142864
β-Barrels covalently link peptidoglycan and the outer membrane in the α-proteobacterium Brucella abortus.
PMID:33139884
Novel Aza-podophyllotoxin derivative induces oxidative phosphorylation and cell death via AMPK activation in triple-negative breast cancer.
PMID:33139797
A First Glimpse of the Mexican Fruit Fly Anastrepha ludens (Diptera: Tephritidae) Antenna Morphology and Proteome in Response to a Proteinaceous Attractant.
PMID:33138264
Altered rRNA processing disrupts nuclear RNA homeostasis via competition for the poly(A)-binding protein Nab2.
PMID:33137177
Metabolic shift underlies recovery in reversible infantile respiratory chain deficiency.
PMID:33128823
Mass spectrometry-based abundance atlas of ABC transporters in human liver, gut, kidney, brain and skin.
PMID:33128234
The Complexity and Dynamics of the Tissue Glycoproteome Associated With Prostate Cancer Progression.
PMID:33127837
Electron-Based Dissociation Is Needed for O-Glycopeptides Derived from OpeRATOR Proteolysis.
PMID:33125225
Irgm2 and Gate-16 cooperatively dampen Gram-negative bacteria-induced caspase-11 response.
PMID:33124769
Child murder in the Early Bronze Age: proteomic sex identification of a cold case from Schleinbach, Austria.
PMID:33123298
Transcriptomes of Major Proximal Tubule Cell Culture Models.
PMID:33122286
Molecular architecture and domain arrangement of the placental malaria protein VAR2CSA suggests a model for carbohydrate binding.
PMID:33122198
Leishmania-infected macrophages release extracellular vesicles that can promote lesion development.
PMID:33122174
Protein Composition of the Subretinal Fluid Suggests Selective Diffusion of Vitreous Proteins in Retinal Detachment.
PMID:33117608
Proteomics of regenerated tissue in response to a titanium implant with a bioactive surface in a rat tibial defect model.
PMID:33116264
Proteomic signatures of acute oxidative stress response to paraquat in the mouse heart.
PMID:33116222
Phenotypic and proteomic approaches of the response to iron-limited condition in Staphylococcus lugdunensis.
PMID:33115407
Enzymatic Dissociation Induces Transcriptional and Proteotype Bias in Brain Cell Populations.
PMID:33114694
Radiation Response of Human Cardiac Endothelial Cells Reveals a Central Role of the cGAS-STING Pathway in the Development of Inflammation.
PMID:33114474
Proteomic analysis of mitochondrial biogenesis in cardiomyocytes differentiated from human induced pluripotent stem cells.
PMID:33112656
Cp1/cathepsin L is required for autolysosomal clearance in Drosophila.
PMID:33112206
SARS-CoV-2 evades immune detection in alveolar macrophages.
PMID:33112036
Tandem Mass Tag-Based Serum Proteome Profiling for Biomarker Discovery in Young Duchenne Muscular Dystrophy Boys.
PMID:33110978
O-Pair Search with MetaMorpheus for O-glycopeptide characterization.
PMID:33106676
Spastin recovery in hereditary spastic paraplegia by preventing neddylation-dependent degradation.
PMID:33106322
A combinatorial native MS and LC-MS/MS approach reveals high intrinsic phosphorylation of human Tau but minimal levels of other key modifications.
PMID:33106314
Proteomic Investigations of Two Pakistani Naja Snake Venoms Species Unravel the Venom Complexity, Posttranslational Modifications, and Presence of Extracellular Vesicles.
PMID:33105837
Heat Stress Triggers Differential Protein Accumulation in the Extracellular Matrix of Sorghum Cell Suspension Cultures.
PMID:33105781
Deciphering the Structural Enigma of HLA Class-II Binding Peptides for Enhanced Immunoinformatics-based Prediction of Vaccine Epitopes.
PMID:33103906
Ovarian Blood Sampling Identifies Junction Plakoglobin as a Novel Biomarker of Early Ovarian Cancer.
PMID:33102207
Putative Bifunctional Chorismate Mutase/Prephenate Dehydratase Contributes to the Virulence of Acidovorax citrulli.
PMID:33101336
Copper detoxification machinery of the brain-eating amoeba Naegleria fowleri involves copper-translocating ATPase and the antioxidant system.
PMID:33096396
Towards middle-up analysis of polyclonal antibodies: subclass-specific N-glycosylation profiling of murine immunoglobulin G (IgG) by means of HPLC-MS.
PMID:33093535
HLA-DR15 Molecules Jointly Shape an Autoreactive T Cell Repertoire in Multiple Sclerosis.
PMID:33091337
The on-premise data sharing infrastructure e!DAL: Foster FAIR data for faster data acquisition.
PMID:33090199
Comparative gender peptidomics of Bothrops atrox venoms: are there differences between them?
PMID:33088286
Phosphodiesterase 2A2 regulates mitochondria clearance through Parkin-dependent mitophagy.
PMID:33087821
Identification of drivers of breast cancer invasion by secretome analysis: insight into CTGF signaling.
PMID:33087801
Fasnall Induces Atypically Transient Stress Granules Independently of FASN Inhibition.
PMID:33083719
Mass Spectrometric Analysis of Antibody-Epitope Peptide Complex Dissociation: Theoretical Concept and Practical Procedure of Binding Strength Characterization.
PMID:33080923
Neuroretinal-Derived Caveolin-1 Promotes Endotoxin-Induced Inflammation in the Murine Retina.
PMID:33079993
Comprehensive proteomic investigation of infectious and inflammatory changes in late preterm prelabour rupture of membranes.
PMID:33077789
A streamlined pipeline for multiplexed quantitative site-specific N-glycoproteomics.
PMID:33077710
Near-Single-Cell Proteomics Profiling of the Proximal Tubular and Glomerulus of the Normal Human Kidney.
PMID:33072769
Lineage-Specific Proteomic Signatures in the Mycobacterium tuberculosis Complex Reveal Differential Abundance of Proteins Involved in Virulence, DNA Repair, CRISPR-Cas, Bioenergetics and Lipid Metabolism.
PMID:33072011
The Composition and the Structure of MCC/Eisosomes in Neurospora crassa.
PMID:33071997
A high-stringency blueprint of the human proteome.
PMID:33067450
Mapping glycan-mediated galectin-3 interactions by live cell proximity labeling.
PMID:33067390
OpenPepXL: An Open-Source Tool for Sensitive Identification of Cross-Linked Peptides in XL-MS.
PMID:33067342
Comparative proteomics analysis of dietary restriction in Drosophila.
PMID:33064752
Engineering Af1521 improves ADP-ribose binding and identification of ADP-ribosylated proteins.
PMID:33060572
Toxin-like neuropeptides in the sea anemone Nematostella unravel recruitment from the nervous system to venom.
PMID:33060291
Comparative host-coronavirus protein interaction networks reveal pan-viral disease mechanisms.
PMID:33060197
NEDD4L-mediated Merlin ubiquitination facilitates Hippo pathway activation.
PMID:33058421
An integrated analysis of Maglemose bone points reframes the Early Mesolithic of Southern Scandinavia.
PMID:33057088
Temporal Proteomic Profiling of SH-SY5Y Differentiation with Retinoic Acid Using FAIMS and Real-Time Searching.
PMID:33054241
Improved Sensitivity of Ultralow Flow LC-MS-Based Proteomic Profiling of Limited Samples Using Monolithic Capillary Columns and FAIMS Technology.
PMID:33054160
A Comprehensive Subcellular Atlas of the Toxoplasma Proteome via hyperLOPIT Provides Spatial Context for Protein Functions.
PMID:33053376
Activation of the CARD8 Inflammasome Requires a Disordered Region.
PMID:33053349
Quantitative Proteomics Analysis of Lytic KSHV Infection in Human Endothelial Cells Reveals Targets of Viral Immune Modulation.
PMID:33053346
Stress-Induced Translation Inhibition through Rapid Displacement of Scanning Initiation Factors.
PMID:33053322
H3K4me2 regulates the recovery of protein biosynthesis and homeostasis following DNA damage.
PMID:33046905
Comparison of Proteomic Responses as Global Approach to Antibiotic Mechanism of Action Elucidation.
PMID:33046497
Neural cell adhesion molecule 1 is a novel autoantigen in membranous lupus nephritis.
PMID:33045259
Quantitative Visions of Reality at the Tick-Host Interface: Biochemistry, Genomics, Proteomics, and Transcriptomics as Measures of Complete Inventories of the Tick Sialoverse.
PMID:33042874
Combined Methylome, Transcriptome and Proteome Analyses Document Rapid Acclimatization of a Bacterium to Environmental Changes.
PMID:33042055
Growth media selection alters the proteome profiles of three model microorganisms.
PMID:33038513
The E3 ubiquitin ligase HectD3 attenuates cardiac hypertrophy and inflammation in mice.
PMID:33037313
The reductive glycine pathway allows autotrophic growth of Desulfovibrio desulfuricans.
PMID:33037220
Rational design of a microbial consortium of mucosal sugar utilizers reduces Clostridiodes difficile colonization.
PMID:33037214
Bacillus cereus Decreases NHE and CLO Exotoxin Synthesis to Maintain Appropriate Proteome Dynamics During Growth at Low Temperature.
PMID:33036317
The tissue proteome in the multi-omic landscape of kidney disease.
PMID:33028957
Temporal Proteomic Analysis of Herpes Simplex Virus 1 Infection Reveals Cell-Surface Remodeling via pUL56-Mediated GOPC Degradation.
PMID:33027661
Respiratory Supercomplexes Promote Mitochondrial Efficiency and Growth in Severely Hypoxic Pancreatic Cancer.
PMID:33027658
A Novel Proteomic Method Reveals NLS Tagging of T-DM1 Contravenes Classical Nuclear Transport in a Model of HER2-Positive Breast Cancer.
PMID:33024794
The Glycoprotease CpaA Secreted by Medically Relevant Acinetobacter Species Targets Multiple O-Linked Host Glycoproteins.
PMID:33024038
Spatially Resolved Activity-based Proteomic Profiles of the Murine Small Intestinal Lipases.
PMID:33023980
The glucose-sensing transcription factor ChREBP is targeted by proline hydroxylation.
PMID:33023907
Proteotranscriptomics assisted gene annotation and spatial proteomics of Bombyx mori BmN4 cell line.
PMID:33023468
Fast and comprehensive N- and O-glycoproteomics analysis with MSFragger-Glyco.
PMID:33020657
Surfaceome dynamics reveal proteostasis-independent reorganization of neuronal surface proteins during development and synaptic plasticity.
PMID:33020478
Proteotyping Environmental Microorganisms by Phylopeptidomics: Case Study Screening Water from a Radioactive Material Storage Pool.
PMID:33020444
Exploring metal availability in the natural niche of Streptococcus pneumoniae to discover potential vaccine antigens.
PMID:33017224
Isobaric Tag-Based Protein Profiling across Eight Human Cell Lines Using High-Field Asymmetric Ion Mobility Spectrometry and Real-Time Database Searching.
PMID:33015980
Cross-Stress Adaptation in a Piezophilic and Hyperthermophilic Archaeon From Deep Sea Hydrothermal Vent.
PMID:33013758
Selection for Resistance to a Glyphosate-Containing Herbicide in Salmonella enterica Does Not Result in a Sustained Activation of the Tolerance Response or Increased Cross-Tolerance and Cross-Resistance to Clinically Important Antibiotics.
PMID:33008821
Combinatory Treatment of Canavanine and Arginine Deprivation Efficiently Targets Human Glioblastoma Cells via Pleiotropic Mechanisms.
PMID:33008000
XPO1E571K Mutation Modifies Exportin 1 Localisation and Interactome in B-cell Lymphoma.
PMID:33007990
Pancreatic Tissue Proteomics Unveils Key Proteins, Pathways, and Networks Associated with Type 1 Diabetes.
PMID:33007151
Integrative Analysis of Membrane Proteome and MicroRNA Reveals Novel Lung Cancer Metastasis Biomarkers.
PMID:33005184
Faecal microbiota transplant from aged donor mice affects spatial learning and memory via modulating hippocampal synaptic plasticity- and neurotransmission-related proteins in young recipients.
PMID:33004079
Structure of the TFIIIC subcomplex τA provides insights into RNA polymerase III pre-initiation complex formation.
PMID:32999288
Staphylococcus aureus Releases Proinflammatory Membrane Vesicles To Resist Antimicrobial Fatty Acids.
PMID:32999082
Fusidic acid resistance through changes in the dynamics of the drug target.
PMID:32999060
Comprehensive histone epigenetics: A mass spectrometry based screening assay to measure epigenetic toxicity.
PMID:32995308
Structure-based validation can drastically underestimate error rate in proteome-wide cross-linking mass spectrometry studies.
PMID:32994567
Sex Steroids Induce Membrane Stress Responses and Virulence Properties in Pseudomonas aeruginosa.
PMID:32994320
Memory-Enhancing Effects of Origanum majorana Essential Oil in an Alzheimer's Amyloid beta1-42 Rat Model: A Molecular and Behavioral Study.
PMID:32993114
Molecular determinants of MED1 interaction with the DNA bound VDR-RXR heterodimer.
PMID:32990725
Metabolic precision labeling enables selective probing of O-linked N-acetylgalactosamine glycosylation.
PMID:32989128
Matrix reverses immortalization-mediated stem cell fate determination.
PMID:32987274
Genome-Wide Identification of Dickeya solani Transcriptional Units Up-Regulated in Response to Plant Tissues From a Crop-Host Solanum tuberosum and a Weed-Host Solanum dulcamara.
PMID:32983224
Biogenesis of HLA Ligand Presentation in Immune Cells Upon Activation Reveals Changes in Peptide Length Preference.
PMID:32983136
Yeast homologs of human MCUR1 regulate mitochondrial proline metabolism.
PMID:32978391
The atypical chemokine receptor 3 interacts with Connexin 43 inhibiting astrocytic gap junctional intercellular communication.
PMID:32978390
α2-Macroglobulin-like protein 1 can conjugate and inhibit proteases through their hydroxyl groups, because of an enhanced reactivity of its thiol ester.
PMID:32978260
PFN2 and NAA80 cooperate to efficiently acetylate the N-terminus of actin.
PMID:32978259
GADD34 is a modulator of autophagy during starvation.
PMID:32978159
Structural basis for DNA recognition and allosteric control of the retinoic acid receptors RAR-RXR.
PMID:32974652
Combined Proteome and Transcriptome Analysis of Heat-Primed Azalea Reveals New Insights Into Plant Heat Acclimation Memory.
PMID:32973837
The Proteome and Secretome of Cortical Brain Cells Infected With Herpes Simplex Virus.
PMID:32973653
The CNS Myelin Proteome: Deep Profile and Persistence After Post-mortem Delay.
PMID:32973451
Yeast Ppz1 protein phosphatase toxicity involves the alteration of multiple cellular targets.
PMID:32973189
MFSD7C switches mitochondrial ATP synthesis to thermogenesis in response to heme.
PMID:32973183
ATR is essential for preservation of cell mechanics and nuclear integrity during interstitial migration.
PMID:32973141
Abiotic and past climatic conditions drive protein abundance variation among natural populations of the caddisfly Crunoecia irrorata.
PMID:32968134
Genetic screens reveal a central role for heme metabolism in artemisinin susceptibility.
PMID:32968076
Selective autophagy regulates heat stress memory in Arabidopsis by NBR1-mediated targeting of HSP90.1 and ROF1.
PMID:32967551
Applications of Genome-Wide Screening and Systems Biology Approaches in Drug Repositioning.
PMID:32967266
Mapping Physiological ADP-Ribosylation Using Activated Ion Electron Transfer Dissociation.
PMID:32966781
Molecular classification of the placebo effect in nausea.
PMID:32966280
RNF43 truncations trap CK1 to drive niche-independent self-renewal in cancer.
PMID:32965059
Affinity proteomic dissection of the human nuclear cap-binding complex interactome.
PMID:32960270
Rubisco lysine acetylation occurs at very low stoichiometry in mature Arabidopsis leaves: implications for regulation of enzyme function.
PMID:32959870
Vitamin D3 receptor polymorphisms regulate T cells and T cell-dependent inflammatory diseases.
PMID:32958661
Endoplasmic reticulum chaperones stabilize ligand-receptive MR1 molecules for efficient presentation of metabolite antigens.
