CellML

CellML language is an open standard based on the XML markup language. CellML is being developed by the Auckland Bioengineering Institute at the University of Auckland and affiliated research groups. The purpose of CellML is to store and exchange computer-based mathematical models. CellML allows scientists to share models even if they are using different model-building software. It also enables them to reuse components from one model in another, thus accelerating model building.

Webpage:

http://www.cellml.org

Publications: (9)

Publications
More detailed information about this field from each metasource.

CellML: its future, present and past
PMID: 15142756
metasource: Fairsharing.org
version: FAIRsharing.org: CellML; CellML; DOI: https://doi.org/10.25504/FAIRsharing.50n9hc; Last edited: June 22, 2021, 2:23 p.m.; Last accessed: Jan 03 2022 7:11 p.m.

Myokit: A simple interface to cardiac cellular electrophysiology
PMID: 26721671
metasource: Fairsharing.org
version: FAIRsharing.org: CellML; CellML; DOI: https://doi.org/10.25504/FAIRsharing.50n9hc; Last edited: June 22, 2021, 2:23 p.m.; Last accessed: Jan 03 2022 7:11 p.m.

OpenCOR: a modular and interoperable approach to computational biology
PMID: 25705192
metasource: Fairsharing.org
version: FAIRsharing.org: CellML; CellML; DOI: https://doi.org/10.25504/FAIRsharing.50n9hc; Last edited: June 22, 2021, 2:23 p.m.; Last accessed: Jan 03 2022 7:11 p.m.

The Cardiac Electrophysiology Web Lab
PMID: 26789753
metasource: Fairsharing.org
version: FAIRsharing.org: CellML; CellML; DOI: https://doi.org/10.25504/FAIRsharing.50n9hc; Last edited: June 22, 2021, 2:23 p.m.; Last accessed: Jan 03 2022 7:11 p.m.

Using CellML with OpenCMISS to Simulate Multi-Scale Physiology
PMID: 25601911
metasource: Fairsharing.org
version: FAIRsharing.org: CellML; CellML; DOI: https://doi.org/10.25504/FAIRsharing.50n9hc; Last edited: June 22, 2021, 2:23 p.m.; Last accessed: Jan 03 2022 7:11 p.m.

Semantics-Based Composition of Integrated Cardiomyocyte Models Motivated by Real-World Use Cases
PMID: 26716837
metasource: Fairsharing.org
version: FAIRsharing.org: CellML; CellML; DOI: https://doi.org/10.25504/FAIRsharing.50n9hc; Last edited: June 22, 2021, 2:23 p.m.; Last accessed: Jan 03 2022 7:11 p.m.

Cellular cardiac electrophysiology modeling with Chaste and CellML
PMID: 25610400
metasource: Fairsharing.org
version: FAIRsharing.org: CellML; CellML; DOI: https://doi.org/10.25504/FAIRsharing.50n9hc; Last edited: June 22, 2021, 2:23 p.m.; Last accessed: Jan 03 2022 7:11 p.m.

The CellML 1.1 Specification
PMID: 26528557
metasource: Fairsharing.org
version: FAIRsharing.org: CellML; CellML; DOI: https://doi.org/10.25504/FAIRsharing.50n9hc; Last edited: June 22, 2021, 2:23 p.m.; Last accessed: Jan 03 2022 7:11 p.m.

The CellML Metadata Framework 2.0 Specification
PMID: 26528558
metasource: Fairsharing.org
version: FAIRsharing.org: CellML; CellML; DOI: https://doi.org/10.25504/FAIRsharing.50n9hc; Last edited: June 22, 2021, 2:23 p.m.; Last accessed: Jan 03 2022 7:11 p.m.

CellML: its future, present and past PubMed citations: 141.

