iProX
Names
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iProX
metasource: Fairsharing.org
version: FAIRsharing.org: iProX; iProX; DOI: https://doi.org/10.25504/FAIRsharing.4Sj3vE; Last edited: May 4, 2020, 11:08 a.m.; Last accessed: Jan 03 2022 7:05 p.m.
metasource: bio.tools
version: extracted_at: 2022-11-04T11:24:23.917967
iprox
metasource: bio.tools
version: extracted_at: 2022-11-04T11:24:23.917967
Names
More detailed information about this field from each metasource.
iProX
metasource: Fairsharing.orgversion: FAIRsharing.org: iProX; iProX; DOI: https://doi.org/10.25504/FAIRsharing.4Sj3vE; Last edited: May 4, 2020, 11:08 a.m.; Last accessed: Jan 03 2022 7:05 p.m.
metasource: bio.tools
version: extracted_at: 2022-11-04T11:24:23.917967
iprox
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:24:23.917967
Names
More detailed information about this field from each metasource.
iProX
metasource: Fairsharing.orgversion: FAIRsharing.org: iProX; iProX; DOI: https://doi.org/10.25504/FAIRsharing.4Sj3vE; Last edited: May 4, 2020, 11:08 a.m.; Last accessed: Jan 03 2022 7:05 p.m.
metasource: bio.tools
version: extracted_at: 2022-11-04T11:24:23.917967
iprox
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:24:23.917967
iProX is a public platform for collecting and sharing raw data, analysis results and metadata obtained from proteomics experiments. The iProX repository employs a web-based proteome data submission process and open sharing of mass spectrometry-based proteomics datasets. iProX is a member of the ProteomeXchange (PX) consortium.
Description
More detailed information about this field from each metasource.
iProX is a public platform for collecting and sharing raw data, analysis results and metadata obtained from proteomics experiments. The iProX repository employs a web-based proteome data submission process and open sharing of mass spectrometry-based proteomics datasets. iProX is a member of the ProteomeXchange (PX) consortium.
metasource: Fairsharing.orgversion: FAIRsharing.org: iProX; iProX; DOI: https://doi.org/10.25504/FAIRsharing.4Sj3vE; Last edited: May 4, 2020, 11:08 a.m.; Last accessed: Jan 03 2022 7:05 p.m.
iProX is an integrated proteome resources center in China, which is built to accelerate the worldwide data sharing in proteomics. iProX is composed of a data submission system and a proteome database.
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:24:23.917967
Webpage:
https://www.iprox.org/Webpage
More detailed information about this field from each metasource.
https://www.iprox.org/
metasource: Fairsharing.orgversion: FAIRsharing.org: iProX; iProX; DOI: https://doi.org/10.25504/FAIRsharing.4Sj3vE; Last edited: May 4, 2020, 11:08 a.m.; Last accessed: Jan 03 2022 7:05 p.m.
https://www.iprox.cn
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:24:23.917967
Licence:
Name: iProX Data LicenceLicence name
More detailed information about this field from each metasource.
iProX Data Licence
metasource: Fairsharing.orgversion: FAIRsharing.org: iProX; iProX; DOI: https://doi.org/10.25504/FAIRsharing.4Sj3vE; Last edited: May 4, 2020, 11:08 a.m.; Last accessed: Jan 03 2022 7:05 p.m.
Licence URL
More detailed information about this field from each metasource.
https://www.iprox.org/page/iproxDataLisence.html
metasource: Fairsharing.orgversion: FAIRsharing.org: iProX; iProX; DOI: https://doi.org/10.25504/FAIRsharing.4Sj3vE; Last edited: May 4, 2020, 11:08 a.m.; Last accessed: Jan 03 2022 7:05 p.m.
Publications:
Publications
More detailed information about this field from each metasource.
iProX: an integrated proteome resource
PMID: 30252093
metasource: Fairsharing.org
version: FAIRsharing.org: iProX; iProX; DOI: https://doi.org/10.25504/FAIRsharing.4Sj3vE; Last edited: May 4, 2020, 11:08 a.m.; Last accessed: Jan 03 2022 7:05 p.m.
iProX in 2021: connecting proteomics data sharing with big data
PMID: 34871441
metasource: bio.tools
version: extracted_at: 2022-11-04T11:24:23.917967
Publications
More detailed information about this field from each metasource.
iProX: an integrated proteome resource
PMID: 30252093
metasource: Fairsharing.org
version: FAIRsharing.org: iProX; iProX; DOI: https://doi.org/10.25504/FAIRsharing.4Sj3vE; Last edited: May 4, 2020, 11:08 a.m.; Last accessed: Jan 03 2022 7:05 p.m.
iProX in 2021: connecting proteomics data sharing with big data
PMID: 34871441
metasource: bio.tools
version: extracted_at: 2022-11-04T11:24:23.917967
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iProX: an integrated proteome resource
PubMed citations: 288.
