FlyMine
Names
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FlyMine
metasource: Fairsharing.org
version: FAIRsharing.org: FlyMine; FlyMine; DOI: https://doi.org/10.25504/FAIRsharing.rhpjhv; Last edited: March 10, 2021, 2:45 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
metasource: bio.tools
version: extracted_at: 2022-11-04T11:26:57.432616
flymine
metasource: bio.tools
version: extracted_at: 2022-11-04T11:26:57.432616
Names
More detailed information about this field from each metasource.
FlyMine
metasource: Fairsharing.orgversion: FAIRsharing.org: FlyMine; FlyMine; DOI: https://doi.org/10.25504/FAIRsharing.rhpjhv; Last edited: March 10, 2021, 2:45 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
metasource: bio.tools
version: extracted_at: 2022-11-04T11:26:57.432616
flymine
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:26:57.432616
Names
More detailed information about this field from each metasource.
FlyMine
metasource: Fairsharing.orgversion: FAIRsharing.org: FlyMine; FlyMine; DOI: https://doi.org/10.25504/FAIRsharing.rhpjhv; Last edited: March 10, 2021, 2:45 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
metasource: bio.tools
version: extracted_at: 2022-11-04T11:26:57.432616
flymine
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:26:57.432616
FlyMine is an integrated database of genomic, expression and protein data for Drosophila, Anopheles and C. elegans. Its main focus is genomic and proteomics data for Drosophila and other insects. It provides access to integrated data at a number of different levels, from browsing to construction of complex queries, which can be executed on either single items or lists.
Description
More detailed information about this field from each metasource.
FlyMine is an integrated database of genomic, expression and protein data for Drosophila, Anopheles and C. elegans. Its main focus is genomic and proteomics data for Drosophila and other insects. It provides access to integrated data at a number of different levels, from browsing to construction of complex queries, which can be executed on either single items or lists.
metasource: Fairsharing.orgversion: FAIRsharing.org: FlyMine; FlyMine; DOI: https://doi.org/10.25504/FAIRsharing.rhpjhv; Last edited: March 10, 2021, 2:45 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
FlyMine is an integrated database of genomic, expression and protein data for Drosophila, Anopheles and C. elegans. Integrating data makes it possible to run sophisticated data mining queries that span domains of biological knowledge.
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
An integrated database for Drosophila and Anopheles genomics.
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:26:57.432616
Webpage:
https://www.flymine.orgWebpage
More detailed information about this field from each metasource.
https://www.flymine.org
metasource: Fairsharing.orgversion: FAIRsharing.org: FlyMine; FlyMine; DOI: https://doi.org/10.25504/FAIRsharing.rhpjhv; Last edited: March 10, 2021, 2:45 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
http://www.flymine.org/
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
https://flymine.org/flymine
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:26:57.432616
Licence:
Name: LGPL-2.1Licence name
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Publications:
Publications
More detailed information about this field from each metasource.
FlyMine: an integrated database for Drosophila and Anopheles genomics
PMID: 17615057
metasource: Fairsharing.org
version: FAIRsharing.org: FlyMine; FlyMine; DOI: https://doi.org/10.25504/FAIRsharing.rhpjhv; Last edited: March 10, 2021, 2:45 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
http://dx.doi.org/10.1186/gb-2007-8-7-r129
metasource: bio.tools
version: extracted_at: 2022-11-04T11:26:57.432616
http://dx.doi.org/10.1093/bioinformatics/bts577
metasource: bio.tools
version: extracted_at: 2022-11-04T11:26:57.432616
Publications
More detailed information about this field from each metasource.
FlyMine: an integrated database for Drosophila and Anopheles genomics
PMID: 17615057
metasource: Fairsharing.org
version: FAIRsharing.org: FlyMine; FlyMine; DOI: https://doi.org/10.25504/FAIRsharing.rhpjhv; Last edited: March 10, 2021, 2:45 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
http://dx.doi.org/10.1186/gb-2007-8-7-r129
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:26:57.432616
http://dx.doi.org/10.1093/bioinformatics/bts577
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:26:57.432616
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FlyMine: an integrated database for Drosophila and Anopheles genomics
PubMed citations: 203.
