Mammalian Gene Collection

Names
More detailed information about this field from each metasource.

Mammalian Gene Collection
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:03.248757

mammalian_gene_collection
metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:03.248757

Other names: mammalian_gene_collection

Overview The NIH Mammalian Gene Collection (MGC) program is a multi-institutional effort to identify and sequence cDNA clones containing a full-length open reading frame (FL-ORF) for human, mouse, and rat genes. To date, the MGC has produced over 324 cDNA libraries derived from human tissue and cell lines, as well as mouse and rat tissues. The MGC has sequenced and verified the complete FL-ORFs for a non-redundant set of 11,666 human, 10,602 mouse, and 854 rat genes. Strategy 5' expressed-sequence tags (ESTs) are generated from libraries and analyzed to identify candidate complete ORF clones. These clones are subjected to high accuracy full-insert sequencing and assessed for complete ORFs. Candidate clones for genes are clones that have been identified as potential complete ORFs and are waiting full-insert sequencing. All MGC sequences are deposited in GenBank and available without restriction. The cDNA clones generated by the MGC are available through the IMAGE clone distribution network and are fully accessible to the community.

Webpage:

http://mgc.nci.nih.gov/

Licence:

Name: Unlicense

Publications:

Publications
More detailed information about this field from each metasource.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences
PMID: 12477932
metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:03.248757

The mammalian gene collection
PMID: 10521335
metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:03.248757

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences PubMed citations: 588.