288 articles citing: iProX: an integrated proteome resource
Effect of Selenium Treatment on Central Insulin Sensitivity: A Proteomic Analysis in β-Amyloid Precursor Protein/Presenilin-1 Transgenic Mice. PMID:35875664
Validation of Serotransferrin in the Serum as Candidate Biomarkers for the Diagnosis of Pulmonary Tuberculosis by Label-Free LC/MS. PMID:35874208
Proteomic analysis reveals key differences between squamous cell carcinomas and adenocarcinomas across multiple tissues. PMID:35851595
Quantitative Analysis of the Protein Methylome Reveals PARP1 Methylation is involved in DNA Damage Response. PMID:35847980
Proteomics Study of the Synergistic Killing of Tigecycline in Combination With Aminoglycosides Against Carbapenem-Resistant Klebsiella pneumoniae. PMID:35846751
Spatially resolved proteomic map shows that extracellular matrix regulates epidermal growth. PMID:35817779
A protein-protein interaction map reveals that the Coxiella burnetii effector CirB inhibits host proteasome activity. PMID:35816513
Comprehensive Evaluation of Different TiO2-Based Phosphopeptide Enrichment and Fractionation Methods for Phosphoproteomics. PMID:35805136
Allergen protease-activated stress granule assembly and gasdermin D fragmentation control interleukin-33 secretion. PMID:35794369
Breast Meat Fatty Acid Profiling and Proteomic Analysis of Beijing-You Chicken During the Laying Period. PMID:35782537
Differential proteomics of placentas reveals metabolic disturbance and oxidative damage participate yak spontaneous miscarriage during late pregnancy. PMID:35761325
Proteomic Analysis of Human Milk Reveals Nutritional and Immune Benefits in the Colostrum from Mothers with COVID-19. PMID:35745243
Molecular Mechanisms of Phenylpropane-Synthesis-Related Genes Regulating the Shoot Blight Resistance of Bambusa pervariabilis × Dendrocalamopsis grandis. PMID:35743217
Integrative Proteome and Phosphoproteome Profiling of Early Cold Response in Maize Seedlings. PMID:35742945
A Quantitative Proteomic Approach Explores the Possible Mechanisms by Which the Small Molecule Stemazole Promotes the Survival of Human Neural Stem Cells. PMID:35741576
Tandem Mass Tag-Based Quantitative Proteomics Reveals Implication of a Late Embryogenesis Abundant Protein (BnLEA57) in Seed Oil Accumulation in Brassica napus L. PMID:35720596
H3K27ac mediated SS18/BAFs relocation regulates JUN induced pluripotent-somatic transition. PMID:35710570
Proteomic and clinical biomarkers for acute mountain sickness in a longitudinal cohort. PMID:35668171
Hepatocyte-derived MANF mitigates ethanol-induced liver steatosis in mice via enhancing ASS1 activity and activating AMPK pathway. PMID:35655095
Deep Learning-Based Protein Features Predict Overall Survival and Chemotherapy Benefit in Gastric Cancer. PMID:35651795
Label-Free Quantitative Proteomics Unravel the Impacts of Salt Stress on Dendrobium huoshanense. PMID:35646023
CBX4 contributes to HIV-1 latency by forming phase-separated nuclear bodies and SUMOylating EZH2. PMID:35642598
The Ube2m-Rbx1 neddylation-Cullin-RING-Ligase proteins are essential for the maintenance of Regulatory T cell fitness. PMID:35641500
Multicenter phase II trial of Camrelizumab combined with Apatinib and Eribulin in heavily pretreated patients with advanced triple-negative breast cancer. PMID:35641481
Explaining Unsaturated Fatty Acids (UFAs), Especially Polyunsaturated Fatty Acid (PUFA) Content in Subcutaneous Fat of Yaks of Different Sex by Differential Proteome Analysis. PMID:35627174
Comparative proteomic analysis identifies differentially expressed proteins and reveals potential mechanisms of traumatic heterotopic ossification progression. PMID:35615641
Proteomic Analysis Revealed Metabolic Inhibition and Elongation Factor Tu Deamidation by p-Coumaric Acid in Cronobacter sakazakii. PMID:35615519
Integration of Urine Proteomic and Metabolomic Profiling Reveals Novel Insights Into Neuroinflammation in Autism Spectrum Disorder. PMID:35615451
Alterations of Lysine Acetylation Profile in Murine Skeletal Muscles Upon Exercise. PMID:35592697
Noninvasive urinary protein signatures associated with colorectal cancer diagnosis and metastasis. PMID:35589723
Juvenile Hormone Membrane Signaling Enhances its Intracellular Signaling Through Phosphorylation of Met and Hsp83. PMID:35574494
Multi-Omic Profiling of Multi-Biosamples Reveals the Role of Amino Acid and Nucleotide Metabolism in Endometrial Cancer. PMID:35574395
2D-DIGE based proteome analysis of wheat-Thinopyrum intermedium 7XL/7DS translocation line under drought stress. PMID:35568798
The W-Acidic Motif of Histidine Kinase WalK Is Required for Signaling and Transcriptional Regulation in Streptococcus mutans. PMID:35558126
Gefitinib and fostamatinib target EGFR and SYK to attenuate silicosis: a multi-omics study with drug exploration. PMID:35551173
CIRBP-OGFR axis safeguards against cardiomyocyte apoptosis and cardiotoxicity induced by chemotherapy. PMID:35541895
The MFN1 and MFN2 mitofusins promote clustering between mitochondria and peroxisomes. PMID:35523862
A Nicotinamide Phosphoribosyltransferase Inhibitor, FK866, Suppresses the Growth of Anaplastic Meningiomas and Inhibits Immune Checkpoint Expression by Regulating STAT1. PMID:35515130
Proteomic insight into soybean response to flooding stress reveals changes in energy metabolism and cell wall modifications. PMID:35511817
Proteomic Investigation Reveals Eukaryotic Translation Initiation Factor 5A Involvement in Porcine Reproductive and Respiratory Syndrome Virus Infection in vitro. PMID:35498732
Investigation of chetomin as a lead compound and its biosynthetic pathway. PMID:35471617
PRSS37 deficiency leads to impaired energy metabolism in testis and sperm revealed by DIA-based quantitative proteomic analysis. PMID:35471551
Multidimensional Gene Regulatory Landscape of Motor Organ Pulvinus in the Model Legume Medicago truncatula. PMID:35457256
