Scrutinizing pathogenicity of the USH2A c.2276 G > T; p.(Cys759Phe) variant.
PMID:35672333
Analysis of the MCTP Amino Acid Sequence Reveals the Conservation of Putative Calcium- and Lipid-Binding Pockets Within the C2 Domains In Silico.
PMID:35604448
Comprehensive in silico modeling of the rice plant PRR Xa21 and its interaction with RaxX21-sY and OsSERK2.
PMID:35493652
Molecular Epidemiology and Colistin-Resistant Mechanism of mcr-Positive and mcr-Negative Escherichia coli Isolated From Animal in Sichuan Province, China.
PMID:35422787
Systematic Analysis and Expression Profiles of the 4-Coumarate: CoA Ligase (4CL) Gene Family in Pomegranate (Punica granatum L.).
PMID:35408870
Genes Encoding the Glycoprotein Hormone GPA2/GPB5 and the Receptor LGR1 in a Female Prawn.
PMID:35399936
Pervasive occurrence of splice-site-creating mutations and their possible involvement in genetic disorders.
PMID:35304488
A High-Quality, Chromosome-Level Genome Provides Insights Into Determinate Flowering Time and Color of Cotton Rose (Hibiscus mutabilis).
PMID:35251086
Candida albicans END3 Mediates Endocytosis and Has Subsequent Roles in Cell Wall Integrity, Morphological Switching, and Tissue Invasion.
PMID:35234488
Genome-Wide Evolution and Comparative Analysis of Superoxide Dismutase Gene Family in Cucurbitaceae and Expression Analysis of Lagenaria siceraria Under Multiple Abiotic Stresses.
PMID:35211150
Identification and Expression Analysis of the Populus trichocarpa GASA-Gene Family.
PMID:35163431
Identification and Characterization of a Novel Plasmid-Encoded Laccase-Like Multicopper Oxidase from Ochrobactrum sp. BF15 Isolated from an On-Farm Bio-Purification System.
PMID:35136375
Genome-wide analysis of TALE superfamily in Triticum aestivum reveals TaKNOX11-A is involved in abiotic stress response.
PMID:35100988
Universal gene co-expression network reveals receptor-like protein genes involved in broad-spectrum resistance in pepper (Capsicum annuum L.).
PMID:35043174
Integrated bioinformatics based subtractive genomics approach to decipher the therapeutic function of hypothetical proteins from Salmonella typhi XDR H-58 strain.
PMID:35037232
The role of junctophilin proteins in cellular function.
PMID:35001666
Plasmodium berghei-Released Factor, PbTIP, Modulates the Host Innate Immune Responses.
PMID:34987497
Comparative de novo transcriptome analysis identifies salinity stress responsive genes and metabolic pathways in sugarcane and its wild relative Erianthus arundinaceus [Retzius] Jeswiet.
PMID:34972826
Genome-Wide Identification, Characterization, and Expression Analysis of DDE_Tnp_4 Family Genes in Eriocheir sinensis.
PMID:34943642
Phylogenetic Analysis with Prediction of Cofactor or Ligand Binding for Pseudomonas aeruginosa PAS and Cache Domains.
PMID:34937179
Genome-wide identification and characterization of legume T2 Ribonuclease gene family and analysis of GmaRNS9, a soybean T2 Ribonuclease gene, function in nodulation.
PMID:34881158
Evolution of variable lymphocyte receptor B antibody loci in jawless vertebrates.
PMID:34880135
Identification of WRKY transcription factors responding to abiotic stresses in Brassica napus L.
PMID:34837557
Genetic Variability of the Functional Domains of Chromodomains Helicase DNA-Binding (CHD) Proteins.
PMID:34828433
Genome-Wide Analysis of the Glutathione S-Transferase (GST) Genes and Functional Identification of MdGSTU12 Reveals the Involvement in the Regulation of Anthocyanin Accumulation in Apple.
PMID:34828339
The evolution of the metazoan Toll receptor family and its expression during protostome development.
PMID:34809567
Genome-wide identification and expression profiling of Alba gene family members in response to abiotic stress in tomato (Solanum lycopersicum L.).
PMID:34772358
Two apolipoproteins in salmon louse (Lepeophtheirus salmonis), apolipoprotein 1 knock down reduces reproductive capacity.
PMID:34729423
Genome-wide identification, classification, and expression analysis of the JmjC domain-containing histone demethylase gene family in birch.
PMID:34711171
Genome-Wide Identification and Low-Temperature Expression Analysis of bHLH Genes in Prunus mume.
PMID:34659372
Candida albicans ENT2 Contributes to Efficient Endocytosis, Cell Wall Integrity, Filamentation, and Virulence.
PMID:34585966
The Only Chemoreceptor Encoded by che Operon Affects the Chemotactic Response of Agrobacterium to Various Chemoeffectors.
PMID:34576817
Interactome and evolutionary conservation of Dictyostelid small GTPases and their direct regulators.
PMID:34565293
AprGPD: the apricot genomic and phenotypic database.
PMID:34556150
The function of twister ribozyme variants in non-LTR retrotransposition in Schistosoma mansoni.
PMID:34551436
Classification of protein domains based on their three-dimensional shapes (CPD3DS).
PMID:34541344
Transcriptome Analysis Reveals Key Genes Involved in Weevil Resistance in the Hexaploid Sweetpotato.
PMID:34451581
Expression of immunoglobulin constant domain genes in neurons of the mouse central nervous system.
PMID:34433614
Ankyrin repeats in context with human population variation.
PMID:34428215
The DUF221 domain-containing (DDP) genes identification and expression analysis in tomato under abiotic and phytohormone stress.
PMID:34379048
AQPX-cluster aquaporins and aquaglyceroporins are asymmetrically distributed in trypanosomes.
PMID:34376792
Taxallnomy: an extension of NCBI Taxonomy that produces a hierarchically complete taxonomic tree.
PMID:34325658
Identification, cloning, and characterization of Cherry Valley duck CD4 and its antiviral immune responses.
PMID:34273645
A discarded synonymous variant in NPHP3 explains nephronophthisis and congenital hepatic fibrosis in several families.
PMID:34212438
Molecular Inversion Probe-Based Sequencing of USH2A Exons and Splice Sites as a Cost-Effective Screening Tool in USH2 and arRP Cases.
PMID:34203967
Genome-wide identification of auxin response factor (ARF) family in kiwifruit (Actinidia chinensis) and analysis of their inducible involvements in abiotic stresses.
PMID:34177147
Genome-Wide Identification and Transcript Analysis of TCP Gene Family in Banana (Musa acuminata L.).
PMID:34156635
COSMIC Cancer Gene Census 3D database: understanding the impacts of mutations on cancer targets.
PMID:34137435
Genome-wide characterization of carotenoid oxygenase gene family in three cotton species and functional identification of GaNCED3 in drought and salt stress.
PMID:34109531
Genes encoding putative bicarbonate transporters as a missing molecular link between molt and mineralization in crustaceans.
PMID:34083647
Genome-Wide Analysis of the DUF4228 Family in Soybean and Functional Identification of GmDUF4228 -70 in Response to Drought and Salt Stresses.
PMID:34079564
Genome-wide identification and expression analysis of the AT-hook Motif Nuclear Localized gene family in soybean.
PMID:34006214
Genome-wide analysis of the serine carboxypeptidase-like protein family in Triticum aestivum reveals TaSCPL184-6D is involved in abiotic stress response.
PMID:33992092
CmMLO17 and its partner CmKIC potentially support Alternaria alternata growth in Chrysanthemum morifolium.
PMID:33931614
DCTN1 Binds to TDP-43 and Regulates TDP-43 Aggregation.
PMID:33924373
Composition and function of ciliary inner-dynein-arm subunits studied in Chlamydomonas reinhardtii.
PMID:33876572
Building blocks and blueprints for bacterial autolysins.
PMID:33793553
Cloning, analysis, and anti-duck Tembusu virus innate immune response of Cherry Valley duck tripartite motif-containing 32.
PMID:33744610
Microglial trogocytosis and the complement system regulate axonal pruning in vivo.
PMID:33724186
Protein domain identification methods and online resources.
PMID:33680357
The prohibitins (PHB) gene family in tomato: Bioinformatic identification and expression analysis under abiotic and phytohormone stresses.
PMID:33678114
Prokaryotic Solute/Sodium Symporters: Versatile Functions and Mechanisms of a Transporter Family.
PMID:33668649
Ccdc113/Ccdc96 complex, a novel regulator of ciliary beating that connects radial spoke 3 to dynein g and the nexin link.
PMID:33661892
The molecular targets of ivermectin and lotilaner in the human louse Pediculus humanus humanus: New prospects for the treatment of pediculosis.
PMID:33600484
Identification and Characterization of Four c-di-GMP-Metabolizing Enzymes from Streptomyces ghanaensis ATCC14672 Involved in the Regulation of Morphogenesis and Moenomycin A Biosynthesis.
PMID:33573171
Choanoflagellates and the ancestry of neurosecretory vesicles.
PMID:33550951
A novel LysR-type regulator negatively affects biosynthesis of the immunosuppressant brasilicardin.