203 articles citing: FlyMine: an integrated database for Drosophila and Anopheles genomics
REDfly: An Integrated Knowledgebase for Insect Regulatory Genomics. PMID:35886794
HumanMine: advanced data searching, analysis and cross-species comparison. PMID:35820040
Transcription factor Acj6 controls dendrite targeting via a combinatorial cell-surface code. PMID:35613619
ASC proneural factors are necessary for chromatin remodeling during neuroectodermal to neuroblast fate transition to ensure the timely initiation of the neural stem cell program. PMID:35549704
The role of insulators and transcription in 3D chromatin organization of flies. PMID:35354608
The life history of Drosophila sperm involves molecular continuity between male and female reproductive tracts. PMID:35254899
Fly Cell Atlas: A single-nucleus transcriptomic atlas of the adult fruit fly. PMID:35239393
The Ribosomal Protein RpL22 Interacts In Vitro with 5'-UTR Sequences Found in Some Drosophila melanogaster Transposons. PMID:35205350
Loss of miR-34 in Drosophila dysregulates protein translation and protein turnover in the aging brain. PMID:35166006
Sirt6 regulates lifespan in Drosophila melanogaster. PMID:35091469
Capturing the transcription factor interactome in response to sub-lethal insecticide exposure. PMID:34977825
Natural variation in the transcriptional response of Drosophila melanogaster to oxidative stress. PMID:34747443
Glial AP1 is activated with aging and accelerated by traumatic brain injury. PMID:34723199
Genome-wide phenotypic RNAi screen in the Drosophila wing: global parameters. PMID:34599819
Ribosome heterogeneity in Drosophila melanogaster gonads through paralog-switching. PMID:34283226
Primordial super-enhancers: heat shock-induced chromatin organization in yeast. PMID:34001402
Analysis of cell-type-specific chromatin modifications and gene expression in Drosophila neurons that direct reproductive behavior. PMID:33901168
Transneuronal Dpr12/DIP-δ interactions facilitate compartmentalized dopaminergic innervation of Drosophila mushroom body axons. PMID:33847376
"Adopt-a-Tissue" Initiative Advances Efforts to Identify Tissue-Specific Histone Marks in the Mare. PMID:33841506
Drosophila Fezf functions as a transcriptional repressor to direct layer-specific synaptic connectivity in the fly visual system. PMID:33766917
Differential gene expression in a tripartite interaction: Drosophila, Spiroplasma and parasitic wasps. PMID:33717711
Methods and tools for spatial mapping of single-cell RNAseq clusters in Drosophila. PMID:33713129
Drosophila MOV10 regulates the termination of midgut regeneration. PMID:33693718
Characterizing the genetic basis of copper toxicity in Drosophila reveals a complex pattern of allelic, regulatory, and behavioral variation. PMID:33683361
Single-cell transcriptomes of developing and adult olfactory receptor neurons in Drosophila. PMID:33555999
Temporal evolution of single-cell transcriptomes of Drosophila olfactory projection neurons. PMID:33427646
Feature Selection for Topological Proximity Prediction of Single-Cell Transcriptomic Profiles in Drosophila Embryo Using Genetic Algorithm. PMID:33379262
Constitutive activation of cellular immunity underlies the evolution of resistance to infection in Drosophila. PMID:33357377
3D genome evolution and reorganization in the Drosophila melanogaster species group. PMID:33284803
Genomics of Recombination Rate Variation in Temperature-Evolved Drosophila melanogaster Populations. PMID:33247719
Computational tools for geroscience. PMID:33241167
Maintenance of Cell Fate by the Polycomb Group Gene Sex Combs Extra Enables a Partial Epithelial Mesenchymal Transition in Drosophila. PMID:33051260
Unraveling the Genetic Basis for the Rapid Diversification of Male Genitalia between Drosophila Species. PMID:32931587
Gene expression networks in the Drosophila Genetic Reference Panel. PMID:32144088
Genome Architecture Facilitates Phenotypic Plasticity in the Honeybee (Apis mellifera). PMID:32134461
The PIWI protein Aubergine recruits eIF3 to activate translation in the germ plasm. PMID:32132673
The Drosophila Post-mating Response: Gene Expression and Behavioral Changes Reveal Perdurance and Variation in Cross-Tissue Interactions. PMID:31907222
The SUMO Ligase Su(var)2-10 Controls Hetero- and Euchromatic Gene Expression via Establishing H3K9 Trimethylation and Negative Feedback Regulation. PMID:31901448
The TargetMine Data Warehouse: Enhancement and Updates. PMID:31649722