EGLN1 prolyl hydroxylation of hypoxia-induced transcription factor HIF1α is repressed by SET7-catalyzed lysine methylation. PMID:35452683
A proteogenomic analysis of clear cell renal cell carcinoma in a Chinese population. PMID:35440542
New Global Insights on the Regulation of the Biphasic Life Cycle and Virulence Via ClpP-Dependent Proteolysis in Legionella pneumophila. PMID:35427813
Suppression of CCT3 Inhibits Tumor Progression by Impairing ATP Production and Cytoplasmic Translation in Lung Adenocarcinoma. PMID:35409343
Integration of Metabolomics and Proteomics in Exploring the Endothelial Dysfunction Mechanism Induced by Serum Exosomes From Diabetic Retinopathy and Diabetic Nephropathy Patients. PMID:35399949
Compositional and toxicological investigation of pooled venom from farm-raised Naja atra. PMID:35382111
Proteomic landscape subtype and clinical prognosis of patients with the cognitive impairment by Japanese encephalitis infection. PMID:35379280
TMT-based proteomic analysis reveals integrins involved in the synergistic infection of reticuloendotheliosis virus and avian leukosis virus subgroup J. PMID:35379256
Plasma proteome profiling combined with clinical and genetic features reveals the pathophysiological characteristics of β-thalassemia. PMID:35378860
Efficacy and Mechanism of Buyang Huanwu Decoction in Patients With Ischemic Heart Failure: A Randomized, Double-Blind, Placebo-Controlled Trial Combined With Proteomic Analysis. PMID:35370712
Integrated proteomic and metabolomic analyses reveal significant changes in chloroplasts and mitochondria of pepper (Capsicum annuum L.) during Sclerotium rolfsii infection. PMID:35362898
A TMT-based shotgun proteomics uncovers overexpression of thrombospondin 1 as a contributor in pyrrolizidine alkaloid-induced hepatic sinusoidal obstruction syndrome. PMID:35357534
Integrated transcriptomic and proteomic analyses for the characterization of parathyroid oxyphil cells in uremic patients. PMID:35348903
PUMILIO proteins promote colorectal cancer growth via suppressing p21. PMID:35338151
Phosphorylation regulation of cardiac proteins in Babesia microti infected mice in an effort to restore heart function. PMID:35313969
Rewiring the Metabolic Network to Increase Docosahexaenoic Acid Productivity in Crypthecodinium cohnii by Fermentation Supernatant-Based Adaptive Laboratory Evolution. PMID:35308368
Characterization of protein unfolding by fast cross-linking mass spectrometry using di-ortho-phthalaldehyde cross-linkers. PMID:35304446
Plasma proteomic and metabolomic characterization of COVID-19 survivors 6 months after discharge. PMID:35288537
Differential response of physiology and metabolic response to drought stress in different sweetpotato cultivars. PMID:35271628
Comparative Proteomic Analysis of Drug Trichosanthin Addition to BeWo Cell Line. PMID:35268705
Use of ultra high performance liquid chromatography with high resolution mass spectrometry to analyze urinary metabolome alterations following acute kidney injury in post-cardiac surgery patients. PMID:35252948
LAP2α preserves genome integrity through assisting RPA deposition on damaged chromatin. PMID:35227284
An inducible CRISPR/Cas9 screen identifies DTX2 as a transcriptional regulator of human telomerase. PMID:35198878
Proteomic datasets of HeLa and SiHa cell lines acquired by DDA-PASEF and diaPASEF. PMID:35198691
Low-dose metformin targets the lysosomal AMPK pathway through PEN2. PMID:35197629
Long-Term Hepatitis B Virus Infection Induces Cytopathic Effects in Primary Human Hepatocytes, and Can Be Partially Reversed by Antiviral Therapy. PMID:35171034
Dynamic FMR1 granule phase switch instructed by m6A modification contributes to maternal RNA decay. PMID:35165263
Protective Effects of Bile Acids Against Hepatic Lipid Accumulation in Hybrid Grouper Fed a High-Lipid Diet. PMID:35145986
Proteomic and Phosphoryproteomic Investigations Reveal that Autophagy-Related Protein 1, a Protein Kinase for Autophagy Initiation, Synchronously Deploys Phosphoregulation on the Ubiquitin-Like Conjugation System in the Mycopathogen Beauveria bassiana. PMID:35133188
Comparative Metabolomics and Proteomics Reveal Vibrio parahaemolyticus Targets Hypoxia-Related Signaling Pathways of Takifugu obscurus. PMID:35095928
NMMHC IIA triggered lipid metabolize reprogramming resulting in vascular endothelial cellular tight junction injury. PMID:35064404
Proteomic identification of new diagnostic biomarkers of early-stage cutaneous mycosis fungoides. PMID:35049132
Differential proteomic analysis demonstrates follicle fluid participate immune reaction and protein translation in yak. PMID:35031034
Proteome evaluation of homolog abundance patterns in Arachis hypogaea cv. Tifrunner. PMID:35027052
Removal of antibiotic thiamphenicol by bacterium Aeromonas hydrophila HS01. PMID:35018528
Proteomic analysis of human hippocampal subfields provides new insights into the pathogenesis of Alzheimer's disease and the role of glial cells. PMID:35016256
Toxicokinetics of Arenobufagin and its Cardiotoxicity Mechanism Exploration Based on Lipidomics and Proteomics Approaches in Rats. PMID:35002716
Snake Venom Proteomics of Samar Cobra (Naja samarensis) from the Southern Philippines: Short Alpha-Neurotoxins as the Dominant Lethal Component Weakly Cross-Neutralized by the Philippine Cobra Antivenom. PMID:35002690
Replication and transcription machinery for ranaviruses: components, correlation, and functional architecture. PMID:34991685
Circulating proteomic panels for risk stratification of intracranial aneurysm and its rupture. PMID:34978375
Biophysical and biochemical properties of PHGDH revealed by studies on PHGDH inhibitors. PMID:34971423
Establishment of Human Pluripotent Stem Cell-Derived Skin Organoids Enabled Pathophysiological Model of SARS-CoV-2 Infection. PMID:34971128