PMID:33531886
Pseudomonas aeruginosa Uses c-di-GMP Phosphodiesterases RmcA and MorA To Regulate Biofilm Maintenance.
PMID:33531388
Comparative Analysis of Transcriptome and sRNAs Expression Patterns in the Brachypodium distachyon- Magnaporthe oryzae Pathosystems.
PMID:33440747
Plasma membrane aquaporins interact with the endoplasmic reticulum resident VAP27 proteins at ER-PM contact sites and endocytic structures.
PMID:33410187
Structural Aspects and Prediction of Calmodulin-Binding Proteins.
PMID:33396740
An Educational Bioinformatics Project to Improve Genome Annotation.
PMID:33365016
IiWRKY34 positively regulates yield, lignan biosynthesis and stress tolerance in Isatis indigotica.
PMID:33354511
Locus-specific paramutation in Zea mays is maintained by a PICKLE-like chromodomain helicase DNA-binding 3 protein controlling development and male gametophyte function.
PMID:33320854
Identification and functional characterization of ABCC transporters for Cd tolerance and accumulation in Sedum alfredii Hance.
PMID:33262396
Transcriptome-wide identification of MAPKKK genes in bermudagrass (Cynodon dactylon L.) and their potential roles in low temperature stress responses.
PMID:33194398
The Transcriptome of Cunninghamia lanceolata male/female cone reveal the association between MIKC MADS-box genes and reproductive organs development.
PMID:33153428
Plasmodium DEH is ER-localized and crucial for oocyst mitotic division during malaria transmission.
PMID:33106323
SMART: recent updates, new developments and status in 2020.
PMID:33104802
Genome-Wide Identification, Classification, Characterization, and Expression Analysis of the Wall-Associated Kinase Family during Fruit Development and under Wound Stress in Tomato (Solanum lycopersicum L.).
PMID:33053790
Double-Stranded RNA Binding Proteins in Serum Contribute to Systemic RNAi Across Phyla-Towards Finding the Missing Link in Achelata.
PMID:32971953
Genome-Wide Identification and Characterization of the SHI-Related Sequence Gene Family in Rice.
PMID:32963469
Genome-wide identification and analysis of GRAS transcription factors in the bottle gourd genome.
PMID:32868844
In silico identification of pseudo-exon activation events in personal genome and transcriptome data.
PMID:32865117
Comparative analysis of ankyrin (ANK) genes of five capripoxviruses isolate strains from Xinjiang province in China.
PMID:32859219
Ustilago maydis Serves as a Novel Production Host for the Synthesis of Plant and Fungal Sesquiterpenoids.
PMID:32849341
Genetic Determinants of Salmonella Resistance to the Biofilm-Inhibitory Effects of a Synthetic 4-Oxazolidinone Analog.
PMID:32769186
Antimicrobial Peptides and Ectosymbiotic Relationships: Involvement of a Novel Type IIa Crustin in the Life Cycle of a Deep-Sea Vent Shrimp.
PMID:32765521
Structure and function of the juxtamembrane GAF domain of potassium biosensor KdpD.
PMID:32713093
Anionic Lipids Impact RAS-Binding Site Accessibility and Membrane Binding Affinity of CRAF RBD-CRD.
PMID:32649863
Functional shell matrix proteins tentatively identified by asymmetric snail shell morphology.
PMID:32555253
Putative circumsporozoite protein (CSP) of Plasmodium vivax is considerably distinct from the well-known CSP and plays a role in the protein ubiquitination pathway.
PMID:32550551
Comparative Gene Analysis Focused on Silica Cell Wall Formation: Identification of Diatom-Specific SET Domain Protein Methyltransferases.
PMID:32488507
Differential gene expression in response to water deficit in leaf and root tissues of soybean genotypes with contrasting tolerance profiles.
PMID:32478791
STARCH SYNTHASE5, a Noncanonical Starch Synthase-Like Protein, Promotes Starch Granule Initiation in Arabidopsis.
PMID:32471861
ATP Hydrolysis by the SNF2 Domain of Dnmt5 Is Coupled to Both Specific Recognition and Modification of Hemimethylated DNA.
PMID:32437639
Living in a Foster Home: The Single Subpolar Flagellum Fla1 of Rhodobacter sphaeroides.
PMID:32429424
Loss of the Polyketide Synthase StlB Results in Stalk Cell Overproduction in Polysphondylium violaceum.
PMID:32386295
Genetic basis for virulence differences of various Cryptosporidium parvum carcinogenic isolates.
PMID:32355272
Specificity in PDZ-peptide interaction networks: Computational analysis and review.
PMID:32289118
Characterization of the Auxin Efflux Transporter PIN Proteins in Pear.
PMID:32164258
Molecular cloning and expression analysis of tyrosinases (tyr) in four shell-color strains of Manila clam Ruditapes philippinarum.
PMID:32110498
Structural basis of cell-surface signaling by a conserved sigma regulator in Gram-negative bacteria.
PMID:32107313
Systematic analysis of the Hippo pathway organization and oncogenic alteration in evolution.
PMID:32081887
Drosophila ELYS regulates Dorsal dynamics during development.
PMID:31941789
Transgenic Testing Does Not Support a Role for Additional Candidate Genes in Wolbachia Male Killing or Cytoplasmic Incompatibility.
PMID:31937677
Interaction of a Novel Zn2Cys6 Transcription Factor DcGliZ with Promoters in the Gliotoxin Biosynthetic Gene Cluster of the Deep-Sea-Derived Fungus Dichotomomyces cejpii.
PMID:31905743
Comprehensive genomic analysis of the DUF4228 gene family in land plants and expression profiling of ATDUF4228 under abiotic stresses.
PMID:31900112
Phosphatidylinositol Monophosphates Regulate Optimal Vav1 Signaling Output.
PMID:31888228
Genome-wide identification, phylogeny, and expression analysis of the SBP-box gene family in Euphorbiaceae.
PMID:31874634
Evaluation of antibody responses to the early transcribed membrane protein family in Plasmodium vivax.
PMID:31856917
Evolutionary conservation of the intrinsic disorder-based Radical-Induced Cell Death1 hub interactome.
PMID:31831797
High-throughput custom capture sequencing identifies novel mutations in coloboma-associated genes: Mutation in DNA-binding domain of retinoic acid receptor beta affects nuclear localization causing ocular coloboma.
PMID:31816153
The Indispensable Role of Histone Methyltransferase PoDot1 in Extracellular Glycoside Hydrolase Biosynthesis of Penicillium oxalicum.
PMID:31787956
Phylogeny-wide conservation and change in developmental expression, cell-type specificity and functional domains of the transcriptional regulators of social amoebas.
PMID:31752673
The ABA-induced soybean ERF transcription factor gene GmERF75 plays a role in enhancing osmotic stress tolerance in Arabidopsis and soybean.
PMID:31747904
Genome-wide identification and characterization of heat shock protein family 70 provides insight into its divergent functions on immune response and development of Paralichthys olivaceus.
PMID:31737440
Epigenetic reader complexes of the human malaria parasite, Plasmodium falciparum.
PMID:31728527
Molecular cloning of Gibel carp (Carassius auratus gibelio) complement component C3 and its expression profile after Cyprinid herpesvirus 2 infection.
PMID:31723065
Expansion of LINEs and species-specific DNA repeats drives genome expansion in Asian Gypsy Moths.
PMID:31712581
Further Elucidation of the Argonaute and Dicer Protein Families in the Model Grass Species Brachypodium distachyon.
PMID:31708948
The subcellular localization of bHLH transcription factor TCF4 is mediated by multiple nuclear localization and nuclear export signals.
PMID:31666615
Cyclic di-GMP-Mediated Regulation of Gene Transfer and Motility in Rhodobacter capsulatus.
PMID:31659012
Structural and ligand binding analyses of the periplasmic sensor domain of RsbU in Chlamydia trachomatis support a role in TCA cycle regulation.
PMID:31637787
The C-Terminal Domains SnRK2 Box and ABA Box Have a Role in Sugarcane SnRK2s Auto-Activation and Activity.
PMID:31620147
BCrystal: an interpretable sequence-based protein crystallization predictor.
PMID:31603511
Two novel proteins, TtpB2 and TtpD2, are essential for iron transport in the TonB2 system of Vibrio vulnificus.
PMID:31595707
Identification of guanine nucleotide exchange factors that increase Cdc42 activity in primary human endothelial cells.
PMID:31469028
Normal transcription of cellulolytic enzyme genes relies on the balance between the methylation of H3K36 and H3K4 in Penicillium oxalicum.
PMID:31452679
RON2, a novel gene in Babesia bigemina, contains conserved, immunodominant B-cell epitopes that induce antibodies that block merozoite invasion.
PMID:31452491
Cyanobacteria Respond to Low Levels of Ethylene.
PMID:31417582
Role of a patatin-like phospholipase in Plasmodium falciparum gametogenesis and malaria transmission.
PMID:31413195
Greenlip Abalone (Haliotis laevigata) Genome and Protein Analysis Provides Insights into Maturation and Spawning.
PMID:31413154
Apical polarity proteins recruit the RhoGEF Cysts to promote junctional myosin assembly.
PMID:31409654
Transposon Mutagenesis in Chlamydia trachomatis Identifies CT339 as a ComEC Homolog Important for DNA Uptake and Lateral Gene Transfer.
