YanHuang - YH1 Genome Database
Names
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YanHuang - YH1 Genome Database
metasource: Fairsharing.org
version: FAIRsharing.org: YH1; YanHuang - YH1 Genome Database; DOI: https://doi.org/10.25504/FAIRsharing.6cnw23; Last edited: April 26, 2021, 8:25 a.m.; Last accessed: Jan 03 2022 7:06 p.m.
YH1
metasource: Fairsharing.org
version: FAIRsharing.org: YH1; YanHuang - YH1 Genome Database; DOI: https://doi.org/10.25504/FAIRsharing.6cnw23; Last edited: April 26, 2021, 8:25 a.m.; Last accessed: Jan 03 2022 7:06 p.m.
YH database
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Names
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YanHuang - YH1 Genome Database
metasource: Fairsharing.orgversion: FAIRsharing.org: YH1; YanHuang - YH1 Genome Database; DOI: https://doi.org/10.25504/FAIRsharing.6cnw23; Last edited: April 26, 2021, 8:25 a.m.; Last accessed: Jan 03 2022 7:06 p.m.
YH1
metasource: Fairsharing.orgversion: FAIRsharing.org: YH1; YanHuang - YH1 Genome Database; DOI: https://doi.org/10.25504/FAIRsharing.6cnw23; Last edited: April 26, 2021, 8:25 a.m.; Last accessed: Jan 03 2022 7:06 p.m.
YH database
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
Names
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YanHuang - YH1 Genome Database
metasource: Fairsharing.orgversion: FAIRsharing.org: YH1; YanHuang - YH1 Genome Database; DOI: https://doi.org/10.25504/FAIRsharing.6cnw23; Last edited: April 26, 2021, 8:25 a.m.; Last accessed: Jan 03 2022 7:06 p.m.
YH1
metasource: Fairsharing.orgversion: FAIRsharing.org: YH1; YanHuang - YH1 Genome Database; DOI: https://doi.org/10.25504/FAIRsharing.6cnw23; Last edited: April 26, 2021, 8:25 a.m.; Last accessed: Jan 03 2022 7:06 p.m.
YH database
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
This source may no longer be available. No known URL could be resolved successfully.
The YH database presents the entire DNA sequence of a Han Chinese individual, as a representative of Asian population. This genome, named as YH, is the start of YanHuang Project, which aims to sequence 100 Chinese individuals in 3 years.assembled based on 3.3 billion reads (117.7Gbp raw data) generated by Illumina Genome Analyzer. In total of 102.9Gbp nucleotides were mapped onto the NCBI human reference genome (Build 36) by self-developed software SOAP (Short Oligonucleotide Alignment Program), and 3.07 million SNPs were identified.
Description
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The YH database presents the entire DNA sequence of a Han Chinese individual, as a representative of Asian population. This genome, named as YH, is the start of YanHuang Project, which aims to sequence 100 Chinese individuals in 3 years.assembled based on 3.3 billion reads (117.7Gbp raw data) generated by Illumina Genome Analyzer. In total of 102.9Gbp nucleotides were mapped onto the NCBI human reference genome (Build 36) by self-developed software SOAP (Short Oligonucleotide Alignment Program), and 3.07 million SNPs were identified.
metasource: Fairsharing.orgversion: FAIRsharing.org: YH1; YanHuang - YH1 Genome Database; DOI: https://doi.org/10.25504/FAIRsharing.6cnw23; Last edited: April 26, 2021, 8:25 a.m.; Last accessed: Jan 03 2022 7:06 p.m.
A database for the first Asian diploid genome
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
Webpage:
http://yh.genomics.org.cnWebpage
More detailed information about this field from each metasource.
http://yh.genomics.org.cn
metasource: Fairsharing.orgversion: FAIRsharing.org: YH1; YanHuang - YH1 Genome Database; DOI: https://doi.org/10.25504/FAIRsharing.6cnw23; Last edited: April 26, 2021, 8:25 a.m.; Last accessed: Jan 03 2022 7:06 p.m.
http://yh.genomics.org.cn/
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
Publications:
Publications
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The YH database: the first Asian diploid genome database
PMID: 19073702
metasource: Fairsharing.org
version: FAIRsharing.org: YH1; YanHuang - YH1 Genome Database; DOI: https://doi.org/10.25504/FAIRsharing.6cnw23; Last edited: April 26, 2021, 8:25 a.m.; Last accessed: Jan 03 2022 7:06 p.m.
Publications
More detailed information about this field from each metasource.