588 articles citing: Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Epitranscriptomic Reprogramming Is Required to Prevent Stress and Damage from Acetaminophen. PMID:35327975
FAM117A Is a New Prognostic Marker of Lung Adenocarcinoma and Predicts Sensitivity to PD0332991. PMID:35280504
CRACking the Molecular Regulatory Mechanism of SOCE during Platelet Activation in Thrombo-Occlusive Diseases. PMID:35203269
Knockdown of lncRNA LINC00662 suppresses malignant behaviour of osteosarcoma cells via competition with miR-30b-3p to regulate ELK1 expression. PMID:35123530
MIER3 suppresses the progression of non-small cell lung cancer by inhibiting Wnt/β-Catenin pathway and histone acetyltransferase activity. PMID:35117188
Long Non-coding RNA: Insight Into Mechanisms of Alzheimer's Disease. PMID:35095418
ZC3H15 promotes gastric cancer progression by targeting the FBXW7/c-Myc pathway. PMID:35064102
Plasmolipin and Its Role in Cell Processes. PMID:34955555
Distinct roles of nuclear basket proteins in directing the passage of mRNA through the nuclear pore. PMID:34504007
Isoform Age - Splice Isoform Profiling Using Long-Read Technologies. PMID:34409069
A ubiquitin-like protein encoded by the "noncoding" RNA TINCR promotes keratinocyte proliferation and wound healing. PMID:34351912
Therapeutic Cancer Vaccination with Immunopeptidomics-Discovered Antigens Confers Protective Antitumor Efficacy. PMID:34298622
Predictive value of lncRNA LOC100505851 in breast cancer in the neoadjuvant setting. PMID:34268074
Resistin, a Novel Host Defense Peptide of Innate Immunity. PMID:34220862
CNKSR1 serves as a scaffold to activate an EGFR phosphatase via exclusive interaction with RhoB-GTP. PMID:34187934
LncRNA MYLK-AS1 acts as an oncogene by epigenetically silencing large tumor suppressor 2 (LATS2) in gastric cancer. PMID:34181498
Multi-Omic Meta-Analysis of Transcriptomes and the Bibliome Uncovers Novel Hypoxia-Inducible Genes. PMID:34065451
A comprehensive interaction study provides a potential domain interaction network of human death domain superfamily proteins. PMID:33993194
DSIP-Like KND Peptide Reduces Brain Infarction in C57Bl/6 and Reduces Myocardial Infarction in SD Rats When Administered during Reperfusion. PMID:33918965
NRBP2 Functions as a Tumor Suppressor and Inhibits Epithelial-to-Mesenchymal Transition in Breast Cancer. PMID:33816275
ARRDC3 as a Diagnostic and Prognostic Biomarker for Epithelial Ovarian Cancer Based on Data Mining. PMID:33790626
TMEM52B suppression promotes cancer cell survival and invasion through modulating E-cadherin stability and EGFR activity. PMID:33641663
Positive feedback of SuFu negating protein 1 on Hedgehog signaling promotes colorectal tumor growth. PMID:33608498
De novo filament formation by human hair keratins K85 and K35 follows a filament development pattern distinct from cytokeratin filament networks. PMID:33605551
An atlas of neural crest lineages along the posterior developing zebrafish at single-cell resolution. PMID:33591267
Endothelial Nitric Oxide Synthase Knockdown in Human Stem Cells Impacts Mitochondrial Biogenesis and Adipogenesis: Live-Cell Real-Time Fluorescence Imaging. PMID:33562279
Reduced expression of annexin A2 is associated with impaired cell surface fibrinolysis and venous thromboembolism. PMID:33512476
Sporadic Parkinson's Disease Potential Risk Loci Identified in Han Ancestry of Chinese Mainland. PMID:33510632
The resting membrane potential of hSC-CM in a syncytium is more hyperpolarised than that of isolated cells. PMID:33465001
Identification of DNA Methyltransferase-1 Inhibitor for Breast Cancer Therapy through Computational Fragment-Based Drug Design. PMID:33450856
Overexpression of a Long Non-Coding RNA BC037916 is Associated with Pancreatic Tumorigenesis and Poor Prognosis. PMID:33447050
Current understanding of CREPT and p15RS, carboxy-terminal domain (CTD)-interacting proteins, in human cancers. PMID:33239754
Long non-coding RNA 01126 promotes periodontitis pathogenesis of human periodontal ligament cells via miR-518a-5p/HIF-1α/MAPK pathway. PMID:33231338
Sarcolipin Exhibits Abundant RNA Transcription and Minimal Protein Expression in Horse Gluteal Muscle. PMID:33202832
LncRNA MYLK-AS1 facilitates tumor progression and angiogenesis by targeting miR-424-5p/E2F7 axis and activating VEGFR-2 signaling pathway in hepatocellular carcinoma. PMID:33168027
Overexpression of EPDR1 has an antitumorigenic effect on breast cancer in vitro. PMID:33165408
Long Non-Coding RNA LINC00662 Regulated Proliferation and Migration by Targeting miR-34a-5p/LMAN2L Axis in Glioma. PMID:33116598
PTPLAD2 and USP49 Involved in the Pathogenesis of Smoke-Induced COPD by Integrative Bioinformatics Analysis. PMID:33116468
CUEDC1 inhibits epithelial-mesenchymal transition via the TβRI/Smad signaling pathway and suppresses tumor progression in non-small cell lung cancer. PMID:33099540
Purification of sarcoplasmic reticulum vesicles from horse gluteal muscle. PMID:32956693
Long non-coding RNA MIR4300HG polymorphisms are associated with postoperative nausea and vomiting: a genome-wide association study. PMID:32928300
LINC00662 Long Non-Coding RNA Knockdown Attenuates the Proliferation, Migration, and Invasion of Osteosarcoma Cells by Regulating the microRNA-15a-5p/Notch2 Axis. PMID:32848412
Improved lactate control with dichloroacetate in a case with severe neonatal lactic acidosis due to MTFMT mitochondrial translation disorder. PMID:32577402
BARMR1-mediated sorafenib resistance is derived through stem-like property acquisition by activating integrin-FAK signaling pathways. PMID:32532973
Free Fatty Acid Receptors 2 and 3 as Microbial Metabolite Sensors to Shape Host Health: Pharmacophysiological View. PMID:32521775
Comparative Transcriptome Profiling Analysis Uncovers Novel Heterosis-Related Candidate Genes Associated with Muscular Endurance in Mules. PMID:32512843
Molecular characterization of a 1p36 chromosomal duplication and in utero interference define ENO1 as a candidate gene for polymicrogyria. PMID:32488097
Long noncoding RNA MYLK-AS1 promotes growth and invasion of hepatocellular carcinoma through the EGFR/HER2-ERK1/2 signaling pathway. PMID:32398965
Down-regulation of Long Non-coding RNA LINC01554 in Hepatocellular Cancer and its Clinical Significance. PMID:32231743
Analysis of proteins that interact with nucleocapsid protein of SARS-CoV using 15-mer phage-displayed library. PMID:32214725
Molecular Simulation of Oncostatin M and Receptor (OSM-OSMR) Interaction as a Potential Therapeutic Target for Inflammatory Bowel Disease. PMID:32195265
Long non‑coding RNA EBLN3P promotes the recovery of the function of impaired spiral ganglion neurons by competitively binding to miR‑204‑5p and regulating TMPRSS3 expression. PMID:32186779
Retrotransposons Manipulating Mammalian Skeletal Development in Chondrocytes. PMID:32106563
Linc00662 Promotes Tumorigenesis and Progression by Regulating miR-497-5p/AVL9 Axis in Colorectal Cancer. PMID:32038723
TINCR is not a non-coding RNA but encodes a protein component of cornified epidermal keratinocytes. PMID:32012357
The role of PPM1D in cancer and advances in studies of its inhibitors. PMID:32006900
Targeting long non-coding RNA HERC2P3 inhibits cell growth and migration in human gastric cancer cells. PMID:31966608
Cryo-EM structure of human type-3 inositol triphosphate receptor reveals the presence of a self-binding peptide that acts as an antagonist. PMID:31915246
Thiyl Radical Reactions in the Chemical Degradation of Pharmaceutical Proteins. PMID:31795282
Systematic construction and validation of an immune prognostic model for lung adenocarcinoma. PMID:31779055
High peroxidasin-like expression is a potential and independent prognostic biomarker in breast cancer. PMID:31689799
Nuclear FAM289-Galectin-1 interaction controls FAM289-mediated tumor promotion in malignant glioma. PMID:31492191
Original tumour suppressor gene polycystic kidney and hepatic disease 1-like 1 is associated with thyroid cancer cell progression. PMID:31452800
Differential Expression Profiles and Functional Prediction of Circular RNAs and Long Non-coding RNAs in the Hippocampus of Nrf2-Knockout Mice. PMID:31447646
Precise in vivo genome editing via single homology arm donor mediated intron-targeting gene integration for genetic disease correction. PMID:31444470
Inhibition of amyloid beta toxicity in zebrafish with a chaperone-gold nanoparticle dual strategy. PMID:31439844
Risk stratification for lung adenocarcinoma on EGFR and TP53 mutation status, chemotherapy, and PD-L1 immunotherapy. PMID:31407494
Structure, regulation, and (patho-)physiological functions of the stress-induced protein kinase CK1 delta (CSNK1D). PMID:31376410
Molecular complexity of the major urinary protein system of the Norway rat, Rattus norvegicus. PMID:31341188
Downregulation of TCEAL7 expression induces CCND1 expression in non-small cell lung cancer. PMID:31321645
Isoforms of Base Excision Repair Enzymes Produced by Alternative Splicing. PMID:31277343
A primate-specific short GluN2A-NMDA receptor isoform is expressed in the human brain. PMID:31272478
Loss of function Cbl-c mutations in solid tumors. PMID:31260484
Integrating Ligand-Receptor Interactions and In Vitro Evolution for Streamlined Discovery of Artificial Nucleic Acid Ligands. PMID:31255977
Bridging the gap between reference and real transcriptomes. PMID:31159855
Zebrafish as an Emerging Model for Bioassay-Guided Natural Product Drug Discovery for Neurological Disorders. PMID:31151179
The Transcriptomic Toolbox: Resources for Interpreting Large Gene Expression Data within a Precision Medicine Context for Metabolic Disease Atherosclerosis. PMID:31032818
[Novel tumor metastasis suppressorgene LASS2/TMSG1 S248A mutant promotes invasion of prostate cancer cells through increasing ATP6V0C expression]. PMID:30996356
Detection of novel fusion-transcripts by RNA-Seq in T-cell lymphoblastic lymphoma. PMID:30914738
Membrane metallo-endopeptidase (Neprilysin) regulates inflammatory response and insulin signaling in white preadipocytes. PMID:30795914
Mycobacterium avium subsp. paratuberculosis induces differential cytosine methylation at miR-21 transcription start site region. PMID:30774666
Long non-coding RNA LINC00662 promotes proliferation and migration in oral squamous cell carcinoma. PMID:30705593
Glycoprotein Non-Metastatic Protein B: An Emerging Biomarker for Lysosomal Dysfunction in Macrophages. PMID:30586924
Serum starvation raises turnover of phosphorylated p62/SQSTM1 (Serine 349), reveals expression of proteasome and N-glycanase1 interactive protein RAD23B and sensitizes human synovial fibroblasts to BAY 11-7085-induced cell death. PMID:30533198
Desumoylating Isopeptidase 2 (DESI2) Inhibits Proliferation and Promotes Apoptosis of Pancreatic Cancer Cells through Regulating PI3K/AKT/mTOR Signaling Pathway. PMID:30411297
Porf-2 = Arhgap39 = Vilse: A Pivotal Role in Neurodevelopment, Learning and Memory. PMID:30406180
GPCR homology model template selection benchmarking: Global versus local similarity measures. PMID:30390544
Whole-Genome Alignment and Comparative Annotation. PMID:30379572
Elevated Na/H exchanger 1 (SLC9A1) emerges as a marker for tumorigenesis and prognosis in gliomas. PMID:30333031
Placenta-specific 9, a putative secretory protein, induces G2/M arrest and inhibits the proliferation of human embryonic hepatic cells. PMID:30291214
Follistatin-like protein 5 inhibits hepatocellular carcinoma progression by inducing caspase-dependent apoptosis and regulating Bcl-2 family proteins. PMID:30255547