141 articles citing: CellML: its future, present and past

Challenges and Limitations of Biological Network Analysis. PMID:35892929
Investigating the spatial resolution of EMG and MMG based on a systemic multi-scale model. PMID:35441905
Exploring the evolution of biochemical models at the network level. PMID:35312734
Modular assembly of dynamic models in systems biology. PMID:34644304
Biomolecule and Bioentity Interaction Databases in Systems Biology: A Comprehensive Review. PMID:34439912
Relating simulation studies by provenance-Developing a family of Wnt signaling models. PMID:34351901
An overview of graph databases and their applications in the biomedical domain. PMID:34003247
Alternative strategies in cardiac preclinical research and new clinical trial formats. PMID:33693475
A consensus-based and readable extension of Linear Code for Reaction Rules (LiCoRR). PMID:33178355
SBML Level 3: an extensible format for the exchange and reuse of biological models. PMID:32845085
Towards standardization guidelines for in silico approaches in personalized medicine. PMID:32827396
A Guide to Conquer the Biological Network Era Using Graph Theory. PMID:32083072
BioModels-15 years of sharing computational models in life science. PMID:31701150
Data Management in Computational Systems Biology: Exploring Standards, Tools, Databases, and Packaging Best Practices. PMID:31602618
A case for the reuse and adaptation of mechanistic computational models to study transplant immunology. PMID:31562790
The Design of FluxML: A Universal Modeling Language for 13C Metabolic Flux Analysis. PMID:31178829
The 2019 mathematical oncology roadmap. PMID:30991381
Multiscale computing for science and engineering in the era of exascale performance. PMID:30967040
Scalable nonlinear programming framework for parameter estimation in dynamic biological system models. PMID:30908479
Integrative and theoretical research on the architecture of a biological system and its disorder. PMID:30868372
"Reproducible" Research in Mathematical Sciences Requires Changes in our Peer Review Culture and Modernization of our Current Publication Approach. PMID:30232583
Reproducible Research Using Biomodels. PMID:30191472
Enabling Detailed, Biophysics-Based Skeletal Muscle Models on HPC Systems. PMID:30050446
Reproducible model development in the cardiac electrophysiology Web Lab. PMID:29842853
Challenges in Reproducibility, Replicability, and Comparability of Computational Models and Tools for Neuronal and Glial Networks, Cells, and Subcellular Structures. PMID:29765315
Progress in Mathematical Modeling of Gastrointestinal Slow Wave Abnormalities. PMID:29379448
Formalizing Knowledge in Multi-Scale Agent-Based Simulations. PMID:29338063
BioModels: expanding horizons to include more modelling approaches and formats. PMID:29106614
Recent Advances in the Systems Biology of Aging. PMID:29020802
HD Physiology Project-Japanese efforts to promote multilevel integrative systems biology and physiome research. PMID:28649429
Reproducibility and Comparability of Computational Models for Astrocyte Calcium Excitability. PMID:28270761
LongQt: A cardiac electrophysiology simulation platform. PMID:27942465
phraSED-ML: A paraphrased, human-readable adaptation of SED-ML. PMID:27774871
A Six-Stage Workflow for Robust Application of Systems Pharmacology. PMID:27299936
Mathematics in modern immunology. PMID:27051512
Participatory medicine: model based tools for engaging and empowering the individual. PMID:27051511
Reproducibility in Computational Neuroscience Models and Simulations. PMID:27046845
Models and Simulations as a Service: Exploring the Use of Galaxy for Delivering Computational Models. PMID:26958881
The Cardiac Electrophysiology Web Lab. PMID:26789753
Databases for multilevel biophysiology research available at Physiome.jp. PMID:26441671
Visualizing genome and systems biology: technologies, tools, implementation techniques and trends, past, present and future. PMID:26309733
Reasoning over genetic variance information in cause-and-effect models of neurodegenerative diseases. PMID:26249223
BioModels: Content, Features, Functionality, and Use. PMID:26225232
Ca-mediated electroformation of cell-sized lipid vesicles. PMID:25950604
Visualisation of BioPAX Networks using BioLayout Express (3D). PMID:25949802
Mimoza: web-based semantic zooming and navigation in metabolic networks. PMID:25889977