Urine proteomics identifies biomarkers for diabetic kidney disease at different stages. PMID:34963468
Impact of the Glycemic Level on the Salivary Proteome of Middle-Aged and Elderly People With Type 2 Diabetes Mellitus: An Observational Study. PMID:34957219
Membrane proteomic analysis identifies the polarity protein PARD3 as a novel antiviral protein against PEDV infection. PMID:34954106
Diel Protein Regulation of Marine Picoplanktonic Communities Assessed by Metaproteomics. PMID:34946222
Revealing the Specific Regulations of Brassinolide on Tomato Fruit Chilling Injury by Integrated Multi-Omics. PMID:34926549
Proteomics and Organoid Culture Reveal the Underlying Pathogenesis of Hashimoto's Thyroiditis. PMID:34925365
Time-Resolved Extracellular Matrix Atlas of the Developing Human Skin Dermis. PMID:34901026
Periplocymarin Induced Colorectal Cancer Cells Apoptosis Via Impairing PI3K/AKT Pathway. PMID:34900704
African swine fever virus cysteine protease pS273R inhibits pyroptosis by noncanonically cleaving gasdermin D. PMID:34890644
Differential Protein Expression Analysis of Two Sugarcane Varieties in Response to Diazotrophic Plant Growth-Promoting Endophyte Enterobacter roggenkampii ED5. PMID:34887881
Transcriptome and proteome profiling revealed molecular mechanism of selenium responses in bread wheat (Triticum aestivum L.). PMID:34886810
Data-Independent Acquisition-Based Proteome and Phosphoproteome Profiling Reveals Early Protein Phosphorylation and Dephosphorylation Events in Arabidopsis Seedlings upon Cold Exposure. PMID:34884660
Proteomic analysis of a plastid gene encoding RPS4 mutant in Chinese cabbage (Brassica campestris L. ssp. pekinensis). PMID:34881421
Exploration of the Key Proteins of High-Grade Intraepithelial Neoplasia to Adenocarcinoma Sequence Using In-Depth Quantitative Proteomics Analysis. PMID:34880916
Gene excavation and expression analysis of CYP and UGT related to the post modifying stage of gypenoside biosynthesis in Gynostemma pentaphyllum (Thunb.) Makino by comprehensive analysis of RNA and proteome sequencing. PMID:34874937
iProX in 2021: connecting proteomics data sharing with big data. PMID:34871441
Quantitative Proteomic Analysis of Mouse Sciatic Nerve Reveals Post-injury Upregulation of ADP-Dependent Glucokinase Promoting Macrophage Phagocytosis. PMID:34867191
Cilia locally synthesize proteins to sustain their ultrastructure and functions. PMID:34848703
Genome-Wide Transcriptomic and Proteomic Exploration of Molecular Regulations in Quinoa Responses to Ethylene and Salt Stress. PMID:34834644
Proteostasis regulated by testis-specific ribosomal protein RPL39L maintains mouse spermatogenesis. PMID:34825148
Urinary peptidomics reveals proteases involved in idiopathic membranous nephropathy. PMID:34819020
DeepPhospho accelerates DIA phosphoproteome profiling through in silico library generation. PMID:34795227
The Heterotrimeric Transcription Factor CCAAT-Binding Complex and Ca2+-CrzA Signaling Reversely Regulate the Transition between Fungal Hyphal Growth and Asexual Reproduction. PMID:34781745
Integrative Multi-omics Landscape of Non-structural Protein 3 of Severe Acute Respiratory Syndrome Coronaviruses. PMID:34774773
Ubiquitin ligase MARCH5 localizes to peroxisomes to regulate pexophagy. PMID:34747980
Acetyl-CoA derived from hepatic mitochondrial fatty acid β-oxidation aggravates inflammation by enhancing p65 acetylation. PMID:34746707
The PRIDE database resources in 2022: a hub for mass spectrometry-based proteomics evidences. PMID:34723319
Quantitative analysis of phosphoproteome in necroptosis reveals a role of TRIM28 phosphorylation in promoting necroptosis-induced cytokine production. PMID:34689152
Proteomic Insights Into Susceptibility and Resistance to Chronic-Stress-Induced Depression or Anxiety in the Rat Striatum. PMID:34676246
An antibody-based proximity labeling map reveals mechanisms of SARS-CoV-2 inhibition of antiviral immunity. PMID:34672954
Urinary proteomics investigations into contrast-induced acute kidney injury. PMID:34669736
GproDIA enables data-independent acquisition glycoproteomics with comprehensive statistical control. PMID:34663801
Deep representation features from DreamDIAXMBD improve the analysis of data-independent acquisition proteomics. PMID:34650228
Comparative Phosphoproteomic Analysis Reveals the Response of Starch Metabolism to High-Temperature Stress in Rice Endosperm. PMID:34638888
Eosinophil extracellular traps drive asthma progression through neuro-immune signals. PMID:34616019
A proteomics sample metadata representation for multiomics integration and big data analysis. PMID:34615866
Wdr47, Camsaps, and Katanin cooperate to generate ciliary central microtubules. PMID:34608154
Proteomic Response of Rat Pituitary Under Chronic Mild Stress Reveals Insights Into Vulnerability and Resistance to Anxiety or Depression. PMID:34603401
SPOP mutation induces replication over-firing by impairing Geminin ubiquitination and triggers replication catastrophe upon ATR inhibition. PMID:34599168
Exploration of the typical features of tubulovillous adenoma using in-depth quantitative proteomics analysis. PMID:34585630
Bile acid metabolism dysregulation associates with cancer cachexia: roles of liver and gut microbiome. PMID:34585527
SPENCER: a comprehensive database for small peptides encoded by noncoding RNAs in cancer patients. PMID:34570216
Proteomics reveals the effects of drought stress on the kernel development and starch formation of waxy maize. PMID:34556041
Pan-cancer proteogenomic investigations identify post-transcriptional kinase targets. PMID:34552204
METTL3-mediated m6A RNA methylation promotes the anti-tumour immunity of natural killer cells. PMID:34535671
Discovery of bladder cancer biomarkers in paired pre- and postoperative urine samples. PMID:34532265
Wittig reagents for chemoselective sulfenic acid ligation enables global site stoichiometry analysis and redox-controlled mitochondrial targeting. PMID:34531572