A kernel machine method for detecting higher order interactions in multimodal datasets: Application to schizophrenia. PMID:30184473
The long non-coding RNA FLJ46906 binds to the transcription factors NF-κB and AP-1 and regulates expression of aging-associated genes. PMID:30125263
Circulating long noncoding RNA DKFZP434I0714 predicts adverse cardiovascular outcomes in patients with end-stage renal disease. PMID:30097337
Human Cytomegalovirus UL135 Interacts with Host Adaptor Proteins To Regulate Epidermal Growth Factor Receptor and Reactivation from Latency. PMID:30089695
Role of PPAR-β/δ/miR-17/TXNIP pathway in neuronal apoptosis after neonatal hypoxic-ischemic injury in rats. PMID:30086290
Identification of a biologically active fragment of ALK and LTK-Ligand 2 (augmentor-α). PMID:30061385
Characterization of a Long Non-Coding RNA, the Antisense RNA of Na/K-ATPase α1 in Human Kidney Cells. PMID:30037072
VGLL4 is a transcriptional cofactor acting as a novel tumor suppressor via interacting with TEADs. PMID:30034932
Metabolic engineering of Saccharomyces cerevisiae for 7-dehydrocholesterol overproduction. PMID:30026807
Prognostic significance of ANLN in lung adenocarcinoma. PMID:30008873
Upregulated IQUB promotes cell proliferation and migration via activating Akt/GSK3β/β-catenin signaling pathway in breast cancer. PMID:29968965
NEDD9 targets COL3A1 to promote endothelial fibrosis and pulmonary arterial hypertension. PMID:29899023
Engineered membrane protein antigens successfully induce antibodies against extracellular regions of claudin-5. PMID:29849184
The non-human primate kidney transcriptome in fetal development. PMID:29603257
TRPM2 and warmth sensation. PMID:29552700
Cortactin regulates endo-lysosomal sorting of AMPARs via direct interaction with GluA2 subunit. PMID:29515177
TIPE3 differentially modulates proliferation and migration of human non-small-cell lung cancer cells via distinct subcellular location. PMID:29510688
Knockdown of TBRG4 affects tumorigenesis in human H1299 lung cancer cells by regulating DDIT3, CAV1 and RRM2. PMID:29387213
Functional requirement for human pitrilysin metallopeptidase 1 arginine 183, mutated in amyloidogenic neuropathy. PMID:29383861
Premature polyadenylation of MAGI3 is associated with diminished N6-methyladenosine in its large internal exon. PMID:29362392
Genome-Wide Gene-Potassium Interaction Analyses on Blood Pressure: The GenSalt Study (Genetic Epidemiology Network of Salt Sensitivity). PMID:29212900
Effects of LncRNA BC168687 siRNA on Diabetic Neuropathic Pain Mediated by P2X7 Receptor on SGCs in DRG of Rats. PMID:29204447
Crystal structure of the second fibronectin type III (FN3) domain from human collagen α1 type XX. PMID:29199991
Differential Expression of Ion Channels in Adult and Neonatal Rat Ventral Respiratory Column. PMID:29170997
TIPE2 expression is increased in peripheral blood mononuclear cells from patients with rheumatoid arthritis. PMID:29152095
Identification and expression analysis of cDNA encoding insulin-like growth factor 2 in horses. PMID:29151450
Mechanisms of HERV-K (HML-2) Transcription during Human Mammary Epithelial Cell Transformation. PMID:29046454
Novel Sarcopenia-related Alterations in Sarcomeric Protein Post-translational Modifications (PTMs) in Skeletal Muscles Identified by Top-down Proteomics. PMID:29046390
Involvement of the accumbal osteopontin-interacting transmembrane protein 168 in methamphetamine-induced place preference and hyperlocomotion in mice. PMID:29026117
Administration of 5-methoxyindole-2-carboxylic acid that potentially targets mitochondrial dihydrolipoamide dehydrogenase confers cerebral preconditioning against ischemic stroke injury. PMID:29017857
MAZ induces MYB expression during the exit from quiescence via the E2F site in the MYB promoter. PMID:28973440
The novel protein C3orf43 accelerates hepatocyte proliferation. PMID:28932249
OCIAD2 suppressed tumor growth and invasion via AKT pathway in Hepatocelluar carcinoma. PMID:28911005
Kv3 Channels: Enablers of Rapid Firing, Neurotransmitter Release, and Neuronal Endurance. PMID:28904001
MIER3 suppresses colorectal cancer progression by down-regulating Sp1, inhibiting epithelial-mesenchymal transition. PMID:28887525
Identification of KANSARL as the first cancer predisposition fusion gene specific to the population of European ancestry origin. PMID:28881586
Carboxylesterases in lipid metabolism: from mouse to human. PMID:28677105
Verification and characterization of an alternative low density lipoprotein receptor-related protein 1 splice variant. PMID:28662213
Embryonic expression patterns of Eukaryotic EndoU ribonuclease family gene endouC in zebrafish. PMID:28610924
A hormonal cue promotes timely follicle cell migration by modulating transcription profiles. PMID:28610887
Resistin increases the expression of NOD2 in mouse monocytes. PMID:28565874
Genomic structure, expression pattern, and functional characterization of transcription factor E2F-2 from black tiger shrimp (Penaeus monodon). PMID:28558060
CP5 system, for simple and highly efficient protein purification with a C-terminal designed mini tag. PMID:28542437
ERRF sensitizes ERBB2-positive breast cancer cells to lapatinib treatment likely by attenuating MCL1 and ERBB2 expression. PMID:28415602
CT120: A New Potential Target for c-Myc in Head and Neck Cancers. PMID:28382151
Identification of an RNase that preferentially cleaves A/G nucleotides. PMID:28322335
Identification of SERINC5-001 as the Predominant Spliced Isoform for HIV-1 Restriction. PMID:28275190
Toxoplasma gondii Elongation Factor 1-Alpha (TgEF-1α) Is a Novel Vaccine Candidate Antigen against Toxoplasmosis. PMID:28243226
RHCG and TCAF1 promoter hypermethylation predicts biochemical recurrence in prostate cancer patients treated by radical prostatectomy. PMID:28052017
Differential HDAC1 and 2 Recruitment by Members of the MIER Family. PMID:28046085
The Antisense Transcript SMN-AS1 Regulates SMN Expression and Is a Novel Therapeutic Target for Spinal Muscular Atrophy. PMID:28017471
Bioinformatics Analysis and Validation of the Expressed Sequences Tag in Human Colorectal Adenocarcinoma. PMID:27956963
Cell Transformation by PTP1B Truncated Mutants Found in Human Colon and Thyroid Tumors. PMID:27855221
Mutations in CPAMD8 Cause a Unique Form of Autosomal-Recessive Anterior Segment Dysgenesis. PMID:27839872
Sex chromosome loss and the pseudoautosomal region genes in hematological malignancies. PMID:27655702
The supramolecular structure of bone: X-ray scattering analysis and lateral structure modeling. PMID:27599731
The involvement of proline-rich protein Mus musculus predicted gene 4736 in ocular surface functions. PMID:27588265
Overexpression of p42.3 promotes cell proliferation, migration, and invasion in human gastric cancer cells. PMID:27449033
EGFR Signaling Regulates Maspin/SerpinB5 Phosphorylation and Nuclear Localization in Mammary Epithelial Cells. PMID:27447178
Multi-OMICs and Genome Editing Perspectives on Liver Cancer Signaling Networks. PMID:27403431
Novel Monoclonal Antibodies for Studies of Human and Rhesus Macaque Secretory Component and Human J-Chain. PMID:27386924
Acute Stress Responses Are Early Molecular Events of Retinal Degeneration in Abca4-/-Rdh8-/- Mice After Light Exposure. PMID:27315541
TNF-insulin crosstalk at the transcription factor GATA6 is revealed by a model that links signaling and transcriptomic data tensors. PMID:27273097
AGIA Tag System Based on a High Affinity Rabbit Monoclonal Antibody against Human Dopamine Receptor D1 for Protein Analysis. PMID:27271343
TRPM3 in temperature sensing and beyond. PMID:27227024
Secretion of N- and O-linked Glycoproteins from 4T1 Murine Mammary Carcinoma Cells. PMID:27226773
Variation in PPP3CC Genotype Is Associated with Long-Term Recovery after Severe Brain Injury. PMID:27225880
A Therapeutic Antibody for Cancer, Derived from Single Human B Cells. PMID:27160908
Wnt/β-catenin signaling plays an ever-expanding role in stem cell self-renewal, tumorigenesis and cancer chemoresistance. PMID:27077077
LINC00507 Is Specifically Expressed in the Primate Cortex and Has Age-Dependent Expression Patterns. PMID:27059230
Cloning of Porcine Pituitary Tumor Transforming Gene 1 and Its Expression in Porcine Oocytes and Embryos. PMID:27058238
A High-Throughput Microfluidic Platform for Mammalian Cell Transfection and Culturing. PMID:27030663
Clinical prognostic value of DNA methylation in hepatoblastoma: Four novel tumor suppressor candidates. PMID:26991471
Overexpression of long non-coding RNA LOC400891 promotes tumor progression and poor prognosis in prostate cancer. PMID:26797783
Down-regulation of C12orf59 is associated with a poor prognosis and VHL mutations in renal cell carcinoma. PMID:26758419
Protein kinase A catalytic subunit isoform PRKACA; History, function and physiology. PMID:26687711
Remodeling of retrotransposon elements during epigenetic induction of adult visual cortical plasticity by HDAC inhibitors. PMID:26673794
High Affinity Heme Binding to a Heme Regulatory Motif on the Nuclear Receptor Rev-erbβ Leads to Its Degradation and Indirectly Regulates Its Interaction with Nuclear Receptor Corepressor. PMID:26670607
Spliced leader RNA trans-splicing discovered in copepods. PMID:26621068
Protective immunity against acute toxoplasmosis in BALB/c mice induced by a DNA vaccine encoding Toxoplasma gondii elongation factor 1-alpha. PMID:26497908
RNAi-mediated RPL34 knockdown suppresses the growth of human gastric cancer cells. PMID:26323242
Identification of Glial Activation Markers by Comparison of Transcriptome Changes between Astrocytes and Microglia following Innate Immune Stimulation. PMID:26214311
Sperm Lysozyme-Like Protein 1 (SLLP1), an intra-acrosomal oolemmal-binding sperm protein, reveals filamentous organization in protein crystal form. PMID:26198801
Regulation of human MAPT gene expression. PMID:26170022
TRIM29 regulates the assembly of DNA repair proteins into damaged chromatin. PMID:26095369
Identification, Characterization, and Developmental Expression Pattern of Type III Interferon Receptor Gene in the Chinese Goose. PMID:26064884
Production of monoclonal antibodies against GPCR using cell-free synthesized GPCR antigen and biotinylated liposome-based interaction assay. PMID:26061673
A pipeline for the systematic identification of non-redundant full-ORF cDNAs for polymorphic and evolutionary divergent genomes: Application to the ascidian Ciona intestinalis. PMID:26025923
Expression of the Carboxy-Terminal Portion of MUC16/CA125 Induces Transformation and Tumor Invasion. PMID:25965947
A new mutation in exon 2 of the bone morphogenetic protein 15 gene is associated with increase in prolificacy of Mehraban and Lori sheep. PMID:25860388
Tetratricopeptide repeat domain 9A negatively regulates estrogen receptor alpha activity. PMID:25798063
An Lnc RNA (GAS5)/SnoRNA-derived piRNA induces activation of TRAIL gene by site-specifically recruiting MLL/COMPASS-like complexes. PMID:25779046
Structure of human dipeptidyl peptidase 10 (DPPY): a modulator of neuronal Kv4 channels. PMID:25740212
AHNAK2 Participates in the Stress-Induced Nonclassical FGF1 Secretion Pathway. PMID:25560297
Gammaherpesvirus infection modulates the temporal and spatial expression of SCGB1A1 (CCSP) and BPIFA1 (SPLUNC1) in the respiratory tract. PMID:25531566
The EHEC-host interactome reveals novel targets for the translocated intimin receptor. PMID:25519916
LASS2/TMSG1 inhibits growth and invasion of breast cancer cell in vitro through regulation of vacuolar ATPase activity. PMID:25501280
Betatrophin. PMID:25483956