The transcription factor odd-paired regulates temporal identity in transit-amplifying neural progenitors via an incoherent feed-forward loop. PMID:31329099
Core transcriptional signatures of phase change in the migratory locust. PMID:31292921
Comparative Expression Profiling of Wild Type Drosophila Malpighian Tubules and von Hippel-Lindau Haploinsufficient Mutant. PMID:31191337
Chromatin architecture reorganization during neuronal cell differentiation in Drosophila genome. PMID:30709849
Neuroblast-specific open chromatin allows the temporal transcription factor, Hunchback, to bind neuroblast-specific loci. PMID:30694180
Transcriptomic meta-signatures identified in Anopheles gambiae populations reveal previously undetected insecticide resistance mechanisms. PMID:30538253
BioGraph: a web application and a graph database for querying and analyzing bioinformatics resources. PMID:30458802
CHRAC/ACF contribute to the repressive ground state of chromatin. PMID:30456345
Overexpression of CBS and CSE genes affects lifespan, stress resistance and locomotor activity in Drosophila melanogaster. PMID:30408770
An in vivo screen for neuronal genes involved in obesity identifies Diacylglycerol kinase as a regulator of insulin secretion. PMID:30389349
Non-canonical Drosophila X chromosome dosage compensation and repressive topologically associated domains. PMID:30355339
REDfly: the transcriptional regulatory element database for Drosophila. PMID:30329093
Rhinoceros beetle horn development reveals deep parallels with dung beetles. PMID:30286074
Effects of N-acetyl-L-cysteine on lifespan, locomotor activity and stress-resistance of 3 Drosophila species with different lifespans. PMID:30243020
AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture. PMID:30239679
The CCR4-NOT complex is a tumor suppressor in Drosophila melanogaster eye cancer models. PMID:30144809
A plant diterpene counteracts juvenile hormone-mediated gene regulation during Drosophila melanogaster larval development. PMID:30011330
Gene Regulatory Variation in Drosophila melanogaster Renal Tissue. PMID:29976765
Time-resolved transcriptomics in neural stem cells identifies a v-ATPase/Notch regulatory loop. PMID:29959232
The transcription factor Grainy head primes epithelial enhancers for spatiotemporal activation by displacing nucleosomes. PMID:29867222
The Histone Demethylase KDM5 Is Essential for Larval Growth in Drosophila. PMID:29764901
Using WormBase: A Genome Biology Resource for Caenorhabditis elegans and Related Nematodes. PMID:29761466
The integrated stress response regulates BMP signalling through effects on translation. PMID:29609607
Argonaute2 and LaminB modulate gene expression by controlling chromatin topology. PMID:29529026
Atf3 links loss of epithelial polarity to defects in cell differentiation and cytoarchitecture. PMID:29494583
Co-complex protein membership evaluation using Maximum Entropy on GO ontology and InterPro annotation. PMID:29390084
A novel approach for human whole transcriptome analysis based on absolute gene expression of microarray data. PMID:29230367
Interplay between trauma and Pseudomonas entomophila infection in flies: a central role of the JNK pathway and of CrebA. PMID:29176735
A proteomics approach to identify targets of the ubiquitin-like molecule Urm1 in Drosophila melanogaster. PMID:28953965
A Drosophila model for toxicogenomics: Genetic variation in susceptibility to heavy metal exposure. PMID:28732062
Nuclear receptors connect progenitor transcription factors to cell cycle control. PMID:28687780
Muscle Directs Diurnal Energy Homeostasis through a Myokine-Dependent Hormone Module in Drosophila. PMID:28669758
FlyExpress 7: An Integrated Discovery Platform To Study Coexpressed Genes Using in Situ Hybridization Images in Drosophila. PMID:28667017
CHOmine: an integrated data warehouse for CHO systems biology and modeling. PMID:28605771
Cell fixation and preservation for droplet-based single-cell transcriptomics. PMID:28526029
Drosophila melanogaster positive transcriptional elongation factors regulate metabolic and sex-biased expression in adults. PMID:28521739
Mechanisms of Groucho-mediated repression revealed by genome-wide analysis of Groucho binding and activity. PMID:28245789
RNA-seq analysis of Drosophila clock and non-clock neurons reveals neuron-specific cycling and novel candidate neuropeptides. PMID:28182648
Transcriptional responses to hyperplastic MRL signalling in Drosophila. PMID:28148822