PMID:32958637
Hepatic FTO is dispensable for the regulation of metabolism but counteracts HCC development in vivo.
PMID:32956847
A regulatory region on RIPK2 is required for XIAP binding and NOD signaling activity.
PMID:32954645
Mass spectrometry characterization of light chain fragmentation sites in cardiac AL amyloidosis: insights into the timing of proteolysis.
PMID:32952127
Rapid and direct control of target protein levels with VHL-recruiting dTAG molecules.
PMID:32948771
Integration of absolute multi-omics reveals dynamic protein-to-RNA ratios and metabolic interplay within mixed-domain microbiomes.
PMID:32948758
Can Scoliotic Discs Be Controls for Molecular Studies in Intervertebral Disc Research? Insights From Proteomics.
PMID:32945197
Global reprogramming of virulence and antibiotic resistance in Pseudomonas aeruginosa by a single nucleotide polymorphism in elongation factor, fusA1.
PMID:32943550
Enzyme-Constrained Models and Omics Analysis of Streptomyces coelicolor Reveal Metabolic Changes that Enhance Heterologous Production.
PMID:32942174
Quantitative mapping of transcriptome and proteome dynamics during polarization of human iPSC-derived neurons.
PMID:32940601
Deep Learning in Proteomics.
PMID:32939979
Quantitative Data-Independent Acquisition Glycoproteomics of Sparkling Wine.
PMID:32938748
Extensive SUMO Modification of Repressive Chromatin Factors Distinguishes Pluripotent from Somatic Cells.
PMID:32937131
Using Deep Learning to Extrapolate Protein Expression Measurements.
PMID:32937025
Diabetic nephropathy associates with deregulation of enzymes involved in kidney sulphur metabolism.
PMID:32935914
Generation of SARS-CoV-2 S1 Spike Glycoprotein Putative Antigenic Epitopes in Vitro by Intracellular Aminopeptidases.
PMID:32931291
Research on the Human Proteome Reaches a Major Milestone: >90% of Predicted Human Proteins Now Credibly Detected, According to the HUPO Human Proteome Project.
PMID:32931287
Exploring GPCR-arrestin interfaces with genetically encoded crosslinkers.
PMID:32929862
MassIVE.quant: a community resource of quantitative mass spectrometry-based proteomics datasets.
PMID:32929271
Proteome specialization of anaerobic fungi during ruminal degradation of recalcitrant plant fiber.
PMID:32929206
Regulation of titin-based cardiac stiffness by unfolded domain oxidation (UnDOx).
PMID:32929035
A malectin-like receptor kinase regulates cell death and pattern-triggered immunity in soybean.
PMID:32924279
Nucleoporin TPR is an integral component of the TREX-2 mRNA export pathway.
PMID:32917881
Oxidation of Cytochrome 605 Is the Rate-Limiting Step when Ferrimicrobium acidiphilum Respires Aerobically on Soluble Iron.
PMID:32917753
Connectivity mapping of glomerular proteins identifies dimethylaminoparthenolide as a new inhibitor of diabetic kidney disease.
PMID:32913274
Mapping and identification of soft corona proteins at nanoparticles and their impact on cellular association.
PMID:32913217
CaMKK2 is inactivated by cAMP-PKA signaling and 14-3-3 adaptor proteins.
PMID:32913128
O-Fucosylation of ADAMTSL2 is required for secretion and is impacted by geleophysic dysplasia-causing mutations.
PMID:32913123
IgE Effector Mechanisms, in Concert with Mast Cells, Contribute to Acquired Host Defense against Staphylococcusaureus.
PMID:32910906
The type VII secretion system protects Staphylococcus aureus against antimicrobial host fatty acids.
PMID:32908165
A moonlighting role for enzymes of glycolysis in the co-localization of mitochondria and chloroplasts.
PMID:32908151
Phosphorylation of Toxoplasma gondii Secreted Proteins during Acute and Chronic Stages of Infection.
PMID:32907954
Some like it hot: population-specific adaptations in venom production to abiotic stressors in a widely distributed cnidarian.
PMID:32907568
Trypanosoma vivax infection in sheep: Different patterns of virulence and pathogenicity associated with differentially expressed proteomes.
PMID:32904712
Spleen proteomics data from high fat diet fed mice.
PMID:32904176
Peracylation Coupled with Tandem Mass Spectrometry for Structural Sequencing of Sulfated Glycosaminoglycan Mixtures without Depolymerization.
PMID:32902282
Molecular basis for the bifunctional Uba4-Urm1 sulfur-relay system in tRNA thiolation and ubiquitin-like conjugation.
PMID:32901956
Cholesterol sensing by CD81 is important for hepatitis C virus entry.
PMID:32900848
The Molecular Floodgates of Stress-Induced Senescence Reveal Translation, Signalling and Protein Activity Central to the Post-Mortem Proteome.
PMID:32899302
Technical report: Targeted proteomic analysis reveals enrichment of atypical ubiquitin chains in contractile murine tissues.
PMID:32898700
Structural Analysis of the Regulatory GAF Domains of cGMP Phosphodiesterase Elucidates the Allosteric Communication Pathway.
PMID:32898583
Context dependent effects of ascorbic acid treatment in TET2 mutant myeloid neoplasia.
PMID:32895473
Histone chaperone FACT represses retrotransposon MERVL and MERVL-derived cryptic promoters.
PMID:32894293
Isobaric Matching between Runs and Novel PSM-Level Normalization in MaxQuant Strongly Improve Reporter Ion-Based Quantification.
PMID:32892627
Organoids Model Transcriptional Hallmarks of Oncogenic KRAS Activation in Lung Epithelial Progenitor Cells.
PMID:32891189
Allosteric Priming of E. coli CheY by the Flagellar Motor Protein FliM.
PMID:32891187
A CEP Peptide Receptor-Like Kinase Regulates Auxin Biosynthesis and Ethylene Signaling to Coordinate Root Growth and Symbiotic Nodulation in Medicago truncatula.
PMID:32887805
Polydisperse molecular architecture of connexin 26/30 heteromeric hemichannels revealed by atomic force microscopy imaging.
PMID:32887797
Homozygous expression of the myofibrillar myopathy-associated p.W2710X filamin C variant reveals major pathomechanisms of sarcomeric lesion formation.
PMID:32887649
Mass spectrometry-based analysis of formalin-fixed, paraffin-embedded distal cholangiocarcinoma identifies stromal thrombospondin-2 as a potential prognostic marker.
PMID:32887625
Deciphering the secretome of leukocyte-platelet rich fibrin: towards a better understanding of its wound healing properties.
PMID:32884030
Citrus Vascular Proteomics Highlights the Role of Peroxidases and Serine Proteases during Huanglongbing Disease Progression.
PMID:32883801
Palaeoproteomics gives new insight into early southern African pastoralism.
PMID:32879376
Mutant thermal proteome profiling for characterization of missense protein variants and their associated phenotypes within the proteome.
PMID:32878984
Growth Factor Receptor Signaling Inhibition Prevents SARS-CoV-2 Replication.
PMID:32877642
Lysine acetylation of F-actin decreases tropomyosin-based inhibition of actomyosin activity.
PMID:32873710
Exploring the Diversity of Cysteine-Rich Natural Product Peptides via MS/MS Fingerprint Ions.
PMID:32872784
Lowering Sample Requirements to Study Tyrosine Kinase Signaling Using Phosphoproteomics with the TMT Calibrator Approach.
PMID:32865326
The Role of RodA-Conserved Cysteine Residues in the Aspergillus fumigatus Conidial Surface Organization.
PMID:32859091
A ubiquitin variant-based affinity approach selectively identifies substrates of the ubiquitin ligase E6AP in complex with HPV-11 E6 or HPV-16 E6.
PMID:32855237
Proteomic Profiling of Extracellular Vesicles Derived from Cerebrospinal Fluid of Alzheimer's Disease Patients: A Pilot Study.
PMID:32854315
BAG5 Promotes Alpha-Synuclein Oligomer Formation and Functionally Interacts With the Autophagy Adaptor Protein p62.
PMID:32850835
Host-Defense Peptides Caerin 1.1 and 1.9 Stimulate TNF-Alpha-Dependent Apoptotic Signals in Human Cervical Cancer HeLa Cells.
PMID:32850805
Comparative Genomic and Secretomic Analysis Provide Insights Into Unique Agar Degradation Function of Marine Bacterium Vibrio fluvialis A8 Through Horizontal Gene Transfer.
PMID:32849481
Verticillium longisporum Elicits Media-Dependent Secretome Responses With Capacity to Distinguish Between Plant-Related Environments.
PMID:32849460
Longitudinal Stroke Recovery Associated With Dysregulation of Complement System-A Proteomics Pathway Analysis.
PMID:32849183
ITEM-THREE analysis of a monoclonal anti-malaria antibody reveals its assembled epitope on the pfMSP119 antigen.
PMID:32848020
The Viral Polymerase Complex Mediates the Interaction of Viral Ribonucleoprotein Complexes with Recycling Endosomes during Sendai Virus Assembly.
PMID:32843550
An Integrative Omics Approach Reveals Involvement of BRCA1 in Hepatic Metastatic Progression of Colorectal Cancer.
PMID:32842712
Enrichment of microsomes from Chinese hamster ovary cells by subcellular fractionation for its use in proteomic analysis.
PMID:32841274
Quantitative proteomic dataset from oro- and naso-pharyngeal swabs used for COVID-19 diagnosis: Detection of viral proteins and host's biological processes altered by the infection.
PMID:32835036
Pseudomonas aeruginosa Presents Multiple Vital Changes in Its Proteome in the Presence of 3-Hydroxyphenylacetic Acid, a Promising Antimicrobial Agent.
PMID:32832748
Cell density-dependent proteolysis by HtrA1 induces translocation of zyxin to the nucleus and increased cell survival.
PMID:32826880
Multiple Drug-Induced Stress Responses Inhibit Formation of Escherichia coli Biofilms.
PMID:32826218
Protein Identification of Venoms of the African Spitting Cobras, Naja mossambica and Naja nigricincta nigricincta.
PMID:32823821
Decoding altitude-activated regulatory mechanisms occurring during apple peel ripening.
PMID:32821403
Canonical Notch ligands and Fringes have distinct effects on NOTCH1 and NOTCH2.
PMID:32820046
Proteome reallocation from amino acid biosynthesis to ribosomes enables yeast to grow faster in rich media.
PMID:32817546
Biotinylated Surfome Profiling Identifies Potential Biomarkers for Diagnosis and Therapy of Aspergillus fumigatus Infection.
PMID:32817453
Analytical Guidelines for co-fractionation Mass Spectrometry Obtained through Global Profiling of Gold Standard Saccharomyces cerevisiae Protein Complexes.
PMID:32817346
Generation and validation of recombinant antibodies to study human aminoacyl-tRNA synthetases.
PMID:32817337
Immunostimulation by Lactobacillus kefiri S-layer proteins with distinct glycosylation patterns requires different lectin partners.
PMID:32817316
Phosphorylation-Dependent Assembly of a 14-3-3 Mediated Signaling Complex during Red Blood Cell Invasion by Plasmodium falciparum Merozoites.
PMID:32817103
Grad-seq shines light on unrecognized RNA and protein complexes in the model bacterium Escherichia coli.
PMID:32813020
Phosphorylation by Aurora B kinase regulates caspase-2 activity and function.
PMID:32811973
Targeting a helix-in-groove interaction between E1 and E2 blocks ubiquitin transfer.
PMID:32807965
Dissimilatory sulfate reduction in the archaeon 'Candidatus Vulcanisaeta moutnovskia' sheds light on the evolution of sulfur metabolism.
PMID:32807893
Mitochondrial dysfunction caused by outer membrane vesicles from Gram-negative bacteria activates intrinsic apoptosis and inflammation.
PMID:32807891
Selective inhibition of STAT3 signaling using monobodies targeting the coiled-coil and N-terminal domains.
PMID:32807795
HIF-1α and HIF-2α differently regulate tumour development and inflammation of clear cell renal cell carcinoma in mice.
PMID:32807776
Cellular and Extracellular Proteome of the Animal Pathogen Corynebacterium silvaticum, a Close Relative of Zoonotic Corynebacterium ulcerans and Corynebacterium pseudotuberculosis.
PMID:32806579
In-depth quantitative proteomics uncovers specie-specific metabolic programs in Leishmania (Viannia) species.
PMID:32804927
Mitochondrial fatty acid synthesis coordinates oxidative metabolism in mammalian mitochondria.
PMID:32804083
Premature Activation of Immune Transcription Programs in Autoimmune-Predisposed Mouse Embryonic Stem Cells and Blastocysts.
PMID:32796510
Splicing variation of BMP2K balances abundance of COPII assemblies and autophagic degradation in erythroid cells.
PMID:32795391
ABHD11 maintains 2-oxoglutarate metabolism by preserving functional lipoylation of the 2-oxoglutarate dehydrogenase complex.
PMID:32792488
MIC26 and MIC27 cooperate to regulate cardiolipin levels and the landscape of OXPHOS complexes.
PMID:32788226
A Collision-Induced Dissociation Cleavable Isobaric Tag for Peptide Fragment Ion-Based Quantification in Proteomics.
PMID:32786690
Toward a Sample Metadata Standard in Public Proteomics Repositories.
PMID:32786688
Insights into Biomechanical and Proteomic Characteristics of Small Diameter Vascular Grafts Utilizing the Human Umbilical Artery.
PMID:32785189
Quantitative Proteomics Comparison of Total Expressed Proteomes of Anisakis simplex Sensu Stricto, A. pegreffii, and Their Hybrid Genotype.
PMID:32785065
A comprehensive CHO SWATH-MS spectral library for robust quantitative profiling of 10,000 proteins.
PMID:32782267
Comprehensive plasma proteomic profiling reveals biomarkers for active tuberculosis.
PMID:32780727
Type 2 diabetes risk gene Dusp8 regulates hypothalamic Jnk signaling and insulin sensitivity.
PMID:32780722
Salivary proteotypes of gingivitis tolerance and resilience.
PMID:32777086
Hunting monolignol transporters: membrane proteomics and biochemical transport assays with membrane vesicles of Norway spruce.
PMID:32777074
FAM111 protease activity undermines cellular fitness and is amplified by gain-of-function mutations in human disease.
PMID:32776417
A Multiomics Approach Unravels New Toxins With Possible In Silico Antimicrobial, Antiviral, and Antitumoral Activities in the Venom of Acanthoscurria rondoniae.
PMID:32774304
Deciphering the immunogenic potential of wheat flour: a reference map of the salt-soluble proteome from the U.S. wheat Butte 86.
PMID:32774173
Parallel Murine and Human Plaque Proteomics Reveals Pathways of Plaque Rupture.
PMID:32762496
Data on proteome of Mycoplasma hominis cultivated with arginine or thymidine as a carbon source.
PMID:32760766
PUB11-Dependent Ubiquitination of the Phospholipid Flippase ALA10 Modifies ALA10 Localization and Affects the Pool of Linolenic Phosphatidylcholine.
PMID:32760418
Wheat Line "RYNO3936" Is Associated With Delayed Water Stress-Induced Leaf Senescence and Rapid Water-Deficit Stress Recovery.
PMID:32760414
Symbiosis between nanohaloarchaeon and haloarchaeon is based on utilization of different polysaccharides.
PMID:32759215
The AAA + ATPase valosin-containing protein (VCP)/p97/Cdc48 interaction network in Leishmania.
PMID:32753747
Chemical proteomics tracks virus entry and uncovers NCAM1 as Zika virus receptor.
PMID:32753727
Pilot Evaluation of Two Fasciola hepatica Biomarkers for Supporting Triclabendazole (TCBZ) Efficacy Diagnostics.
PMID:32751696
AKT-dependent NOTCH3 activation drives tumor progression in a model of mesenchymal colorectal cancer.
PMID:32749453
BRAHMA-interacting proteins BRIP1 and BRIP2 are core subunits of Arabidopsis SWI/SNF complexes.
PMID:32747760
NuRD subunit CHD4 regulates super-enhancer accessibility in rhabdomyosarcoma and represents a general tumor dependency.
PMID:32744500
Proteome dynamics analysis identifies functional roles of SDE2 and hypoxia in DNA damage response in prostate cancer cells.