Anti-centrosome antibodies in breast cancer are the expression of autoimmunity. PMID:25420961
The UDP-glucuronosyltransferases of the blood-brain barrier: their role in drug metabolism and detoxication. PMID:25389387
Inositol synthesis regulates the activation of GSK-3α in neuronal cells. PMID:25345501
TET2 Inhibits Differentiation of Embryonic Stem Cells but Does Not Overcome Methylation-Induced Gene Silencing. PMID:25276435
Characterization of kidney injury molecule-1 in cats. PMID:25274439
Sequence analysis and expression regulation of rbp4 by 9-cis-RA in Megalobrama amblycephala. PMID:25274419
Identification of a truncated splice variant of IL-18 receptor alpha in the human and rat, with evidence of wider evolutionary conservation. PMID:25250214
Reversible covalent inhibition of eEF-2K by carbonitriles. PMID:25224652
Prominin-1 (CD133) defines both stem and non-stem cell populations in CNS development and gliomas. PMID:25184684
O-GlcNAc-mediated interaction between VER2 and TaGRP2 elicits TaVRN1 mRNA accumulation during vernalization in winter wheat. PMID:25091017
High Phosphorylation Status of AKT/mTOR Signal in DESI2-Reduced Pancreatic Ductal Adenocarcinoma. PMID:25079376
Using the zebrafish model for Alzheimer's disease research. PMID:25071820
Association between Motilin Receptor Gene Haplotypes and Growth Traits in Japanese Hinai-dori Crossbred Chickens. PMID:25049957
IRGM rs13361189 polymorphism may contribute to susceptibility to Crohn's disease: A meta-analysis. PMID:25009628
Screening of lymph nodes metastasis associated lncRNAs in colorectal cancer patients. PMID:25009386
Inhibition of influenza virus infection and hemagglutinin cleavage by the protease inhibitor HAI-2. PMID:24978308
Presence of antigen-specific somatic allelic mutations and splice variants do not predict for immunological response to genetic vaccination. PMID:24764533
Retrotransposon hypomethylation in melanoma and expression of a placenta-specific gene. PMID:24759919
Origins and functional evolution of Y chromosomes across mammals. PMID:24759410
Transcription-associated R-loop formation across the human FMR1 CGG-repeat region. PMID:24743386
BD SIMULATIONS OF THE IONIC STRENGTH DEPENDENCE OF THE INTERACTIONS BETWEEN TRIOSE PHOSPHATE ISOMERASE AND F-ACTIN. PMID:24639622
Facile chemoenzymatic strategies for the synthesis and utilization of S-adenosyl-(L)-methionine analogues. PMID:24616228
The novel long noncoding RNA linc00467 promotes cell survival but is down-regulated by N-Myc. PMID:24586304
Comparative bioinformatics, temporal and spatial expression analyses of Ixodes scapularis organic anion transporting polypeptides. PMID:24582512
Expression and bioinformatic analysis of lymphoma-associated novel gene KIAA0372. PMID:24557625
Modulation of formation of the 3'-end of the human argininosuccinate synthetase mRNA by GT-repeat polymorphism. PMID:24380022
Expression of an innate immune element (mouse hepcidin-1) in baculovirus expression system and the comparison of its function with synthetic human hepcidin-25. PMID:24250389
RAN proteins and RNA foci from antisense transcripts in C9ORF72 ALS and frontotemporal dementia. PMID:24248382
Znf45l affects primitive hematopoiesis by regulating transforming growth factor-β signaling. PMID:24209630
Intrinsically disordered regions of nucleophosmin/B23 regulate its RNA binding activity through their inter- and intra-molecular association. PMID:24106084
Elongation factor-1α is a novel protein associated with host cell invasion and a potential protective antigen of Cryptosporidium parvum. PMID:24085304
MiR-138 downregulates miRNA processing in HeLa cells by targeting RMND5A and decreasing Exportin-5 stability. PMID:24057215
CFTR activity and mitochondrial function. PMID:24024153
Prohibitin-2 binding modulates insulin-like growth factor-binding protein-6 (IGFBP-6)-induced rhabdomyosarcoma cell migration. PMID:24003225
Binding between the junctional proteins afadin and PLEKHA7 and implication in the formation of adherens junction in epithelial cells. PMID:23990464
A plasmid toolkit for cloning chimeric cDNAs encoding customized fusion proteins into any Gateway destination expression vector. PMID:23957834
Proteomic analysis of kidneys from selenoprotein M transgenic rats in response to increased bioability of selenium. PMID:23937859
Lariat sequencing in a unicellular yeast identifies regulated alternative splicing of exons that are evolutionarily conserved with humans. PMID:23861491
A Genome-Wide Association Study Suggests Novel Loci Associated with a Schizophrenia-Related Brain-Based Phenotype. PMID:23805179
Overexpression of p42.3 promotes cell growth and tumorigenicity in hepatocellular carcinoma. PMID:23704824
Transmembrane protein 208: a novel ER-localized protein that regulates autophagy and ER stress. PMID:23691174
Proprotein convertases play an important role in regulating PKGI endoproteolytic cleavage and nuclear transport. PMID:23686857
Bacterial biosensors for screening isoform-selective ligands for human thyroid receptors α-1 and β-1. PMID:23667826
Akt1 enhances CA916798 expression through mTOR pathway. PMID:23667466
Vaccine-induced plasma IgA specific for the C1 region of the HIV-1 envelope blocks binding and effector function of IgG. PMID:23661056
Identification of a novel lipin homologue from the parasitic protozoan Trypanosoma brucei. PMID:23656927
Mechanical properties of doubly stabilized microtubule filaments. PMID:23561528
Channelopathies from mutations in the cardiac sodium channel protein complex. PMID:23557754
A stimulation-dependent alternate core promoter links lymphotoxin α expression with TGF-β1 and fibroblast growth factor-7 signaling in primary human T cells. PMID:23547113
Preparation of recombinant protein spotted arrays for proteome-wide identification of kinase targets. PMID:23546622
The C8ORF38 homologue Sicily is a cytosolic chaperone for a mitochondrial complex I subunit. PMID:23509070
Disruption of SMIM1 causes the Vel- blood type. PMID:23505126
Age-dependent decrease and alternative splicing of methionine synthase mRNA in human cerebral cortex and an accelerated decrease in autism. PMID:23437274
IGSF9 family proteins. PMID:23417431
Innate recognition of apoptotic cells: novel apoptotic cell-associated molecular patterns revealed by crossreactivity of anti-LPS antibodies. PMID:23392124
Characterization of the distal promoter of the human pyruvate carboxylase gene in pancreatic beta cells. PMID:23383084
Overlapping ATP2C1 and ASTE1 genes in human genome: implications for SPCA1 expression? PMID:23344038
The fate of the messenger is pre-determined: a new model for regulation of gene expression. PMID:23337853
CLCA splicing isoform associated with adhesion through β1-integrin and its scaffolding protein: specific expression in undifferentiated epithelial cells. PMID:23297403
Generation of a genome scale lentiviral vector library for EF1α promoter-driven expression of human ORFs and identification of human genes affecting viral titer. PMID:23251614
Crystal structure of two anti-porphyrin antibodies with peroxidase activity. PMID:23240001
Reversible inactivation of dihydrolipoamide dehydrogenase by mitochondrial hydrogen peroxide. PMID:23205777
Glycine receptor mutants of the mouse: what are possible routes of inhibitory compensation? PMID:23118727
Genomic breakpoints and clinical features of MLL-TET1 rearrangement in acute leukemias. PMID:23100278
Identification and function of myeloid differentiation factor 88 (MyD88) in Litopenaeus vannamei. PMID:23071706
Sequencing and analysis of full-length cDNAs, 5'-ESTs and 3'-ESTs from a cartilaginous fish, the elephant shark (Callorhinchus milii). PMID:23056606
Human Bop is a novel BH3-only member of the Bcl-2 protein family. PMID:23055042
Characterization, genomic organization, and expression profiles of MyD88, a key adaptor molecule in the TLR signaling pathways in miiuy croaker (Miichthys miiuy). PMID:23053604
ShRNA-targeted COMMD7 suppresses hepatocellular carcinoma growth. PMID:23049798
Analysis of cellulose synthase genes from domesticated apple identifies collinear genes WDR53 and CesA8A: partial co-expression, bicistronic mRNA, and alternative splicing of CESA8A. PMID:23048131
Role of COUP-TFI during retinoic acid-induced differentiation of P19 cells to endodermal cells. PMID:23018522
Interaction of cyclin-dependent kinase 12/CrkRS with cyclin K1 is required for the phosphorylation of the C-terminal domain of RNA polymerase II. PMID:22988298
Molecular evolution, structure, and function of peroxidasins. PMID:22976969
The candidate tumor suppressor gene Ecrg4 as a wound terminating factor in cutaneous injury. PMID:22899245
Functional genomic and high-content screening for target discovery and deconvolution. PMID:22860749
Identification of transmembrane protein 134 as a novel LMP1-binding protein by using bimolecular fluorescence complementation and an enhanced retroviral mutagen. PMID:22855487
Mouse RC/BTB2, a member of the RCC1 superfamily, localizes to spermatid acrosomal vesicles. PMID:22768142
Evidence for the putative cannabinoid receptor (GPR55)-mediated inhibitory effects on intestinal contractility in mice. PMID:22759743
Disrupted Signaling through the Fanconi Anemia Pathway Leads to Dysfunctional Hematopoietic Stem Cell Biology: Underlying Mechanisms and Potential Therapeutic Strategies. PMID:22675615
Gene expression in the ventral tegmental area of 5 pairs of rat lines selectively bred for high or low ethanol consumption. PMID:22579914
Genome abnormalities precede prostate cancer and predict clinical relapse. PMID:22569189
Zebrafish HSF4: a novel protein that shares features of both HSF1 and HSF4 of mammals. PMID:22528049
A method to determine the kinetics of multiple proteins in human infants with respiratory distress syndrome. PMID:22526637
Disentangling the relationship between sex-biased gene expression and X-linkage. PMID:22499666
Mutations in UVSSA cause UV-sensitive syndrome and destabilize ERCC6 in transcription-coupled DNA repair. PMID:22466612
Genomic profiling reveals Pitx2 controls expression of mature extraocular muscle contraction-related genes. PMID:22408009
Naturally occurring variant of mouse apolipoprotein A-I alters the lipid and HDL association properties of the protein. PMID:22402133
Potential association between frequent nonsynonymous variant of NPPA and cardioembolic stroke. PMID:22400494
Transcriptional regulation of N-acetylglutamate synthase. PMID:22383952
Comparative modeling and molecular docking of orphan human CYP4V2 protein with fatty acid substrates: Insights into substrate specificity. PMID:22355237
Role of ERRF, a novel ER-related nuclear factor, in the growth control of ER-positive human breast cancer cells. PMID:22341523
Structural and functional characterization of H2 haplotype MAPT promoter: unique neurospecific domains and a hypoxia-inducible element would enhance rationally targeted tauopathy research for Alzheimer's disease. PMID:22310385
A novel full-length isoform of murine pregnancy-specific glycoprotein 16 (psg16) is expressed in the brain but does not mediate murine coronavirus (MHV) entry. PMID:22302612
Alpha-lipoic acid attenuates atherosclerotic lesions and inhibits proliferation of vascular smooth muscle cells through targeting of the Ras/MEK/ERK signaling pathway. PMID:22302393
miR-31 and its host gene lncRNA LOC554202 are regulated by promoter hypermethylation in triple-negative breast cancer. PMID:22289355
C1q/TNF-related protein-12 (CTRP12), a novel adipokine that improves insulin sensitivity and glycemic control in mouse models of obesity and diabetes. PMID:22275362