Effects of temperature on transcriptome and cuticular hydrocarbon expression in ecologically differentiated populations of desert Drosophila. PMID:28116058
A somatic piRNA pathway in the Drosophila fat body ensures metabolic homeostasis and normal lifespan. PMID:28000665
Identification of evolutionarily conserved DNA damage response genes that alter sensitivity to cisplatin. PMID:27863405
Reproductive activity triggers accelerated male mortality and decreases lifespan: genetic and gene expression determinants in Drosophila. PMID:27731328
Gene expression clines reveal local adaptation and associated trade-offs at a continental scale. PMID:27599812
Neural stem cell-encoded temporal patterning delineates an early window of malignant susceptibility in Drosophila. PMID:27296804
Neurons That Underlie Drosophila melanogaster Reproductive Behaviors: Detection of a Large Male-Bias in Gene Expression in fruitless-Expressing Neurons. PMID:27247289
Evidence for the fixation of gene duplications by positive selection in Drosophila. PMID:27197209
Cell-Type-Specific Transcriptome Analysis in the Drosophila Mushroom Body Reveals Memory-Related Changes in Gene Expression. PMID:27160913
Genomic signatures of domestication on neurogenetic genes in Drosophila melanogaster. PMID:26728183
Mouse genome database 2016. PMID:26578600
Hymenoptera Genome Database: integrating genome annotations in HymenopteraMine. PMID:26578564
Genetics on the Fly: A Primer on the Drosophila Model System. PMID:26564900
The Central Region of the Drosophila Co-repressor Groucho as a Regulatory Hub. PMID:26483546
Bovine Genome Database: new tools for gleaning function from the Bos taurus genome. PMID:26481361
Reconstruction of composite regulator-target splicing networks from high-throughput transcriptome data. PMID:26449793
Putative synaptic genes defined from a Drosophila whole body developmental transcriptome by a machine learning approach. PMID:26370122
toxoMine: an integrated omics data warehouse for Toxoplasma gondii systems biology research. PMID:26130662
Cross-organism analysis using InterMine. PMID:26097192
ZFIN, The zebrafish model organism database: Updates and new directions. PMID:26097180
MouseMine: a new data warehouse for MGI. PMID:26092688
Common binding by redundant group B Sox proteins is evolutionarily conserved in Drosophila. PMID:25887553
Mitochondrial dysfunction reveals the role of mRNA poly(A) tail regulation in oculopharyngeal muscular dystrophy pathogenesis. PMID:25816335
Expression of multiple horizontally acquired genes is a hallmark of both vertebrate and invertebrate genomes. PMID:25785303
Genome-wide features of neuroendocrine regulation in Drosophila by the basic helix-loop-helix transcription factor DIMMED. PMID:25634895
Araport: the Arabidopsis information portal. PMID:25414324
SuperFly: a comparative database for quantified spatio-temporal gene expression patterns in early dipteran embryos. PMID:25404137
Analysis of the expression patterns, subcellular localisations and interaction partners of Drosophila proteins using a pigP protein trap library. PMID:25294943
Dynamic epigenetic control of highly conserved noncoding elements. PMID:25289637
Population- and sex-biased gene expression in the excretion organs of Drosophila melanogaster. PMID:25246242
esyN: network building, sharing and publishing. PMID:25181461
Discovering non-coding RNA elements in Drosophila 3' untranslated regions. PMID:24989864
Transcriptome analysis reveals signature of adaptation to landscape fragmentation. PMID:24988207
Dietary switch reveals fast coordinated gene expression changes in Drosophila melanogaster. PMID:24864304
InterMine: extensive web services for modern biology. PMID:24753429
Drosophila microbiota modulates host metabolic gene expression via IMD/NF-κB signaling. PMID:24733183
Resources for functional genomics studies in Drosophila melanogaster. PMID:24653003
A functional screen reveals an extensive layer of transcriptional and splicing control underlying RAS/MAPK signaling in Drosophila. PMID:24643257
Genome wide identification of fruitless targets suggests a role in upregulating genes important for neural circuit formation. PMID:24642956
High intake of dietary sugar enhances bisphenol A (BPA) disruption and reveals ribosome-mediated pathways of toxicity. PMID:24614930
RNAi screening in Drosophila cells and in vivo. PMID:24576618
Gene duplication, lineage-specific expansion, and subfunctionalization in the MADF-BESS family patterns the Drosophila wing hinge. PMID:24336749