PMID:32743553
High-density lipoproteins are a potential therapeutic target for age-related macular degeneration.
PMID:32737203
Endothelial-Derived Interleukin-1α Activates Innate Immunity by Promoting the Bactericidal Activity of Transendothelial Neutrophils.
PMID:32733891
Strategies to enable large-scale proteomics for reproducible research.
PMID:32732981
Autophagy deficiency promotes triple-negative breast cancer resistance to T cell-mediated cytotoxicity by blocking tenascin-C degradation.
PMID:32732922
Protamine-2 Deficiency Initiates a Reactive Oxygen Species (ROS)-Mediated Destruction Cascade during Epididymal Sperm Maturation in Mice.
PMID:32727081
Mitochondria and Peroxisome Remodeling across Cytomegalovirus Infection Time Viewed through the Lens of Inter-ViSTA.
PMID:32726614
Optimization of skeletal protein preparation for LC-MS/MS sequencing yields additional coral skeletal proteins in Stylophora pistillata.
PMID:32724895
Structural basis of CD4 downregulation by HIV-1 Nef.
PMID:32719457
Piggybacking on Classical Import and Other Non-Classical Mechanisms of Nuclear Import Appear Highly Prevalent within the Human Proteome.
PMID:32718019
MiT/TFE factors control ER-phagy via transcriptional regulation of FAM134B.
PMID:32716134
Descriptive Proteome Analysis to Investigate Context-Dependent Treatment Responses to OXPHOS Inhibition in Colon Carcinoma Cells Grown as Monolayer and Multicellular Tumor Spheroids.
PMID:32715210
Proteomic and Bioinformatic Investigations of Heat-Treated Anisakis simplex Third-Stage Larvae.
PMID:32708775
The Lipid Receptor G2A (GPR132) Mediates Macrophage Migration in Nerve Injury-Induced Neuropathic Pain.
PMID:32708184
Phasin interactome reveals the interplay of PhaF with the polyhydroxyalkanoate transcriptional regulatory protein PhaD in Pseudomonas putida.
PMID:32705785
Ex Vivo Equine Cartilage Explant Osteoarthritis Model: A Metabolomics and Proteomics Study.
PMID:32701294
Metabolic coessentiality mapping identifies C12orf49 as a regulator of SREBP processing and cholesterol metabolism.
PMID:32694732
A benzimidazole inhibitor attenuates sterile inflammation induced in a model of systemic autoinflammation in female mice.
PMID:32694575
Genome-Scale Transcription-Translation Mapping Reveals Features of Zymomonas mobilis Transcription Units and Promoters.
PMID:32694125
A quantitative thiol reactivity profiling platform to analyze redox and electrophile reactive cysteine proteomes.
PMID:32690958
A mass spectrometry-based proteome map of drug action in lung cancer cell lines.
PMID:32690943
Specific thylakoid protein phosphorylations are prerequisites for overwintering of Norway spruce (Picea abies) photosynthesis.
PMID:32690715
Ozone-derived oxysterols impair lung macrophage phagocytosis via adduction of some phagocytosis receptors.
PMID:32690608
Probing SWATH-MS as a tool for proteome level quantification in a nonmodel fish.
PMID:32687632
RORα phosphorylation by casein kinase 1α as glucose signal to regulate estrogen sulfation in human liver cells.
PMID:32686824
Proteomics Reveals that Methylmalonyl-CoA Mutase Modulates Cell Architecture and Increases Susceptibility to Stress.
PMID:32679819
Multi-layered proteomic analyses decode compositional and functional effects of cancer mutations on kinase complexes.
PMID:32678104
Separation and Paired Proteome Profiling of Plant Chloroplast and Cytoplasmic Ribosomes.
PMID:32674508
Optical Interrogation of Sympathetic Neuronal Effects on Macroscopic Cardiomyocyte Network Dynamics.
PMID:32674058
c-Src functionality controls self-renewal and glucose metabolism in MCF7 breast cancer stem cells.
PMID:32673341
Dataset of bovine mammary gland dry secretion proteome from the end of lactation through day 21 of the dry period.
PMID:32671157
Regulation of stem cell function and neuronal differentiation by HERV-K via mTOR pathway.
PMID:32669437
Ubiquitin ligase SMURF2 enhances epidermal growth factor receptor stability and tyrosine-kinase inhibitor resistance.
PMID:32669362
Genome wide transcriptomic analysis of the soil ammonia oxidizing archaeon Nitrososphaera viennensis upon exposure to copper limitation.
PMID:32665710
Structural features of bovine colostral immunoglobulin that confer proteolytic stability in a simulated intestinal fluid.
PMID:32665404
Prothrombin is a binding partner of the human receptor of advanced glycation end products.
PMID:32665403
A redox switch regulates the structure and function of anti-apoptotic BFL-1.
PMID:32661419
Rab27a co-ordinates actin-dependent transport by controlling organelle-associated motors and track assembly proteins.
PMID:32661310
Extreme Acetylation of the Cardiac Mitochondrial Proteome Does Not Promote Heart Failure.
PMID:32660330
Toxicoproteomic Profiling of hPXR Transgenic Mice Treated with Rifampicin and Isoniazid.
PMID:32660103
Overexpression of Sedoheptulose-1,7-Bisphosphatase Enhances Photosynthesis in Chlamydomonas reinhardtii and Has No Effect on the Abundance of Other Calvin-Benson Cycle Enzymes.
PMID:32655601
Unique organization of photosystem II supercomplexes and megacomplexes in Norway spruce.
PMID:32654240
Identification of host factors limiting the overexpression of recombinant Cu, Zn superoxide dismutase in Escherichia coli.
PMID:32651703
Dynamic palmitoylation events following T-cell receptor signaling.
PMID:32651440
Nuclear moonlighting of cytosolic glyceraldehyde-3-phosphate dehydrogenase regulates Arabidopsis response to heat stress.
PMID:32651385
Optimisation of Sporosori Purification and Protein Extraction Techniques for the Biotrophic Protozoan Plant Pathogen Spongospora subterranea.
PMID:32650423
Stimulation of glycolysis promotes cardiomyocyte proliferation after injury in adult zebrafish.
PMID:32648304
INTS10-INTS13-INTS14 form a functional module of Integrator that binds nucleic acids and the cleavage module.
PMID:32647223
Cathepsin A contributes to left ventricular remodeling by degrading extracellular superoxide dismutase in mice.
PMID:32647007
Global discovery of bacterial RNA-binding proteins by RNase-sensitive gradient profiles reports a new FinO domain protein.
PMID:32646969
The Global Phosphorylation Landscape of SARS-CoV-2 Infection.
PMID:32645325
Deciphering and predicting CD4+ T cell immunodominance of influenza virus hemagglutinin.
PMID:32644114
Alternative splicing of clathrin heavy chain contributes to the switch from coated pits to plaques.
PMID:32642759
Phosphoproteomic quantitation and causal analysis reveal pathways in GPVI/ITAM-mediated platelet activation programs.
PMID:32640021
Visualisation tools for dependent peptide searches to support the exploration of in vitro protein modifications.
PMID:32639981
Mutations in the exocyst component EXOC2 cause severe defects in human brain development.
PMID:32639540
The liver matrisome - looking beyond collagens.
PMID:32637906
Simple Method to Quantify Protein Abundances from 1000 Cells.
PMID:32637829
CCPRD: A Novel Analytical Framework for the Comprehensive Proteomic Reference Database Construction of NonModel Organisms.
PMID:32637811
Data set of the proteome of fresh and frozen thawed stallion spermatozoa.
PMID:32637494
Characterization of cell-free breast cancer patient-derived scaffolds using liquid chromatography-mass spectrometry/mass spectrometry data and RNA sequencing data.
PMID:32637480
Systems biology of acidophile biofilms for efficient metal extraction.
PMID:32636389
Epitope Shaving Promotes Fungal Immune Evasion.
PMID:32636248
C5a impairs phagosomal maturation in the neutrophil through phosphoproteomic remodeling.
PMID:32634128
Identification of targets of AMPylating Fic enzymes by co-substrate-mediated covalent capture.
PMID:32632184
Proteomic Profiling of Emiliania huxleyi Using a Three-Dimensional Separation Method Combined with Tandem Mass Spectrometry.
PMID:32630776
Isolation and Characterization of Extracellular Vesicles Secreted In Vitro by Porcine Microbiota.
PMID:32630095
Impact of Different Trace Elements on the Growth and Proteome of Two Strains of Granulicella, Class "Acidobacteriia".
PMID:32625179
CASC3 promotes transcriptome-wide activation of nonsense-mediated decay by the exon junction complex.
PMID:32621609
TMEM16K is an interorganelle regulator of endosomal sorting.
PMID:32620747
Ultra-High-Throughput Clinical Proteomics Reveals Classifiers of COVID-19 Infection.
PMID:32619549
Shotgun proteomics analysis of SARS-CoV-2-infected cells and how it can optimize whole viral particle antigen production for vaccines.
PMID:32619390
Anti-inflammatory functions of the glucocorticoid receptor require DNA binding.
PMID:32619221
Profiling of myristoylation in Toxoplasma gondii reveals an N-myristoylated protein important for host cell penetration.
PMID:32618271
Interaction mapping of endoplasmic reticulum ubiquitin ligases identifies modulators of innate immune signalling.
PMID:32614325
Methyltransferase-like 21C (METTL21C) methylates alanine tRNA synthetase at Lys-943 in muscle tissue.
PMID:32611769
RNA aptamer capture of macromolecular complexes for mass spectrometry analysis.
PMID:32609809
CD209L/L-SIGN and CD209/DC-SIGN act as receptors for SARS-CoV-2.
PMID:32607506
An emerging role for cyclic dinucleotide phosphodiesterase and nanoRNase activities in Mycoplasma bovis: Securing survival in cell culture.
PMID:32598377
N-glycomic profiling of colorectal cancer according to tumor stage and location.
PMID:32598367
The level of putative carotenoid-binding proteins determines the body color in two species of endemic Lake Baikal amphipods.
PMID:32596057
Concurrent EPA and DHA Supplementation Impairs Brown Adipogenesis of C2C12 Cells.
PMID:32595696
The lipid transfer properties of CETP define the concentration and composition of plasma lipoproteins.
PMID:32591337
System-wide biochemical analysis reveals ozonide antimalarials initially act by disrupting Plasmodium falciparum haemoglobin digestion.
PMID:32589689
Alterations in the chondrocyte surfaceome in response to pro-inflammatory cytokines.
PMID:32586320
Phloem Exudate Protein Profiles during Drought and Recovery Reveal Abiotic Stress Responses in Tomato Vasculature.
PMID:32586033
Topological features of integrin adhesion complexes revealed by multiplexed proximity biotinylation.
PMID:32585685
Control of mRNA translation by dynamic ribosome modification.
PMID:32584816
The Immunomodulatory Signature of Extracellular Vesicles From Cardiosphere-Derived Cells: A Proteomic and miRNA Profiling.
PMID:32582685
Mobilization and Cellular Distribution of Phosphate in the Diatom Phaeodactylum tricornutum.
PMID:32582227
Effect of Nitrosative Stress on the S-Nitroso-Proteome of Paracoccidioides brasiliensis.
PMID:32582109
Immunoreactive Proteins in the Esophageal Gland Cells of Anisakis Simplex Sensu Stricto Detected by MALDI-TOF/TOF Analysis.
PMID:32580523
The kinase Isr1 negatively regulates hexosamine biosynthesis in S. cerevisiae.
PMID:32579556
Open Database Searching Enables the Identification and Comparison of Bacterial Glycoproteomes without Defining Glycan Compositions Prior to Searching.
PMID:32576591
Top-Down Proteomics of Human Saliva Discloses Significant Variations of the Protein Profile in Patients with Mastocytosis.
PMID:32575983
Pilot Multi-Omic Analysis of Human Bile from Benign and Malignant Biliary Strictures: A Machine-Learning Approach.
PMID:32575903
Moyamoya disease factor RNF213 is a giant E3 ligase with a dynein-like core and a distinct ubiquitin-transfer mechanism.
PMID:32573437
Tau molecular diversity contributes to clinical heterogeneity in Alzheimer's disease.
PMID:32572268
Structural mechanism underlying primary and secondary coupling between GPCRs and the Gi/o family.
PMID:32572026
Chimeric design of pyrrolysyl-tRNA synthetase/tRNA pairs and canonical synthetase/tRNA pairs for genetic code expansion.
PMID:32572025
MtcB, a member of the MttB superfamily from the human gut acetogen Eubacterium limosum, is a cobalamin-dependent carnitine demethylase.
PMID:32571881
Mitochondrial CLPP2 Assists Coordination and Homeostasis of Respiratory Complexes.
PMID:32571844
Secretome Analysis of Mesenchymal Stem Cell Factors Fostering Oligodendroglial Differentiation of Neural Stem Cells In Vivo.
PMID:32570968
Proteomics Profiling of KAIMRC1 in Comparison to MDA-MB231 and MCF-7.
PMID:32570693
Mass Spectrometric Identification of SARS-CoV-2 Proteins from Gargle Solution Samples of COVID-19 Patients.
PMID:32568543
Pulsed SILAM Reveals In Vivo Dynamics of Murine Brain Protein Translation.
PMID:32566817
Holistic engineering of cell-free systems through proteome-reprogramming synthetic circuits.
PMID:32561745
Mass spectrometry reveals the chemistry of formaldehyde cross-linking in structured proteins.
PMID:32561732
The Archaeal Proteome Project advances knowledge about archaeal cell biology through comprehensive proteomics.
PMID:32561711
The guanine nucleotide exchange factor VAV3 participates in ERBB4-mediated cancer cell migration.
PMID:32561640
Long-Term Phenotypic and Proteomic Changes Following Vitrified Embryo Transfer in the Rabbit Model.
PMID:32560425
Laser capture microdissection in combination with mass spectrometry: Approach to characterization of tissue-specific proteomes of Eudiplozoon nipponicum (Monogenea, Polyopisthocotylea).
PMID:32555742
Dynamic RNA acetylation revealed by quantitative cross-evolutionary mapping.
PMID:32555463
The bovine cumulus proteome is influenced by maturation condition and maturational competence of the oocyte.
PMID:32555221
The final assembly of trehalose polyphleates takes place within the outer layer of the mycobacterial cell envelope.
PMID:32554804
The Insulin Receptor Adaptor IRS2 is an APC/C Substrate That Promotes Cell Cycle Protein Expression and a Robust Spindle Assembly Checkpoint.
PMID:32554797
Multi-omics analysis delineates the distinct functions of sub-cellular acetyl-CoA pools in Toxoplasma gondii.
PMID:32546260
Proteomic Profiling of Retinoblastoma-Derived Exosomes Reveals Potential Biomarkers of Vitreous Seeding.
PMID:32545553
Proteomic analysis enables distinction of early- versus advanced-stage lung adenocarcinomas.
PMID:32536039
Nuclear interacting SET domain protein 1 inactivation impairs GATA1-regulated erythroid differentiation and causes erythroleukemia.
PMID:32533074
Proteomic Analysis of Myocardia Containing the Obscurin R4344Q Mutation Linked to Hypertrophic Cardiomyopathy.
PMID:32528308
Ablation of the miRNA Cluster 24 Has Profound Effects on Extracellular Matrix Protein Abundance in Cartilage.
PMID:32526967
NAguideR: performing and prioritizing missing value imputations for consistent bottom-up proteomic analyses.
PMID:32526036
CALCOCO1 acts with VAMP-associated proteins to mediate ER-phagy.
PMID:32525583
FBXL4 deficiency increases mitochondrial removal by autophagy.
PMID:32525278
A multi-omics analysis reveals the unfolded protein response regulon and stress-induced resistance to folate-based antimetabolites.
PMID:32522993
Restriction of essential amino acids dictates the systemic metabolic response to dietary protein dilution.
PMID:32518324
The Novel J-Domain Protein Mrj1 Is Required for Mitochondrial Respiration and Virulence in Cryptococcus neoformans.
PMID:32518190
NAP1-RELATED PROTEIN1 and 2 negatively regulate H2A.Z abundance in chromatin in Arabidopsis.
PMID:32513971
The effect of phytoglobin overexpression on the plant proteome during nonhost response of barley (Hordeum vulgare) to wheat powdery mildew (Blumeria graminis f. sp. tritici).