Combining computational models, semantic annotations and simulation experiments in a graph database. PMID:25754863
Local perturbation analysis: a computational tool for biophysical reaction-diffusion models. PMID:25606671
Improving collaboration by standardization efforts in systems biology. PMID:25538939
Semantically linking in silico cancer models. PMID:25520553
BioModels: ten-year anniversary. PMID:25414348
Energy-based analysis of biochemical cycles using bond graphs. PMID:25383030
Mechanistic modeling confronts the complexity of molecular cell biology. PMID:25368428
LEMS: a language for expressing complex biological models in concise and hierarchical form and its use in underpinning NeuroML 2. PMID:25309419
BioModels linked dataset. PMID:25182954
Images as drivers of progress in cardiac computational modelling. PMID:25117497
KiMoSys: a web-based repository of experimental data for KInetic MOdels of biological SYStems. PMID:25115331
A dedicated database system for handling multi-level data in systems biology. PMID:25053973
The Synthetic Biology Open Language (SBOL) provides a community standard for communicating designs in synthetic biology. PMID:24911500
Flexible composition and execution of high performance, high fidelity multiscale biomedical simulations. PMID:24427530
Multi-scale computational models of the airways to unravel the pathophysiological mechanisms in asthma and chronic obstructive pulmonary disease (AirPROM). PMID:24427517
Modeling the chemoelectromechanical behavior of skeletal muscle using the parallel open-source software library OpenCMISS. PMID:24348739
SBML and CellML translation in antimony and JSim. PMID:24215024
The systems biology simulation core algorithm. PMID:23826941
Dealing with diversity in computational cancer modeling. PMID:23700360
A single compartment model of pacemaking in dissasociated substantia nigra neurons: stability and energy analysis. PMID:23686304
MIMO: an efficient tool for molecular interaction maps overlap. PMID:23672344
Hierarchical approaches for systems modeling in cardiac development. PMID:23463736
Accelerating cancer systems biology research through Semantic Web technology. PMID:23188758
Mechanistic modelling of cancer: some reflections from software engineering and philosophy of science. PMID:23149931
Towards personalized clinical in-silico modeling of atrial anatomy and electrophysiology. PMID:23070728
Data management strategies for multinational large-scale systems biology projects. PMID:23047157
An overview of computational life science databases & exchange formats of relevance to chemical biology research. PMID:22934944
Multi-way metamodelling facilitates insight into the complex input-output maps of nonlinear dynamic models. PMID:22818032
Multiscale modeling and data integration in the virtual physiological rat project. PMID:22805979
Declarative representation of uncertainty in mathematical models. PMID:22802941
Systems immunology: a survey of modeling formalisms, applications and simulation tools. PMID:22528121
Parameters in dynamic models of complex traits are containers of missing heritability. PMID:22496634
Genotype-Phenotype Map Characteristics of an In silico Heart Cell. PMID:22232604
Meeting report from the first meetings of the Computational Modeling in Biology Network (COMBINE). PMID:22180826
Modeling formalisms in Systems Biology. PMID:22141422
PathCase-SB architecture and database design. PMID:22070889
Controlled vocabularies and semantics in systems biology. PMID:22027554
Bioinformatics and systems biology of the lipidome. PMID:21939287
A stochastic multi-scale model of electrical function in normal and depleted ICC networks. PMID:21843981
Dependence of spontaneous neuronal firing and depolarisation block on astroglial membrane transport mechanisms. PMID:21667153
Hierarchical cluster-based partial least squares regression (HC-PLSR) is an efficient tool for metamodelling of nonlinear dynamic models. PMID:21627852
Eugene--a domain specific language for specifying and constraining synthetic biological parts, devices, and systems. PMID:21559524
Using graph theory to analyze biological networks. PMID:21527005
Current trends and new challenges of databases and web applications for systems driven biological research. PMID:21423387