PMID:31387908
Unraveling the structural landscape of intra-chain domain interfaces: Implication in the evolution of domain-domain interactions.
PMID:31374091
Transsynaptic Fish-lips signaling prevents misconnections between nonsynaptic partner olfactory neurons.
PMID:31341080
The multi PAM2 protein Upa2 functions as novel core component of endosomal mRNA transport.
PMID:31338952
Intrinsically disordered domains: Sequence ➔ disorder ➔ function relationships.
PMID:31299122
Interactome Analysis and Docking Sites of MutS Homologs Reveal New Physiological Roles in Arabidopsis thaliana.
PMID:31288414
Rice susceptibility to root-knot nematodes is enhanced by the Meloidogyne incognita MSP18 effector gene.
PMID:31218413
Zscan5b Deficiency Impairs DNA Damage Response and Causes Chromosomal Aberrations during Mitosis.
PMID:31155506
Modeling the Tertiary Structure of the Rift Valley Fever Virus L Protein.
PMID:31067727
Neofunctionalization of Mitochondrial Proteins and Incorporation into Signaling Networks in Plants.
PMID:30938771
Prediction and expression analysis of G protein-coupled receptors in the laboratory stick insect, Carausius morosus.
PMID:30930638
Angiosperm-Wide and Family-Level Analyses of AP2/ERF Genes Reveal Differential Retention and Sequence Divergence After Whole-Genome Duplication.
PMID:30863419
UDP-glycosyltransferase genes and their association and mutations associated with pyrethroid resistance in Anopheles sinensis (Diptera: Culicidae).
PMID:30845961
Halloween genes in panarthropods and the evolution of the early moulting pathway in Ecdysozoa.
PMID:30839709
An alkaline active feruloyl-CoA synthetase from soil metagenome as a potential key enzyme for lignin valorization strategies.
PMID:30802241
Genome organisation and comparative genomics of four novel Wolbachia genome assemblies from Indian Drosophila host.
PMID:30798391
The Importance of Conserved Serine for C-Terminally Encoded Peptides Function Exertion in Apple.
PMID:30759748
Myosin Va interacts with the exosomal protein spermine synthase.
PMID:30733278
"Dorsal-Ventral" Genes Are Part of an Ancient Axial Patterning System: Evidence from Trichoplax adhaerens (Placozoa).
PMID:30726986
Emerging Themes in PDZ Domain Signaling: Structure, Function, and Inhibition.
PMID:30712672
Robo2 contains a cryptic binding site for neural EGFL-like (NELL) protein 1/2.
PMID:30700556
Integrated transcriptomic and proteomic analyses of a molecular mechanism of radular teeth biomineralization in Cryptochiton stelleri.
PMID:30696920
The adaptor protein Ste50 directly modulates yeast MAPK signaling specificity through differential connections of its RA domain.
PMID:30650049
Characterization of B-BOX gene family and their expression profiles under hormonal, abiotic and metal stresses in Poaceae plants.
PMID:30626335
Orphan Hybrid Histidine Protein Kinase SinK Acts as a Signal Integrator To Fine-Tune Multicellular Behavior in Myxococcus xanthus.
PMID:30617244
Wild bees and their nests host Paenibacillus bacteria with functional potential of avail.
PMID:30579360
Transducer-Like Protein in Campylobacter jejuni With a Role in Mediating Chemotaxis to Iron and Phosphate.
PMID:30505293
Nicotine-sensitive acetylcholine receptors are relevant pharmacological targets for the control of multidrug resistant parasitic nematodes.
PMID:30502120
Mutations in Kinesin family member 6 reveal specific role in ependymal cell ciliogenesis and human neurological development.
PMID:30475797
Co-evolution of spliceosomal disassembly interologs: crowning J-protein component with moonlighting RNA-binding activity.
PMID:30467716
Combining bioinformatics, cheminformatics, functional genomics and whole organism approaches for identifying epigenetic drug targets in Schistosoma mansoni.
PMID:30455056
Comparative genome-wide analysis of WRKY transcription factors in two Asian legume crops: Adzuki bean and Mung bean.
PMID:30451872
Ubiquilin 2 modulates ALS/FTD-linked FUS-RNA complex dynamics and stress granule formation.
PMID:30442662
Epidermal Remodeling in Caenorhabditis elegans Dauers Requires the Nidogen Domain Protein DEX-1.
PMID:30409788
Two Mutations Commonly Associated with Daptomycin Resistance in Enterococcus faecium LiaST120A and LiaRW73C Appear To Function Epistatically in LiaFSR Signaling.
PMID:30403130
Aequatus: an open-source homology browser.
PMID:30395211
Babesia bovis RON2 contains conserved B-cell epitopes that induce an invasion-blocking humoral immune response in immunized cattle.
PMID:30390674
Species-Wide Variation in Shoot Nitrate Concentration, and Genetic Loci Controlling Nitrate, Phosphorus and Potassium Accumulation in Brassica napus L.
PMID:30386356
Differences in Small Molecule Neurotransmitter Profiles From the Crown-of-Thorns Seastar Radial Nerve Revealed Between Sexes and Following Food-Deprivation.
PMID:30374327
Dissecting the functional domains of the Arabidopsis thaliana nonhost resistance 2B (AtNHR2B) protein.
PMID:30325257
In silico characterization of the global Geobacillus and Parageobacillus secretome.
PMID:30285747
Genome-Wide Identification, Characterization, and Expression Profiling of the Legume BZR Transcription Factor Gene Family.
PMID:30283468
Disruption of Autographa Californica Multiple Nucleopolyhedrovirus ac111 Results in Reduced per os Infectivity in a Host-Dependent Manner.
PMID:30262719
Characterization of zebrafish (Danio rerio) muscle ankyrin repeat proteins reveals their conserved response to endurance exercise.
PMID:30252882
Diversity and Evolution of Sensor Histidine Kinases in Eukaryotes.
PMID:30252070
Exploring transcription factors reveals crucial members and regulatory networks involved in different abiotic stresses in Brassica napus L.
PMID:30231862
Immediate-Early Promoter-Driven Transgenic Reporter System for Neuroethological Research in a Hemimetabolous Insect.
PMID:30225346
Genome-wide identification of MADS-box family genes in moso bamboo (Phyllostachys edulis) and a functional analysis of PeMADS5 in flowering.
PMID:30176795
A seven-helix protein constitutes stress granules crucial for regulating translation during human-to-mosquito transmission of Plasmodium falciparum.
PMID:30133543
Tomato MYB49 enhances resistance to Phytophthora infestans and tolerance to water deficit and salt stress.
PMID:30132153
The myosin light-chain kinase MLCK-1 relocalizes during Caenorhabditis elegans ovulation to promote actomyosin bundle assembly and drive contraction.
PMID:30088798
Pan-Cancer Analysis Reveals the Functional Importance of Protein Lysine Modification in Cancer Development.
PMID:30065750
The Globodera pallida SPRYSEC Effector GpSPRY-414-2 That Suppresses Plant Defenses Targets a Regulatory Component of the Dynamic Microtubule Network.
PMID:30050557
Anionic Phospholipids Bind to and Modulate the Activity of Human TRESK Background K+ Channel.
PMID:30039335
Lateral Gene Transfer Between Protozoa-Related Giant Viruses of Family Mimiviridae and Chlamydiae.
PMID:30038484
Ligand-Mediated Biofilm Formation via Enhanced Physical Interaction between a Diguanylate Cyclase and Its Receptor.
PMID:29991582
Sequences of Circadian Clock Proteins in the Nudibranch Molluscs Hermissenda crassicornis, Melibe leonina, and Tritonia diomedea.
PMID:29949437
Costimulatory Function of Cd58/Cd2 Interaction in Adaptive Humoral Immunity in a Zebrafish Model.
PMID:29904386
Multiple sequences orchestrate subcellular trafficking of neuronal PAS domain-containing protein 4 (NPAS4).
PMID:29899116
POGZ Is Required for Silencing Mouse Embryonic β-like Hemoglobin and Human Fetal Hemoglobin Expression.
PMID:29898395
DEPTOR at the Nexus of Cancer, Metabolism, and Immunity.
PMID:29897294
Unique function words characterize genomic proteins.
PMID:29895692
Genomic Insight into Symbiosis-Induced Insect Color Change by a Facultative Bacterial Endosymbiont, "Candidatus Rickettsiella viridis".
PMID:29895637
TRIM14 promotes chemoresistance in gliomas by activating Wnt/β-catenin signaling via stabilizing Dvl2.
PMID:29867201
Genome-Wide Identification and Expression Analysis of the UGlcAE Gene Family in Tomato.
PMID:29861481
Origin, evolution, and divergence of plant class C GH9 endoglucanases.
PMID:29848310
The conserved RNA recognition motif and C3H1 domain of the Not4 ubiquitin ligase regulate in vivo ligase function.
PMID:29802328
Identification on mitogen-activated protein kinase signaling cascades by integrating protein interaction with transcriptional profiling analysis in cotton.
PMID:29802301
The Aspergillus nidulans Pyruvate Dehydrogenase Kinases Are Essential To Integrate Carbon Source Metabolism.