PMID:32513937
The Progression of Acute Myeloid Leukemia from First Diagnosis to Chemoresistant Relapse: A Comparison of Proteomic and Phosphoproteomic Profiles.
PMID:32512867
SAMHD1-mediated dNTP degradation is required for efficient DNA repair during antibody class switch recombination.
PMID:32511795
Fibrillar Aβ triggers microglial proteome alterations and dysfunction in Alzheimer mouse models.
PMID:32510331
Chemical Penetration Enhancers Increase Hydrogen Peroxide Uptake in C. elegans for In Vivo Fast Photochemical Oxidation of Proteins.
PMID:32506919
Comparative Target Analysis of Chlorinated Biphenyl Antimicrobials Highlights MenG as a Molecular Target of Triclocarban.
PMID:32503913
Use of the Polo-like kinase 4 (PLK4) inhibitor centrinone to investigate intracellular signalling networks using SILAC-based phosphoproteomics.
PMID:32501498
Optimal Dissociation Methods Differ for N- and O-Glycopeptides.
PMID:32500713
The Mi-2 nucleosome remodeler and the Rpd3 histone deacetylase are involved in piRNA-guided heterochromatin formation.
PMID:32499524
The iron-regulated surface determinant B (IsdB) protein from Staphylococcus aureus acts as a receptor for the host protein vitronectin.
PMID:32499371
Identification of TUBB2A by quantitative proteomic analysis as a novel biomarker for the prediction of distant metastatic breast cancer.
PMID:32489334
Increased immunocompetence and network centrality of allogroomer workers suggest a link between individual and social immunity in honeybees.
PMID:32488140
Plasma-derived extracellular vesicles from Plasmodium vivax patients signal spleen fibroblasts via NF-kB facilitating parasite cytoadherence.
PMID:32487994
Master Sculptor at Work: Enteropathogenic Escherichia coli Infection Uniquely Modifies Mitochondrial Proteolysis during Its Control of Human Cell Death.
PMID:32487743
The protein kinase PknB negatively regulates biosynthesis and trafficking of mycolic acids in mycobacteria.
PMID:32487543
Low Doses of Arsenic in a Mouse Model of Human Exposure and in Neuronal Culture Lead to S-Nitrosylation of Synaptic Proteins and Apoptosis via Nitric Oxide.
PMID:32486366
Mass Spectrometry-Based Characterization of the Virion Proteome, Phosphoproteome, and Associated Kinase Activity of Human Cytomegalovirus.
PMID:32486127
Pan-Proteomic Analysis and Elucidation of Protein Abundance among the Closely Related Brucella Species, Brucella abortus and Brucella melitensis.
PMID:32486122
Age-Related Changes in Hair Shaft Protein Profiling and Genetically Variant Peptides.
PMID:32485593
Proteome profiling in cerebrospinal fluid reveals novel biomarkers of Alzheimer's disease.
PMID:32485097
DICER regulates the expression of major satellite repeat transcripts and meiotic chromosome segregation during spermatogenesis.
PMID:32484548
Proteome and transcriptome reveal the involvement of heat shock proteins and antioxidant system in thermotolerance of Clematis florida.
PMID:32483281
Long noncoding RNA SAM promotes myoblast proliferation through stabilizing Sugt1 and facilitating kinetochore assembly.
PMID:32483152
Defective NADPH production in mitochondrial disease complex I causes inflammation and cell death.
PMID:32483148
A Comparative Quantitative Proteomic Analysis of HCMV-Infected Cells Highlights pUL138 as a Multifunctional Protein.
PMID:32481657
Airway Exosomes Released During Influenza Virus Infection Serve as a Key Component of the Antiviral Innate Immune Response.
PMID:32477358
Empowering Shotgun Mass Spectrometry with 2DE: A HepG2 Study.
PMID:32471280
Development and Validation of an in-House Library of Colombian Candida auris Strains with MALDI-TOF MS to Improve Yeast Identification.
PMID:32471074
The Mouse Heart Mitochondria N Terminome Provides Insights into ClpXP-Mediated Proteolysis.
PMID:32467259
Shortlisting SARS-CoV-2 Peptides for Targeted Studies from Experimental Data-Dependent Acquisition Tandem Mass Spectrometry Data.
PMID:32462744
Ensuring meiotic DNA break formation in the mouse pseudoautosomal region.
PMID:32461690
Acyltransferase-mediated selection of the length of the fatty acyl chain and of the acylation site governs activation of bacterial RTX toxins.
PMID:32461253
Quantitative analysis of Y-Chromosome gene expression across 36 human tissues.
PMID:32461223
Itch attenuates CD4 T-cell proliferation in mice by limiting WBP2 protein stability.
PMID:32459862
Metabolic Insights Into Infochemicals Induced Colony Formation and Flocculation in Scenedesmus subspicatus Unraveled by Quantitative Proteomics.
PMID:32457714
A novel bacterial thiosulfate oxidation pathway provides a new clue about the formation of zero-valent sulfur in deep sea.
PMID:32457501
Long non-coding RNA LASSIE regulates shear stress sensing and endothelial barrier function.
PMID:32457386
APN-mediated phosphorylation of BCKDK promotes hepatocellular carcinoma metastasis and proliferation via the ERK signaling pathway.
PMID:32457292
Lon Protease Is Important for Growth Under Stressful Conditions and Pathogenicity of the Phytopathogen, Bacterium Dickeya solani.
PMID:32456249
Integrin α3β1 on Tumor Keratinocytes Is Essential to Maintain Tumor Growth and Promotes a Tumor-Supportive Keratinocyte Secretome.
PMID:32454065
Proteomics of intracellular freezing survival.
PMID:32453791
Viral hijacking of the TENT4-ZCCHC14 complex protects viral RNAs via mixed tailing.
PMID:32451488
The ubiquitin-conjugating enzyme UBE2K determines neurogenic potential through histone H3 in human embryonic stem cells.
PMID:32451438
Identification of Tumor Antigens in the HLA Peptidome of Patient-derived Xenograft Tumors in Mouse.
PMID:32451349
SERRATE interacts with the nuclear exosome targeting (NEXT) complex to degrade primary miRNA precursors in Arabidopsis.
PMID:32449937
Phosphoproteomics identifies dual-site phosphorylation in an extended basophilic motif regulating FILIP1-mediated degradation of filamin-C.
PMID:32444788
Instrument Logic Increases Identifications during Mutliplexed Translatome Measurements.
PMID:32442378
Proteome Cold-Shock Response in the Extremely Acidophilic Archaeon, Cuniculiplasma divulgatum.
PMID:32438588
Changes in the Oligodendrocyte Progenitor Cell Proteome with Ageing.
PMID:32434922
Cdh1-APC Regulates Protein Synthesis and Stress Granules in Neurons through an FMRP-Dependent Mechanism.
PMID:32434143
TASL is the SLC15A4-associated adaptor for IRF5 activation by TLR7-9.
PMID:32433612
Overcoming off-targets: assessing Western blot signals for Bcnt/Cfdp1, a tentative component of the chromatin remodeling complex.
PMID:32432658
Single or Combined Dietary Supply of Psidium guajava and Phyllanthus amarus Extracts Differentially Modulate Immune Responses and Liver Proteome in Striped Catfish (Pangasianodon hyphophthalmus).
PMID:32431710
Dynamic Transcriptomic and Phosphoproteomic Analysis During Cell Wall Stress in Aspergillus nidulans.
PMID:32430394
Characterising ISWI chromatin remodeler in Trypanosoma cruzi.
PMID:32428081
RasGRP1 is a causal factor in the development of l-DOPA-induced dyskinesia in Parkinson's disease.
PMID:32426479
PolySTest: Robust Statistical Testing of Proteomics Data with Missing Values Improves Detection of Biologically Relevant Features.
PMID:32424025
Che-1/AATF binds to RNA polymerase I machinery and sustains ribosomal RNA gene transcription.
PMID:32421830
TMT-based quantitative proteomics analysis reveals the attenuated replication mechanism of Newcastle disease virus caused by nuclear localization signal mutation in viral matrix protein.
PMID:32420802
Toward a Universal Sample Preparation Method for Denaturing Top-Down Proteomics of Complex Proteomes.
PMID:32419461
Comprehensive Comparison of Clinically Relevant Grain Proteins in Modern and Traditional Bread Wheat Cultivars.
PMID:32414116
Glycopeptide Biomarkers in Serum Haptoglobin for Hepatocellular Carcinoma Detection in Patients with Nonalcoholic Steatohepatitis.
PMID:32412768
Proteolysis of Gingival Keratinocyte Cell Surface Proteins by Gingipains Secreted From Porphyromonas gingivalis - Proteomic Insights Into Mechanisms Behind Tissue Damage in the Diseased Gingiva.
PMID:32411104
Differential responses to kinase inhibition in FGFR2-addicted triple negative breast cancer cells: a quantitative phosphoproteomics study.
PMID:32409632
Exercise-dependent increases in protein synthesis are accompanied by chromatin modifications and increased MRTF-SRF signalling.
PMID:32408395
Proteomics of SARS-CoV-2-infected host cells reveals therapy targets.
PMID:32408336
Exercise training reverses cancer-induced oxidative stress and decrease in muscle COPS2/TRIP15/ALIEN.
PMID:32408015
The CEP5 Peptide Promotes Abiotic Stress Tolerance, As Revealed by Quantitative Proteomics, and Attenuates the AUX/IAA Equilibrium in Arabidopsis.
PMID:32404488
Protease-resistant streptavidin for interaction proteomics.
PMID:32400114
Platform independent protein-based cell-of-origin subtyping of diffuse large B-cell lymphoma in formalin-fixed paraffin-embedded tissue.
PMID:32398793
Structural venomics reveals evolution of a complex venom by duplication and diversification of an ancient peptide-encoding gene.
PMID:32398368
Urine Proteomic Study in OAB Patients-Preliminary Report.
PMID:32397227
Plasma-Derived Extracellular Vesicle Phosphoproteomics through Chemical Affinity Purification.
PMID:32396726
Isobaric Labeling Strategy Utilizing 4-Plex N,N-Dimethyl Leucine (DiLeu) Tags Reveals Proteomic Changes Induced by Chemotherapy in Cerebrospinal Fluid of Children with B-Cell Acute Lymphoblastic Leukemia.
PMID:32396724
Dataset on interactors of the Arabidopsis thaliana Plant Natriuretic Peptide (AtPNP-A) determined by mass spectrometry.
PMID:32395580
Retargeting from the CR3 to the LFA-1 receptor uncovers the adenylyl cyclase enzyme-translocating segment of Bordetella adenylate cyclase toxin.
PMID:32393579
Heterogeneity of proteome dynamics between connective tissue phases of adult tendon.
PMID:32393437
Insights into herpesvirus assembly from the structure of the pUL7:pUL51 complex.
PMID:32391791
Lactonase Specificity Is Key to Quorum Quenching in Pseudomonas aeruginosa.
PMID:32390993
An Azidoribose Probe to Track Ketoamine Adducts in Histone Ribose Glycation.
PMID:32390412
p85β regulates autophagic degradation of AXL to activate oncogenic signaling.
PMID:32385243
Differences and commonalities in plasma membrane recruitment of the two morphogenetically distinct retroviruses HIV-1 and MMTV.
PMID:32385109
Regulation of mRNA export through API5 and nuclear FGF2 interaction.
PMID:32383752
Discovery of Widespread Host Protein Interactions with the Pre-replicated Genome of CHIKV Using VIR-CLASP.
PMID:32380061
Impact of Increased FUT8 Expression on the Extracellular Vesicle Proteome in Prostate Cancer Cells.
PMID:32378902
Cystatin B is essential for proliferation and interneuron migration in individuals with EPM1 epilepsy.
PMID:32378798
Cryo-electron microscopy reveals two distinct type IV pili assembled by the same bacterium.
PMID:32376942
The omics discovery REST interface.
PMID:32374843
Comparison of a human neuronal model proteome upon Japanese encephalitis or West Nile Virus infection and potential role of mosquito saliva in neuropathogenesis.
PMID:32374750
PaACL silencing accelerates flower senescence and changes the proteome to maintain metabolic homeostasis in Petunia hybrida.
PMID:32364241
Protein markers for Candida albicans EVs include claudin-like Sur7 family proteins.
PMID:32363014
Integrative Proteome and Acetylome Analyses of Murine Responses to Cryptococcus neoformans Infection.
PMID:32362878
Inter-domain dynamics in the chaperone SurA and multi-site binding to its outer membrane protein clients.
PMID:32358557
Immunopeptidomic Analysis Reveals That Deamidated HLA-bound Peptides Arise Predominantly from Deglycosylated Precursors.
PMID:32357974
The cooperative action of CSB, CSA, and UVSSA target TFIIH to DNA damage-stalled RNA polymerase II.
PMID:32355176
Suramin exposure alters cellular metabolism and mitochondrial energy production in African trypanosomes.
PMID:32354742
Actinobacterial Degradation of 2-Hydroxyisobutyric Acid Proceeds via Acetone and Formyl-CoA by Employing a Thiamine-Dependent Lyase Reaction.
PMID:32351493
Region-Specific Proteome Changes of the Intestinal Epithelium during Aging and Dietary Restriction.
PMID:32348758
Normal murine respiratory tract has its mucus concentrated in clouds based on the Muc5b mucin.
PMID:32348677
The DNA Sensor cGAS is Decorated by Acetylation and Phosphorylation Modifications in the Context of Immune Signaling.
PMID:32345711
A Comprehensive Proteomic and Phosphoproteomic Analysis of Retinal Pigment Epithelium Reveals Multiple Pathway Alterations in Response to the Inflammatory Stimuli.
PMID:32344885
Comparative proteomics of three Giardia lamblia strains: investigation of antigenic variation in the post-genomic era.
PMID:32338227
Methylation of Salmonella Typhimurium flagella promotes bacterial adhesion and host cell invasion.
PMID:32332720
Flow-induced Reorganization of Laminin-integrin Networks Within the Endothelial Basement Membrane Uncovered by Proteomics.
PMID:32332107
A Cross-linking Mass Spectrometry Approach Defines Protein Interactions in Yeast Mitochondria.
PMID:32332106
S-Glutathionylation of human inducible Hsp70 reveals a regulatory mechanism involving the C-terminal α-helical lid.
PMID:32332101
Proteomic profiling analysis of postmenopausal osteoporosis and osteopenia identifies potential proteins associated with low bone mineral density.
PMID:32328356
Bump-and-Hole Engineering Identifies Specific Substrates of Glycosyltransferases in Living Cells.
PMID:32325029
The Flemmingsome reveals an ESCRT-to-membrane coupling via ALIX/syntenin/syndecan-4 required for completion of cytokinesis.
PMID:32321914
Partial loss of CFIm25 causes learning deficits and aberrant neuronal alternative polyadenylation.
PMID:32319885
Selective Maleylation-Directed Isobaric Peptide Termini Labeling for Accurate Proteome Quantification.
PMID:32319746
Pyruvate kinase variant of fission yeast tunes carbon metabolism, cell regulation, growth and stress resistance.
PMID:32319721
Cytochrome c M Decreases Photosynthesis under Photomixotrophy in Synechocystis sp. PCC 6803.
PMID:32317358
Potential Role of Circulating Endoglin in Hypertension via the Upregulated Expression of BMP4.
PMID:32316263
Plasticity of nuclear and cytoplasmic stress responses of RNA-binding proteins.
PMID:32313943
Hemocyte phagosomal proteome is dynamically shaped by cytoskeleton remodeling and interorganellar communication with endoplasmic reticulum during phagocytosis in a marine invertebrate, Crassostrea gigas.
PMID:32313134
Nitrogen limitation reveals large reserves in metabolic and translational capacities of yeast.
PMID:32312967
Inhibition of collagen XI alpha 1-induced fatty acid oxidation triggers apoptotic cell death in cisplatin-resistant ovarian cancer.
PMID:32312965
Tumor-associated macrophages promote ovarian cancer cell migration by secreting transforming growth factor beta induced (TGFBI) and tenascin C.
PMID:32312959
MASTL promotes cell contractility and motility through kinase-independent signaling.
PMID:32311005
Serial in-solution digestion protocol for mass spectrometry-based glycomics and proteomics analysis.