Identification of novel modifiers of Aβ toxicity by transcriptomic analysis in the fruitfly. PMID:24336499
The role of Dichaete in transcriptional regulation during Drosophila embryonic development. PMID:24314314
Male-specific Fruitless isoforms have different regulatory roles conferred by distinct zinc finger DNA binding domains. PMID:24074028
The conditional nature of genetic interactions: the consequences of wild-type backgrounds on mutational interactions in a genome-wide modifier screen. PMID:23935530
metabolicMine: an integrated genomics, genetics and proteomics data warehouse for common metabolic disease research. PMID:23935057
Analysis of disease-associated objects at the Rat Genome Database. PMID:23794737
Combining genome-wide methods to investigate the genetic complexity of courtship song variation in Drosophila melanogaster. PMID:23777628
InterMOD: integrated data and tools for the unification of model organism research. PMID:23652793
Genetic determinants of phosphate response in Drosophila. PMID:23520455
The 3rd DBCLS BioHackathon: improving life science data integration with Semantic Web technologies. PMID:23398680
Genome-wide screens for in vivo Tinman binding sites identify cardiac enhancers with diverse functional architectures. PMID:23326246
Identifying targets of the Sox domain protein Dichaete in the Drosophila CNS via targeted expression of dominant negative proteins. PMID:23289785
NeuroDNet - an open source platform for constructing and analyzing neurodegenerative disease networks. PMID:23286825
Chromosome substitution modulates resistance to ischemia reperfusion injury in Brown Norway rats. PMID:23235564
CBS: an open platform that integrates predictive methods and epigenetics information to characterize conserved regulatory features in multiple Drosophila genomes. PMID:23228284
Gene expression changes in response to aging compared to heat stress, oxidative stress and ionizing radiation in Drosophila melanogaster. PMID:23211361
FlyAtlas: database of gene expression in the tissues of Drosophila melanogaster. PMID:23203866
GenomeRNAi: a database for cell-based and in vivo RNAi phenotypes, 2013 update. PMID:23193271
Identification of maternally-loaded RNA transcripts in unfertilized eggs of Tribolium castaneum. PMID:23181844
Identification of gene expression changes associated with long-term memory of courtship rejection in Drosophila males. PMID:23173095
Genomic basis of aging and life-history evolution in Drosophila melanogaster. PMID:23106705
Zinc finger binding motifs do not explain recombination rate variation within or between species of Drosophila. PMID:23028758
InterMine: a flexible data warehouse system for the integration and analysis of heterogeneous biological data. PMID:23023984
Cell type-specific genomics of Drosophila neurons. PMID:22855560
Activating transcription factor 3 regulates immune and metabolic homeostasis. PMID:22851689
Gene Expression Commons: an open platform for absolute gene expression profiling. PMID:22815738
A versatile method for cell-specific profiling of translated mRNAs in Drosophila. PMID:22792260
Joint stage recognition and anatomical annotation of Drosophila gene expression patterns. PMID:22689756
Age-specific variation in immune response in Drosophila melanogaster has a genetic basis. PMID:22554890
YeastMine--an integrated data warehouse for Saccharomyces cerevisiae data as a multipurpose tool-kit. PMID:22434830
Conserved properties of Drosophila and human spermatozoal mRNA repertoires. PMID:22378807
Transcriptome profiling of sexual maturation and mating in the Mediterranean fruit fly, Ceratitis capitata. PMID:22303464
Tramtrack is genetically upstream of genes controlling tracheal tube size in Drosophila. PMID:22216153
Mechanisms of intron gain and loss in Drosophila. PMID:22182367
MitoMiner: a data warehouse for mitochondrial proteomics data. PMID:22121219
Saccharomyces Genome Database: the genomics resource of budding yeast. PMID:22110037
modMine: flexible access to modENCODE data. PMID:22080565
Drosophila duplication hotspots are associated with late-replicating regions of the genome. PMID:22072977
FlyRNAi.org--the database of the Drosophila RNAi screening center: 2012 update. PMID:22067456
pubmed2ensembl: a resource for mining the biological literature on genes. PMID:21980353
Using the Saccharomyces Genome Database (SGD) for analysis of genomic information. PMID:21901739
Somatic sex-specific transcriptome differences in Drosophila revealed by whole transcriptome sequencing. PMID:21756339