Inhibition of a Novel CLK1-THRAP3-PPARγ Axis Improves Insulin Sensitivity. PMID:34526909
Establishment of a simplified dichotomic size-exclusion chromatography for isolating extracellular vesicles toward clinical applications. PMID:34514732
Dietary Supplementation With Creatine Pyruvate Alters Rumen Microbiota Protein Function in Heat-Stressed Beef Cattle. PMID:34512594
Gibberellins Inhibit Flavonoid Biosynthesis and Promote Nitrogen Metabolism in Medicago truncatula. PMID:34502200
Elucidating the Venom Diversity in Sri Lankan Spectacled Cobra (Naja naja) through De Novo Venom Gland Transcriptomics, Venom Proteomics and Toxicity Neutralization. PMID:34437429
Snake Venom Proteomics, Immunoreactivity and Toxicity Neutralization Studies for the Asiatic Mountain Pit Vipers, Ovophis convictus, Ovophis tonkinensis, and Hime Habu, Ovophis okinavensis. PMID:34437385
iTRAQ-based quantitative proteomic analysis of thoracic aortas from adult rats born to preeclamptic dams. PMID:34418970
Large-scale and high-resolution mass spectrometry-based proteomics profiling defines molecular subtypes of esophageal cancer for therapeutic targeting. PMID:34400640
Aberrant NAD+ metabolism underlies Zika virus-induced microcephaly. PMID:34385701
Differences in Grain Microstructure and Proteomics of a Broad Bean (Vicia faba L.) Landrace Cixidabaican in China Compared with Lingxiyicun Introduced from Japan. PMID:34371588
Quantitative Peptidomics of Mouse Brain After Infection With Cyst-Forming Toxoplasma gondii. PMID:34367142
Global effects of RAB3GAP1 dysexpression on the proteome of mouse cortical neurons. PMID:34363538
Identification of pimavanserin tartrate as a potent Ca2+-calcineurin-NFAT pathway inhibitor for glioblastoma therapy. PMID:34363007
DIA-Based Quantitative Proteomics Reveals the Protein Regulatory Networks of Floral Thermogenesis in Nelumbo nucifera. PMID:34361015
Proteome-Wide Profiling of Readers for DNA Modification. PMID:34351703
ppx: Programmatic Access to Proteomics Data Repositories. PMID:34342226
Comparative Proteomics and Phosphoproteomics Analysis Reveal the Possible Breed Difference in Yorkshire and Duroc Boar Spermatozoa. PMID:34336820
Quantification of Intact O-Glycopeptides on Haptoglobin in Sera of Patients With Hepatocellular Carcinoma and Liver Cirrhosis. PMID:34336790
Insulin signaling regulates longevity through protein phosphorylation in Caenorhabditis elegans. PMID:34315882
Identification of Proteomic Signatures in Chronic Obstructive Pulmonary Disease Emphysematous Phenotype. PMID:34277700
Proteomics and metabonomics analyses of Covid-19 complications in patients with pulmonary fibrosis. PMID:34272434
SARS-CoV-2 infection in the mouse olfactory system. PMID:34230457
SS18 regulates pluripotent-somatic transition through phase separation. PMID:34215745
Integrative proteomics reveals the role of E3 ubiquitin ligase SYVN1 in hepatocellular carcinoma metastasis. PMID:34196494
Exploration of the Key Proteins in the Normal-Adenoma-Carcinoma Sequence of Colorectal Cancer Evolution Using In-Depth Quantitative Proteomics. PMID:34194496
Universal Spectrum Identifier for mass spectra. PMID:34183830
Deep Dive on the Proteome of Human Body Fluids: A Valuable Data Resource for Biomarker Discovery. PMID:34183388
Identification of Dysregulated Complement Activation Pathways Driven by N-Glycosylation Alterations in T2D Patients. PMID:34178943
Proteomics Analysis Reveals Bacterial Antibiotics Resistance Mechanism Mediated by ahslyA Against Enoxacin in Aeromonas hydrophila. PMID:34168639
Dissecting the multi-omics atlas of the exosomes released by human lung adenocarcinoma stem-like cells. PMID:34127680
Proteomic Analysis Reveals That Placenta-Specific Protein 9 Inhibits Proliferation and Stimulates Motility of Human Bronchial Epithelial Cells. PMID:34123785
lncRNA lnc-POP1-1 upregulated by VN1R5 promotes cisplatin resistance in head and neck squamous cell carcinoma through interaction with MCM5. PMID:34111560
Proteomic Identification of Bombyx mori Organelles Using the Engineered Ascorbate Peroxidase APEX and Development of Silkworm Organelle Proteome Database (SilkOrganPDB). PMID:34068790
Acer Truncatum Seed Oil Alleviates Learning and Memory Impairments of Aging Mice. PMID:34055809
Computational Biology and Machine Learning Approaches to Understand Mechanistic Microbiome-Host Interactions. PMID:34046017
Mitochondrial proteome of mouse oocytes and cisplatin-induced shifts in protein profile. PMID:34017067
Proteomics, toxicity and antivenom neutralization of Sri Lankan and Indian Russell's viper (Daboia russelii) venoms. PMID:33995514
Comparative Transcriptomics and Proteomics Analyses of Leaves Reveals a Freezing Stress-Responsive Molecular Network in Winter Rapeseed (Brassica rapa L.). PMID:33995460
Oocyte-derived microvilli control female fertility by optimizing ovarian follicle selection in mice. PMID:33953177
Analysis of Serum Paraoxonase 1 Using Mass Spectrometry and Lectin Immunoassay in Patients With Alpha-Fetoprotein Negative Hepatocellular Carcinoma. PMID:33889548
Urine proteomics for profiling of mouse toxoplasmosis using liquid chromatography tandem mass spectrometry analysis. PMID:33879238
Urinary Proteomic Characteristics of Hyperuricemia and Their Possible Links with the Occurrence of Its Concomitant Diseases. PMID:33869930
Impaired AGO2/miR-185-3p/NRP1 axis promotes colorectal cancer metastasis. PMID:33846300
Quantitative acetylome analysis reveals histone modifications that may predict prognosis in hepatitis B-related hepatocellular carcinoma. PMID:33783990
Serum Metabolic Profiling Analysis of Chronic Gastritis and Gastric Cancer by Untargeted Metabolomics. PMID:33777793
Mapping Novel Biomarkers of Liver Injury by Tissue Proteomic Analysis. PMID:33748626