PMID:32309832
Structure-function analyses of the G729R 2-oxoadipate dehydrogenase genetic variant associated with a disorder of l-lysine metabolism.
PMID:32303640
The SHCA adapter protein cooperates with lipoma-preferred partner in the regulation of adhesion dynamics and invadopodia formation.
PMID:32299913
Identifying nucleic acid-associated proteins in Mycobacterium smegmatis by mass spectrometry-based proteomics.
PMID:32293251
Antagonism of PP2A is an independent and conserved function of HIV-1 Vif and causes cell cycle arrest.
PMID:32292164
Characterisation of the biochemical and cellular roles of native and pathogenic amelogenesis imperfecta mutants of FAM83H.
PMID:32289446
Ribosome profiling at isoform level reveals evolutionary conserved impacts of differential splicing on the proteome.
PMID:32286305
Lipid moieties of Mycoplasma pneumoniae lipoproteins are the causative factor of vaccine-enhanced disease.
PMID:32284882
Unravelling the proteomic landscape of extracellular vesicles in prostate cancer by density-based fractionation of urine.
PMID:32284825
An exported kinase family mediates species-specific erythrocyte remodelling and virulence in human malaria.
PMID:32284562
Olaparib-Based Photoaffinity Probes for PARP-1 Detection in Living Cells.
PMID:32282108
Functional changes of the liver in the absence of growth hormone (GH) action - Proteomic and metabolomic insights from a GH receptor deficient pig model.
PMID:32277923
Identification of immune-related proteins of Dreissena polymorpha hemocytes and plasma involved in host-microbe interactions by differential proteomics.
PMID:32277127
ARID1A Regulates Transcription and the Epigenetic Landscape via POLE and DMAP1 while ARID1A Deficiency or Pharmacological Inhibition Sensitizes Germ Cell Tumor Cells to ATR Inhibition.
PMID:32272809
Identifying Sialylation Linkages at the Glycopeptide Level by Glycosyltransferase Labeling Assisted Mass Spectrometry (GLAMS).
PMID:32271005
Larval Geoduck (Panopea generosa) Proteomic Response to Ciliates.
PMID:32269285
Autophosphorylation at serine 166 regulates RIP kinase 1-mediated cell death and inflammation.
PMID:32269263
Primary Metabolism Is Distinctly Modulated by Plant Resistance Inducers in Coffea arabica Leaves Infected by Hemileia vastatrix.
PMID:32265962
Response of Midgut Trypsin- and Chymotrypsin-Like Proteases of Helicoverpa armigera Larvae Upon Feeding With Peanut BBI: Biochemical and Biophysical Characterization of PnBBI.
PMID:32265951
Exercise Training in Obese Rats Does Not Induce Browning at Thermoneutrality and Induces a Muscle-Like Signature in Brown Adipose Tissue.
PMID:32265830
Genetic Deletion of Zebrafish Rab28 Causes Defective Outer Segment Shedding, but Not Retinal Degeneration.
PMID:32258030
Differential Proteomic Analysis of Chinese Giant Salamander Liver in Response to Fasting.
PMID:32256382
Diversity in Aβ deposit morphology and secondary proteome insolubility across models of Alzheimer-type amyloidosis.
PMID:32252825
Fast and Highly Efficient Affinity Enrichment of Azide-A-DSBSO Cross-Linked Peptides.
PMID:32250121
Systems Analysis of NADH Dehydrogenase Mutants Reveals Flexibility and Limits of Pseudomonas taiwanensis VLB120's Metabolism.
PMID:32245760
A Bayesian Null Interval Hypothesis Test Controls False Discovery Rates and Improves Sensitivity in Label-Free Quantitative Proteomics.
PMID:32243168
The nanophthalmos protein TMEM98 inhibits MYRF self-cleavage and is required for eye size specification.
PMID:32236127
Immediate Adaptation Analysis Implicates BCL6 as an EGFR-TKI Combination Therapy Target in NSCLC.
PMID:32234966
Natural-Killer-Derived Extracellular Vesicles: Immune Sensors and Interactors.
PMID:32231660
Proteomics-Based Characterization of miR-574-5p Decoy to CUGBP1 Suggests Specificity for mPGES-1 Regulation in Human Lung Cancer Cells.
PMID:32231562
Integrative -omics and HLA-ligandomics analysis to identify novel drug targets for ccRCC immunotherapy.
PMID:32228647
Optimization of Synovial Fluid Collection and Processing for NMR Metabolomics and LC-MS/MS Proteomics.
PMID:32227958
Acute experimental infection of bats and ferrets with Hendra virus: Insights into the early host response of the reservoir host and susceptible model species.
PMID:32226041
Enhancing Top-Down Proteomics Data Analysis by Combining Deconvolution Results through a Machine Learning Strategy.
PMID:32223200
Calretinin is a novel candidate marker for adverse ovarian effects of early life exposure to mixtures of endocrine disruptors in the rat.
PMID:32221642
CD4+ Th immunogenicity of the Ascaris spp. secreted products.
PMID:32218997
Building blocks are synthesized on demand during the yeast cell cycle.
PMID:32213592
Loss of the Periplasmic Chaperone Skp and Mutations in the Efflux Pump AcrAB-TolC Play a Role in Acquired Resistance to Antimicrobial Peptides in Salmonella typhimurium.
PMID:32210923
ECE2 regulates neurogenesis and neuronal migration during human cortical development.
PMID:32207244
IL-23 signaling regulation of pro-inflammatory T-cell migration uncovered by phosphoproteomics.
PMID:32203518
Distinct roles for H4 and H2A.Z acetylation in RNA transcription in African trypanosomes.
PMID:32198348
Protein modification with ISG15 blocks coxsackievirus pathology by antiviral and metabolic reprogramming.
PMID:32195343
Exploring the HeLa Dark Mitochondrial Proteome.
PMID:32195257
Cardiopoietic stem cell therapy restores infarction-altered cardiac proteome.
PMID:32194990
Photoprotective Acclimation of the Arabidopsis thaliana Leaf Proteome to Fluctuating Light.
PMID:32194630
Proteome of a Moraxella catarrhalis Strain under Iron-Restricted Conditions.
PMID:32193234
Proteomic Analysis of Proteins Responsive to Drought and Low Temperature Stress in a Hard Red Spring Wheat Cultivar.
PMID:32192150
Membrane Modulation of Super-Secreting "midiBacillus" Expressing the Major Staphylococcus aureus Antigen - A Mass-Spectrometry-Based Absolute Quantification Approach.
PMID:32185169
Rhein, a novel Histone Deacetylase (HDAC) inhibitor with antifibrotic potency in human myocardial fibrosis.
PMID:32184434
Absolute yeast mitochondrial proteome quantification reveals trade-off between biosynthesis and energy generation during diauxic shift.
PMID:32184324
Proteomic Adaptation of Streptococcus pneumoniae to the Human Antimicrobial Peptide LL-37.
PMID:32183275
Multi-omic analysis of gametogenesis reveals a novel signature at the promoters and distal enhancers of active genes.
PMID:32182340
In-depth proteome analysis of more than 12,500 proteins in buffalo mammary epithelial cell line identifies protein signatures for active proliferation and lactation.
PMID:32179766
Common and Strain-Specific Post-Translational Modifications of the Potyvirus Plum pox virus Coat Protein in Different Hosts.
PMID:32178365
The alarmones (p)ppGpp are part of the heat shock response of Bacillus subtilis.
PMID:32176689
Isoform-resolved correlation analysis between mRNA abundance regulation and protein level degradation.
PMID:32175694
Cholesteryl α-D-glucoside 6-acyltransferase enhances the adhesion of Helicobacter pylori to gastric epithelium.
PMID:32170208
Plant Raf-like kinases regulate the mRNA population upstream of ABA-unresponsive SnRK2 kinases under drought stress.
PMID:32170072
A signaling hub of insulin receptor, dystrophin glycoprotein complex and plakoglobin regulates muscle size.
PMID:32170063
Fast and Robust Proteome Screening Platform Identifies Neutrophil Extracellular Trap Formation in the Lung in Response to Cobalt Ferrite Nanoparticles.
PMID:32167280
Impact of the gut microbiota on the m6A epitranscriptome of mouse cecum and liver.
PMID:32165618
Metabolic Rearrangements Causing Elevated Proline and Polyhydroxybutyrate Accumulation During the Osmotic Adaptation Response of Bacillus megaterium.
PMID:32161752
Reducing the Immunogenic Potential of Wheat Flour: Silencing of Alpha Gliadin Genes in a U.S. Wheat Cultivar.
PMID:32161604
Crystal structure of a lipin/Pah phosphatidic acid phosphatase.
PMID:32161260
Pharmacological induction of selective endoplasmic reticulum retention as a strategy for cancer therapy.
PMID:32161259
Fibroblast-specific genome-scale modelling predicts an imbalance in amino acid metabolism in Refsum disease.
PMID:32160399
Alterations of redox and iron metabolism accompany the development of HIV latency.
PMID:32157726
Rpn4 and proteasome-mediated yeast resistance to ethanol includes regulation of autophagy.
PMID:32157425
Integrated proteogenomic deep sequencing and analytics accurately identify non-canonical peptides in tumor immunopeptidomes.
PMID:32157095
MaxQuant Software for Ion Mobility Enhanced Shotgun Proteomics.
PMID:32156793
TAp63-Regulated miRNAs Suppress Cutaneous Squamous Cell Carcinoma through Inhibition of a Network of Cell-Cycle Genes.
PMID:32156775
Proteome data of serum samples from patients with schizophrenia.
PMID:32154357
Paradoxical mitotic exit induced by a small molecule inhibitor of APC/CCdc20.
PMID:32152539
Histone variant H3.3 residue S31 is essential for Xenopus gastrulation regardless of the deposition pathway.
PMID:32152320
TEX264 coordinates p97- and SPRTN-mediated resolution of topoisomerase 1-DNA adducts.
PMID:32152270
AIG1 and ADTRP are endogenous hydrolases of fatty acid esters of hydroxy fatty acids (FAHFAs) in mice.
PMID:32152231
The heme-regulatory motifs of heme oxygenase-2 contribute to the transfer of heme to the catalytic site for degradation.
PMID:32152224
Phosphorylation switches protein disulfide isomerase activity to maintain proteostasis and attenuate ER stress.
PMID:32149426
CLUH granules coordinate translation of mitochondrial proteins with mTORC1 signaling and mitophagy.
PMID:32149416
Synaptamide activates the adhesion GPCR GPR110 (ADGRF1) through GAIN domain binding.
PMID:32144388
Two distinct modes of DNMT1 recruitment ensure stable maintenance DNA methylation.
PMID:32144273
Tryp-N: A Thermostable Protease for the Production of N-terminal Argininyl and Lysinyl Peptides.
PMID:32141294
The Streptomyces coelicolor Small ORF trpM Stimulates Growth and Morphological Development and Exerts Opposite Effects on Actinorhodin and Calcium-Dependent Antibiotic Production.
PMID:32140146
Comparative Proteomics of Extended-Spectrum Cephalosporin-Resistant Neisseria gonorrhoeae Isolates Demonstrates Altered Protein Synthesis, Metabolism, Substance Transport, and Membrane Permeability.
PMID:32140142
Good Vibrations: Structural Remodeling of Maturing Yeast Pre-40S Ribosomal Particles Followed by Cryo-Electron Microscopy.
PMID:32138239
Histone H4 dosage modulates DNA damage response in the pathogenic yeast Candida glabrata via homologous recombination pathway.
PMID:32134928
The PIWI protein Aubergine recruits eIF3 to activate translation in the germ plasm.
PMID:32132673
Automated sample preparation with SP3 for low-input clinical proteomics.
PMID:32129943
Phosphorylation of multiple proteins involved in ciliogenesis by Tau Tubulin kinase 2.
PMID:32129703
Reciprocal transplantation of the heterotrophic coral Tubastraea coccinea (Scleractinia: Dendrophylliidae) between distinct habitats did not alter its venom toxin composition.
PMID:32128117
Plasmodium chaperonin TRiC/CCT identified as a target of the antihistamine clemastine using parallel chemoproteomic strategy.
PMID:32127489
Systematic Localization of Escherichia coli Membrane Proteins.
PMID:32127419
Quantitative proteomics to study aging in rabbit liver.
PMID:32126221
Cyp2c44 regulates prostaglandin synthesis, lymphangiogenesis, and metastasis in a mouse model of breast cancer.
PMID:32123095
Variability in protein cargo detection in technical and biological replicates of exosome-enriched extracellular vesicles.
PMID:32119684
The microtubule-associated histone methyltransferase SET8, facilitated by transcription factor LSF, methylates α-tubulin.
PMID:32111740
The tetraspanin Tspan15 is an essential subunit of an ADAM10 scissor complex.
PMID:32111735
A Quantitative Tissue-Specific Landscape of Protein Redox Regulation during Aging.
PMID:32109415
Re-Evaluating the Mechanism of Action of α,β-Unsaturated Carbonyl DUB Inhibitors b-AP15 and VLX1570: A Paradigmatic Example of Unspecific Protein Cross-linking with Michael Acceptor Motif-Containing Drugs.
PMID:32109059
Identification of Novel Prognosis and Prediction Markers in Advanced Prostate Cancer Tissues Based on Quantitative Proteomics.
PMID:32108042
Chemical Genetics of AGC-kinases Reveals Shared Targets of Ypk1, Protein Kinase A and Sch9.
PMID:32102971
A rare codon-based translational program of cell proliferation.
PMID:32102681
The Hypoxic Proteome and Metabolome of Barley (Hordeum vulgare L.) with and without Phytoglobin Priming.
PMID:32102473
Combination of chemotherapy and PD-1 blockade induces T cell responses to tumor non-mutated neoantigens.
PMID:32099064
Interactome of vertebrate GAF/ThPOK reveals its diverse functions in gene regulation and DNA repair.
PMID:32098917
Depletion of histone methyltransferase KMT9 inhibits lung cancer cell proliferation by inducing non-apoptotic cell death.
PMID:32095117
Functional omics analyses reveal only minor effects of microRNAs on human somatic stem cell differentiation.
PMID:32094412
Imipridone Anticancer Compounds Ectopically Activate the ClpP Protease and Represent a New Scaffold for Antibiotic Development.
PMID:32094149
Cytokine-Induced Guanylate Binding Protein 1 (GBP1) Release from Human Ovarian Cancer Cells.
PMID:32093058
Quantitative proteomics analysis reveals important roles of N-glycosylation on ER quality control system for development and pathogenesis in Magnaporthe oryzae.
PMID:32092131
Identification of osteolineage cell-derived extracellular vesicle cargo implicated in hematopoietic support.
PMID:32086861
Conformation-specific inhibitors of activated Ras GTPases reveal limited Ras dependency of patient-derived cancer organoids.
PMID:32086379
Hat1-Dependent Lysine Acetylation Targets Diverse Cellular Functions.
PMID:32081014
The Relevance of Thimet Oligopeptidase in the Regulation of Energy Metabolism and Diet-Induced Obesity.
PMID:32079362
Pro-inflammatory activation following demyelination is required for myelin clearance and oligodendrogenesis.
PMID:32078678
The Secretome Profiling of a Pediatric Airway Epithelium Infected with hRSV Identified Aberrant Apical/Basolateral Trafficking and Novel Immune Modulating (CXCL6, CXCL16, CSF3) and Antiviral (CEACAM1) Proteins.
PMID:32075873
hipBA toxin-antitoxin systems mediate persistence in Caulobacter crescentus.
PMID:32071324
Structural insights into the main S-layer unit of Deinococcus radiodurans reveal a massive protein complex with porin-like features.
PMID:32071085
Identification of proteins from the secretory/excretory products (SEPs) of the branchiuran ectoparasite Argulus foliaceus (Linnaeus, 1758) reveals unique secreted proteins amongst haematophagous ecdysozoa.
PMID:32070416
Germ-free and microbiota-associated mice yield small intestinal epithelial organoids with equivalent and robust transcriptome/proteome expression phenotypes.
PMID:32068945
FANCD2-FANCI is a clamp stabilized on DNA by monoubiquitination of FANCD2 during DNA repair.
PMID:32066963
A genetic analysis reveals novel histone residues required for transcriptional reprogramming upon stress.