PMID:29794164
New genomic data and analyses challenge the traditional vision of animal epithelium evolution.
PMID:29793430
Phylogenetic relationships, stage-specific expression and localisation of a unique family of inactive cysteine proteases in Sarcoptes scabiei.
PMID:29769145
Comparative in Silico Analysis of Ferric Reduction Oxidase (FRO) Genes Expression Patterns in Response to Abiotic Stresses, Metal and Hormone Applications.
PMID:29757203
Integration of two RAB5 groups during endosomal transport in plants.
PMID:29749929
Characterization and Alternative Splicing Profiles of the Lipoxygenase Gene Family in Tea Plant (Camellia sinensis).
PMID:29726968
Deciphering the molecular determinants of cholinergic anthelmintic sensitivity in nematodes: When novel functional validation approaches highlight major differences between the model Caenorhabditis elegans and parasitic species.
PMID:29719008
An effector from the Huanglongbing-associated pathogen targets citrus proteases.
PMID:29712915
The bromodomain-containing protein Ibd1 links multiple chromatin-related protein complexes to highly expressed genes in Tetrahymena thermophila.
PMID:29523178
Alignment-free clustering of large data sets of unannotated protein conserved regions using minhashing.
PMID:29506470
Surfaceome and Proteosurfaceome in Parietal Monoderm Bacteria: Focus on Protein Cell-Surface Display.
PMID:29491848
Identification of multiple isomeric core chitobiose-modified high-mannose and paucimannose N-glycans in the planarian Schmidtea mediterranea.
PMID:29475940
Single-molecule imaging reveals dynamic biphasic partition of RNA-binding proteins in stress granules.
PMID:29463567
Reconstruction of the sialylation pathway in the ancestor of eukaryotes.
PMID:29440651
Identification of basic/helix-loop-helix transcription factors reveals candidate genes involved in anthocyanin biosynthesis from the strawberry white-flesh mutant.
PMID:29426907
CPAP3 proteins in the mineralized cuticle of a decapod crustacean.
PMID:29403068
Peach RNA viromes in six different peach cultivars.
PMID:29382911
Multiple Roots of Fruiting Body Formation in Amoebozoa.
PMID:29378020
Tomato Apical Leaf Curl Virus: A Novel, Monopartite Geminivirus Detected in Tomatoes in Argentina.
PMID:29375528
Identification of the Autochaperone Domain in the Type Va Secretion System (T5aSS): Prevalent Feature of Autotransporters with a β-Helical Passenger.
PMID:29375499
The Ancient Link between G-Protein-Coupled Receptors and C-Terminal Phospholipid Kinase Domains.
PMID:29362235
Discovery of Culex pipiens associated tunisia virus: a new ssRNA(+) virus representing a new insect associated virus family.
PMID:29340209
Novel Two-Component System of Streptococcus sanguinis Affecting Functions Associated with Viability in Saliva and Biofilm Formation.
PMID:29339459
Insights into metabolic osmoadaptation of the ectoines-producer bacterium Chromohalobacter salexigens through a high-quality genome scale metabolic model.
PMID:29316921
Sensor kinase KinB and its pathway-associated key factors sense the signal of nutrition starvation in sporulation of Bacillus subtilis.
PMID:29314743
Oligomeric states in sodium ion-dependent regulation of cyanobacterial histidine kinase-2.
PMID:29290041
Coordinated regulation of intracellular pH by two glucose-sensing pathways in yeast.
PMID:29284676
Missense Variants in RHOBTB2 Cause a Developmental and Epileptic Encephalopathy in Humans, and Altered Levels Cause Neurological Defects in Drosophila.
PMID:29276004
A hybrid-hierarchical genome assembly strategy to sequence the invasive golden mussel, Limnoperna fortunei.
PMID:29267857
Structures of the L27 Domain of Disc Large Homologue 1 Protein Illustrate a Self-Assembly Module.
PMID:29261291
Long disordered regions of the C-terminal domain of Abelson tyrosine kinase have specific and additive functions in regulation and axon localization.
PMID:29232713
Characterization of Two Cryptic Plasmids Isolated in Haiti from Clinical Vibrio cholerae Non-O1/Non-O139.
PMID:29218035
Interactome Mapping Uncovers a General Role for Numb in Protein Kinase Regulation.
PMID:29217616
Genome-wide analysis of the Brachypodium distachyon (L.) P. Beauv. Hsp90 gene family reveals molecular evolution and expression profiling under drought and salt stresses.
PMID:29216330
Draft genome sequence of Venturia carpophila, the causal agent of peach scab.
PMID:29213355
Comparative analysis of double-stranded RNA degradation and processing in insects.
PMID:29213068
Identification and analysis of seven effector protein families with different adaptive and evolutionary histories in plant-associated members of the Xanthomonadaceae.
PMID:29170530
Clarinet (CLA-1), a novel active zone protein required for synaptic vesicle clustering and release.
PMID:29160205
Identification of an Evolutionarily Conserved Ankyrin Domain-Containing Protein, Caiap, Which Regulates Inflammasome-Dependent Resistance to Bacterial Infection.
PMID:29123523
Cellular, ultrastructural and molecular analyses of epidermal cell development in the planarian Schmidtea mediterranea.
PMID:29100657
The flipflop orphan genes are required for limb bud eversion in the Tribolium embryo.
PMID:29075305
20 years of the SMART protein domain annotation resource.
PMID:29040681
Trichoplax adhaerens reveals a network of nuclear receptors sensitive to 9-cis-retinoic acid at the base of metazoan evolution.
PMID:28975052
High rate of adaptation of mammalian proteins that interact with Plasmodium and related parasites.
PMID:28957326
Host modification of a bacterial quorum-sensing signal induces a phenotypic switch in bacterial symbionts.
PMID:28923926
Alterations of c-di-GMP turnover proteins modulate semi-constitutive rdar biofilm formation in commensal and uropathogenic Escherichia coli.
PMID:28913868
Extracellular SalB Contributes to Intrinsic Cephalosporin Resistance and Cell Envelope Integrity in Enterococcus faecalis.
PMID:28874409
Genome-wide analysis and expression profiling of zinc finger homeodomain (ZHD) family genes reveal likely roles in organ development and stress responses in tomato.
PMID:28874115
Comparative molecular analyses of select pH- and osmoregulatory genes in three freshwater crayfish Cherax quadricarinatus, C. destructor and C. cainii.
PMID:28852583
Deconstruction of the beaten Path-Sidestep interaction network provides insights into neuromuscular system development.
PMID:28829740
Neodiversification of homeologous CLAVATA1-like receptor kinase genes in soybean leads to distinct developmental outcomes.
PMID:28827708
Genome-wide identification and expression analysis of E2 ubiquitin-conjugating enzymes in tomato.
PMID:28819320
Short versus long double-stranded RNA activation of a post-transcriptional gene knockdown pathway.
PMID:28816598
Genome-wide analysis of basic helix-loop-helix (bHLH) transcription factors in Brachypodium distachyon.
PMID:28810832
Bpifcl modulates kiss2 expression under the influence of 11-ketotestosterone in female zebrafish.
PMID:28801581
Molecular characterization of EcCIPK24 gene of finger millet (Eleusine coracana) for investigating its regulatory role in calcium transport.
PMID:28794922
An atypical strictosidine synthase, OsSTRL2, plays key roles in anther development and pollen wall formation in rice.
PMID:28761138
Structural and SAXS analysis of Tle5-Tli5 complex reveals a novel inhibition mechanism of H2-T6SS in Pseudomonas aeruginosa.
PMID:28758353
Multiomics analysis of the giant triton snail salivary gland, a crown-of-thorns starfish predator.
PMID:28729681
Early evolution of radial glial cells in Bilateria.
PMID:28724733
Annotated Draft Genome Assemblies for the Northern Bobwhite (Colinus virginianus) and the Scaled Quail (Callipepla squamata) Reveal Disparate Estimates of Modern Genome Diversity and Historic Effective Population Size.
PMID:28717047
The Ligand Binding Landscape of Diacylglycerol Kinases.
PMID:28712745
Salivary gland transcripts of the kissing bug, Panstrongylus chinai, a vector of Chagas disease.
PMID:28690145
Genome-wide characterization of the aldehyde dehydrogenase gene superfamily in soybean and its potential role in drought stress response.
PMID:28687067
Biomolecular changes that occur in the antennal gland of the giant freshwater prawn (Machrobrachium rosenbergii).
PMID:28662025
A Nutrient-Regulated Cyclic Diguanylate Phosphodiesterase Controls Clostridium difficile Biofilm and Toxin Production during Stationary Phase.
PMID:28652311
SAF-A Regulates Interphase Chromosome Structure through Oligomerization with Chromatin-Associated RNAs.
PMID:28622508
Red Blood Cell Invasion by the Malaria Parasite Is Coordinated by the PfAP2-I Transcription Factor.
PMID:28618269
Plasmobase: a comparative database of predicted domain architectures for Plasmodium genomes.
PMID:28592293
Iterative Sequencing and Variant Screening (ISVS) as a novel pathogenic mutations search strategy - application for TMPRSS3 mutations screen.
PMID:28566687
A dual-strategy expression screen for candidate connectivity labels in the developing thalamus.