Human PAPS synthase isoforms are dynamically regulated enzymes with access to nucleus and cytoplasm. PMID:22242175
BC047440 antisense eukaryotic expression vectors inhibited HepG2 cell proliferation and suppressed xenograft tumorigenicity. PMID:22230953
UDP-N-acetyl-α-D-galactosamine:polypeptide N-acetylgalactosaminyltransferases: completion of the family tree. PMID:22186971
A genome-wide SNP scan reveals novel loci for egg production and quality traits in white leghorn and brown-egg dwarf layers. PMID:22174844
Quantitative PCR tissue expression profiling of the human SGLT2 gene and related family members. PMID:22127746
Myotilin dynamics in cardiac and skeletal muscle cells. PMID:22021208
RAB8 enhances TMEM205-mediated cisplatin resistance. PMID:21969054
Complexity of bidirectional transcription and alternative splicing at human RCAN3 locus. PMID:21961037
Ionic strength dependence of F-actin and glycolytic enzyme associations: a Brownian dynamics simulations approach. PMID:21905108
Escaping the cut by restriction enzymes through single-strand self-annealing of host-edited 12-bp and longer synthetic palindromes. PMID:21895510
Roles of a novel molecule 'shati' in the development of methamphetamine-induced dependence. PMID:21886572
The extended granin family: structure, function, and biomedical implications. PMID:21862681
Two myristoylated alanine-rich C-kinase substrate (MARCKS) paralogs are required for normal development in zebrafish. PMID:21809467
Molecular analysis of a ras-like nuclear (Ran) gene from Penaeus monodon and its expression at the different ovarian stages of development. PMID:21748319
Characterization, expression profile, polymorphism and association of porcine NAT9 gene. PMID:21688147
Molecular cloning, sequence characterization, polymorphism and association analysis of porcine ROPN1 gene. PMID:21667248
Spag16, an axonemal central apparatus gene, encodes a male germ cell nuclear speckle protein that regulates SPAG16 mRNA expression. PMID:21655194
A Pmk1-interacting gene is involved in appressorium differentiation and plant infection in Magnaporthe oryzae. PMID:21642506
Molecular cloning and expression analysis of a zebrafish novel zinc finger protein gene rnf141. PMID:21637524
Type 2 diabetes risk variants and colorectal cancer risk: the Multiethnic Cohort and PAGE studies. PMID:21602532
Origin of secretin receptor precedes the advent of tetrapoda: evidence on the separated origins of secretin and orexin. PMID:21559418
Purification, identification, and cloning of lysoplasmalogenase, the enzyme that catalyzes hydrolysis of the vinyl ether bond of lysoplasmalogen. PMID:21515882
Expression of a novel gene FAM43B repressing cell proliferation is regulated by DNA methylation in hepatocellular carcinoma cell lines. PMID:21461611
A high-resolution linkage map for comparative genome analysis and QTL fine mapping in Asian seabass, Lates calcarifer. PMID:21457569
Expression and analysis of two novel rat organic cation transporter homologs, SLC22A17 and SLC22A23. PMID:21359964
Differential gene expression in liver and small intestine from lactating rats compared to age-matched virgin controls detects increased mRNA of cholesterol biosynthetic genes. PMID:21291544
Structural organization and expression pattern of the canine RPGRIP1 isoforms in retinal tissue. PMID:21282582
H3.5 is a novel hominid-specific histone H3 variant that is specifically expressed in the seminiferous tubules of human testes. PMID:21274551
Loss-of-function mutations of ILDR1 cause autosomal-recessive hearing impairment DFNB42. PMID:21255762
RNF152, a novel lysosome localized E3 ligase with pro-apoptotic activities. PMID:21203937
Characterization and expression analysis of the myeloid differentiation factor 88 (MyD88) in rock bream Oplegnathus fasciatus. PMID:21152988
Pathogenesis of neurotropic murine coronavirus is multifactorial. PMID:21144598
Expression of multiple membrane-associated phospholipase A1 beta transcript variants and lysophosphatidic acid receptors in Ewing tumor cells. PMID:21132378
Repeat expansion affects both transcription initiation and elongation in friedreich ataxia cells. PMID:21127046
Genome-wide association study of suicide attempts in mood disorder patients. PMID:21041247
Comparative Approach of the de novo Fatty Acid Synthesis (Lipogenesis) between Ruminant and Non Ruminant Mammalian Species: From Biochemical Level to the Main Regulatory Lipogenic Genes. PMID:21037855
NcRNA-microchip analysis: a novel approach to identify differential expression of noncoding RNAs. PMID:21037422
Revisiting iodination sites in thyroglobulin with an organ-oriented shotgun strategy. PMID:20978121
Proteomics: challenges, techniques and possibilities to overcome biological sample complexity. PMID:20948568
LNCaP Atlas: gene expression associated with in vivo progression to castration-recurrent prostate cancer. PMID:20868494
Association of CACNG6 polymorphisms with aspirin-intolerance asthmatics in a Korean population. PMID:20860846
Biophysical costs associated with tetrodotoxin resistance in the sodium channel pore of the garter snake, Thamnophis sirtalis. PMID:20820785
Identification of tumor-associated cassette exons in human cancer through EST-based computational prediction and experimental validation. PMID:20813049
Murine coronavirus receptors are differentially expressed in the central nervous system and play virus strain-dependent roles in neuronal spread. PMID:20739537
Nuclear receptors in stem cells and their therapeutic potential. PMID:20708051
Comparative analyses of B cell populations in trout kidney and mouse bone marrow: establishing "B cell signatures". PMID:20705088
New take on comparative immunology: relevance to immunotherapy. PMID:20635956
Genome-wide association study identifies a susceptibility locus at 21q21 for ventricular fibrillation in acute myocardial infarction. PMID:20622880
Elevated expression of TMEM205, a hypothetical membrane protein, is associated with cisplatin resistance. PMID:20589834
Knockout of secretin receptor reduces large cholangiocyte hyperplasia in mice with extrahepatic cholestasis induced by bile duct ligation. PMID:20578263
Knockdown of zebrafish lumican gene (zlum) causes scleral thinning and increased size of scleral coats. PMID:20551313
Butyrate stimulates IL-32alpha expression in human intestinal epithelial cell lines. PMID:20480520
Genes with relevance for early to late progression of colon carcinoma based on combined genomic and transcriptomic information from the same patients. PMID:20467480
Pre-gastrula expression of zebrafish extraembryonic genes. PMID:20423468
Characterization of a novel tektin member, TEKT5, in mouse sperm. PMID:20378928
Multiplexed massively parallel SELEX for characterization of human transcription factor binding specificities. PMID:20378718
Matrix metalloproteinase-3 is increased and participates in neuronal apoptotic signaling downstream of caspase-12 during endoplasmic reticulum stress. PMID:20368330
Nomenclature for factors of the HLA system, 2010. PMID:20356336
Identification of the rat NKG2D ligands, RAE1L and RRLT, and their role in allograft rejection. PMID:20306467
The anorexigenic action of the octadecaneuropeptide (ODN) in goldfish is mediated through the MC4R- and subsequently the CRH receptor-signaling pathways. PMID:20306309
An extended nomenclature for mammalian V-ATPase subunit genes and splice variants. PMID:20224822
RNA dust: where are the genes? PMID:20211845
Promoter choice and translational repression determine cell type-specific cell surface density of the inhibitory receptor CD85j expressed on different hematopoietic lineages. PMID:20194892
Voxelwise genome-wide association study (vGWAS). PMID:20171287
The transcriptional regulation of miR-21, its multiple transcripts, and their implication in prostate cancer. PMID:20160498
Molecular cloning and sequencing of hemoglobin-beta gene of channel catfish, Ictalurus punctatus Rafinesque. PMID:20035483
The male-determining gene SRY is a hybrid of DGCR8 and SOX3, and is regulated by the transcription factor CP2. PMID:19902333
Human UDP-glucuronosyltransferase UGT2A2: cDNA construction, expression, and functional characterization in comparison with UGT2A1 and UGT2A3. PMID:19858781
Physical and genetic interactions of yeast Cwc21p, an ortholog of human SRm300/SRRM2, suggest a role at the catalytic center of the spliceosome. PMID:19854871
The neurobiology of D-amino acid oxidase and its involvement in schizophrenia. PMID:19786963
A genome-wide association analysis identified a novel susceptible locus for pathological myopia at 11q24.1. PMID:19779542
Complex architecture and regulated expression of the Sox2ot locus during vertebrate development. PMID:19767420
The completion of the Mammalian Gene Collection (MGC). PMID:19767417
Identification of the human mitochondrial linoleoyl-coenzyme A monolysocardiolipin acyltransferase (MLCL AT-1). PMID:19737925
P2Y2 receptor transcription is increased by NF-kappa B and stimulates cyclooxygenase-2 expression and PGE2 released by intestinal epithelial cells. PMID:19734210
The TRC8 E3 ligase ubiquitinates MHC class I molecules before dislocation from the ER. PMID:19720873
Vitamin D related genes, CYP24A1 and CYP27B1, and colon cancer risk. PMID:19706847
GPD1L links redox state to cardiac excitability by PKC-dependent phosphorylation of the sodium channel SCN5A. PMID:19666841
Positive selection at codon 38 of the human KCNE1 (= minK) gene and sporadic absence of 38Ser-coding mRNAs in Gly38Ser heterozygotes. PMID:19660109
Mapping of the full length and the truncated interleukin-18 receptor alpha in the mouse brain. PMID:19640592
Acyl-CoA dehydrogenases: Dynamic history of protein family evolution. PMID:19639238
A method for preparing DNA sequencing templates using a DNA-binding microplate. PMID:19568455
Analysis of the human E2 ubiquitin conjugating enzyme protein interaction network. PMID:19549727
Species differences in cannabinoid receptor 2 (CNR2 gene): identification of novel human and rodent CB2 isoforms, differential tissue expression and regulation by cannabinoid receptor ligands. PMID:19496827
Sim4cc: a cross-species spliced alignment program. PMID:19429899
Spliceosomal proteomics in Trypanosoma brucei reveal new RNA splicing factors. PMID:19429779
High-throughput isolation of immunoglobulin genes from single human B cells and expression as monoclonal antibodies. PMID:19428587
Phosphorylation of alpha6-tubulin by protein kinase Calpha activates motility of human breast cells. PMID:19406749
Interleukin-32 expression in the pancreas. PMID:19386602
Molecular characterization of IL-32 in human endothelial cells. PMID:19364659
Gene expression during the oocyte-to-embryo transition in mammals. PMID:19363788
Differential quantitative proteomics of Porphyromonas gingivalis by linear ion trap mass spectrometry: non-label methods comparison, q-values and LOWESS curve fitting. PMID:19337574
MyoD and E-protein heterodimers switch rhabdomyosarcoma cells from an arrested myoblast phase to a differentiated state. PMID:19299559
Characterization and tissue expression of channel catfish (Ictalurus punctatus Rafinesque, 1818) ubiquitin carboxyl-terminal hydrolase L5 (UCHL5) cDNA. PMID:19266312
Identification of myo-inositol-3-phosphate synthase isoforms: characterization, expression, and putative role of a 16-kDa gamma(c) isoform. PMID:19188364
Analysis and update of the human solute carrier (SLC) gene superfamily. PMID:19164095
Essential role of spi-1-like (spi-1l) in zebrafish myeloid cell differentiation. PMID:19131555