PMID:32064518
CEP44 ensures the formation of bona fide centriole wall, a requirement for the centriole-to-centrosome conversion.
PMID:32060285
Inference of Multisite Phosphorylation Rate Constants and Their Modulation by Pathogenic Mutations.
PMID:32059766
Comparative milk proteome analysis of Kashmiri and Jersey cattle identifies differential expression of key proteins involved in immune system regulation and milk quality.
PMID:32059637
Responses of Acidobacteria Granulicella sp. WH15 to High Carbon Revealed by Integrated Omics Analyses.
PMID:32059463
Comprehensive Proteomic Characterization Reveals Subclass-Specific Molecular Aberrations within Triple-negative Breast Cancer.
PMID:32058975
Label-free quantitative proteomic analysis of M. longissimus dorsi from cattle during dietary restriction and subsequent compensatory growth.
PMID:32054912
Cross-talks of glycosylphosphatidylinositol biosynthesis with glycosphingolipid biosynthesis and ER-associated degradation.
PMID:32054864
Insights into the Functions of eIF4E-Biding Motif of VPg in Potato Virus A Infection.
PMID:32053987
Improving Identification of In-organello Protein-Protein Interactions Using an Affinity-enrichable, Isotopically Coded, and Mass Spectrometry-cleavable Chemical Crosslinker.
PMID:32051233
Quantitative Proteomics to Identify Nuclear RNA-Binding Proteins of Malat1.
PMID:32050583
Time-resolved proteomic profile of Amblyomma americanum tick saliva during feeding.
PMID:32049966
Nucleolar localization of RAG1 modulates V(D)J recombination activity.
PMID:32047031
Role for ribosome-associated quality control in sampling proteins for MHC class I-mediated antigen presentation.
PMID:32047030
Proteome Analysis of Isolated Podocytes Reveals Stress Responses in Glomerular Sclerosis.
PMID:32047005
Predicting Electrophoretic Mobility of Proteoforms for Large-Scale Top-Down Proteomics.
PMID:32043875
Opposing effects of polysulfides and thioredoxin on apoptosis through caspase persulfidation.
PMID:32041780
Respiratory chain signalling is essential for adaptive remodelling following cardiac ischaemia.
PMID:32040259
Structural Basis for Lipid Binding and Function by an Evolutionarily Conserved Protein, Serum Amyloid A.
PMID:32035904
Assessment of separation methods for extracellular vesicles from human and mouse brain tissues and human cerebrospinal fluids.
PMID:32035230
Gastric bypass surgery in a rat model alters the community structure and functional composition of the intestinal microbiota independently of weight loss.
PMID:32033593
Defining the Adult Neural Stem Cell Niche Proteome Identifies Key Regulators of Adult Neurogenesis.
PMID:32032526
Posttranslational Modifications Mediate the Structural Diversity of Tauopathy Strains.
PMID:32032505
A synthetic peptide library for benchmarking crosslinking-mass spectrometry search engines for proteins and protein complexes.
PMID:32029734
Accurate and Sensitive Quantitation of the Dynamic Heat Shock Proteome Using Tandem Mass Tags.
PMID:32027144
Listeria monocytogenes Exploits Mitochondrial Contact Site and Cristae Organizing System Complex Subunit Mic10 To Promote Mitochondrial Fragmentation and Cellular Infection.
PMID:32019800
Combined Proteomics and Metabolism Analysis Unravels Prominent Roles of Antioxidant System in the Prevention of Alfalfa (Medicago sativa L.) against Salt Stress.
PMID:32019165
IL8 and PMA Trigger the Regulation of Different Biological Processes in Granulocyte Activation.
PMID:32010136
How to Cope With Heavy Metal Ions: Cellular and Proteome-Level Stress Response to Divalent Copper and Nickel in Halobacterium salinarum R1 Planktonic and Biofilm Cells.
PMID:32010107
The tight junction protein TJP1 regulates the feeding-modulated hepatic circadian clock.
PMID:32001717
A LysR-Type Transcriptional Regulator LcrX Is Involved in Virulence, Biofilm Formation, Swimming Motility, Siderophore Secretion, and Growth in Sugar Sources in Xanthomonas axonopodis Pv. glycines.
PMID:31998344
Metabolic syndrome diminishes insulin-induced Akt activation and causes a redistribution of Akt-interacting proteins in cardiomyocytes.
PMID:31995605
Biomarker discovery for chronic liver diseases by multi-omics - a preclinical case study.
PMID:31992752
Cuticular Structure Proteomics in the Pea Aphid Acyrthosiphon pisum Reveals New Plant Virus Receptor Candidates at the Tip of Maxillary Stylets.
PMID:31991085
Dynamic response in the larval geoduck (Panopea generosa) proteome to elevated pCO2.
PMID:31988722
Somatic gene editing ameliorates skeletal and cardiac muscle failure in pig and human models of Duchenne muscular dystrophy.
PMID:31988462
A precisely positioned MED12 activation helix stimulates CDK8 kinase activity.
PMID:31988137
Endothelial progeria induces adipose tissue senescence and impairs insulin sensitivity through senescence associated secretory phenotype.
PMID:31980643
The Antimalarial Natural Product Salinipostin A Identifies Essential α/β Serine Hydrolases Involved in Lipid Metabolism in P. falciparum Parasites.
PMID:31978322
EPIFANY: A Method for Efficient High-Confidence Protein Inference.
PMID:31975601
Mechanism of adrenergic CaV1.2 stimulation revealed by proximity proteomics.
PMID:31969708
Mechanisms governing the pioneering and redistribution capabilities of the non-classical pioneer PU.1.
PMID:31964861
Staphylococcus saprophyticus Proteomic Analyses Elucidate Differences in the Protein Repertories among Clinical Strains Related to Virulence and Persistence.
PMID:31963821
A Combined Proteomics, Metabolomics and In Vivo Analysis Approach for the Characterization of Probiotics in Large-Scale Production.
PMID:31963736
A human ciliopathy reveals essential functions for NEK10 in airway mucociliary clearance.
PMID:31959991
Targeting of EGFR by a combination of antibodies mediates unconventional EGFR trafficking and degradation.
PMID:31959764
Identification of dual histone modification-binding protein interaction by combining mass spectrometry and isothermal titration calorimetric analysis.
PMID:31956440
Quantitative Proteomics of the Endothelial Secretome Identifies RC0497 as Diagnostic of Acute Rickettsial Spotted Fever Infections.
PMID:31955791
Bacterial Hsp70 resolves misfolded states and accelerates productive folding of a multi-domain protein.
PMID:31953415
Dynamic post-translational modification profiling of Mycobacterium tuberculosis-infected primary macrophages.
PMID:31951200
The ELIXIR Core Data Resources: fundamental infrastructure for the life sciences.
PMID:31950984
Gigaxonin glycosylation regulates intermediate filament turnover and may impact giant axonal neuropathy etiology or treatment.
PMID:31944090
Combined Expression of Plasma Thrombospondin-2 and CA19-9 for Diagnosis of Pancreatic Cancer and Distal Cholangiocarcinoma: A Proteome Approach.
PMID:31943574
Identification of Chloroplast Envelope Proteins with Critical Importance for Cold Acclimation.
PMID:31932409
Rhomboid intramembrane protease YqgP licenses bacterial membrane protein quality control as adaptor of FtsH AAA protease.
PMID:31930742
FAM134B oligomerization drives endoplasmic reticulum membrane scission for ER-phagy.
PMID:31930741
Proteomic Analysis of MYB-Regulated Secretome Identifies Functional Pathways and Biomarkers: Potential Pathobiological and Clinical Implications.
PMID:31928012
Proteomic Analysis of CSF from Patients with Leptomeningeal Melanoma Metastases Identifies Signatures Associated with Disease Progression and Therapeutic Resistance.
PMID:31924735
Multiple Layers of Phospho-Regulation Coordinate Metabolism and the Cell Cycle in Budding Yeast.
PMID:31921850
Adipocyte extracellular vesicles carry enzymes and fatty acids that stimulate mitochondrial metabolism and remodeling in tumor cells.
PMID:31919869
Robust, reproducible and quantitative analysis of thousands of proteomes by micro-flow LC-MS/MS.
PMID:31919466
Architecture of The Human Ape1 Interactome Defines Novel Cancers Signatures.
PMID:31913336
Treacle controls the nucleolar response to rDNA breaks via TOPBP1 recruitment and ATR activation.
PMID:31913317
Improved Single-Cell Proteome Coverage Using Narrow-Bore Packed NanoLC Columns and Ultrasensitive Mass Spectrometry.
PMID:31913019
Twin enzymes, divergent control: The cholesterogenic enzymes DHCR14 and LBR are differentially regulated transcriptionally and post-translationally.
PMID:31911440
The plastidial Arabidopsis thaliana NFU1 protein binds and delivers [4Fe-4S] clusters to specific client proteins.
PMID:31911438
Proteome dataset of mouse macrophage cell line infected with tick-borne encephalitis virus.
PMID:31909125
Disrupted ER membrane protein complex-mediated topogenesis drives congenital neural crest defects.
PMID:31904590
Cell-specific non-canonical amino acid labelling identifies changes in the de novo proteome during memory formation.
PMID:31904341
Quantitative Proteomics Reveal an Altered Pattern of Protein Expression in Brain Tissue from Mice Lacking GPR37 and GPR37L1.
PMID:31903766
Polar recruitment of RLD by LAZY1-like protein during gravity signaling in root branch angle control.
PMID:31900388
Mass spectrometry-based selectivity profiling identifies a highly selective inhibitor of the kinase MELK that delays mitotic entry in cancer cells.
PMID:31896573
Development of a Retinal-Based Probe for the Profiling of Retinaldehyde Dehydrogenases in Cancer Cells.
PMID:31893226
LINE-1 ORF2p expression is nearly imperceptible in human cancers.
PMID:31892958
A sulfur-containing volatile emitted by potato-associated bacteria confers protection against late blight through direct anti-oomycete activity.
PMID:31889050
Heat-induced hyperthermia impacts the follicular fluid proteome of the periovulatory follicle in lactating dairy cows.
PMID:31887207
R2-P2 rapid-robotic phosphoproteomics enables multidimensional cell signaling studies.
PMID:31885202
Quantitative Proteome Responses to Oncolytic Reovirus in GM-CSF- and M-CSF-Differentiated Bone Marrow-Derived Cells.
PMID:31884793
Fetal androgen exposure is a determinant of adult male metabolic health.
PMID:31882954
Analysis of Soybean Long Non-Coding RNAs Reveals a Subset of Small Peptide-Coding Transcripts.
PMID:31882456
Pressure Cycling Technology Assisted Mass Spectrometric Quantification of Gingival Tissue Reveals Proteome Dynamics during the Initiation and Progression of Inflammatory Periodontal Disease.
PMID:31881116
Absolute proteomic quantification reveals design principles of sperm flagellar chemosensation.
PMID:31880004
Signature-Ion-Triggered Mass Spectrometry Approach Enabled Discovery of N- and O-Linked Glycosylated Neuropeptides in the Crustacean Nervous System.
PMID:31875397
Lymphatic remodelling in response to lymphatic injury in the hind limbs of sheep.
PMID:31873209
Identification of HCMV-derived T cell epitopes in seropositive individuals through viral deletion models.
PMID:31869419
ODF1, sperm flagelar protein is expressed in kidney collecting ducts of rats.
PMID:31867458
Label-Free Proteomic Approach to Study the Non-lethal Effects of Silver Nanoparticles on a Gut Bacterium.
PMID:31866956
Pathogenic Bi-allelic Mutations in NDUFAF8 Cause Leigh Syndrome with an Isolated Complex I Deficiency.
PMID:31866046
A mitochondrial megachannel resides in monomeric F1FO ATP synthase.
PMID:31862883
Comparative profiling of the synaptic proteome from Alzheimer's disease patients with focus on the APOE genotype.
PMID:31862015
Analog-sensitive cell line identifies cellular substrates of CDK9.
PMID:31857848
Lipid droplet-associated kinase STK25 regulates peroxisomal activity and metabolic stress response in steatotic liver.
PMID:31857389
NIMA-related kinase 9-mediated phosphorylation of the microtubule-associated LC3B protein at Thr-50 suppresses selective autophagy of p62/sequestosome 1.
PMID:31857374
Prolonged fasting followed by refeeding modifies proteome profile and parvalbumin expression in the fast-twitch muscle of pacu (Piaractus mesopotamicus).
PMID:31856193
Dynamic Growth and Shrinkage of the Salmonella-Containing Vacuole Determines the Intracellular Pathogen Niche.
PMID:31851926
TULIP2: An Improved Method for the Identification of Ubiquitin E3-Specific Targets.
PMID:31850303
Mass Spectrometry Based Immunopeptidomics Leads to Robust Predictions of Phosphorylated HLA Class I Ligands.
PMID:31848261
The Peptide Venom Composition of the Fierce Stinging Ant Tetraponera aethiops (Formicidae: Pseudomyrmecinae).
PMID:31847368
Analysis of EYA3 Phosphorylation by Src Kinase Identifies Residues Involved in Cell Proliferation.
PMID:31847183
Polarly Localized EccE1 Is Required for ESX-1 Function and Stabilization of ESX-1 Membrane Proteins in Mycobacterium tuberculosis.
PMID:31843799
MaXLinker: Proteome-wide Cross-link Identifications with High Specificity and Sensitivity.
PMID:31839598
Multi-omic Characterization of the Mode of Action of a Potent New Antimalarial Compound, JPC-3210, Against Plasmodium falciparum.
PMID:31836637
Activation of Hypoxia-Inducible Factor Signaling Modulates the RNA Protein Interactome in Caenorhabditis elegans.
PMID:31835171
High CD206 levels in Hodgkin lymphoma-educated macrophages are linked to matrix-remodeling and lymphoma dissemination.
PMID:31825135
Proteomic Changes in Human Sperm During Sequential in vitro Capacitation and Acrosome Reaction.
PMID:31824947
Cerebrospinal Fluid-Derived Microvesicles From Sleeping Sickness Patients Alter Protein Expression in Human Astrocytes.
PMID:31824868
Metabolic rewiring of the hypertensive kidney.
PMID:31822592
The deubiquitinase USP7 stabilizes Maf proteins to promote myeloma cell survival.
PMID:31822558
Functional Translatome Proteomics Reveal Converging and Dose-Dependent Regulation by mTORC1 and eIF2α.
PMID:31812349
Identification of potential chemosignals in the European water vole Arvicola terrestris.
PMID:31804568
A Combined Mass Spectrometry and Data Integration Approach to Predict the Mitochondrial Poly(A) RNA Interacting Proteome.
PMID:31803741
An in silico-in vitro Pipeline Identifying an HLA-A*02:01+ KRAS G12V+ Spliced Epitope Candidate for a Broad Tumor-Immune Response in Cancer Patients.
PMID:31803176
A Non-interventional Clinical Trial Assessing Immune Responses After Radiofrequency Ablation of Liver Metastases From Colorectal Cancer.
PMID:31803175
Extensive protein S-nitrosylation associated with human pancreatic ductal adenocarcinoma pathogenesis.
PMID:31801946
Optimized Workflow for Multiplexed Phosphorylation Analysis of TMT-Labeled Peptides Using High-Field Asymmetric Waveform Ion Mobility Spectrometry.
PMID:31799850
Ribosomal protein gene RPL9 variants can differentially impair ribosome function and cellular metabolism.
PMID:31799629
The GID ubiquitin ligase complex is a regulator of AMPK activity and organismal lifespan.
PMID:31795790
Phenotypic proteomic profiling identifies a landscape of targets for circadian clock-modulating compounds.
PMID:31792063
Multiomic Fermentation Using Chemically Defined Synthetic Hydrolyzates Revealed Multiple Effects of Lignocellulose-Derived Inhibitors on Cell Physiology and Xylose Utilization in Zymomonas mobilis.
PMID:31787963
Glycogen branching enzyme controls cellular iron homeostasis via Iron Regulatory Protein 1 and mitoNEET.
PMID:31784520
Moonlighting matrix metalloproteinase substrates: Enhancement of proinflammatory functions of extracellular tyrosyl-tRNA synthetase upon cleavage.
PMID:31771979
DIA-NN: neural networks and interference correction enable deep proteome coverage in high throughput.