Analysis of Chronic Mild Stress-Induced Hypothalamic Proteome: Identification of Protein Dysregulations Associated With Vulnerability and Resiliency to Depression or Anxiety. PMID:33737865
Comprehensive transcriptomic and proteomic analyses identify intracellular targets for myriocin to induce Fusarium oxysporum f. sp. niveum cell death. PMID:33731109
Data Management of Sensitive Human Proteomics Data: Current Practices, Recommendations, and Perspectives for the Future. PMID:33711481
Comprehensive dynamic analysis of proteins in the spermatheca of female Haemaphysalis longicornis after copulation. PMID:33709252
Transcriptomic, proteomic, and physiological comparative analyses of flooding mitigation of the damage induced by low-temperature stress in direct seeded early indica rice at the seedling stage. PMID:33706696
Urine proteome of COVID-19 patients. PMID:33688631
Proteomic Analysis of Caspofungin-Induced Responses in Planktonic Cells and Biofilms of Candida albicans. PMID:33679674
Discovery of a first-in-class CDK2 selective degrader for AML differentiation therapy. PMID:33664520
Quantitative Secretome Analysis Reveals Clinical Values of Carbonic Anhydrase II in Hepatocellular Carcinoma. PMID:33662630
Endogenous SO2-dependent Smad3 redox modification controls vascular remodeling. PMID:33647858
Lipidomic alteration of plasma in cured COVID-19 patients using ultra high-performance liquid chromatography with high-resolution mass spectrometry. PMID:33635316
Chronic mild stress-induced protein dysregulations correlated with susceptibility and resiliency to depression or anxiety revealed by quantitative proteomics of the rat prefrontal cortex. PMID:33627638
EMC3 Is Essential for Retinal Organization and Neurogenesis During Mouse Retinal Development. PMID:33605987
Identification of stress defensive proteins in common wheat-Thinopyron intermedium translocation line YW642 developing grains via comparative proteome analysis. PMID:33603547
Quantitative Proteomics Reveals Association of Neuron Projection Development Genes ARF4, KIF5B, and RAB8A With Hirschsprung Disease. PMID:33561610
Long noncoding RNA SMUL suppresses SMURF2 production-mediated muscle atrophy via nonsense-mediated mRNA decay. PMID:33510940
Extracellular Vesicles Derived From Talaromyces marneffei Yeasts Mediate Inflammatory Response in Macrophage Cells by Bioactive Protein Components. PMID:33488545
SUMOylation disassembles the tetrameric pyruvate kinase M2 to block myeloid differentiation of leukemia cells. PMID:33473116
A Neurotoxic Snake Venom without Phospholipase A2: Proteomics and Cross-Neutralization of the Venom from Senegalese Cobra, Naja senegalensis (Subgenus: Uraeus). PMID:33466660
Changes on proteomic and metabolomic profile in serum of mice induced by chronic exposure to tramadol. PMID:33446901
ACOX2 is a prognostic marker and impedes the progression of hepatocellular carcinoma via PPARα pathway. PMID:33414412
Exploration of Serum Marker Proteins in Mice Induced by Babesia microti Infection Using a Quantitative Proteomic Approach. PMID:33387247
iTRAQ-Based Phosphoproteomic Analysis of Toxoplasma gondii Tachyzoites Provides Insight Into the Role of Phosphorylation for its Invasion and Egress. PMID:33363051
Relief of Cadmium-Induced Intestinal Motility Disorder in Mice by Lactobacillus plantarum CCFM8610. PMID:33362802
Integrated Transcriptomic and Proteomic Analyses Reveal the Role of NprR in Bacillus anthracis Extracellular Protease Expression Regulation and Oxidative Stress Responses. PMID:33362738
Proteome-Wide Alterations of Asymmetric Arginine Dimethylation Associated With Pancreatic Ductal Adenocarcinoma Pathogenesis. PMID:33344439
Comparative proteomic analysis reveals novel insights into the interaction between rice and Xanthomonas oryzae pv. oryzae. PMID:33317452
Proteome sequencing and analysis of Ophiocordyceps sinensis at different culture periods. PMID:33308160
Effective Inhibition of MYC-Amplified Group 3 Medulloblastoma Through Targeting EIF4A1. PMID:33299354
Comparative proteomics of three Chinese potato cultivars to improve understanding of potato molecular response to late blight disease. PMID:33297944
Serum biomarker analysis at the protein level on pulmonary hypertension secondary to old anterior myocardial infarction. PMID:33282196
Cytotoxicity of Snake Venoms and Cytotoxins From Two Southeast Asian Cobras (Naja sumatrana, Naja kaouthia): Exploration of Anticancer Potential, Selectivity, and Cell Death Mechanism. PMID:33263003
BRLF1 suppresses RNA Pol III-mediated RIG-I inflammasome activation in the early EBV lytic lifecycle. PMID:33225563
Comprehensive proteomic atlas of skin biomatrix scaffolds reveals a supportive microenvironment for epidermal development. PMID:33224464
Continuous High Frequency Deep Brain Stimulation of the Rat Anterior Insula Attenuates the Relapse Post Withdrawal and Strengthens the Extinction of Morphine Seeking. PMID:33173522
Proteomic Analysis of UV-B-Induced Virulence-Mutant Strains of Puccinia striiformis f. sp. tritici Based on iTRAQ Technology. PMID:33133029
Plasma Proteomics Identify Biomarkers and Pathogenesis of COVID-19. PMID:33128875
Molecular Characterization of a Novel Shell Matrix Protein With PDZ Domain From Mytilus coruscus. PMID:33123020
Comparative proteomic analysis of silica-induced pulmonary fibrosis in rats based on tandem mass tag (TMT) quantitation technology. PMID:33119648
A Transcriptomic and Proteomic Analysis of the Diaphorina citri Salivary Glands Reveals Genes Responding to Candidatus Liberibacter asiaticus. PMID:33101062
Protein structure, amino acid composition and sequence determine proteome vulnerability to oxidation-induced damage. PMID:33073387
Distinct expression profiles of peptides in placentae from preeclampsia and normal pregnancies. PMID:33067549
A high-stringency blueprint of the human proteome. PMID:33067450
Pathological features of COVID-19-associated lung injury: a preliminary proteomics report based on clinical samples. PMID:33060566