Single nucleotide polymorphism that accompanies a missense mutation (Gln488His) impedes the dimerization of Hsp90. PMID:19130193
Human Gene and Protein Database (HGPD): a novel database presenting a large quantity of experiment-based results in human proteomics. PMID:19073703
Light and electron microscopic localization of alpha-1 adrenergic receptor immunoreactivity in the rat striatum and ventral midbrain. PMID:19068224
Comparison of caspase genes for the induction of apoptosis following gene delivery. PMID:19067254
Nuclear factor one transcription factors in CNS development. PMID:19058033
Characterization of trifluralin binding with recombinant tubulin from Trypanosoma brucei. PMID:19050925
Anoctamin/TMEM16 family members are Ca2+-activated Cl- channels. PMID:19015192
Isolation and characterisation of a delta5-fatty acid elongase from the marine microalga Pavlova salina. PMID:18987913
MELOE-1 is a new antigen overexpressed in melanomas and involved in adoptive T cell transfer efficiency. PMID:18936238
Characterization of human GTPBP3, a GTP-binding protein involved in mitochondrial tRNA modification. PMID:18852288
Tubulin proteomics: towards breaking the code. PMID:18840397
D- and L-lactate dehydrogenases during invertebrate evolution. PMID:18828920
Interaction between syntaxin 8 and HECTd3, a HECT domain ligase. PMID:18821010
Analysis of the goldfish Carassius auratus olfactory epithelium transcriptome reveals the presence of numerous non-olfactory GPCR and putative receptors for progestin pheromones. PMID:18803863
Age- and sex-dependent expression of multiple murine hepatic hydroxysteroid sulfotransferase (SULT2A) genes. PMID:18725207
Tetratricopeptide repeat domain 9A is an interacting protein for tropomyosin Tm5NM-1. PMID:18699990
C19orf48 encodes a minor histocompatibility antigen recognized by CD8+ cytotoxic T cells from renal cell carcinoma patients. PMID:18698046
The Human Pseudoautosomal Region (PAR): Origin, Function and Future. PMID:18660847
Genomic characterisation, chromosomal assignment and in vivo localisation of the canine high mobility group A1 (HMGA1) gene. PMID:18651940
Review of the multiple aspects of neurofilament functions, and their possible contribution to neurodegeneration. PMID:18649148
Molecular modeling of the axial and circumferential elastic moduli of tubulin. PMID:18621829
The actinome of Dictyostelium discoideum in comparison to actins and actin-related proteins from other organisms. PMID:18612387
Non-P450 aldehyde oxidizing enzymes: the aldehyde dehydrogenase superfamily. PMID:18611112
The PDZ and band 4.1 containing protein Frmpd1 regulates the subcellular location of activator of G-protein signaling 3 and its interaction with G-proteins. PMID:18566450
Chromosomal map of human brain malformations. PMID:18563447
Host proteins interacting with the Moloney murine leukemia virus integrase: multiple transcriptional regulators and chromatin binding factors. PMID:18554410
Molecular cloning and characterization of a novel transcript variant of Mtsarg1 gene. PMID:18551385
Novel polymorphic human UDP-glucuronosyltransferase 2A3: cloning, functional characterization of enzyme variants, comparative tissue expression, and gene induction. PMID:18523138
Progesterone stimulates the proliferation of female and male cholangiocytes via autocrine/paracrine mechanisms. PMID:18511743
The creatine transporter gene paralogous at 16p11.2 is expressed in human brain. PMID:18509488
Ribonuclease A homologues of the zebrafish: polymorphism, crystal structures of two representatives and their evolutionary implications. PMID:18508078
Regulation of plasminogen activator inhibitor-1 expression by tumor suppressor protein p53. PMID:18469003
Identification of critical amino acid residues for human iNOS functional activity. PMID:18459037
Expression of Toll-like receptors in verruca and molluscum contagiosum. PMID:18437017
The human ABC transporter pseudogene family: Evidence for transcription and gene-pseudogene interference. PMID:18405356
A novel protein, Luman/CREB3 recruitment factor, inhibits Luman activation of the unfolded protein response. PMID:18391022
Transcriptome analysis of a cDNA library from adult human epididymis. PMID:18390568
The biological function of some human transcription factor binding motifs varies with position relative to the transcription start site. PMID:18367472
NEDD4L overexpression rescues the release and infectivity of human immunodeficiency virus type 1 constructs lacking PTAP and YPXL late domains. PMID:18321968
Opossum carboxylesterases: sequences, phylogeny and evidence for CES gene duplication events predating the marsupial-eutherian common ancestor. PMID:18289373
Liver prenylated methylated protein methyl esterase is the same enzyme as Sus scrofa carboxylesterase. PMID:18273909
A biomedically enriched collection of 7000 human ORF clones. PMID:18231609
Automated production of recombinant human proteins as resource for proteome research. PMID:18226205
G-protein pathway suppressor 2 (GPS2) interacts with the regulatory factor X4 variant 3 (RFX4_v3) and functions as a transcriptional co-activator. PMID:18218630
Overexpression of OsiSAP8, a member of stress associated protein (SAP) gene family of rice confers tolerance to salt, drought and cold stress in transgenic tobacco and rice. PMID:18205020
Novel isoforms of intracellular platelet activating factor acetylhydrolase (PAFAH1b2) in human testis; encoded by alternatively spliced mRNAs. PMID:18155631
Mitochondrial expression of the two-pore domain TASK-3 channels in malignantly transformed and non-malignant human cells. PMID:18094996
The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. PMID:18089548
RMD-1, a novel microtubule-associated protein, functions in chromosome segregation in Caenorhabditis elegans. PMID:18070910
Primary ciliary dyskinesia in mice lacking the novel ciliary protein Pcdp1. PMID:18039845
Mapping of equine lentivirus receptor 1 residues critical for equine infectious anemia virus envelope binding. PMID:18032504
The full-ORF clone resource of the German cDNA Consortium. PMID:17974005
The natural product avrainvillamide binds to the oncoprotein nucleophosmin. PMID:17958425
Protein kinase C delta induces transcription of the TP53 tumor suppressor gene by controlling death-promoting factor Btf in the apoptotic response to DNA damage. PMID:17938203
Non-coding antisense transcription detected by conventional and single-stranded cDNA microarray. PMID:17727707
The interferon-alpha responsive gene TMEM7 suppresses cell proliferation and is downregulated in human hepatocellular carcinoma. PMID:17693185
Marine glutathione S-transferases. PMID:17682821
A novel molecule "shati" is involved in methamphetamine-induced hyperlocomotion, sensitization, and conditioned place preference. PMID:17626222
A novel testis ubiquitin-binding protein gene arose by exon shuffling in hominoids. PMID:17623810
The potential of high-content high-throughput microscopy in drug discovery. PMID:17603554
Genome-wide maps of chromatin state in pluripotent and lineage-committed cells. PMID:17603471
Alternative splicing of the FGF antisense gene: differential subcellular localization in human tissues and esophageal adenocarcinoma. PMID:17569023
Distinct class of putative "non-conserved" promoters in humans: comparative studies of alternative promoters of human and mouse genes. PMID:17567985
Characterization of an enhancer region of the galanin gene that directs expression to the dorsal root ganglion and confers responsiveness to axotomy. PMID:17567818
Large-scale identification of human genes implicated in epidermal barrier function. PMID:17562024
Alternative promoters and repetitive DNA elements define the species-dependent tissue-specific expression of the FMO1 genes of human and mouse. PMID:17547558
Ion channel gene expression in the inner ear. PMID:17541769
Intrinsic promoter activities of primary DNA sequences in the human genome. PMID:17522093
Virtual Northern analysis of the human genome. PMID:17520019
The zinc finger proteins ZXDA and ZXDC form a complex that binds CIITA and regulates MHC II gene transcription. PMID:17493635
Expression of recombinant protein encoded by LOC387715 in Escherichia coli. PMID:17485225
Maturation of the mammalian secretome. PMID:17472737
Differential association of phosphatidylinositol 3-kinase, SHIP-1, and PTEN with forming phagosomes. PMID:17442886
The role of a single-stranded nucleotide loop in transcriptional regulation of the human sod2 gene. PMID:17426024
X chromosome cDNA microarray screening identifies a functional PLP2 promoter polymorphism enriched in patients with X-linked mental retardation. PMID:17416750
Human sterile alpha motif domain 9, a novel gene identified as down-regulated in aggressive fibromatosis, is absent in the mouse. PMID:17407603
Porcine transcriptome analysis based on 97 non-normalized cDNA libraries and assembly of 1,021,891 expressed sequence tags. PMID:17407547
Expression of PPARalpha modifies fatty acid effects on insulin secretion in uncoupling protein-2 knockout mice. PMID:17341307
Osteopontin expression and function within the dorsal root ganglion. PMID:17301681
Mitochondrial protein import and human health and disease. PMID:17300922
Erythroid Krüppel-like factor directly activates the basic Krüppel-like factor gene in erythroid cells. PMID:17283065
Liquid chromatography mass spectrometry profiling of histones. PMID:17254850
Multivariate analysis and visualization of splicing correlations in single-gene transcriptomes. PMID:17233916
DiscoverySpace: an interactive data analysis application. PMID:17210078
hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. PMID:17207965
Transcriptional changes common to human cocaine, cannabis and phencyclidine abuse. PMID:17205118
The alliance for cellular signaling plasmid collection: a flexible resource for protein localization studies and signaling pathway analysis. PMID:17192258
Entrez Gene: gene-centered information at NCBI. PMID:17148475
PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. PMID:17145712
PlasmID: a centralized repository for plasmid clone information and distribution. PMID:17132831
Immunological evaluation of urinary trypsin inhibitors in blood and urine: role of N- & O-linked glycoproteins. PMID:17115277
CAFTAN: a tool for fast mapping, and quality assessment of cDNAs. PMID:17064411
Mutation and evolutionary analyses identify NR2E1-candidate-regulatory mutations in humans with severe cortical malformations. PMID:17054721
Analysis of candidate genes on chromosome 2 in oral cleft case-parent trios from three populations. PMID:16953426
Palmitoyl transferase activity of lecithin retinol acyl transferase. PMID:16939223
NMR assignment of a human cancer-related nucleoside triphosphatase. PMID:16933021
Pairagon+N-SCAN_EST: a model-based gene annotation pipeline. PMID:16925839
Statistical methods and software for the analysis of highthroughput reverse genetic assays using flow cytometry readouts. PMID:16916453
Large-scale identification and characterization of alternative splicing variants of human gene transcripts using 56,419 completely sequenced and manually annotated full-length cDNAs. PMID:16914452
L1 antisense promoter drives tissue-specific transcription of human genes. PMID:16877819
TACT: Transcriptome Auto-annotation Conducting Tool of H-InvDB. PMID:16845023
Diversity in transcriptional start site selection and alternative splicing affects the 5'-UTR of mouse striated muscle myosin transcripts. PMID:16819597
Differential expression of a C-terminal splice variant of phosphatidylinositol transfer protein beta lacking the constitutive-phosphorylated Ser262 that localizes to the Golgi compartment. PMID:16780419