Knowledge management for systems biology a general and visually driven framework applied to translational medicine. PMID:21375767
Multiscale modeling of gastrointestinal electrophysiology and experimental validation. PMID:21133835
The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored. PMID:21045058
Kinetic Modeling using BioPAX ontology. PMID:20862270
In silico models of cancer. PMID:20836040
Computational modeling of mammalian signaling networks. PMID:20836022
The BioPAX community standard for pathway data sharing. PMID:20829833
Using views of Systems Biology Cloud: application for model building. PMID:20730508
BioModels Database: An enhanced, curated and annotated resource for published quantitative kinetic models. PMID:20587024
NeuroML: a language for describing data driven models of neurons and networks with a high degree of biological detail. PMID:20585541
Arrhythmic risk biomarkers for the assessment of drug cardiotoxicity: from experiments to computer simulations. PMID:20478918
Construction of a large scale integrated map of macrophage pathogen recognition and effector systems. PMID:20470404
Visualization of omics data for systems biology. PMID:20195258
Systems biology of embryogenesis. PMID:20003850
BioModels.net Web Services, a free and integrated toolkit for computational modelling software. PMID:19939940
Computational systems biology in cancer: modeling methods and applications. PMID:19936081
The challenges of informatics in synthetic biology: from biomolecular networks to artificial organisms. PMID:19906839
Model aggregation: a building-block approach to creating large macromolecular regulatory networks. PMID:19880372
TinkerCell: modular CAD tool for synthetic biology. PMID:19874625
Computational reasoning across multiple models. PMID:19717801
Antimony: a modular model definition language. PMID:19578039
Biophysically based mathematical modeling of interstitial cells of Cajal slow wave activity generated from a discrete unitary potential basis. PMID:19527643
CellML metadata standards, associated tools and repositories. PMID:19380315
Designing and encoding models for synthetic biology. PMID:19364720
Systems medicine: the future of medical genomics and healthcare. PMID:19348689
Astrocytic mechanisms explaining neural-activity-induced shrinkage of extraneuronal space. PMID:19165313
Virtual Cell modelling and simulation software environment. PMID:19045830
Network integration and graph analysis in mammalian molecular systems biology. PMID:19045817
A survey of visualization tools for biological network analysis. PMID:19040716
Asmparts: assembly of biological model parts. PMID:19003441
Simulating in vitro transcriptional response of zinc homeostasis system in Escherichia coli. PMID:18950480
Standards and ontologies in computational systems biology. PMID:18793134
A model browser for biosimulation. PMID:18693954
Programming with models: modularity and abstraction provide powerful capabilities for systems biology. PMID:18647734
PROTO-PLASM: parallel language for adaptive and scalable modelling of biosystems. PMID:18559320
Why are computational neuroscience and systems biology so separate? PMID:18516226
MIRIAM Resources: tools to generate and resolve robust cross-references in Systems Biology. PMID:18078503
Cytoview: development of a cell modelling framework. PMID:17914238
Multi-scale computational modelling in biology and physiology. PMID:17888502
Modeling hypertrophic IP3 transients in the cardiac myocyte. PMID:17693463
neuroConstruct: a tool for modeling networks of neurons in 3D space. PMID:17442244
Formal TCA cycle description based on elementary actions. PMID:17426387
CYCLONET--an integrated database on cell cycle regulation and carcinogenesis. PMID:17202170
Parameter estimate of signal transduction pathways. PMID:17118160
Model storage, exchange and integration. PMID:17118155
Computer modelling of the sinoatrial node. PMID:17115219
cPath: open source software for collecting, storing, and querying biological pathways. PMID:17101041
Dry work in a wet world: computation in systems biology. PMID:16820781
Standardizing the standards. PMID:16738556
BioModels Database: a free, centralized database of curated, published, quantitative kinetic models of biochemical and cellular systems. PMID:16381960
Pathguide: a pathway resource list. PMID:16381921
Myokit: A simple interface to cardiac cellular electrophysiology PubMed citations: 36.