PMID:31768060
Label-Free Interactome Analysis Revealed an Essential Role of CUL3-KEAP1 Complex in Mediating the Ubiquitination and Degradation of PHD2.
PMID:31763849
Arabidopsis proteome and the mass spectral assay library.
PMID:31757973
A Subcellular Quantitative Proteomic Analysis of Herpes Simplex Virus Type 1-Infected HEK 293T Cells.
PMID:31757042
Untargeted histone profiling during naive conversion uncovers conserved modification markers between mouse and human.
PMID:31754138
Chaperone-mediated ordered assembly of the SAGA and NuA4 transcription co-activator complexes in yeast.
PMID:31748520
Contribution of proteasome-catalyzed peptide cis-splicing to viral targeting by CD8+ T cells in HIV-1 infection.
PMID:31748275
In Situ Structural Restraints from Cross-Linking Mass Spectrometry in Human Mitochondria.
PMID:31746214
The Human Immunopeptidome Project: A Roadmap to Predict and Treat Immune Diseases.
PMID:31744855
High-Throughput Quantitative Top-Down Proteomics: Histone H4.
PMID:31741267
Quorum sensing modulates the formation of virulent Legionella persisters within infected cells.
PMID:31740681
Galnt11 regulates kidney function by glycosylating the endocytosis receptor megalin to modulate ligand binding.
PMID:31740596
Regulation of macrophage activity by surface receptors contained within Borrelia burgdorferi-enriched phagosomal fractions.
PMID:31738806
Bone Marrow Mesenchymal Stem Cells' Secretome Exerts Neuroprotective Effects in a Parkinson's Disease Rat Model.
PMID:31737616
Broad Substrate-Specific Phosphorylation Events Are Associated With the Initial Stage of Plant Cell Wall Recognition in Neurospora crassa.
PMID:31736884
TMX2 Is a Crucial Regulator of Cellular Redox State, and Its Dysfunction Causes Severe Brain Developmental Abnormalities.
PMID:31735293
Immunopeptidomics of colorectal cancer organoids reveals a sparse HLA class I neoantigen landscape and no increase in neoantigens with interferon or MEK-inhibitor treatment.
PMID:31735170
Assessing Protein Sequence Database Suitability Using De Novo Sequencing.
PMID:31732549
Prolyl hydroxylase substrate adenylosuccinate lyase is an oncogenic driver in triple negative breast cancer.
PMID:31729379
Proteomic profiling of the thrombin-activated canine platelet secretome (CAPS).
PMID:31721811
The European Bioinformatics Institute in 2020: building a global infrastructure of interconnected data resources for the life sciences.
PMID:31701143
Noncompetitive binding of PpiD and YidC to the SecYEG translocon expands the global view on the SecYEG interactome in Escherichia coli.
PMID:31699901
Evidence for a role of protein phosphorylation in the maintenance of the cnidarian-algal symbiosis.
PMID:31693769
Metaproteomic data of maize rhizosphere for deciphering functional diversity.
PMID:31692741
The molecular architecture of photoreceptor phosphodiesterase 6 (PDE6) with activated G protein elucidates the mechanism of visual excitation.
PMID:31690623
Quantitative Proteome Analysis of Atg5-Deficient Mouse Embryonic Fibroblasts Reveals the Range of the Autophagy-Modulated Basal Cellular Proteome.
PMID:31690592
yRACK1/Asc1 proxiOMICs-Towards Illuminating Ships Passing in the Night.
PMID:31689955
Molecular basis of senescence transmitting in the population of human endometrial stromal cells.
PMID:31689238
Shotgun proteomics datasets acquired on Gammarus pulex animals sampled from the wild.
PMID:31687451
Proteomic dataset: Profiling of membrane fraction of Escherichia coli isolated from Crohn's disease patients after adhesion and invasion experiments.
PMID:31687427
The ProteomeXchange consortium in 2020: enabling 'big data' approaches in proteomics.
PMID:31686107
Differential scaling between G1 protein production and cell size dynamics promotes commitment to the cell division cycle in budding yeast.
PMID:31685990
Ligand-induced disorder-to-order transitions characterized by structural proteomics and molecular dynamics simulations.
PMID:31683063
Single-cell proteomics reveals changes in expression during hair-cell development.
PMID:31682227
Regulation of Pyridine Nucleotide Metabolism During Tomato Fruit Development Through Transcript and Protein Profiling.
PMID:31681351
Desumoylation of RNA polymerase III lies at the core of the Sumo stress response in yeast.
PMID:31676685
CEH-60/PBX regulates vitellogenesis and cuticle permeability through intestinal interaction with UNC-62/MEIS in Caenorhabditis elegans.
PMID:31675356
Adolescent rat social play: Amygdalar proteomic and transcriptomic data.
PMID:31673590
N-WASP Control of LPAR1 Trafficking Establishes Response to Self-Generated LPA Gradients to Promote Pancreatic Cancer Cell Metastasis.
PMID:31668663
Predominant cleavage of proteins N-terminal to serines and threonines using scandium(III) triflate.
PMID:31667593
Datasets: Sensitivity and protein digestion course of proteomic Filter Aided Sample Preparation.
PMID:31667293
Experimental data from flesh quality assessment and shelf life monitoring of high pressure processed European sea bass (Dicentrarchus labrax) fillets.
PMID:31667223
ERO1α promotes hypoxic tumor progression and is associated with poor prognosis in pancreatic cancer.
PMID:31666928
The Mitochondrial Acyl-carrier Protein Interaction Network Highlights Important Roles for LYRM Family Members in Complex I and Mitoribosome Assembly.
PMID:31666358
Expression Atlas update: from tissues to single cells.
PMID:31665515
A MYC2/MYC3/MYC4-dependent transcription factor network regulates water spray-responsive gene expression and jasmonate levels.
PMID:31662474
Expedited mapping of the ligandable proteome using fully functionalized enantiomeric probe pairs.
PMID:31659311
Proteins and microRNAs are differentially expressed in tear fluid from patients with Alzheimer's disease.
PMID:31659197
The Cytotoxic Natural Product Vioprolide A Targets Nucleolar Protein 14, Which Is Essential for Ribosome Biogenesis.
PMID:31658409
YTHDF1 links hypoxia adaptation and non-small cell lung cancer progression.
PMID:31653849
An RNA guanine quadruplex regulated pathway to TRAIL-sensitization by DDX21.
PMID:31653714
Protein tyrosine phosphatase receptor type R (PTPRR) antagonizes the Wnt signaling pathway in ovarian cancer by dephosphorylating and inactivating β-catenin.
PMID:31653698
Protein Carbonylation in Patients with Myelodysplastic Syndrome: An Opportunity for Deferasirox Therapy.
PMID:31652983
Francisella tularensis subsp. holarctica Releases Differentially Loaded Outer Membrane Vesicles Under Various Stress Conditions.
PMID:31649645
Proteomic Profiling of Extracellular Vesicles Isolated From Cerebrospinal Fluid of Former National Football League Players at Risk for Chronic Traumatic Encephalopathy.
PMID:31649498
Membrane associated proteins of two Trichomonas gallinae clones vary with the virulence.
PMID:31647841
Metabolic regulation of gene expression by histone lactylation.
PMID:31645732
A framework for TRIM21-mediated protein depletion in early mouse embryos: recapitulation of Tead4 null phenotype over three days.
PMID:31638890
Glucocorticoid Treatment Leads to Aberrant Ion and Macromolecular Transport in Regenerating Zebrafish Fins.
PMID:31636606
Invariable stoichiometry of ribosomal proteins in mouse brain tissues with aging.
PMID:31636180
A Neofunctionalized X-Linked Ampliconic Gene Family Is Essential for Male Fertility and Equal Sex Ratio in Mice.
PMID:31630956
Multiplexed proteome profiling of carbon source perturbations in two yeast species with SL-SP3-TMT.
PMID:31626996
Global Secretome Characterization of the Pathogenic Yeast Candida glabrata.
PMID:31621333
The C-Terminal Domains SnRK2 Box and ABA Box Have a Role in Sugarcane SnRK2s Auto-Activation and Activity.
PMID:31620147
Quantitative Proteome Profiling of Coxiella burnetii Reveals Major Metabolic and Stress Differences Under Axenic and Cell Culture Cultivation.
PMID:31620097
The RNA-binding protein SART3 promotes miR-34a biogenesis and G1 cell cycle arrest in lung cancer cells.
PMID:31619517
Site-specific N-glycosylation of HeLa cell glycoproteins.
PMID:31616032
Depletion of the FtsH1/3 Proteolytic Complex Suppresses the Nutrient Stress Response in the Cyanobacterium Synechocystis sp strain PCC 6803.
PMID:31615847
Human and Nonhuman Primate Lineage-Specific Footprints in the Salivary Proteome.
PMID:31614365
Arsenic Response of Three Altiplanic Exiguobacterium Strains With Different Tolerance Levels Against the Metalloid Species: A Proteomics Study.
PMID:31611848
Improved Nanoflow RPLC-CZE-MS/MS System with High Peak Capacity and Sensitivity for Nanogram Bottom-up Proteomics.
PMID:31610113
Human Proteome Project Mass Spectrometry Data Interpretation Guidelines 3.0.
PMID:31599596
A novel chlorophyll protein complex in the repair cycle of photosystem II.
PMID:31594847
A Click-Chemistry-Based Enrichable Crosslinker for Structural and Protein Interaction Analysis by Mass Spectrometry.
PMID:31593346
Evolution and regulation of nitrogen flux through compartmentalized metabolic networks in a marine diatom.
PMID:31591397
MatrisomeDB: the ECM-protein knowledge database.
PMID:31586405
Artificial fingerprints for cross-comparison of forensic DNA and protein recovery methods.
PMID:31581206
Binding to medium and long chain fatty acyls is a common property of HEAT and ARM repeat modules.
PMID:31578417
Mining for protein S-sulfenylation in Arabidopsis uncovers redox-sensitive sites.
PMID:31578252
Proteome Mapping of a Cyanobacterium Reveals Distinct Compartment Organization and Cell-Dispersed Metabolism.
PMID:31578229
NNAlign_MA; MHC Peptidome Deconvolution for Accurate MHC Binding Motif Characterization and Improved T-cell Epitope Predictions.
PMID:31578220
Functional recruitment of dynamin requires multimeric interactions for efficient endocytosis.
PMID:31575863
Mass Spectrometry-Based Plasma Proteomics: Considerations from Sample Collection to Achieving Translational Data.
PMID:31573204
Borealin-nucleosome interaction secures chromosome association of the chromosomal passenger complex.
PMID:31570499
Differential distributions of trafficking and signaling proteins of the maize ER-Golgi apparatus.
PMID:31564200
2018 YPIC Challenge: A Case Study in Characterizing an Unknown Protein Sample.
PMID:31556620
Comprehensive Landscape of Active Deubiquitinating Enzymes Profiled by Advanced Chemoproteomics.
PMID:31555637
Evaluation of Sample Preparation Methods for Fast Proteotyping of Microorganisms by Tandem Mass Spectrometry.
PMID:31555227
Purified F-ATP synthase forms a Ca2+-dependent high-conductance channel matching the mitochondrial permeability transition pore.
PMID:31554800
Evaluating False Transfer Rates from the Match-between-Runs Algorithm with a Two-Proteome Model.
PMID:31547658
Comprehensive Detection of Isopeptides between Human Tissue Transglutaminase and Gluten Peptides.
PMID:31547042
Proteomic Analysis of miR-195 and miR-497 Replacement Reveals Potential Candidates that Increase Sensitivity to Oxaliplatin in MSI/P53wt Colorectal Cancer Cells.
PMID:31546954
Refinements of LC-MS/MS Spectral Counting Statistics Improve Quantification of Low Abundance Proteins.
PMID:31541118
Endoglin Protein Interactome Profiling Identifies TRIM21 and Galectin-3 as New Binding Partners.
PMID:31540324
Recurrent GNAQ mutation encoding T96S in natural killer/T cell lymphoma.
PMID:31527657
The RNA-mediated estrogen receptor α interactome of hormone-dependent human breast cancer cell nuclei.
PMID:31527615
Identification of proteins and miRNAs that specifically bind an mRNA in vivo.
PMID:31527589
Comparative study of excretory-secretory proteins released by Schistosoma mansoni-resistant, susceptible and naïve Biomphalaria glabrata.
PMID:31521183
Ligandomes obtained from different HLA-class II-molecules are homologous for N- and C-terminal residues outside the peptide-binding cleft.
PMID:31520135
B cells sustain inflammation and predict response to immune checkpoint blockade in human melanoma.
PMID:31519915
Cannabidiol induces antioxidant pathways in keratinocytes by targeting BACH1.
PMID:31518892
Comparative compositional and functional analyses of Bothrops moojeni specimens reveal several individual variations.
PMID:31513632
Computational and experimental analysis of the glycophosphatidylinositol-anchored proteome of the human parasitic nematode Brugia malayi.
PMID:31513600
At least two molecules of the RNA helicase Has1 are simultaneously present in pre-ribosomes during ribosome biogenesis.
PMID:31511893
Proteomic Investigations of Autism Brain Identify Known and Novel Pathogenetic Processes.
PMID:31511657
Enamel peptides reveal the sex of the Late Antique 'Lovers of Modena'.
PMID:31511583
Unexpected roles for ADH1 and SORD in catalyzing the final step of erythritol biosynthesis.
PMID:31511322
An Integrated Transcriptome and Proteome Analysis Reveals New Insights into Russeting of Bagging and Non-Bagging "Golden Delicious" Apple.
PMID:31510041
A single T cell epitope drives the neutralizing anti-drug antibody response to natalizumab in multiple sclerosis patients.
PMID:31501610
Identification of proteins in the adhesive trails of the diatom Amphora coffeaeformis.
PMID:31495312
Proteomic and transcriptional profiling of rat amygdala following social play.
PMID:31493430
ALDH7A1 inhibits the intracellular transport pathways during hypoxia and starvation to promote cellular energy homeostasis.
PMID:31492851
mTMT: An Alternative, Nonisobaric, Tandem Mass Tag Allowing for Precursor-Based Quantification.
PMID:31490667
Acyldepsipeptide Probes Facilitate Specific Detection of Caseinolytic Protease P Independent of Its Oligomeric and Activity State.
PMID:31487112
Impact of poly(A)-tail G-content on Arabidopsis PAB binding and their role in enhancing translational efficiency.
PMID:31481099
The MyMOMA domain of MYO19 encodes for distinct Miro-dependent and Miro-independent mechanisms of interaction with mitochondrial membranes.
PMID:31479585
FAK activity sustains intrinsic and acquired ovarian cancer resistance to platinum chemotherapy.
PMID:31478830
Comparative proteomics of stenotopic caddisfly Crunoecia irrorata identifies acclimation strategies to warming.
PMID:31478292
HSP60-regulated Mitochondrial Proteostasis and Protein Translation Promote Tumor Growth of Ovarian Cancer.
PMID:31477750
CryoEM structures of Arabidopsis DDR complexes involved in RNA-directed DNA methylation.
PMID:31477705
RST1 and RIPR connect the cytosolic RNA exosome to the Ski complex in Arabidopsis.
PMID:31455787
Insights into Early Recovery from Influenza Pneumonia by Spatial and Temporal Quantification of Putative Lung Regenerating Cells and by Lung Proteomics.
PMID:31455003
SILAC-Based Quantification of TGFBR2-Regulated Protein Expression in Extracellular Vesicles of Microsatellite Unstable Colorectal Cancers.
PMID:31454892
Cell-derived extracellular vesicles can be used as a biomarker reservoir for glioblastoma tumor subtyping.
PMID:31453379
Bolt: a New Age Peptide Search Engine for Comprehensive MS/MS Sequencing Through Vast Protein Databases in Minutes.
PMID:31452088
ComplexBrowser: A Tool for Identification and Quantification of Protein Complexes in Large-scale Proteomics Datasets.
PMID:31447428
Prognostic value of biomarkers EpCAM and αB-crystallin associated with lymphatic metastasis in breast cancer by iTRAQ analysis.
PMID:31443698
Synthetic Polyclonal-Derived CDR Peptides as an Innovative Strategy in Glaucoma Therapy.
PMID:31443184
NifA is the master regulator of both nitrogenase systems in Rhodobacter capsulatus.