The Strategies WDK: a graphical search interface and web development kit for functional genomics databases. PMID:21705364
Genome-wide dFOXO targets and topology of the transcriptomic response to stress and insulin signalling. PMID:21694719
A comprehensive gene expression atlas of sex- and tissue-specificity in the malaria vector, Anopheles gambiae. PMID:21649883
An analysis of single amino acid repeats as use case for application specific background models. PMID:21595908
Integrating diverse databases into an unified analysis framework: a Galaxy approach. PMID:21531983
In vivo analysis of proteomes and interactomes using Parallel Affinity Capture (iPAC) coupled to mass spectrometry. PMID:21447707
TargetMine, an integrated data warehouse for candidate gene prioritisation and target discovery. PMID:21408081
LabKey Server: an open source platform for scientific data integration, analysis and collaboration. PMID:21385461
RGD: a comparative genomics platform. PMID:21296746
The MOLGENIS toolkit: rapid prototyping of biosoftware at the push of a button. PMID:21210979
Neighbourhood continuity is not required for correct testis gene expression in Drosophila. PMID:21151342
FlyFactorSurvey: a database of Drosophila transcription factor binding specificities determined using the bacterial one-hybrid system. PMID:21097781
Analyses of nuclearly encoded mitochondrial genes suggest gene duplication as a mechanism for resolving intralocus sexually antagonistic conflict in Drosophila. PMID:21037198
A doublecortin containing microtubule-associated protein is implicated in mechanotransduction in Drosophila sensory cilia. PMID:20975667
The GMOD Drupal bioinformatic server framework. PMID:20971988
Dynamic, mating-induced gene expression changes in female head and brain tissues of Drosophila melanogaster. PMID:20925960
Dynamic isomiR regulation in Drosophila development. PMID:20805289
Genomic repertoires of DNA-binding transcription factors across the tree of life. PMID:20675356
BSQA: integrated text mining using entity relation semantics extracted from biological literature of insects. PMID:20576702
Germline-dependent gene expression in distant non-gonadal somatic tissues of Drosophila. PMID:20515475
The developmental expression dynamics of Drosophila melanogaster transcription factors. PMID:20384991
Evolution of the Sequence Ontology terms and relationships. PMID:20226267
XGAP: a uniform and extensible data model and software platform for genotype and phenotype experiments. PMID:20214801
Laser microdissection of sensory organ precursor cells of Drosophila microchaetes. PMID:20174573
In vivo RNAi rescue in Drosophila melanogaster with genomic transgenes from Drosophila pseudoobscura. PMID:20126626
FlyTED: the Drosophila Testis Gene Expression Database. PMID:19934263
FlyTF: improved annotation and enhanced functionality of the Drosophila transcription factor database. PMID:19884132
HPD: an online integrated human pathway database enabling systems biology studies. PMID:19811689
Gene networks in Drosophila melanogaster: integrating experimental data to predict gene function. PMID:19758432
Flynet: a genomic resource for Drosophila melanogaster transcriptional regulatory networks. PMID:19656951
A transcriptional network associated with natural variation in Drosophila aggressive behavior. PMID:19607677
Biases in Drosophila melanogaster protein trap screens. PMID:19476619
A network-based integrative approach to prioritize reliable hits from multiple genome-wide RNAi screens in Drosophila. PMID:19435510
Quantitative trait loci for aggressive behavior in Drosophila melanogaster. PMID:19414563
FlyPhy: a phylogenomic analysis platform for Drosophila genes and gene families. PMID:19393099
Somatic, germline and sex hierarchy regulated gene expression during Drosophila metamorphosis. PMID:19216785
MitoMiner, an integrated database for the storage and analysis of mitochondrial proteomics data. PMID:19208617
COPI complex is a regulator of lipid homeostasis. PMID:19067489
GMODWeb: a web framework for the Generic Model Organism Database. PMID:18570664
REDfly 2.0: an integrated database of cis-regulatory modules and transcription factor binding sites in Drosophila. PMID:18039705
Demasculinization of X chromosomes in the Drosophila genus. PMID:17994090 - http://dx.doi.org/10.1186/gb-2007-8-7-r129
- http://dx.doi.org/10.1093/bioinformatics/bts577
Tags:
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More detailed information about this field from each metasource.