36 articles citing: Myokit: A simple interface to cardiac cellular electrophysiology

Disruption of a Conservative Motif in the C-Terminal Loop of the KCNQ1 Channel Causes LQT Syndrome. PMID:35887302
Real-Time Interactive Simulations of Complex Ionic Cardiac Cell Models in 2D and 3D Heart Structures with GPUs on Personal Computers. PMID:35754517
A Parameter Representing Missing Charge Should Be Considered when Calibrating Action Potential Models. PMID:35557969
Integrative Computational Modeling of Cardiomyocyte Calcium Handling and Cardiac Arrhythmias: Current Status and Future Challenges. PMID:35406654
cellmlmanip and chaste_codegen: automatic CellML to C++ code generation with fixes for singularities and automatically generated Jacobians. PMID:35299708
Sex Differences in Drug-Induced Arrhythmogenesis. PMID:34489728
Electrophysiological characterization of the hERG R56Q LQTS variant and targeted rescue by the activator RPR260243. PMID:34398210
Immediate and Delayed Response of Simulated Human Atrial Myocytes to Clinically-Relevant Hypokalemia. PMID:34122128
Characteristics of mathematical modeling languages that facilitate model reuse in systems biology: a software engineering perspective. PMID:34083542
Cellular Mechanisms of the Anti-Arrhythmic Effect of Cardiac PDE2 Overexpression. PMID:34062838
Novel insights into the electrophysiology of murine cardiac macrophages: relevance of voltage-gated potassium channels. PMID:33823533
Beta-Adrenergic Receptor Stimulation Modulates the Cellular Proarrhythmic Effects of Chloroquine and Azithromycin. PMID:33192602
Self-restoration of cardiac excitation rhythm by anti-arrhythmic ion channel gating. PMID:32510321
Considering discrepancy when calibrating a mechanistic electrophysiology model. PMID:32448065
Reducing complexity and unidentifiability when modelling human atrial cells. PMID:32448063
Accounting for variability in ion current recordings using a mathematical model of artefacts in voltage-clamp experiments. PMID:32448060
Calibration of ionic and cellular cardiac electrophysiology models. PMID:32084308
Temporal irregularity quantification and mapping of optical action potentials using wave morphology similarity. PMID:31899215
Development, calibration, and validation of a novel human ventricular myocyte model in health, disease, and drug block. PMID:31868580
Four Ways to Fit an Ion Channel Model. PMID:31493859
Rapid Characterization of hERG Channel Kinetics II: Temperature Dependence. PMID:31451180
Rapid Characterization of hERG Channel Kinetics I: Using an Automated High-Throughput System. PMID:31447109
Rethinking multiscale cardiac electrophysiology with machine learning and predictive modelling. PMID:30442428
Myocyte Remodeling Due to Fibro-Fatty Infiltrations Influences Arrhythmogenicity. PMID:30344493
DENIS: Solving cardiac electrophysiological simulations with volunteer computing. PMID:30325959
Reproducible model development in the cardiac electrophysiology Web Lab. PMID:29842853
Tailoring Mathematical Models to Stem-Cell Derived Cardiomyocyte Lines Can Improve Predictions of Drug-Induced Changes to Their Electrophysiology. PMID:29311950
Muscarinic type-1 receptors contribute to IK,ACh in human atrial cardiomyocytes and are upregulated in patients with chronic atrial fibrillation. PMID:29290419
Spatial Patterns of Excitation at Tissue and Whole Organ Level Due to Early Afterdepolarizations. PMID:28690545
β-Adrenergic receptor stimulation inhibits proarrhythmic alternans in postinfarction border zone cardiomyocytes: a computational analysis. PMID:28550171
BeatBox-HPC simulation environment for biophysically and anatomically realistic cardiac electrophysiology. PMID:28467407
LongQt: A cardiac electrophysiology simulation platform. PMID:27942465
In Silico Evaluation of the Potential Antiarrhythmic Effect of Epigallocatechin-3-Gallate on Cardiac Channelopathies. PMID:27882075
Physiology-based regularization of the electrocardiographic inverse problem. PMID:27873155
Fhf2 gene deletion causes temperature-sensitive cardiac conduction failure. PMID:27701382
Variability in cardiac electrophysiology: Using experimentally-calibrated populations of models to move beyond the single virtual physiological human paradigm. PMID:26701222
OpenCOR: a modular and interoperable approach to computational biology PubMed citations: 29.