PMID:28558017
Mutual Regulation of NOD2 and RIG-I in Zebrafish Provides Insights into the Coordination between Innate Antibacterial and Antiviral Signaling Pathways.
PMID:28555019
Rapidly Evolving Toll-3/4 Genes Encode Male-Specific Toll-Like Receptors in Drosophila.
PMID:28541576
Naturally acquired humoral and cellular immune responses to Plasmodium vivax merozoite surface protein 8 in patients with P. vivax infection.
PMID:28532483
Comparative Analysis of Immune Checkpoint Molecules and Their Potential Role in the Transmissible Tasmanian Devil Facial Tumor Disease.
PMID:28515726
RNAi-Mediated Reverse Genetic Screen Identified Drosophila Chaperones Regulating Eye and Neuromuscular Junction Morphology.
PMID:28500055
Expression analysis of genes encoding double B-box zinc finger proteins in maize.
PMID:28480497
An Insight Into Structure, Function, and Expression Analysis of 3-Hydroxy-3-Methylglutaryl-CoA Reductase of Cymbopogon winterianus.
PMID:28469419
PHRED-1 is a divergent neurexin-1 homolog that organizes muscle fibers and patterns organs during regeneration.
PMID:28461239
Dual regulation of water retention and cell growth by a stress-associated protein (SAP) gene in Prunus.
PMID:28336950
Identification of an RNA Polymerase III Regulator Linked to Disease-Associated Protein Aggregation.
PMID:28306505
Partial dispensability of Djp1's J domain in peroxisomal protein import in Saccharomyces cerevisiae results from genetic redundancy with another class II J protein, Caj1.
PMID:28261750
Comparative analyses of glycerotoxin expression unveil a novel structural organization of the bloodworm venom system.
PMID:28259138
Planar Cell Polarity Effector Fritz Interacts with Dishevelled and Has Multiple Functions in Regulating PCP.
PMID:28258110
TorsinA controls TAN line assembly and the retrograde flow of dorsal perinuclear actin cables during rearward nuclear movement.
PMID:28242745
Analyses of pea necrotic yellow dwarf virus-encoded proteins.
PMID:28238159
Cell Wall Remodeling in Abscission Zone Cells during Ethylene-Promoted Fruit Abscission in Citrus.
PMID:28228766
ANLN truncation causes a familial fatal acute respiratory distress syndrome in Dalmatian dogs.
PMID:28222102
Clinical diversity caused by novel IGHMBP2 variants.
PMID:28202949
A novel point mutation in RpoB improves osmotolerance and succinic acid production in Escherichia coli.
PMID:28193207
The essential role of guinea pig cytomegalovirus (GPCMV) IE1 and IE2 homologs in viral replication and IE1-mediated ND10 targeting.
PMID:28189970
Genome-wide exonic small interference RNA-mediated gene silencing regulates sexual reproduction in the homothallic fungus Fusarium graminearum.
PMID:28146558
Phosphatidylserine synthase 2 and phosphatidylserine decarboxylase are essential for aminophospholipid synthesis in Trypanosoma brucei.
PMID:28142188
Multivalency in Rab effector interactions.
PMID:28129037
Regulators of Lysosome Function and Dynamics in Caenorhabditis elegans.
PMID:28122949
Molecular Cloning and Characterization of a P38-Like Mitogen-Activated Protein Kinase from Echinococcus granulosus.
PMID:28095661
GExplore 1.4: An expanded web interface for queries on Caenorhabditis elegans protein and gene function.
PMID:28090394
Evolution of the angiopoietin-like gene family in teleosts and their role in skin regeneration.
PMID:28086749
OsSGL, a Novel DUF1645 Domain-Containing Protein, Confers Enhanced Drought Tolerance in Transgenic Rice and Arabidopsis.
PMID:28083013
BTB-BACK Domain Protein POB1 Suppresses Immune Cell Death by Targeting Ubiquitin E3 ligase PUB17 for Degradation.
PMID:28056034
Genome analysis of Hibiscus syriacus provides insights of polyploidization and indeterminate flowering in woody plants.
PMID:28011721
Cloning of the GABAB Receptor Subunits B1 and B2 and their Expression in the Central Nervous System of the Adult Sea Lamprey.
PMID:28008311
The accommodation index measures the perturbation associated with insertions and deletions in coiled-coils: Application to understand signaling in histidine kinases.
PMID:27977891
HtrA-mediated E-cadherin cleavage is limited to DegP and DegQ homologs expressed by gram-negative pathogens.
PMID:27931258
Verticillium dahliae LysM effectors differentially contribute to virulence on plant hosts.
PMID:27911046
Discovery of methylfarnesoate as the annelid brain hormone reveals an ancient role of sesquiterpenoids in reproduction.
PMID:27894418
xHMMER3x2: Utilizing HMMER3's speed and HMMER2's sensitivity and specificity in the glocal alignment mode for improved large-scale protein domain annotation.
PMID:27894340
Two Membrane-Anchored Aspartic Proteases Contribute to Pollen and Ovule Development.
PMID:27872247
Mitochondrial Genome Sequences and Structures Aid in the Resolution of Piroplasmida phylogeny.
PMID:27832128
Insights into the innate immunome of actiniarians using a comparative genomic approach.
PMID:27806695
Expanding the archaellum regulatory network - the eukaryotic protein kinases ArnC and ArnD influence motility of Sulfolobus acidocaldarius.
PMID:27771939
Solution NMR structure of the HLTF HIRAN domain: a conserved module in SWI2/SNF2 DNA damage tolerance proteins.
PMID:27771863
Shedding light on the expansion and diversification of the Cdc48 protein family during the rise of the eukaryotic cell.
PMID:27756227
Insights from the Shell Proteome: Biomineralization to Adaptation.
PMID:27744410
circRNADb: A comprehensive database for human circular RNAs with protein-coding annotations.
PMID:27725737
Genome Sequencing of the Pyruvate-producing Strain Candida glabrata CCTCC M202019 and Genomic Comparison with Strain CBS138.
PMID:27713500
The transcription factor Ets21C drives tumor growth by cooperating with AP-1.
PMID:27713480
Neofunctionalization of zona pellucida proteins enhances freeze-prevention in the eggs of Antarctic notothenioids.
PMID:27698404
Characterization of Pv92, a Novel Merozoite Surface Protein of Plasmodium vivax.
PMID:27658588
The Phosphotransfer Protein CD1492 Represses Sporulation Initiation in Clostridium difficile.
PMID:27647869
MLL3/MLL4/COMPASS Family on Epigenetic Regulation of Enhancer Function and Cancer.
PMID:27638352
Secretory COPII Protein SEC31B Is Required for Pollen Wall Development.
PMID:27634427
Genome-wide identification and analysis of JHBP-domain family members in the silkworm Bombyx mori.
PMID:27631967
Cloning, Purification and Characterization of the Collagenase ColA Expressed by Bacillus cereus ATCC 14579.
PMID:27588686
Structure of the C-Terminal Helical Repeat Domain of Eukaryotic Elongation Factor 2 Kinase.
PMID:27571275
Glycosylphosphatidylinositol (GPI) Modification Serves as a Primary Plasmodesmal Sorting Signal.
PMID:27559035
A Fast Alignment-Free Approach for De Novo Detection of Protein Conserved Regions.
PMID:27552220
bMERB domains are bivalent Rab8 family effectors evolved by gene duplication.
PMID:27552051
Adaptive evolution of virus-sensing toll-like receptor 8 in bats.
PMID:27502317
Functional characterization of the Aspergillus nidulans glucosylceramide pathway reveals that LCB Δ8-desaturation and C9-methylation are relevant to filamentous growth, lipid raft localization and Psd1 defensin activity.
PMID:27479571
Glutathione Transferases Superfamily: Cold-Inducible Expression of Distinct GST Genes in Brassica oleracea.
PMID:27472324
Population Genomics of Reduced Vancomycin Susceptibility in Staphylococcus aureus.
PMID:27446992
Conserved expression of vertebrate microvillar gene homologs in choanocytes of freshwater sponges.
PMID:27413529
Identification, Functional Characterization and Regulon Prediction of a Novel Two Component System Comprising BAS0540-BAS0541 of Bacillus anthracis.
PMID:27392063
Phytohormone sensing in the biotrophic fungus Ustilago maydis - the dual role of the transcription factor Rss1.
PMID:27387604
Genome-scale DNA variant analysis and functional validation of a SNP underlying yellow fruit color in wild strawberry.
PMID:27377763
Further insight into BRUTUS domain composition and functionality.
PMID:27359166
The multicellularity genes of dictyostelid social amoebas.
PMID:27357338
Effects of salinity acclimation and eyestalk ablation on Na(+), K(+), 2Cl(-) cotransporter gene expression in the gill of Portunus trituberculatus:a molecular correlate for salt-tolerant trait.
PMID:27278804
Identification of the Q969R gain-of-function polymorphism in the gene encoding porcine NLRP3 and its distribution in pigs of Asian and European origin.
PMID:27236661
Identification and Expression Profile of Two Putative Odorant-Binding Proteins from the Neotropical Brown Stink Bug, Euschistus heros (Fabricius) (Hemiptera: Pentatomidae).