Investigation on Intestinal Proteins and Drug Metabolizing Enzymes in Simulated Microgravity Rats by a Proteomics Method. PMID:32987831
Both Wnt signaling and epidermal stem cell-derived extracellular vesicles are involved in epidermal cell growth. PMID:32967725
Serum sCD14, PGLYRP2 and FGA as potential biomarkers for multidrug-resistant tuberculosis based on data-independent acquisition and targeted proteomics. PMID:32967043
Research on the Human Proteome Reaches a Major Milestone: >90% of Predicted Human Proteins Now Credibly Detected, According to the HUPO Human Proteome Project. PMID:32931287
Proteomics study on the protective mechanism of soybean isoflavone against inflammation injury of bovine mammary epithelial cells induced by Streptococcus agalactiae. PMID:32865767
Lysine-222 succinylation reduces lysosomal degradation of lactate dehydrogenase a and is increased in gastric cancer. PMID:32859246
Identification of Hydroxyproline-Containing Proteins and Hydroxylation of Proline Residues in Rice. PMID:32849749
Virus-Host Interactome and Proteomic Survey Reveal Potential Virulence Factors Influencing SARS-CoV-2 Pathogenesis. PMID:32838362
Licorice-Yuanhua Herbal Pair Induces Ileum Injuries Through Weakening Epithelial and Mucous Barrier Functions: Saponins, Flavonoids, and Di-Terpenes All Involved. PMID:32765254
Comprehensive transcriptomic and proteomic analyses of antroquinonol biosynthetic genes and enzymes in Antrodia camphorata. PMID:32748086
Cytotoxic and anticancer properties of the Malaysian mangrove pit viper (Trimeresurus purpureomaculatus) venom and its disintegrin (purpureomaculin). PMID:32742279
iTRAQ protein profile analysis of sugar beet under salt stress: different coping mechanisms in leaves and roots. PMID:32698773
Functional Microbiota for Polypeptide Degradation during Hypertonic Moromi-Fermentation of Pixian Broad Bean Paste. PMID:32674449
Structural snapshots of human pre-60S ribosomal particles before and after nuclear export. PMID:32669547
The Neuroproteomic Basis of Enhanced Perception and Processing of Brood Signals That Trigger Increased Reproductive Investment in Honeybee (Apis mellifera) Workers. PMID:32669299
The Role and Underlying Mechanism of Exosomal CA1 in Chemotherapy Resistance in Diffuse Large B Cell Lymphoma. PMID:32668392
20(S)-Protopanaxatriol promotes the binding of P53 and DNA to regulate the antitumor network via multiomic analysis. PMID:32642409
Time-resolved multi-omics analysis reveals the role of nutrient stress-induced resource reallocation for TAG accumulation in oleaginous fungus Mortierella alpina. PMID:32625246
Transcriptome Sequencing and iTRAQ of Different Rice Cultivars Provide Insight into Molecular Mechanisms of Cold-Tolerance Response in Japonica Rice. PMID:32572635
iTRAQ-Based Proteomic Profile Analysis of the Hepatopancreas of Caribbean Spiny Lobsters Infected With Panulirus argus Virus 1: Metabolic and Physiological Implications. PMID:32547519
NQO1 is a determinant for cellular sensitivity to anti-tumor agent Napabucasin. PMID:32509390
Differential proteomic analysis of fetal and geriatric lumbar nucleus pulposus: immunoinflammation and age-related intervertebral disc degeneration. PMID:32487144
Proteome Profiling of Lung Tissues in Chronic Obstructive Pulmonary Disease (COPD): Platelet and Macrophage Dysfunction Contribute to the Pathogenesis of COPD. PMID:32440109
An integrative multi-omics approach uncovers the regulatory role of CDK7 and CDK4 in autophagy activation induced by silica nanoparticles. PMID:32397800
CD41-deficient exosomes from non-traumatic femoral head necrosis tissues impair osteogenic differentiation and migration of mesenchymal stem cells. PMID:32341357
O2-Tuned Protein Synthesis Machinery in Escherichia coli-Based Cell-Free System. PMID:32328487
Integrated Transcriptomic and Proteomic Analyses of the Interaction Between Chicken Synovial Fibroblasts and Mycoplasma synoviae. PMID:32318048
A Brain Signaling Framework for Stress-Induced Depression and Ketamine Treatment Elucidated by Phosphoproteomics. PMID:32317933
Comparative Proteomic Investigation of Plasma Reveals Novel Potential Biomarker Groups for Acute Aortic Dissection. PMID:32256857
An oncopeptide regulates m6A recognition by the m6A reader IGF2BP1 and tumorigenesis. PMID:32245947
Ubiquitin Linkage Specificity of Deubiquitinases Determines Cyclophilin Nuclear Localization and Degradation. PMID:32240951
Metaproteomics characterizes human gut microbiome function in colorectal cancer. PMID:32210237
Structural and Functional Changes in Prokaryotic Communities in Artificial Pit Mud during Chinese Baijiu Production. PMID:32209718
Comparative proteomics analysis of Tibetan hull-less barley under osmotic stress via data-independent acquisition mass spectrometry. PMID:32126136
Hybrid Spectral Library Combining DIA-MS Data and a Targeted Virtual Library Substantially Deepens the Proteome Coverage. PMID:32109675
Proteomic analysis of the antimicrobial effects of sublethal concentrations of thymol on Salmonella enterica serovar Typhimurium. PMID:32072194
A time-resolved multi-omic atlas of the developing mouse liver. PMID:32051188
Identification and Comparative Analysis of Venom Proteins in a Pupal Ectoparasitoid, Pachycrepoideus vindemmiae. PMID:32038312
Metabolic Exchange with Non-Alkane-Consuming Pseudomonas stutzeri SLG510A3-8 Improves n-Alkane Biodegradation by the Alkane Degrader Dietzia sp. Strain DQ12-45-1b. PMID:32033953
Integrated proteomic and metabolomic analysis to study the effects of spaceflight on Candida albicans. PMID:31952470
In silico spectral libraries by deep learning facilitate data-independent acquisition proteomics. PMID:31919359
Quantitative proteomic analyses of two soybean low phytic acid mutants to identify the genes associated with seed field emergence. PMID:31856712