29 articles citing: OpenCOR: a modular and interoperable approach to computational biology

cellmlmanip and chaste_codegen: automatic CellML to C++ code generation with fixes for singularities and automatically generated Jacobians. PMID:35299708
NLIMED: Natural Language Interface for Model Entity Discovery in Biosimulation Model Repositories. PMID:35283794
Modular assembly of dynamic models in systems biology. PMID:34644304
Contribution of HCN1 variant to sinus bradycardia: A case report. PMID:34621433
Countering reproducibility issues in mathematical models with software engineering techniques: A case study using a one-dimensional mathematical model of the atrioventricular node. PMID:34280231
The SPARC DRC: Building a Resource for the Autonomic Nervous System Community. PMID:34248680
libOmexMeta: Enabling semantic annotation of models to support FAIR principles. PMID:34132740
Characteristics of mathematical modeling languages that facilitate model reuse in systems biology: a software engineering perspective. PMID:34083542
RunBioSimulations: an extensible web application that simulates a wide range of computational modeling frameworks, algorithms, and formats. PMID:34019658
Alternative strategies in cardiac preclinical research and new clinical trial formats. PMID:33693475
An Understandable, Extensible, and Reusable Implementation of the Hodgkin-Huxley Equations Using Modelica. PMID:33117198
Simulating Notch-Dome Morphology of Action Potential of Ventricular Cell: How the Speeds of Positive and Negative Feedbacks on Transmembrane Voltage Can Influence the Health of a Cell? PMID:32953882
Best Practices for Making Reproducible Biochemical Models. PMID:32853539
Insights From Computational Modeling Into the Contribution of Mechano-Calcium Feedback on the Cardiac End-Systolic Force-Length Relationship. PMID:32547426
Development, calibration, and validation of a novel human ventricular myocyte model in health, disease, and drug block. PMID:31868580
Required GK1 to Suppress Automaticity of iPSC-CMs Depends Strongly on IK1 Model Structure. PMID:31623886
Data Management in Computational Systems Biology: Exploring Standards, Tools, Databases, and Packaging Best Practices. PMID:31602618
Model annotation and discovery with the Physiome Model Repository. PMID:31492098
Computational Modeling of Glucose Uptake in the Enterocyte. PMID:31031632
A demonstration of modularity, reuse, reproducibility, portability and scalability for modeling and simulation of cardiac electrophysiology using Kepler Workflows. PMID:30849072
Harmonizing semantic annotations for computational models in biology. PMID:30462164
Reproducible model development in the cardiac electrophysiology Web Lab. PMID:29842853
Bond Graph Model of Cerebral Circulation: Toward Clinically Feasible Systemic Blood Flow Simulations. PMID:29551979
Next-generation, personalised, model-based critical care medicine: a state-of-the art review of in silico virtual patient models, methods, and cohorts, and how to validation them. PMID:29463246
Meeting the multiscale challenge: representing physiology processes over ApiNATOMY circuits using bond graphs. PMID:29285348
LongQt: A cardiac electrophysiology simulation platform. PMID:27942465
Modular modelling with Physiome standards. PMID:27353233
Models and Simulations as a Service: Exploring the Use of Galaxy for Delivering Computational Models. PMID:26958881
Semantics-Based Composition of Integrated Cardiomyocyte Models Motivated by Real-World Use Cases. PMID:26716837
The Cardiac Electrophysiology Web Lab PubMed citations: 21.