gene
metasource: Fairsharing.org
version: FAIRsharing.org: FlyMine; FlyMine; DOI: https://doi.org/10.25504/FAIRsharing.rhpjhv; Last edited: March 10, 2021, 2:45 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
gene expression
metasource: Fairsharing.org
version: FAIRsharing.org: FlyMine; FlyMine; DOI: https://doi.org/10.25504/FAIRsharing.rhpjhv; Last edited: March 10, 2021, 2:45 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
gene expression data
metasource: Fairsharing.org
version: FAIRsharing.org: FlyMine; FlyMine; DOI: https://doi.org/10.25504/FAIRsharing.rhpjhv; Last edited: March 10, 2021, 2:45 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
genome
metasource: Fairsharing.org
version: FAIRsharing.org: FlyMine; FlyMine; DOI: https://doi.org/10.25504/FAIRsharing.rhpjhv; Last edited: March 10, 2021, 2:45 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
protein
metasource: Fairsharing.org
version: FAIRsharing.org: FlyMine; FlyMine; DOI: https://doi.org/10.25504/FAIRsharing.rhpjhv; Last edited: March 10, 2021, 2:45 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
protein interaction
metasource: Fairsharing.org
version: FAIRsharing.org: FlyMine; FlyMine; DOI: https://doi.org/10.25504/FAIRsharing.rhpjhv; Last edited: March 10, 2021, 2:45 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
genomics databases (non-vertebrate)
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
invertebrate genome databases
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
data management
metasource: bio.tools
version: extracted_at: 2022-11-04T11:26:57.432616
genomics
metasource: bio.tools
version: extracted_at: 2022-11-04T11:26:57.432616
proteomics
metasource: bio.tools
version: extracted_at: 2022-11-04T11:26:57.432616
Tags
More detailed information about this field from each metasource.
gene
metasource: Fairsharing.orgversion: FAIRsharing.org: FlyMine; FlyMine; DOI: https://doi.org/10.25504/FAIRsharing.rhpjhv; Last edited: March 10, 2021, 2:45 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
gene expression
metasource: Fairsharing.orgversion: FAIRsharing.org: FlyMine; FlyMine; DOI: https://doi.org/10.25504/FAIRsharing.rhpjhv; Last edited: March 10, 2021, 2:45 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
gene expression data
metasource: Fairsharing.orgversion: FAIRsharing.org: FlyMine; FlyMine; DOI: https://doi.org/10.25504/FAIRsharing.rhpjhv; Last edited: March 10, 2021, 2:45 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
genome
metasource: Fairsharing.orgversion: FAIRsharing.org: FlyMine; FlyMine; DOI: https://doi.org/10.25504/FAIRsharing.rhpjhv; Last edited: March 10, 2021, 2:45 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
protein
metasource: Fairsharing.orgversion: FAIRsharing.org: FlyMine; FlyMine; DOI: https://doi.org/10.25504/FAIRsharing.rhpjhv; Last edited: March 10, 2021, 2:45 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
protein interaction
metasource: Fairsharing.orgversion: FAIRsharing.org: FlyMine; FlyMine; DOI: https://doi.org/10.25504/FAIRsharing.rhpjhv; Last edited: March 10, 2021, 2:45 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
genomics databases (non-vertebrate)
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
invertebrate genome databases
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
data management
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:26:57.432616
genomics
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:26:57.432616
proteomics
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:26:57.432616
gene gene expression gene expression genome protein protein interaction genomics invertebrate genome data management genomics proteomics
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