PMID:31441241
The Effects of Sindbis Viral Vectors on Neuronal Function.
PMID:31440143
Structural basis for lamin assembly at the molecular level.
PMID:31434876
The ubiquitin-conjugating enzyme UBE2QL1 coordinates lysophagy in response to endolysosomal damage.
PMID:31432621
PPM1G forms a PPP-type phosphatase holoenzyme with B56δ that maintains adherens junction integrity.
PMID:31432583
Progress on Identifying and Characterizing the Human Proteome: 2019 Metrics from the HUPO Human Proteome Project.
PMID:31430157
PPARβ/δ recruits NCOR and regulates transcription reinitiation of ANGPTL4.
PMID:31428774
Proteomic Insights into Phycobilisome Degradation, A Selective and Tightly Controlled Process in The Fast-Growing Cyanobacterium Synechococcus elongatus UTEX 2973.
PMID:31426316
Dentate Gyrus Peroxiredoxin 6 Levels Discriminate Aged Unimpaired From Impaired Rats in a Spatial Memory Task.
PMID:31417400
Evaluation of sodium deoxycholate as solubilization buffer for oil palm proteomics analysis.
PMID:31415606
Redox modifications of cysteine-containing proteins, cell cycle arrest and translation inhibition: Involvement in vitamin C-induced breast cancer cell death.
PMID:31412312
A closer look at Aspergillus: online monitoring via scattered light enables reproducible phenotyping.
PMID:31396392
Toll-Like Receptor 2 Release by Macrophages: An Anti-inflammatory Program Induced by Glucocorticoids and Lipopolysaccharide.
PMID:31396208
S100A9 extends lifespan in insulin deficiency.
PMID:31391467
An influenza virus-triggered SUMO switch orchestrates co-opted endogenous retroviruses to stimulate host antiviral immunity.
PMID:31391303
Quantifying the impact of public omics data.
PMID:31383865
Resistance in marine cyanobacteria differs against specialist and generalist cyanophages.
PMID:31383764
Aspartate Residues Far from the Active Site Drive O-GlcNAc Transferase Substrate Selection.
PMID:31373491
Resolving subcellular plant metabolism.
PMID:31361942
Structure of the Human Core Centromeric Nucleosome Complex.
PMID:31353180
Network Rewiring of Homologous Recombination Enzymes during Mitotic Proliferation and Meiosis.
PMID:31351878
Mechanism of pharmacochaperoning in a mammalian KATP channel revealed by cryo-EM.
PMID:31343405
EOMES interacts with RUNX3 and BRG1 to promote innate memory cell formation through epigenetic reprogramming.
PMID:31341159
In-Depth, Proteomic Analysis of Nasal Secretions from Patients With Chronic Rhinosinusitis and Nasal Polyps.
PMID:31332980
Peptidyl-Prolyl Isomerase ppiB Is Essential for Proteome Homeostasis and Virulence in Burkholderia pseudomallei.
PMID:31331957
Inhibition of bacterial ubiquitin ligases by SidJ-calmodulin catalysed glutamylation.
PMID:31330532
Nitric oxide maintains endothelial redox homeostasis through PKM2 inhibition.
PMID:31328803
Matrix metalloproteinases inactivate the proinflammatory functions of secreted moonlighting tryptophanyl-tRNA synthetase.
PMID:31324718
Biopearling of Interconnected Outer Membrane Vesicle Chains by a Marine Flavobacterium.
PMID:31324630
Proteogenomic Analysis of Protein Sequence Alterations in Breast Cancer Cells.
PMID:31316139
Anti-tumor effects of PIM/PI3K/mTOR triple kinase inhibitor IBL-302 in neuroblastoma.
PMID:31310053
In vivo identification of GTPase interactors by mitochondrial relocalization and proximity biotinylation.
PMID:31294692
Serial Systemic Candida albicans Infection Highlighted by Proteomics.
PMID:31293987
Protein synthesis rates and ribosome occupancies reveal determinants of translation elongation rates.
PMID:31292258
PTMProphet: Fast and Accurate Mass Modification Localization for the Trans-Proteomic Pipeline.
PMID:31290668
Antagonistic Interactions between Benzo[a]pyrene and Fullerene (C60) in Toxicological Response of Marine Mussels.
PMID:31288459
Reconstitution of Microtubule Nucleation In Vitro Reveals Novel Roles for Mzt1.
PMID:31287970
Efficient T cell-B cell collaboration guides autoantibody epitope bias and onset of celiac disease.
PMID:31285344
Selective Proteolysis of α-Lactalbumin by Endogenous Enzymes of Human Milk at Acidic pH.
PMID:31271254
Decreased synthesis of ribosomal proteins in tauopathy revealed by non-canonical amino acid labelling.
PMID:31268600
Prediction of an Upper Limit for the Fraction of Interprotein Cross-Links in Large-Scale In Vivo Cross-Linking Studies.
PMID:31267744
CDK1 and CDK2 regulate NICD1 turnover and the periodicity of the segmentation clock.
PMID:31267714
Extracellular vesicles impose quiescence on residual hematopoietic stem cells in the leukemic niche.
PMID:31267709
Identification of PKCα-dependent phosphoproteins in mouse retina.
PMID:31255707
WDFY2 restrains matrix metalloproteinase secretion and cell invasion by controlling VAMP3-dependent recycling.
PMID:31253801
Quantification of epitope abundance reveals the effect of direct and cross-presentation on influenza CTL responses.
PMID:31253788
Structural basis of TFIIH activation for nucleotide excision repair.
PMID:31253769
A proteomic analysis of the statocyst endolymph in common cuttlefish (Sepia officinalis): an assessment of acoustic trauma after exposure to sound.
PMID:31249355
Defining the NSD2 interactome: PARP1 PARylation reduces NSD2 histone methyltransferase activity and impedes chromatin binding.
PMID:31248990
Targeted and Interactome Proteomics Revealed the Role of PHD2 in Regulating BRD4 Proline Hydroxylation.
PMID:31239290
Comparative Integrated Omics Analysis of the Hfq Regulon in Bordetella pertussis.
PMID:31238496
Comparative proteomic study of liver lipid droplets and mitochondria in mice housed at different temperatures.
PMID:31234227
Symplasmic phloem unloading and radial post-phloem transport via vascular rays in tuberous roots of Manihot esculenta.
PMID:31232453
Cytosine N4-Methylation via M.Ssp6803II Is Involved in the Regulation of Transcription, Fine- Tuning of DNA Replication and DNA Repair in the Cyanobacterium Synechocystis sp. PCC 6803.
PMID:31231331
Inhibition of mPGES-1 or COX-2 Results in Different Proteomic and Lipidomic Profiles in A549 Lung Cancer Cells.
PMID:31231223
Proteomic analysis of urinary extracellular vesicles reveal biomarkers for neurologic disease.
PMID:31229437
Quantitative proteomics revealed C6orf203/MTRES1 as a factor preventing stress-induced transcription deficiency in human mitochondria.
PMID:31226201
Cross-linking Proteomics Indicates Effects of Simvastatin on the TLR2 Interactome and Reveals ACTR1A as a Novel Regulator of the TLR2 Signal Cascade.
PMID:31221720
PTPN21 and Hook3 relieve KIF1C autoinhibition and activate intracellular transport.
PMID:31217419
XAB2 depletion induces intron retention in POLR2A to impair global transcription and promote cellular senescence.
PMID:31216022
Degradome of soluble ADAM10 and ADAM17 metalloproteases.
PMID:31209506
Mediator complex interaction partners organize the transcriptional network that defines neural stem cells.
PMID:31209209
Absolute quantification of cohesin, CTCF and their regulators in human cells.
PMID:31204999
Abundance of bacterial Type VI secretion system components measured by targeted proteomics.
PMID:31197144
Phosphoproteome Analysis Reveals Estrogen-ER Pathway as a Modulator of mTOR Activity Via DEPTOR.
PMID:31189691
miR-17-92 and miR-106b-25 clusters regulate beta cell mitotic checkpoint and insulin secretion in mice.
PMID:31187215
Systems Analyses Reveal the Resilience of Escherichia coli Physiology during Accumulation and Export of the Nonnative Organic Acid Citramalate.
PMID:31186337
Single-Shot Capillary Zone Electrophoresis-Tandem Mass Spectrometry Produces over 4400 Phosphopeptide Identifications from a 220 ng Sample.
PMID:31180221
The TOR Pathway Plays Pleiotropic Roles in Growth and Stress Responses of the Fungal Pathogen Cryptococcus neoformans.
PMID:31175227
Quantification of cellular protein and redox imbalance using SILAC-iodoTMT methodology.
PMID:31154163
Musashi interaction with poly(A)-binding protein is required for activation of target mRNA translation.
PMID:31152063
One-Pot Quantitative Top- and Middle-Down Analysis of GluC-Digested Histone H4.
PMID:31147891
Assessing the Relationship Between Mass Window Width and Retention Time Scheduling on Protein Coverage for Data-Independent Acquisition.
PMID:31147889
Intact Transition Epitope Mapping - Targeted High-Energy Rupture of Extracted Epitopes (ITEM-THREE).
PMID:31147491
Novel Prognostic Markers in Triple-Negative Breast Cancer Discovered by MALDI-Mass Spectrometry Imaging.
PMID:31139569
Global Proteome and Ubiquitinome Changes in the Soluble and Insoluble Fractions of Q175 Huntington Mice Brains.
PMID:31138642
An Integrated Systems Approach Unveils New Aspects of Microoxia-Mediated Regulation in Bradyrhizobium diazoefficiens.
PMID:31134003
DamC reveals principles of chromatin folding in vivo without crosslinking and ligation.
PMID:31133702
Multifaceted Mass Spectrometric Investigation of Neuropeptide Changes in Atlantic Blue Crab, Callinectes sapidus, in Response to Low pH Stress.
PMID:31132273
Pax3 cooperates with Ldb1 to direct local chromosome architecture during myogenic lineage specification.
PMID:31127120
Electron Transfer/Higher Energy Collisional Dissociation of Doubly Charged Peptide Ions: Identification of Labile Protein Phosphorylations.
PMID:31111417
Murine obscurin and Obsl1 have functionally redundant roles in sarcolemmal integrity, sarcoplasmic reticulum organization, and muscle metabolism.
PMID:31098411
Simultaneous Improvement in the Precision, Accuracy, and Robustness of Label-free Proteome Quantification by Optimizing Data Manipulation Chains.
PMID:31097671
PFA ependymoma-associated protein EZHIP inhibits PRC2 activity through a H3 K27M-like mechanism.
PMID:31086175
Comparison of Proteome Composition of Serum Enriched in Extracellular Vesicles Isolated from Polycythemia Vera Patients and Healthy Controls.
PMID:31064135
Integrative proteomics reveals an increase in non-degradative ubiquitylation in activated CD4+ T cells.
PMID:31061531
Thylakoid Protein Phosphorylation Dynamics in a Moss Mutant Lacking SERINE/THREONINE PROTEIN KINASE STN8.
PMID:31061101
SIRT3 controls brown fat thermogenesis by deacetylation regulation of pathways upstream of UCP1.
PMID:31060926
Isolation and mass spectrometry based hydroxyproline mapping of type II collagen derived from Capra hircus ear cartilage.
PMID:31044171
A combined FSTRA-shotgun proteomics approach to identify molecular changes in zebrafish upon chemical exposure.
PMID:31036921
TEFM regulates both transcription elongation and RNA processing in mitochondria.
PMID:31036713
Updated MS²PIP web server delivers fast and accurate MS² peak intensity prediction for multiple fragmentation methods, instruments and labeling techniques.
PMID:31028400
Comprehensive Study of the Proteome and Transcriptome of the Venom of the Most Venomous European Viper: Discovery of a New Subclass of Ancestral Snake Venom Metalloproteinase Precursor-Derived Proteins.
PMID:31017792
Modeling Protein Destiny in Developing Fruit.
PMID:31015299
A Chemical Strategy for Protease Substrate Profiling.
PMID:31006619
Dishevelled-3 conformation dynamics analyzed by FRET-based biosensors reveals a key role of casein kinase 1.
PMID:31000703
TNRC6 proteins modulate hepatitis C virus replication by spatially regulating the binding of miR-122/Ago2 complexes to viral RNA.
PMID:30997501
High-throughput Exploration of the Network Dependent on AKT1 in Mouse Ovarian Granulosa Cells.
PMID:30992313
Synthetic Lethality of Wnt Pathway Activation and Asparaginase in Drug-Resistant Acute Leukemias.
PMID:30991026
Rapid and Reversible Knockdown of Endogenously Tagged Endosomal Proteins via an Optimized HaloPROTAC Degrader.
PMID:30978004
The histone chaperone CAF-1 cooperates with the DNA methyltransferases to maintain Cd4 silencing in cytotoxic T cells.
PMID:30975723
Identification of ChIP-seq and RIME grade antibodies for Estrogen Receptor alpha.
PMID:30970003
An RNA Chaperone-Like Protein Plays Critical Roles in Chloroplast mRNA Stability and Translation in Arabidopsis and Maize.
PMID:30962391
FET family fusion oncoproteins target the SWI/SNF chromatin remodeling complex.
PMID:30962207
Proteomic and transcriptomic experiments reveal an essential role of RNA degradosome complexes in shaping the transcriptome of Mycobacterium tuberculosis.
PMID:30957850
Quantitative mass spectrometric analysis to unravel glycoproteomic signature of follicular fluid in women with polycystic ovary syndrome.
PMID:30946770
Proximity-dependent proteomics of the Chlamydia trachomatis inclusion membrane reveals functional interactions with endoplasmic reticulum exit sites.
PMID:30943267
Indoxyl Sulfate and p-Cresyl Sulfate Promote Vascular Calcification and Associate with Glucose Intolerance.
PMID:30940651
Cytological and Proteomic Analysis of Wheat Pollen Abortion Induced by Chemical Hybridization Agent.
PMID:30939734
Dual chemical probes enable quantitative system-wide analysis of protein prenylation and prenylation dynamics.
PMID:30936521
Discovery of Covalent CDK14 Inhibitors with Pan-TAIRE Family Specificity.
PMID:30930164
Differential role for phosphorylation in alternative polyadenylation function versus nuclear import of SR-like protein CPSF6.
PMID:30916345
Glycome and Proteome Components of Golgi Membranes Are Common between Two Angiosperms with Distinct Cell-Wall Structures.
PMID:30914498
Cellular senescence in progenitor cells contributes to diminished remyelination potential in progressive multiple sclerosis.
PMID:30910981
Targeted Mass Spectrometry Analysis of Clostridium perfringens Toxins.
PMID:30909561
Effect of MSCs and MSC-Derived Extracellular Vesicles on Human Blood Coagulation.
PMID:30893822
The Dual Prey-Inactivation Strategy of Spiders-In-Depth Venomic Analysis of Cupiennius salei.
PMID:30893800
A genome-wide algal mutant library and functional screen identifies genes required for eukaryotic photosynthesis.
PMID:30886426
Spectral Clustering Improves Label-Free Quantification of Low-Abundant Proteins.
PMID:30859831
Signs of biological activities of 28,000-year-old mammoth nuclei in mouse oocytes visualized by live-cell imaging.
PMID:30858410
Proteome-wide solubility and thermal stability profiling reveals distinct regulatory roles for ATP.
PMID:30858367
Synovial fluid proteome changes in ACL injury-induced posttraumatic osteoarthritis: Proteomics analysis of porcine knee synovial fluid.
PMID:30822327
Dynamic BAF chromatin remodeling complex subunit inclusion promotes temporally distinct gene expression programs in cardiogenesis.
PMID:30814119
A synthetic non-histone substrate to study substrate targeting by the Gcn5 HAT and sirtuin HDACs.
PMID:30804216
Human colon organoids reveal distinct physiologic and oncogenic Wnt responses.
PMID:30792186
A mechanism for temporary bioadhesion.
PMID:30782790
TKO6: A Peptide Standard To Assess Interference for Unit-Resolved Isobaric Labeling Platforms.
PMID:30481031
Web-Based Search Tool for Visualizing Instrument Performance Using the Triple Knockout (TKO) Proteome Standard.
PMID:30451507
The European Bioinformatics Institute in 2018: tools, infrastructure and training.
PMID:30445657