21 articles citing: The Cardiac Electrophysiology Web Lab

A Parameter Representing Missing Charge Should Be Considered when Calibrating Action Potential Models. PMID:35557969
Exploring the evolution of biochemical models at the network level. PMID:35312734
cellmlmanip and chaste_codegen: automatic CellML to C++ code generation with fixes for singularities and automatically generated Jacobians. PMID:35299708
NLIMED: Natural Language Interface for Model Entity Discovery in Biosimulation Model Repositories. PMID:35283794
A Quantitative Systems Pharmacology Perspective on the Importance of Parameter Identifiability. PMID:35132487
Electrophysiological characterization of the hERG R56Q LQTS variant and targeted rescue by the activator RPR260243. PMID:34398210
Calibration of ionic and cellular cardiac electrophysiology models. PMID:32084308
Required GK1 to Suppress Automaticity of iPSC-CMs Depends Strongly on IK1 Model Structure. PMID:31623886
Data Management in Computational Systems Biology: Exploring Standards, Tools, Databases, and Packaging Best Practices. PMID:31602618
Rapid Characterization of hERG Channel Kinetics II: Temperature Dependence. PMID:31451180
A demonstration of modularity, reuse, reproducibility, portability and scalability for modeling and simulation of cardiac electrophysiology using Kepler Workflows. PMID:30849072
Identifying frequent patterns in biochemical reaction networks: a workflow. PMID:29992320
Reproducible model development in the cardiac electrophysiology Web Lab. PMID:29842853
Sinusoidal voltage protocols for rapid characterisation of ion channel kinetics. PMID:29573276
Validation and Trustworthiness of Multiscale Models of Cardiac Electrophysiology. PMID:29497385
MAGPIE: Simplifying access and execution of computational models in the life sciences. PMID:29244826
Notions of similarity for systems biology models. PMID:27742665
Modular modelling with Physiome standards. PMID:27353233
Computational cardiology and risk stratification for sudden cardiac death: one of the grand challenges for cardiology in the 21st century. PMID:27060987
Uncertainty and variability in computational and mathematical models of cardiac physiology. PMID:26990229
Recent developments in using mechanistic cardiac modelling for drug safety evaluation. PMID:26891981
Using CellML with OpenCMISS to Simulate Multi-Scale Physiology PubMed citations: 12.

12 articles citing: Using CellML with OpenCMISS to Simulate Multi-Scale Physiology

Assessing Cardiomyocyte Excitation-Contraction Coupling Site Detection From Live Cell Imaging Using a Structurally-Realistic Computational Model of Calcium Release. PMID:31632297
Computational Modeling of Glucose Uptake in the Enterocyte. PMID:31031632
A demonstration of modularity, reuse, reproducibility, portability and scalability for modeling and simulation of cardiac electrophysiology using Kepler Workflows. PMID:30849072
Next-generation, personalised, model-based critical care medicine: a state-of-the art review of in silico virtual patient models, methods, and cohorts, and how to validation them. PMID:29463246
Meeting the multiscale challenge: representing physiology processes over ApiNATOMY circuits using bond graphs. PMID:29285348
Roadmap for cardiovascular circulation model. PMID:27506597
The Human Physiome: how standards, software and innovative service infrastructures are providing the building blocks to make it achievable. PMID:27051515
Requirements for the formal representation of pathophysiology mechanisms by clinicians. PMID:27051514
Multiscale musculoskeletal modelling, data-model fusion and electromyography-informed modelling. PMID:27051510
Methodological challenges and analytic opportunities for modeling and interpreting Big Healthcare Data. PMID:26918190
The virtual intestine: in silico modeling of small intestinal electrophysiology and motility and the applications. PMID:26562482
OpenCOR: a modular and interoperable approach to computational biology. PMID:25705192