PMID:27193516
Genome-wide identification and comparative analysis of the cation proton antiporters family in pear and four other Rosaceae species.
PMID:27193473
Parallel Evolution in Streptococcus pneumoniae Biofilms.
PMID:27190203
Genome sequence and comparative analysis of clavicipitaceous insect-pathogenic fungus Aschersonia badia with Metarhizium spp.
PMID:27189621
Molecular evolution of WDR62, a gene that regulates neocorticogenesis.
PMID:27114917
PilZ Domain Protein FlgZ Mediates Cyclic Di-GMP-Dependent Swarming Motility Control in Pseudomonas aeruginosa.
PMID:27114465
Sequencing and characterization of leaf transcriptomes of six diploid Nicotiana species.
PMID:27096138
Amino Acid Substitutions of CrrB Responsible for Resistance to Colistin through CrrC in Klebsiella pneumoniae.
PMID:27067316
FAM46 proteins are novel eukaryotic non-canonical poly(A) polymerases.
PMID:27060136
Deacetylation of Fungal Exopolysaccharide Mediates Adhesion and Biofilm Formation.
PMID:27048799
Live and inactivated Salmonella enterica serovar Typhimurium stimulate similar but distinct transcriptome profiles in bovine macrophages and dendritic cells.
PMID:27000047
Regulation by the quorum sensor from Vibrio indicates a receptor function for the membrane anchors of adenylate cyclases.
PMID:26920221
Corrigendum: Can the Natural Diversity of Quorum-Sensing Advance Synthetic Biology?
PMID:26913281
Comparative Analysis of Salivary Gland Proteomes of Two Glossina Species that Exhibit Differential Hytrosavirus Pathologies.
PMID:26903969
Chemoproteomic profiling of host and pathogen enzymes active in cholera.
PMID:26900865
Molecular and Functional Characterization of FLOWERING LOCUS T Homologs in Allium cepa.
PMID:26891287
The archaeal Ced system imports DNA.
PMID:26884154
Distinct lymphocyte antigens 6 (Ly6) family members Ly6D, Ly6E, Ly6K and Ly6H drive tumorigenesis and clinical outcome.
PMID:26862846
Overexpression of the NDR1/HIN1-Like Gene NHL6 Modifies Seed Germination in Response to Abscisic Acid and Abiotic Stresses in Arabidopsis.
PMID:26849212
Novel origin of lamin-derived cytoplasmic intermediate filaments in tardigrades.
PMID:26840051
Deletion of exon 8 from the EXT1 gene causes multiple osteochondromas (MO) in a family with three affected members.
PMID:26839764
Three DUF1996 Proteins Localize in Vacuoles and Function in Fungal Responses to Multiple Stresses and Metal Ions.
PMID:26839279
Genome-wide analysis of CrRLK1L gene family in Gossypium and identification of candidate CrRLK1L genes related to fiber development.
PMID:26833484
The Matrix Proteins Hasp and Hig Exhibit Segregated Distribution within Synaptic Clefts and Play Distinct Roles in Synaptogenesis.
PMID:26758847
Use of a Probabilistic Motif Search to Identify Histidine Phosphotransfer Domain-Containing Proteins.
PMID:26751210
Evolution of an ancient protein function involved in organized multicellularity in animals.
PMID:26740169
ELF5 isoform expression is tissue-specific and significantly altered in cancer.
PMID:26738740
LmABCB3, an atypical mitochondrial ABC transporter essential for Leishmania major virulence, acts in heme and cytosolic iron/sulfur clusters biogenesis.
PMID:26728034
Whole Genome Shotgun Sequencing Shows Selection on Leptospira Regulatory Proteins During in vitro Culture Attenuation.
PMID:26711524
Phylogenetic analysis of human Chlamydia pneumoniae strains reveals a distinct Australian indigenous clade that predates European exploration of the continent.
PMID:26694618
Characterization of the Paracoccidioides Hypoxia Response Reveals New Insights into Pathogenesis Mechanisms of This Important Human Pathogenic Fungus.
PMID:26659387
An extracellular biochemical screen reveals that FLRTs and Unc5s mediate neuronal subtype recognition in the retina.
PMID:26633812
Functional Characterization of a Novel Class of Morantel-Sensitive Acetylcholine Receptors in Nematodes.
PMID:26625142
Identification of Immune Related LRR-Containing Genes in Maize (Zea mays L.) by Genome-Wide Sequence Analysis.
PMID:26609518
Eukaryotic Components Remodeled Chloroplast Nucleoid Organization during the Green Plant Evolution.
PMID:26608058
Ixodes scapularis dystroglycan-like protein promotes Borrelia burgdorferi migration from the gut.
PMID:26594018
Evolutionary Conservation and Diversification of Puf RNA Binding Proteins and Their mRNA Targets.
PMID:26587879
A magnetic protein biocompass.
PMID:26569474
Transcriptome analysis and characterisation of gill-expressed carbonic anhydrase and other key osmoregulatory genes in freshwater crayfish Cherax quadricarinatus.
PMID:26543880
Comparative genomic study of arachnid immune systems indicates loss of beta-1,3-glucanase-related proteins and the immune deficiency pathway.
PMID:26528622
Identification, Characterization, and Diel Pattern of Expression of Canonical Clock Genes in Nephrops norvegicus (Crustacea: Decapoda) Eyestalk.
PMID:26524198
Sequences analyses and expression profiles in tissues and embryos of Japanese flounder (Paralichthys olivaceus) PRDM1.
PMID:26508172
MAS C-Terminal Tail Interacting Proteins Identified by Mass Spectrometry- Based Proteomic Approach.
PMID:26484771
Carboxydotrophic growth of Geobacter sulfurreducens.
PMID:26481622
Establishment of Par-Polarized Cortical Domains via Phosphoregulated Membrane Motifs.
PMID:26481050
Evolution and Structural Analyses of Glossina morsitans (Diptera; Glossinidae) Tetraspanins.
PMID:26462947
Event inference in multidomain families with phylogenetic reconciliation.
PMID:26451642
Transmembrane START domain proteins: in silico identification, characterization and expression analysis under stress conditions in chickpea (Cicer arietinum L.).
PMID:26445326
Identification of 4CL Genes in Desert Poplars and Their Changes in Expression in Response to Salt Stress.
PMID:26393655
Functional characterization and molecular mechanism exploration of three granulin epithelin precursor splice variants in biomineralization of the pearl oyster Pinctada fucata.
PMID:26388260
Role of DetR in defence is critical for virulence of Xanthomonas oryzae pv. oryzae.
PMID:26315668
Phylogenetic Co-Occurrence of ExoR, ExoS, and ChvI, Components of the RSI Bacterial Invasion Switch, Suggests a Key Adaptive Mechanism Regulating the Transition between Free-Living and Host-Invading Phases in Rhizobiales.
PMID:26309130
Genome-wide identification and transcriptional analysis of folate metabolism-related genes in maize kernels.
PMID:26283542
Proteome analysis of shell matrix proteins in the brachiopod Laqueus rubellus.
PMID:26279640
New insights into the molecular mechanism of the Rab GTPase Sec4p activation.
PMID:26263895
The Evolution of the Secreted Regulatory Protein Progranulin.
PMID:26248158
The soybean R2R3 MYB transcription factor GmMYB100 negatively regulates plant flavonoid biosynthesis.
PMID:26231207
T cell development involves TRAF3IP3-mediated ERK signaling in the Golgi.
PMID:26195727
Binding of Cyclic Di-AMP to the Staphylococcus aureus Sensor Kinase KdpD Occurs via the Universal Stress Protein Domain and Downregulates the Expression of the Kdp Potassium Transporter.
PMID:26195599
Mapping of the Sequences Directing Localization of the Drosophila Germ Cell-Expressed Protein (GCE).
PMID:26186223
The Apis mellifera Filamentous Virus Genome.
PMID:26184284
Absence of catalytic domain in a putative protein kinase C (PkcA) suppresses tip dominance in Dictyostelium discoideum.
PMID:26183108
The extracellular matrix: Tools and insights for the "omics" era.
PMID:26163349
DNA Processing Proteins Involved in the UV-Induced Stress Response of Sulfolobales.
PMID:26148716
A mex3 homolog is required for differentiation during planarian stem cell lineage development.
PMID:26114597
Pseudomonas aeruginosa MifS-MifR Two-Component System Is Specific for α-Ketoglutarate Utilization.
PMID:26114434
Structure-Function Analysis of the Non-Muscle Myosin Light Chain Kinase (nmMLCK) Isoform by NMR Spectroscopy and Molecular Modeling: Influence of MYLK Variants.
PMID:26111161
Clinical and molecular features and therapeutic perspectives of spinal muscular atrophy with respiratory distress type 1.
PMID:26095024
Expression study of the hunchback ortholog in embryos of the onychophoran Euperipatoides rowelli.
PMID:26093940
Degradation of Human PDZ-Proteins by Human Alphapapillomaviruses Represents an Evolutionary Adaptation to a Novel Cellular Niche.
PMID:26086730
Maize EMBRYO SAC family peptides interact differentially with pollen tubes and fungal cells.
