mz5
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mz5 is a complete reimplementation of the mzML ontology that is based on the efficient, industrial strength storage backend HDF5.
Description
More detailed information about this field from each metasource.
mz5 is a complete reimplementation of the mzML ontology that is based on the efficient, industrial strength storage backend HDF5.
metasource: Fairsharing.orgversion: FAIRsharing.org: mz5; mz5; DOI: https://doi.org/10.25504/FAIRsharing.262bth; Last edited: Jan. 8, 2019, 1:32 p.m.; Last accessed: Jan 03 2022 7:10 p.m.
Webpage:
http://software.steenlab.org/mz5Webpage
More detailed information about this field from each metasource.
http://software.steenlab.org/mz5
metasource: Fairsharing.orgversion: FAIRsharing.org: mz5; mz5; DOI: https://doi.org/10.25504/FAIRsharing.262bth; Last edited: Jan. 8, 2019, 1:32 p.m.; Last accessed: Jan 03 2022 7:10 p.m.
Publications:
Publications
More detailed information about this field from each metasource.
mz5: space- and time-efficient storage of mass spectrometry data sets
PMID: 21960719
metasource: Fairsharing.org
version: FAIRsharing.org: mz5; mz5; DOI: https://doi.org/10.25504/FAIRsharing.262bth; Last edited: Jan. 8, 2019, 1:32 p.m.; Last accessed: Jan 03 2022 7:10 p.m.
Publications
More detailed information about this field from each metasource.
mz5: space- and time-efficient storage of mass spectrometry data sets
PMID: 21960719
metasource: Fairsharing.org
version: FAIRsharing.org: mz5; mz5; DOI: https://doi.org/10.25504/FAIRsharing.262bth; Last edited: Jan. 8, 2019, 1:32 p.m.; Last accessed: Jan 03 2022 7:10 p.m.
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mz5: space- and time-efficient storage of mass spectrometry data sets
PubMed citations: 27.
27 articles citing: mz5: space- and time-efficient storage of mass spectrometry data sets
StackZDPD: a novel encoding scheme for mass spectrometry data optimized for speed and compression ratio. PMID:35354909
Aird: a computation-oriented mass spectrometry data format enables a higher compression ratio and less decoding time. PMID:35021987
AlphaTims: Indexing Trapped Ion Mobility Spectrometry-TOF Data for Fast and Easy Accession and Visualization. PMID:34543758
Spatially Resolved Mass Spectrometry at the Single Cell: Recent Innovations in Proteomics and Metabolomics. PMID:33656885
Fast visual exploration of mass spectrometry images with interactive dynamic spectral similarity pseudocoloring. PMID:33633175
mzMLb: A Future-Proof Raw Mass Spectrometry Data Format Based on Standards-Compliant mzML and Optimized for Speed and Storage Requirements. PMID:32864978
BD5: An open HDF5-based data format to represent quantitative biological dynamics data. PMID:32785254
Toffee - a highly efficient, lossless file format for DIA-MS. PMID:32488104
Expanding the Use of Spectral Libraries in Proteomics. PMID:30270626
BASIS: High-performance bioinformatics platform for processing of large-scale mass spectrometry imaging data in chemically augmented histology. PMID:29511258
Fast, axis-agnostic, dynamically summarized storage and retrieval for mass spectrometry data. PMID:29141005
JS-MS: a cross-platform, modular javascript viewer for mass spectrometry signals. PMID:29110634
A Simple Method for Improving the Spatial Resolution in Infrared Laser Ablation Mass Spectrometry Imaging. PMID:28078485
The arc of Mass Spectrometry Exchange Formats is long, but it bends toward HDF5. PMID:27741559
Data standards can boost metabolomics research, and if there is a will, there is a way. PMID:26612985
Thermal proteome profiling for unbiased identification of direct and indirect drug targets using multiplexed quantitative mass spectrometry. PMID:26379230
mzDB: a file format using multiple indexing strategies for the efficient analysis of large LC-MS/MS and SWATH-MS data sets. PMID:25505153
Ion mobility tandem mass spectrometry enhances performance of bottom-up proteomics. PMID:25106551
Employing ProteoWizard to Convert Raw Mass Spectrometry Data. PMID:24939128
Numerical compression schemes for proteomics mass spectrometry data. PMID:24677029
Mass Spectrometry-based Proteomics and Peptidomics for Systems Biology and Biomarker Discovery. PMID:24504115
The HUPO proteomics standards initiative- mass spectrometry controlled vocabulary. PMID:23482073
Open source libraries and frameworks for mass spectrometry based proteomics: a developer's perspective. PMID:23467006
Controlled vocabularies and ontologies in proteomics: overview, principles and practice. PMID:23429179
File formats commonly used in mass spectrometry proteomics. PMID:22956731
QuaMeter: multivendor performance metrics for LC-MS/MS proteomics instrumentation. PMID:22697456
HDX workbench: software for the analysis of H/D exchange MS data. PMID:22692830
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mass spectrometry assay
metasource: Fairsharing.org
version: FAIRsharing.org: mz5; mz5; DOI: https://doi.org/10.25504/FAIRsharing.262bth; Last edited: Jan. 8, 2019, 1:32 p.m.; Last accessed: Jan 03 2022 7:10 p.m.
Tags
More detailed information about this field from each metasource.
mass spectrometry assay
metasource: Fairsharing.orgversion: FAIRsharing.org: mz5; mz5; DOI: https://doi.org/10.25504/FAIRsharing.262bth; Last edited: Jan. 8, 2019, 1:32 p.m.; Last accessed: Jan 03 2022 7:10 p.m.
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