PGG Han

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PGG Han

metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:12.310942

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PGG_Han

metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:12.310942

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Other names: PGG_Han

The Han Chinese Genomes Database (PGG.Han) serves as the central repository of the genomic data of the Han Chinese Genomes Project (Phase I). As is its current version, PGG.Han archives genomic data of 114,783 Han Chinese individuals (a.k.a. Han100K), including high coverage WGS data (n = 319), low coverage WGS data (n = 11878), and high-density SNV data with 8,056,973 variants genotyped or partially imputed (n = 102,586. PGG.Han aims to facilitate: 1) population structure analysis; 2) ancestry inference; 3) imputation; 4) GWAS. Computational tools are implemented into the PGG.Han, and an online user interface is provided for data analysis and results visualization.

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PGG.Han: the Han Chinese genome database and analysis platform
PMID: 31584086

metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:12.310942

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• PGG.Han: the Han Chinese genome database and analysis platform PubMed citations: 16.

  16 articles citing: PGG.Han: the Han Chinese genome database and analysis platform

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  A rare genetic variant in the cleavage site of prepro-orexin is associated with idiopathic hypersomnia. PMID:35414074

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  PDE4B Proposed as a High Myopia Susceptibility Gene in Chinese Population. PMID:35116054

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  Genetic Polymorphism of Drug Metabolic Gene CYPs, VKORC1, NAT2, DPYD and CHST3 of Five Ethnic Minorities in Heilongjiang Province, Northeast China. PMID:34876832

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  DEL in China: the D antigen among serologic RhD-negative individuals. PMID:34670559

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  How understudied populations have contributed to our understanding of Alzheimer's disease genetics. PMID:33889936

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  Association of Interleukin-1α Functional Polymorphism with Risk of Chronic Periodontitis in Han Chinese Population. PMID:33854406

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  Combined Low-/High-Density Modern and Ancient Genome-Wide Data Document Genomic Admixture History of High-Altitude East Asians. PMID:33643377

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  RET compound inheritance in Chinese patients with Hirschsprung disease: lack of penetrance from insufficient gene dysfunction. PMID:33433679

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  Population genomics of East Asian ethnic groups. PMID:33292737

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  Migraine as a Risk Factor for Peripheral Artery Occlusive Disease: A Population-Based Cohort Study. PMID:33218041

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  Whole genome sequencing data of multiple individuals of Pakistani descent. PMID:33051442

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  High Levels of Genetic Diversity within Nilo-Saharan Populations: Implications for Human Adaptation. PMID:32781046

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  Genetic Reconstruction and Forensic Analysis of Chinese Shandong and Yunnan Han Populations by Co-Analyzing Y Chromosomal STRs and SNPs. PMID:32635262

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  Population genetic analysis of Shaanxi male Han Chinese population reveals genetic differentiation and homogenization of East Asians. PMID:32163678

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  The 27th annual Nucleic Acids Research database issue and molecular biology database collection. PMID:31906604

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  Database Resources of the National Genomics Data Center in 2020. PMID:31702008

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genotype and phenotype

metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:12.310942

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gwas study

metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:12.310942

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whole genome sequencing

metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:12.310942

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population genetics

metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:12.310942

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dna polymorphism

metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:12.310942

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genotype and phenotype gwas study whole genome sequencing population genetics dna polymorphism