PMID:26071527
Structural Studies of the HIV-1 Integrase Protein: Compound Screening and Characterization of a DNA-Binding Inhibitor.
PMID:26046987
A novel chitin binding crayfish molar tooth protein with elasticity properties.
PMID:26010981
Csr1/Zap1 Maintains Zinc Homeostasis and Influences Virulence in Candida dubliniensis but Is Not Coupled to Morphogenesis.
PMID:26002718
Draft Genome Sequence of Pantoea anthophila Strain 11-2 from Hypersaline Lake Laysan, Hawaii.
PMID:25977417
Deep developmental transcriptome sequencing uncovers numerous new genes and enhances gene annotation in the sponge Amphimedon queenslandica.
PMID:25975661
The Minor Capsid Protein VP11 of Thermophilic Bacteriophage P23-77 Facilitates Virus Assembly by Using Lipid-Protein Interactions.
PMID:25972558
RNase HI Is Essential for Survival of Mycobacterium smegmatis.
PMID:25965344
Glutathione S-Transferase (GST) Gene Diversity in the Crustacean Calanus finmarchicus--Contributors to Cellular Detoxification.
PMID:25945801
Nitric Oxide Mediates Biofilm Formation and Symbiosis in Silicibacter sp. Strain TrichCH4B.
PMID:25944856
Variants in Nebulin (NEB) Are Linked to the Development of Familial Primary Angle Closure Glaucoma in Basset Hounds.
PMID:25938837
Cancer/Testis Antigen PASD1 Silences the Circadian Clock.
PMID:25936801
Co-expressed Cyclin D variants cooperate to regulate proliferation of germline nuclei in a syncytium.
PMID:25928155
A novel RNA binding surface of the TAM domain of TIP5/BAZ2A mediates epigenetic regulation of rRNA genes.
PMID:25916849
Identification and Characterization of a PRDM14 Homolog in Japanese Flounder (Paralichthys olivaceus).
PMID:25915026
The genomes of two key bumblebee species with primitive eusocial organization.
PMID:25908251
Giving structure to the biofilm matrix: an overview of individual strategies and emerging common themes.
PMID:25907113
The Psp system of Mycobacterium tuberculosis integrates envelope stress-sensing and envelope-preserving functions.
PMID:25899163
A conserved signalling pathway for amoebozoan encystation that was co-opted for multicellular development.
PMID:25881075
Hm-MyD88 and Hm-SARM: two key regulators of the neuroimmune system and neural repair in the medicinal leech.
PMID:25880897
Inhibiting the inflammasome: one domain at a time.
PMID:25879295
Genetic variability and evolutionary diversification of membrane ABC transporters in plants.
PMID:25850033
Redox-dependent chaperone/peroxidase function of 2-Cys-Prx from the cyanobacterium Anabaena PCC7120: role in oxidative stress tolerance.
PMID:25849452
BILBO1 is a scaffold protein of the flagellar pocket collar in the pathogen Trypanosoma brucei.
PMID:25822645
Role of Pex11p in Lipid Homeostasis in Yarrowia lipolytica.
PMID:25820522
Comparative analysis of wolbachia genomes reveals streamlining and divergence of minimalist two-component systems.
PMID:25809075
Comprehensive analysis of CCCH-type zinc finger family genes facilitates functional gene discovery and reflects recent allopolyploidization event in tetraploid switchgrass.
PMID:25765300
Genome sequence, comparative analysis, and evolutionary insights into chitinases of entomopathogenic fungus Hirsutella thompsonii.
PMID:25716828
The ferrous iron-responsive BqsRS two-component system activates genes that promote cationic stress tolerance.
PMID:25714721
KdmA, a histone H3 demethylase with bipartite function, differentially regulates primary and secondary metabolism in Aspergillus nidulans.
PMID:25712266
Genome-wide comparative analysis of ABC systems in the Bdellovibrio-and-like organisms.
PMID:25707746
In silico analysis for structure, function and T-cell epitopes of a hypothetical conserved (HP-C) protein coded by PVX_092425 in Plasmodium vivax.
PMID:25706099
Superdomains in the protein structure hierarchy: The case of PTP-C2.
PMID:25694109
Orientia tsutsugamushi ankyrin repeat-containing protein family members are Type 1 secretion system substrates that traffic to the host cell endoplasmic reticulum.
PMID:25692099
Discovery of novel S. aureus autolysins and molecular engineering to enhance bacteriolytic activity.
PMID:25690309
FMRFamide signaling promotes stress-induced sleep in Drosophila.
PMID:25668617
Dissecting the molecular properties of prokaryotic flotillins.
PMID:25635948
Novel pili-like surface structures of Halobacterium salinarum strain R1 are crucial for surface adhesion.
PMID:25628607
A biliverdin-binding cyanobacteriochrome from the chlorophyll d-bearing cyanobacterium Acaryochloris marina.
PMID:25609645
Actin-binding protein G (AbpG) participates in modulating the actin cytoskeleton and cell migration in Dictyostelium discoideum.
PMID:25609090
β-Spectrin regulates the hippo signaling pathway and modulates the basal actin network.
PMID:25589787
Lack of a type-2 glycosyltransferase in the fish pathogen Flavobacterium psychrophilum determines pleiotropic changes and loss of virulence.
PMID:25582708
Novel characteristics of a carbohydrate-binding module 20 from hyperthermophilic bacterium.
PMID:25575613
Two TIR-like domain containing proteins in a newly emerging zoonotic Staphylococcus aureus strain sequence type 398 are potential virulence factors by impacting on the host innate immune response.
PMID:25538689
Golgi-located NTPDase1 of Leishmania major is required for lipophosphoglycan elongation and normal lesion development whereas secreted NTPDase2 is dispensable for virulence.
PMID:25521752
Molecular modeling and computational analyses suggests that the Sinorhizobium meliloti periplasmic regulator protein ExoR adopts a superhelical fold and is controlled by a unique mechanism of proteolysis.
PMID:25492513
CHCHD2 inhibits apoptosis by interacting with Bcl-x L to regulate Bax activation.
PMID:25476776
A general computational approach for repeat protein design.
PMID:25451037
Determining microbial products and identifying molecular targets in the human microbiome.
PMID:25440055
Mycobacterium tuberculosis Serine/Threonine Protein Kinases.
PMID:25429354
Internal sense of direction: sensing and signaling from cytoplasmic chemoreceptors.
PMID:25428939
Genome-wide identification and analysis of basic helix-loop-helix domains in dog, Canis lupus familiaris.
PMID:25403511
Pre-metazoan origins and evolution of the cadherin adhesome.
PMID:25395670
A novel cytosolic NADH:quinone oxidoreductase from Methanothermobacter marburgensis.
PMID:25372605
Cyclic-di-GMP signalling and biofilm-related properties of the Shiga toxin-producing 2011 German outbreak Escherichia coli O104:H4.
PMID:25361688
Comparative genomics of the major fungal agents of human and animal Sporotrichosis: Sporothrix schenckii and Sporothrix brasiliensis.
PMID:25351875
Acanthamoeba castellanii STAT protein.
PMID:25338074
SMART: recent updates, new developments and status in 2015.
PMID:25300481
Kinesin family member 6 (kif6) is necessary for spine development in zebrafish.
PMID:25283277
Cyclic nucleotide-gated ion channel gene family in rice, identification, characterization and experimental analysis of expression response to plant hormones, biotic and abiotic stresses.
PMID:25280591
PERK-KIPK-KCBP signalling negatively regulates root growth in Arabidopsis thaliana.
PMID:25262228
The structure of a conserved piezo channel domain reveals a topologically distinct β sandwich fold.
PMID:25242456
Inhibition of the SR protein-phosphorylating CLK kinases of Plasmodium falciparum impairs blood stage replication and malaria transmission.
PMID:25188378
Overexpression of p49/STRAP alters cellular cytoskeletal structure and gross anatomy in mice.
PMID:25183317
Interplay between phosphorylation and palmitoylation mediates plasma membrane targeting and sorting of GAP43.
PMID:25165142
STATdb: a specialised resource for the STATome.
PMID:25157689
A sensory complex consisting of an ATP-binding cassette transporter and a two-component regulatory system controls bacitracin resistance in Bacillus subtilis.
PMID:25118291
The social amoeba Polysphondylium pallidum loses encystation and sporulation, but can still erect fruiting bodies in the absence of cellulose.
PMID:25113829
NAC transcription factor genes: genome-wide identification, phylogenetic, motif and cis-regulatory element analysis in pigeonpea (Cajanus cajan (L.) Millsp.).
PMID:25108674
A tick gut protein with fibronectin III domains aids Borrelia burgdorferi congregation to the gut during transmission.
PMID:25102051
Genome-wide comparative analysis of tonoplast intrinsic protein (TIP) genes in plants.
PMID:25095751
Gene loss rather than gene gain is associated with a host jump from monocots to dicots in the Smut Fungus Melanopsichium pennsylvanicum.
PMID:25062916
Characterization of the small exported Plasmodium falciparum membrane protein SEMP1.
PMID:25062022
A novel fibroblast growth factor receptor family member promotes neuronal outgrowth and synaptic plasticity in aplysia.
PMID:25059541
Identification of Giardia lamblia DHHC proteins and the role of protein S-palmitoylation in the encystation process.