ELMOD2 is a candidate gene for familial idiopathic pulmonary fibrosis. PMID:16773575
Identification and characterisation of human apoptosis inducing proteins using cell-based transfection microarrays and expression analysis. PMID:16768789
Use of a penetratin-linked peptide in Dictyostelium. PMID:16757799
Identification and characterization of piggyBac-like elements in the genome of domesticated silkworm, Bombyx mori. PMID:16685528
Complex Loci in human and mouse genomes. PMID:16683030
BACE1 gene promoter is differentially regulated: detection of a novel promoter region for its cell type-specific regulation. PMID:16679558
Sequencing and analysis of 10,967 full-length cDNA clones from Xenopus laevis and Xenopus tropicalis reveals post-tetraploidization transcriptome remodeling. PMID:16672307
Expression of protein kinase CK2 in astroglial cells of normal and neovascularized retina. PMID:16651637
Synphilin-1A: an aggregation-prone isoform of synphilin-1 that causes neuronal death and is present in aggregates from alpha-synucleinopathy patients. PMID:16595633
Familial hypercatabolic hypoproteinemia caused by deficiency of the neonatal Fc receptor, FcRn, due to a mutant beta2-microglobulin gene. PMID:16549777
Deciphering cellular states of innate tumor drug responses. PMID:16542501
The 3of5 web application for complex and comprehensive pattern matching in protein sequences. PMID:16542452
Myoinformatics report: myosin regulatory light chain paralogs in the human genome. PMID:16538438
Modification of the Creator recombination system for proteomics applications--improved expression by addition of splice sites. PMID:16519801
Cell surface transglutaminase promotes RhoA activation via integrin clustering and suppression of the Src-p190RhoGAP signaling pathway. PMID:16452636
Genetic analysis of the cytoplasmic dynein subunit families. PMID:16440056
In silico discovery of human natural antisense transcripts. PMID:16409644
The LIFEdb database in 2006. PMID:16381901
L1 integration in a transgenic mouse model. PMID:16365384
The autoregulatory translational control element of poly(A)-binding protein mRNA forms a heteromeric ribonucleoprotein complex. PMID:16356927
Identification of novel Y chromosome encoded transcripts by testis transcriptome analysis of mice with deletions of the Y chromosome long arm. PMID:16356265
A mouse atlas of gene expression: large-scale digital gene-expression profiles from precisely defined developing C57BL/6J mouse tissues and cells. PMID:16352711
Abundant novel transcriptional units and unconventional gene pairs on human chromosome 22. PMID:16344557
mRNA differential display identification of vascular smooth muscle early response genes regulated by PDGF. PMID:16328958
Chromatin immunoprecipitation-based screen to identify functional genomic binding sites for sequence-specific transactivators. PMID:16260627
The CNA1 histone of the ciliate Tetrahymena thermophila is essential for chromosome segregation in the germline micronucleus. PMID:16251352
Protein production and crystallization at the joint center for structural genomics. PMID:16211502
CHIP suppresses polyglutamine aggregation and toxicity in vitro and in vivo. PMID:16207874
Evidence that public database records for many cancer-associated genes reflect a splice form found in tumors and lack normal splice forms. PMID:16147986
A method for finding single-nucleotide polymorphisms with allele frequencies in sequences of deep coverage. PMID:16146575
Growth inhibition of cultured human liver carcinoma cells by Ki-energy (life-energy): scientific evidence for Ki-effects on cancer cells. PMID:16136218
Structural analysis of cDNAs coding for 4SNc-Tudor domain protein from fish and their expression in yellowtail organs. PMID:16132464
A novel polymorphism in the 5' untranslated region of the porcine cytochrome b5 (CYB5) gene is associated with decreased fat androstenone level. PMID:16104384
An Oct-1 binding site mediates activation of the gata2 promoter by BMP signaling. PMID:16061939
Alternative pre-mRNA processing regulates cell-type specific expression of the IL4l1 and NUP62 genes. PMID:16029492
LIM-homeodomain genes in mammalian development and human disease. PMID:16022279
Developmental and regional expression and localization of mRNAs encoding proteins involved in RNA translocation. PMID:16009965
A novel high-throughput (HTP) cloning strategy for site-directed designed chimeragenesis and mutation using the Gateway cloning system. PMID:16009811
Analysis and update of the human aldehyde dehydrogenase (ALDH) gene family. PMID:16004729
Examples of the complex architecture of the human transcriptome revealed by RACE and high-density tiling arrays. PMID:15998911
Replacement by Drosophila melanogaster protamines and Mst77F of histones during chromatin condensation in late spermatids and role of sesame in the removal of these proteins from the male pronucleus. PMID:15988027
Functional analysis of the BIN 2 genes of cotton. PMID:15973517
Enhanced detergent extraction for analysis of membrane proteomes by two-dimensional gel electrophoresis. PMID:15941475
Improved approach to identify cancer-associated autoantigens. PMID:15893717
Induction of Nod1 and Nod2 intracellular pattern recognition receptors in murine osteoblasts following bacterial challenge. PMID:15845503
Comparative gene finding in chicken indicates that we are closing in on the set of multi-exonic widely expressed human genes. PMID:15809229
Histone deacetylase 3 (HDAC3) activity is regulated by interaction with protein serine/threonine phosphatase 4. PMID:15805470
Impact of the SpeB protease on binding of the complement regulatory proteins factor H and factor H-like protein 1 by Streptococcus pyogenes. PMID:15784545
Crystal structure of THEP1 from the hyperthermophile Aquifex aeolicus: a variation of the RecA fold. PMID:15777481
Gamma-BAR, a novel AP-1-interacting protein involved in post-Golgi trafficking. PMID:15775984
A novel replication-independent histone H2a gene in mouse. PMID:15720718
Novel rab GAP-like protein, CIP85, interacts with connexin43 and induces its degradation. PMID:15709751
Mitochondrial ATP synthase: a bioinformatic approach reveals new insights about the roles of supernumerary subunits g and A6L. PMID:15692730
Structure of palmitoylated BET3: insights into TRAPP complex assembly and membrane localization. PMID:15692564
The crystal structure of human adenylate kinase 6: An adenylate kinase localized to the cell nucleus. PMID:15630091
Structures of thymidine kinase 1 of human and mycoplasmic origin. PMID:15611477
Entrez Gene: gene-centered information at NCBI. PMID:15608257
Evaluation of vector-primed cDNA library production from microgram quantities of total RNA. PMID:15601994
Bifunctional promoter of type IV collagen COL4A5 and COL4A6 genes regulates the expression of alpha5 and alpha6 chains in a distinct cell-specific fashion. PMID:15598179
Identification of adipocyte adhesion molecule (ACAM), a novel CTX gene family, implicated in adipocyte maturation and development of obesity. PMID:15563274
A mutation in a novel ATP-dependent Lon protease gene in a kindred with mild mental retardation. PMID:15557513
The impact of MECP2 mutations in the expression patterns of Rett syndrome patients. PMID:15549394
Coding sequences of functioning human genes derived entirely from mobile element sequences. PMID:15546984
Widespread A-to-I RNA editing of Alu-containing mRNAs in the human transcriptome. PMID:15534692
From ORFeome to biology: a functional genomics pipeline. PMID:15489336
Human ORFeome version 1.1: a platform for reverse proteomics. PMID:15489335
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). PMID:15489334
Systematic recovery and analysis of full-ORF human cDNA clones. PMID:15489330
1274 full-open reading frames of transcripts expressed in the developing mouse nervous system. PMID:15489326
Analysis of human mRNAs with the reference genome sequence reveals potential errors, polymorphisms, and RNA editing. PMID:15489323
Kinetic investigation of human dipeptidyl peptidase II (DPPII)-mediated hydrolysis of dipeptide derivatives and its identification as quiescent cell proline dipeptidase (QPP)/dipeptidyl peptidase 7 (DPP7). PMID:15487984
Gene prediction and verification in a compact genome with numerous small introns. PMID:15479946
Structure and tropomyosin binding properties of the N-terminal capping domain of tropomodulin 1. PMID:15475586
Relative gene-silencing efficiencies of small interfering RNAs targeting sense and antisense transcripts from the same genetic locus. PMID:15333693
Finding fusion genes resulting from chromosome rearrangement by analyzing the expressed sequence databases. PMID:15326299
Multiple CC chemokines in channel catfish and blue catfish as revealed by analysis of expressed sequence tags. PMID:15309344
Discriminatory aptamer reveals serum response element transcription regulated by cytohesin-2. PMID:15277685
Genomewide linkage scan for myopia susceptibility loci among Ashkenazi Jewish families shows evidence of linkage on chromosome 22q12. PMID:15273935
5' Long serial analysis of gene expression (LongSAGE) and 3' LongSAGE for transcriptome characterization and genome annotation. PMID:15272081
A protein interaction framework for human mRNA degradation. PMID:15231747
Genomic analysis of mouse retinal development. PMID:15226823
Biological functions of melanoma-associated antigens. PMID:15222021
A transcript finishing initiative for closing gaps in the human transcriptome. PMID:15197164
Integrative annotation of 21,037 human genes validated by full-length cDNA clones. PMID:15103394
Detection and evaluation of intron retention events in the human transcriptome. PMID:15100430
High-throughput gene discovery in the rat. PMID:15060017
Small interfering RNA production by enzymatic engineering of DNA (SPEED). PMID:15024103
Sequence organization and matrix attachment regions of the human serine protease inhibitor gene cluster at 14q32.1. PMID:15014966
Statistical analysis of over-represented words in human promoter sequences. PMID:14963262
Numerous novel annotations of the human genome sequence supported by a 5'-end-enriched cDNA collection. PMID:14962985
ORFDB: an information resource linking scientific content to a high-quality Open Reading Frame (ORF) collection. PMID:14681490
The Mouse SAGE Site: database of public mouse SAGE libraries. PMID:14681462
The Eukaryotic Promoter Database EPD: the impact of in silico primer extension. PMID:14681364
Analysis of the gene-dense major histocompatibility complex class III region and its comparison to mouse. PMID:14656967
Identification and characterization of multi-species conserved sequences. PMID:14656959
The German cDNA network: cDNAs, functional genomics and proteomics. PMID:14649292
A panoramic view of gene expression in the human kidney. PMID:14595018
Structure-function analysis of HKE4, a member of the new LIV-1 subfamily of zinc transporters. PMID:14525538
Identification of a family of cAMP response element-binding protein coactivators by genome-scale functional analysis in mammalian cells. PMID:14506290
Molecular phylogeny of the kelch-repeat superfamily reveals an expansion of BTB/kelch proteins in animals. PMID:13678422
PromoSer: A large-scale mammalian promoter and transcription start site identification service. PMID:12824364
DNA book. PMID:12819147
Targeting a complex transcriptome: the construction of the mouse full-length cDNA encyclopedia. PMID:12819125
The mammalian gene collection PubMed citations: 89.