Differential Proteome Analysis of Hybrid Bamboo (Bambusa pervariabilis × Dendrocalamopsis grandis) Under Fungal Stress (Arthrinium phaeospermum). PMID:31822726
Proteomics-Based Mechanistic Investigation of Escherichia coli Inactivation by Pulsed Electric Field. PMID:31781086
Preventive Effects of Fluoro-Substituted Benzothiadiazole Derivatives and Chitosan Oligosaccharide against the Rice Seedling Blight Induced by Fusarium oxysporum. PMID:31771294
Integrated Meta-omics Approaches To Understand the Microbiome of Spontaneous Fermentation of Traditional Chinese Pu-erh Tea. PMID:31744906
Deciphering the Functioning of Microbial Communities: Shedding Light on the Critical Steps in Metaproteomics. PMID:31708885
The ProteomeXchange consortium in 2020: enabling 'big data' approaches in proteomics. PMID:31686107
Membrane proteomic analysis reveals the intestinal development is deteriorated by intrauterine growth restriction in piglets. PMID:31586277
Mass Spectrometry-Based Plasma Proteomics: Considerations from Sample Collection to Achieving Translational Data. PMID:31573204
SWPepNovo: An Efficient De Novo Peptide Sequencing Tool for Large-scale MS/MS Spectra Analysis. PMID:31523183
NAL8 encodes a prohibitin that contributes to leaf and spikelet development by regulating mitochondria and chloroplasts stability in rice. PMID:31510917
N-glycopeptide Signatures of IgA2 in Serum from Patients with Hepatitis B Virus-related Liver Diseases. PMID:31501225
High-throughput proteomic analysis of FFPE tissue samples facilitates tumor stratification. PMID:31495056
NOP2/Sun RNA methyltransferase 2 promotes tumor progression via its interacting partner RPL6 in gallbladder carcinoma. PMID:31487418
iTRAQ-based quantitative proteomic and physiological analysis of the response to N deficiency and the compensation effect in rice. PMID:31462233
Progress on Identifying and Characterizing the Human Proteome: 2019 Metrics from the HUPO Human Proteome Project. PMID:31430157
Differential Proteomics Based on TMT and PRM Reveal the Resistance Response of Bambusa pervariabilis × Dendrocalamopisis grandis Induced by AP-Toxin. PMID:31405188
The deubiquitylase OTUD3 stabilizes GRP78 and promotes lung tumorigenesis. PMID:31266968
In-depth serum proteomics reveals biomarkers of psoriasis severity and response to traditional Chinese medicine. PMID:31131048
iTRAQ-Based Quantitative Proteomics and Transcriptomics Provide Insights Into the Importance of Expansins During Root Development in Carrot. PMID:30984239
An improved protein extraction method applied to cotton leaves is compatible with 2-DE and LC-MS. PMID:30975097
Velvet Antler Mobilizes Endothelial Progenitor Cells to Promote Angiogenesis and Repair Vascular Endothelial Injury in Rats Following Myocardial Infarction. PMID:30705637
The 26th annual Nucleic Acids Research database issue and Molecular Biology Database Collection. PMID:30626175
A region-resolved mucosa proteome of the human stomach. PMID:30604760
Global profiling of megalocytivirus-induced proteins in tongue sole (Cynoglossus semilaevis) spleen identifies cellular processes essential to viral infection. PMID:30428365 -
iProX in 2021: connecting proteomics data sharing with big data
PubMed citations: 1.
1 articles citing: iProX in 2021: connecting proteomics data sharing with big data
The 2022 Nucleic Acids Research database issue and the online molecular biology database collection. PMID:34986604
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More detailed information about this field from each metasource.
mass spectrometry assay
metasource: Fairsharing.org
version: FAIRsharing.org: iProX; iProX; DOI: https://doi.org/10.25504/FAIRsharing.4Sj3vE; Last edited: May 4, 2020, 11:08 a.m.; Last accessed: Jan 03 2022 7:05 p.m.
peptide
metasource: Fairsharing.org
version: FAIRsharing.org: iProX; iProX; DOI: https://doi.org/10.25504/FAIRsharing.4Sj3vE; Last edited: May 4, 2020, 11:08 a.m.; Last accessed: Jan 03 2022 7:05 p.m.
protein
metasource: Fairsharing.org
version: FAIRsharing.org: iProX; iProX; DOI: https://doi.org/10.25504/FAIRsharing.4Sj3vE; Last edited: May 4, 2020, 11:08 a.m.; Last accessed: Jan 03 2022 7:05 p.m.
proteomics
metasource: bio.tools
version: extracted_at: 2022-11-04T11:24:23.917967
sequence analysis
metasource: bio.tools
version: extracted_at: 2022-11-04T11:24:23.917967
proteomics experiment
metasource: bio.tools
version: extracted_at: 2022-11-04T11:24:23.917967
nucleic acids
metasource: bio.tools
version: extracted_at: 2022-11-04T11:24:23.917967
small molecules
metasource: bio.tools
version: extracted_at: 2022-11-04T11:24:23.917967
Tags
More detailed information about this field from each metasource.
mass spectrometry assay
metasource: Fairsharing.orgversion: FAIRsharing.org: iProX; iProX; DOI: https://doi.org/10.25504/FAIRsharing.4Sj3vE; Last edited: May 4, 2020, 11:08 a.m.; Last accessed: Jan 03 2022 7:05 p.m.
peptide
metasource: Fairsharing.orgversion: FAIRsharing.org: iProX; iProX; DOI: https://doi.org/10.25504/FAIRsharing.4Sj3vE; Last edited: May 4, 2020, 11:08 a.m.; Last accessed: Jan 03 2022 7:05 p.m.
protein
metasource: Fairsharing.orgversion: FAIRsharing.org: iProX; iProX; DOI: https://doi.org/10.25504/FAIRsharing.4Sj3vE; Last edited: May 4, 2020, 11:08 a.m.; Last accessed: Jan 03 2022 7:05 p.m.
proteomics
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:24:23.917967
sequence analysis
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:24:23.917967
proteomics experiment
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:24:23.917967
nucleic acids
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:24:23.917967
small molecules
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:24:23.917967
mass spectrometry assay peptide protein proteomics sequence analysis proteomics experiment nucleic acids small molecule
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