The YH database: the first Asian diploid genome database
PMID: 19073702
metasource: Fairsharing.org
version: FAIRsharing.org: YH1; YanHuang - YH1 Genome Database; DOI: https://doi.org/10.25504/FAIRsharing.6cnw23; Last edited: April 26, 2021, 8:25 a.m.; Last accessed: Jan 03 2022 7:06 p.m.
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The YH database: the first Asian diploid genome database
PubMed citations: 24.
24 articles citing: The YH database: the first Asian diploid genome database
Novel p.G1344E mutation in FBN1 is associated with ectopia lentis. PMID:32404357
Novel mutations in CRYBB1/CRYBB2 identified by targeted exome sequencing in Chinese families with congenital cataract. PMID:30364188
Prioritization and functional assessment of noncoding variants associated with complex diseases. PMID:29996888
GJB3/GJB6 screening in GJB2 carriers with idiopathic hearing loss: Is it necessary? PMID:29926981
A Chinese family with Axenfeld-Rieger syndrome: report of the clinical and genetic findings. PMID:28730073
Mutations in the TMCO3 Gene are Associated with Cornea Guttata and Anterior Polar Cataract. PMID:27484837
Exome sequencing identifies novel compound heterozygous IFNA4 and IFNA10 mutations as a cause of impaired function in Crohn's disease patients. PMID:26000985
Whole-exome sequencing identifies OR2W3 mutation as a cause of autosomal dominant retinitis pigmentosa. PMID:25783483
Arioc: high-throughput read alignment with GPU-accelerated exploration of the seed-and-extend search space. PMID:25780763
The distribution and mutagenesis of short coding INDELs from 1,128 whole exomes. PMID:25765891
Genome-wide candidate regions for selective sweeps revealed through massive parallel sequencing of DNA across ten turkey populations. PMID:25421611
Genetic landscape of esophageal squamous cell carcinoma. PMID:25151357
The personal genome browser: visualizing functions of genetic variants. PMID:24799434
Identification of functional cooperative mutations of SETD2 in human acute leukemia. PMID:24509477
Ataxia and hypogonadism caused by the loss of ubiquitin ligase activity of the U box protein CHIP. PMID:24113144
Whole-genome sequences of DA and F344 rats with different susceptibilities to arthritis, autoimmunity, inflammation and cancer. PMID:23695301
Double restriction-enzyme digestion improves the coverage and accuracy of genome-wide CpG methylation profiling by reduced representation bisulfite sequencing. PMID:23324053
Whole genome SNP discovery and analysis of genetic diversity in Turkey (Meleagris gallopavo). PMID:22891612
Exome sequencing identifies compound heterozygous mutations in CYP4V2 in a pedigree with retinitis pigmentosa. PMID:22693542
High resolution profiling of human exon methylation by liquid hybridization capture-based bisulfite sequencing. PMID:22151801
TIARA: a database for accurate analysis of multiple personal genomes based on cross-technology. PMID:21051338
Data structures and compression algorithms for high-throughput sequencing technologies. PMID:20946637
Large scale single nucleotide polymorphism discovery in unsequenced genomes using second generation high throughput sequencing technology: applied to turkey. PMID:19835600
Data structures and compression algorithms for genomic sequence data. PMID:19447783
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deoxyribonucleic acid
metasource: Fairsharing.org
version: FAIRsharing.org: YH1; YanHuang - YH1 Genome Database; DOI: https://doi.org/10.25504/FAIRsharing.6cnw23; Last edited: April 26, 2021, 8:25 a.m.; Last accessed: Jan 03 2022 7:06 p.m.
genome
metasource: Fairsharing.org
version: FAIRsharing.org: YH1; YanHuang - YH1 Genome Database; DOI: https://doi.org/10.25504/FAIRsharing.6cnw23; Last edited: April 26, 2021, 8:25 a.m.; Last accessed: Jan 03 2022 7:06 p.m.
human genes and diseases
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
general polymorphism databases
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Tags
More detailed information about this field from each metasource.
deoxyribonucleic acid
metasource: Fairsharing.orgversion: FAIRsharing.org: YH1; YanHuang - YH1 Genome Database; DOI: https://doi.org/10.25504/FAIRsharing.6cnw23; Last edited: April 26, 2021, 8:25 a.m.; Last accessed: Jan 03 2022 7:06 p.m.
genome
metasource: Fairsharing.orgversion: FAIRsharing.org: YH1; YanHuang - YH1 Genome Database; DOI: https://doi.org/10.25504/FAIRsharing.6cnw23; Last edited: April 26, 2021, 8:25 a.m.; Last accessed: Jan 03 2022 7:06 p.m.
human genes and diseases
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
general polymorphism databases
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
dna genome human genes and diseases polymorphism
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