89 articles citing: The mammalian gene collection

Broadening the Toolkit for Quantitatively Evaluating Noncanonical Amino Acid Incorporation in Yeast. PMID:34730946
RNA-mediated translation regulation in viral genomes: computational advances in the recognition of sequences and structures. PMID:31204430
The NCATS BioPlanet - An Integrated Platform for Exploring the Universe of Cellular Signaling Pathways for Toxicology, Systems Biology, and Chemical Genomics. PMID:31133849
The Transcriptomic Toolbox: Resources for Interpreting Large Gene Expression Data within a Precision Medicine Context for Metabolic Disease Atherosclerosis. PMID:31032818
DeepGSR: an optimized deep-learning structure for the recognition of genomic signals and regions. PMID:30184052
Functional G-Protein-Coupled Receptor (GPCR) Synthesis: The Pharmacological Analysis of Human Histamine H1 Receptor (HRH1) Synthesized by a Wheat Germ Cell-Free Protein Synthesis System Combined with Asolectin Glycerosomes. PMID:29467651
Identification of targets of tumor suppressor microRNA-34a using a reporter library system. PMID:28356515
Cytolethal distending toxins require components of the ER-associated degradation pathway for host cell entry. PMID:25078082
Exploration of panviral proteome: high-throughput cloning and functional implications in virus-host interactions. PMID:24955142
Preparation of recombinant protein spotted arrays for proteome-wide identification of kinase targets. PMID:23546622
USP4 is regulated by AKT phosphorylation and directly deubiquitylates TGF-β type I receptor. PMID:22706160
Target selection for structural genomics based on combining fold recognition and crystallisation prediction methods: application to the human proteome. PMID:22354707
Site-specific chemical modification of a glycoprotein fragment expressed in yeast. PMID:21674341
The Mouse Tumor Biology Database (MTB): a central electronic resource for locating and integrating mouse tumor pathology data. PMID:21282667
Gene expression profiling reveals distinct cocaine-responsive genes in human fetal CNS cell types. PMID:20948987
Genome-wide misexpression of X-linked versus autosomal genes associated with hybrid male sterility. PMID:20511493
Sequencing, analysis, and annotation of expressed sequence tags for Camelus dromedarius. PMID:20502665
The UCSC genome browser: what every molecular biologist should know. PMID:19816931
The completion of the Mammalian Gene Collection (MGC). PMID:19767417
A score system for quality evaluation of RNA sequence tags: an improvement for gene expression profiling. PMID:19500384
A HUPO test sample study reveals common problems in mass spectrometry-based proteomics. PMID:19448641
Noisy splicing, more than expression regulation, explains why some exons are subject to nonsense-mediated mRNA decay. PMID:19442261
Gene expression during the oocyte-to-embryo transition in mammals. PMID:19363788
Characterization of human lysophospholipid acyltransferase 3. PMID:19351971
Differential quantitative proteomics of Porphyromonas gingivalis by linear ion trap mass spectrometry: non-label methods comparison, q-values and LOWESS curve fitting. PMID:19337574
Interview with Duncan Campbell: after the draft sequence, what next for the human genome mapping project resource centre? PMID:18628912
The use of multiple displacement amplification to amplify complex DNA libraries. PMID:18285362
A Protein Structure Initiative approach to expression, purification, and in situ delivery of human cytochrome b5 to membrane vesicles. PMID:18226920
Assessment of programs for ligand binding affinity prediction. PMID:18172838
Targeted discovery of novel human exons by comparative genomics. PMID:17989246
LongSAGE profiling of nine human embryonic stem cell lines. PMID:17570852
DiscoverySpace: an interactive data analysis application. PMID:17210078
hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. PMID:17207965
The mouse Gene Expression Database (GXD): 2007 update. PMID:17130151
Pairagon+N-SCAN_EST: a model-based gene annotation pipeline. PMID:16925839
SAGE2Splice: unmapped SAGE tags reveal novel splice junctions. PMID:16683015
ASEtrap: a biological method for speeding up the exploration of spliceomes. PMID:16682744
A comprehensive catalog of human KRAB-associated zinc finger genes: insights into the evolutionary history of a large family of transcriptional repressors. PMID:16606702
Modification of the Creator recombination system for proteomics applications--improved expression by addition of splice sites. PMID:16519801
A mouse atlas of gene expression: large-scale digital gene-expression profiles from precisely defined developing C57BL/6J mouse tissues and cells. PMID:16352711
Rapid and efficient cDNA library screening by self-ligation of inverse PCR products (SLIP). PMID:16326860
Protein production and crystallization at the joint center for structural genomics. PMID:16211502
Evidence that public database records for many cancer-associated genes reflect a splice form found in tumors and lack normal splice forms. PMID:16147986
Three-dimensional structure of the AAH26994.1 protein from Mus musculus, a putative eukaryotic Urm1. PMID:16046629
Examples of the complex architecture of the human transcriptome revealed by RACE and high-density tiling arrays. PMID:15998911
Akt/protein kinase B-dependent phosphorylation and inactivation of WEE1Hu promote cell cycle progression at G2/M transition. PMID:15964826
Renalase is a novel, soluble monoamine oxidase that regulates cardiac function and blood pressure. PMID:15841207
Promoter features related to tissue specificity as measured by Shannon entropy. PMID:15833120
Comparative gene finding in chicken indicates that we are closing in on the set of multi-exonic widely expressed human genes. PMID:15809229
Osteo-Promoter Database (OPD) -- promoter analysis in skeletal cells. PMID:15790428
Results from high-throughput DNA cloning of Arabidopsis thaliana target genes using site-specific recombination. PMID:15750721
EAnnot: a genome annotation tool using experimental evidence. PMID:15574829
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). PMID:15489334
Systematic recovery and analysis of full-ORF human cDNA clones. PMID:15489330
Analysis of human mRNAs with the reference genome sequence reveals potential errors, polymorphisms, and RNA editing. PMID:15489323
A genome annotation-driven approach to cloning the human ORFeome. PMID:15461802
A comprehensive transcript index of the human genome generated using microarrays and computational approaches. PMID:15461792
Comparative analysis of gene expression for convergent evolution of camera eye between octopus and human. PMID:15289475
The gamma2 subunit of GABA(A) receptors is a substrate for palmitoylation by GODZ. PMID:15229235
A transcript finishing initiative for closing gaps in the human transcriptome. PMID:15197164
Integrative annotation of 21,037 human genes validated by full-length cDNA clones. PMID:15103394
Small interfering RNA production by enzymatic engineering of DNA (SPEED). PMID:15024103
Numerous novel annotations of the human genome sequence supported by a 5'-end-enriched cDNA collection. PMID:14962985
The multiassembly problem: reconstructing multiple transcript isoforms from EST fragment mixtures. PMID:14962984
The Mouse Genome Database (MGD): integrating biology with the genome. PMID:14681461
The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. PMID:12975309
MGAlignIt: A web service for the alignment of mRNA/EST and genomic sequences. PMID:12824360
Connecting sequence and biology in the laboratory mouse. PMID:12819150
Assessment of SAGE in transcript identification. PMID:12743019
Identification and functional analysis of human transcriptional promoters. PMID:12566409
Discovery of the breast cancer gene BASE using a molecular approach to enrich for genes encoding membrane and secreted proteins. PMID:12538848
Reevaluating human gene annotation: a second-generation analysis of chromosome 22. PMID:12529303
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. PMID:12477932
Sushi gets serious: the draft genome sequence of the pufferfish Fugu rubripes. PMID:12225591
An anatomy of normal and malignant gene expression. PMID:12119410
Long-range heterogeneity at the 3' ends of human mRNAs. PMID:12097343
Systematic sequencing of cDNA clones using the transposon Tn5. PMID:12034835
An efficient strategy for large-scale high-throughput transposon-mediated sequencing of cDNA clones. PMID:12034834
Novel fluorescence labeling and high-throughput assay technologies for in vitro analysis of protein interactions. PMID:11875038
Visual arrestins in olfactory pathways of Drosophila and the malaria vector mosquito Anopheles gambiae. PMID:11792843
The Eukaryotic Promoter Database, EPD: new entry types and links to gene expression data. PMID:11752326
The contribution of 700,000 ORF sequence tags to the definition of the human transcriptome. PMID:11593022
Navigating the human transcriptome. PMID:11592992
Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method. PMID:11544199
Molecular profiling of clinical tissues specimens: feasibility and applications. PMID:11272889
Toward a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs. PMID:11230166
Gene expression profiling in the human hypothalamus-pituitary-adrenal axis and full-length cDNA cloning. PMID:10931946
Current awareness on comparative and functional genomics [bibliography]. PMID:10797602
Molecular profiling of clinical tissue specimens: feasibility and applications. PMID:10751334

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human and other vertebrate genomes
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

human orfs
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

gene transcripts
metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:03.248757

human biology
metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:03.248757

gene expression
metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:03.248757

sequencing
metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:03.248757

molecular interactions, pathways and networks
metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:03.248757

human and other vertebrate genomes human orfs gene transcripts human gene expression sequencing molecular interactions, pathways and networks

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Human Gene and Protein Database

ORFDB

NCBI Clone DB

SOURCE

ACID

AceView Worm Genome

Hoppsigen

Expressed Sequence Tags database

NEIBank

QTL Matchmaker

Functional ANnoTation Of the Mammalian genome Database

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The Consensus CDS

Gene Expression Barcode

Human Reference Protein Interactome Mapping Project

ExoLocator

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Mouse Phenome Database