PMID:25058047
A wheat aminocyclopropane-1-carboxylate oxidase gene, TaACO1, negatively regulates salinity stress in Arabidopsis thaliana.
PMID:25048023
The HtrA-like protease CD3284 modulates virulence of Clostridium difficile.
PMID:25047848
Sequence-based appraisal of the genes encoding neck and carbohydrate recognition domain of conglutinin in blackbuck (Antilope cervicapra) and goat (Capra hircus).
PMID:25028649
Protein interacting with C-kinase 1 (PICK1) binding promiscuity relies on unconventional PSD-95/discs-large/ZO-1 homology (PDZ) binding modes for nonclass II PDZ ligands.
PMID:25023278
Amoebozoa possess lineage-specific globin gene repertoires gained by individual horizontal gene transfers.
PMID:25013378
The molecular mechanism of eukaryotic elongation factor 2 kinase activation.
PMID:25012662
Downregulation of chicken interleukin-17 receptor A during Eimeria infection.
PMID:24980970
Mating behavior, male sensory cilia, and polycystins in Caenorhabditis elegans.
PMID:24977333
Functional analysis of novel alpha-1 antitrypsin variants G320R and V321F.
PMID:24969485
Genome-wide analysis of the NADK gene family in plants.
PMID:24968225
The B2 flowering time locus of beet encodes a zinc finger transcription factor.
PMID:24965366
Cloning, expression and characterization of UDP-N-acetylglucosamine enolpyruvyl transferase (MurA) from Wolbachia endosymbiont of human lymphatic filarial parasite Brugia malayi.
PMID:24941309
C-terminal region of MAP7 domain containing protein 3 (MAP7D3) promotes microtubule polymerization by binding at the C-terminal tail of tubulin.
PMID:24927501
Expression profiling of the wheat pathogen Zymoseptoria tritici reveals genomic patterns of transcription and host-specific regulatory programs.
PMID:24920004
New PARP targets for cancer therapy.
PMID:24898058
On the necessity of dissecting sequence similarity scores into segment-specific contributions for inferring protein homology, function prediction and annotation.
PMID:24890864
Patterns of variation at Ustilago maydis virulence clusters 2A and 19A largely reflect the demographic history of its populations.
PMID:24887029
Mesoniviruses are mosquito-specific viruses with extensive geographic distribution and host range.
PMID:24884700
Methylated glycans as conserved targets of animal and fungal innate defense.
PMID:24879441
Dimorphic ovary differentiation in honeybee (Apis mellifera) larvae involves caste-specific expression of homologs of ark and buffy cell death genes.
PMID:24844304
Analysis of the central nervous system transcriptome of the eastern rock lobster Sagmariasus verreauxi reveals its putative neuropeptidome.
PMID:24819537
Cloning and functional characterization of three branch point oxidosqualene cyclases from Withania somnifera (L.) dunal.
PMID:24770414
Two different rpf clusters distributed among a population of Stenotrophomonas maltophilia clinical strains display differential diffusible signal factor production and virulence regulation.
PMID:24769700
Phylogeny and oscillating expression of period and cryptochrome in short and long photoperiods suggest a conserved function in Nasonia vitripennis.
PMID:24758403
Global population structure and evolution of Bordetella pertussis and their relationship with vaccination.
PMID:24757216
RNA protein granules modulate tau isoform expression and induce neuronal sprouting.
PMID:24755223
A tobacco homolog of DCN1 is involved in pollen development and embryogenesis.
PMID:24748527
Solution NMR structure of the DNA-binding domain from Scml2 (sex comb on midleg-like 2).
PMID:24727478
α -Actinin TvACTN3 of Trichomonas vaginalis is an RNA-binding protein that could participate in its posttranscriptional iron regulatory mechanism.
PMID:24719864
Ankyrin domains across the Tree of Life.
PMID:24688847
Characterization of the caleosin gene family in the Triticeae.
PMID:24673767
Temperate Streptococcus thermophilus phages expressing superinfection exclusion proteins of the Ltp type.
PMID:24659988
Deletion mutant library for investigation of functional outputs of cyclic diguanylate metabolism in Pseudomonas aeruginosa PA14.
PMID:24657857
Suppression of plant defenses by a Myzus persicae (green peach aphid) salivary effector protein.
PMID:24654979
PmVRP15, a novel viral responsive protein from the black tiger shrimp, Penaeus monodon, promoted white spot syndrome virus replication.
PMID:24637711
Proteolytic processing of the extracellular scaffolding protein LEV-9 is required for clustering acetylcholine receptors.
PMID:24619422
Hsp90-dependent assembly of the DBC2/RhoBTB2-Cullin3 E3-ligase complex.
PMID:24608665
In silico characterization of an atypical MAPK phosphatase of Plasmodium falciparum as a suitable target for drug discovery.
PMID:24605883
Perforin-like protein PPLP2 permeabilizes the red blood cell membrane during egress of Plasmodium falciparum gametocytes.
PMID:24602217
A rhomboid protease gene deletion affects a novel oligosaccharide N-linked to the S-layer glycoprotein of Haloferax volcanii.
PMID:24596091
Sequence complexity of amyloidogenic regions in intrinsically disordered human proteins.
PMID:24594841
Domain shuffling in a sensor protein contributed to the evolution of insect pathogenicity in plant-beneficial Pseudomonas protegens.
PMID:24586167
Oligomerization-induced conformational change in the C-terminal region of Nel-like molecule 1 (NELL1) protein is necessary for the efficient mediation of murine MC3T3-E1 cell adhesion and spreading.
PMID:24563467
Function and localization dynamics of bifunctional penicillin-binding proteins in Caulobacter crescentus.
PMID:24532768
The CasKR two-component system is required for the growth of mesophilic and psychrotolerant Bacillus cereus strains at low temperatures.
PMID:24509924
Genome-wide analysis of the MADS-box gene family in Brachypodium distachyon.
PMID:24454749
Albinism-causing mutations in recombinant human tyrosinase alter intrinsic enzymatic activity.
PMID:24392141
Molecular characterization and expression analysis of Triticum aestivum squamosa-promoter binding protein-box genes involved in ear development.
PMID:24386921
Characterization of SLCO5A1/OATP5A1, a solute carrier transport protein with non-classical function.
PMID:24376674
Phosphate flow between hybrid histidine kinases CheA₃ and CheS₃ controls Rhodospirillum centenum cyst formation.
PMID:24367276
Comprehensive analysis of transcriptome variation uncovers known and novel driver events in T-cell acute lymphoblastic leukemia.
PMID:24367274
Spatial expression of transcription factors in Drosophila embryonic organ development.
PMID:24359758
Characterization of Spink6 in mouse skin: the conserved inhibitor of kallikrein-related peptidases is reduced by barrier injury.
PMID:24352040
Molecular cloning and expression of CYP9A61: a chlorpyrifos-ethyl and lambda-cyhalothrin-inducible cytochrome P450 cDNA from Cydia pomonella.
PMID:24351812
Gene duplication, lineage-specific expansion, and subfunctionalization in the MADF-BESS family patterns the Drosophila wing hinge.
PMID:24336749
Molecular strategies of the Caenorhabditis elegans dauer larva to survive extreme desiccation.
PMID:24324795
Unravelling the Neospora caninum secretome through the secreted fraction (ESA) and quantification of the discharged tachyzoite using high-resolution mass spectrometry-based proteomics.
PMID:24267406
Crystal structure of the pleckstrin homology domain from the ceramide transfer protein: implications for conformational change upon ligand binding.
PMID:24260258
Combinatory microarray and SuperSAGE analyses identify pairing-dependently transcribed genes in Schistosoma mansoni males, including follistatin.
PMID:24244773
Identification of a protein phosphatase-1/phospholamban complex that is regulated by cAMP-dependent phosphorylation.
PMID:24244723
Evolution of the cytosolic iron-sulfur cluster assembly machinery in Blastocystis species and other microbial eukaryotes.
PMID:24243793
A network of epigenetic regulators guides developmental haematopoiesis in vivo.
PMID:24240475
Autophosphorylation activity of a soluble hexameric histidine kinase correlates with the shift in protein conformational equilibrium.
PMID:24210218
Essential role of the E3 ubiquitin ligase nopperabo1 in schizogenous intercellular space formation in the liverwort Marchantia polymorpha.
PMID:24170128
Molecular analysis of the UV-inducible pili operon from Sulfolobus acidocaldarius.
PMID:24106028
Crystal structure of c5321: a protective antigen present in uropathogenic Escherichia coli strains displaying an SLR fold.
PMID:24099525
Structure of a bacterial putative acetyltransferase defines the fold of the human O-GlcNAcase C-terminal domain.
PMID:24088714
Structural and sequence similarities of hydra xeroderma pigmentosum A protein to human homolog suggest early evolution and conservation.
PMID:24083246
The clip-segment of the von Willebrand domain 1 of the BMP modulator protein Crossveinless 2 is preformed.
PMID:24071977
Automatic identification of highly conserved family regions and relationships in genome wide datasets including remote protein sequences.
PMID:24069417
NSD1 mitigates caspase-1 activation by listeriolysin O in macrophages.
PMID:24058709
Isolated foveal hypoplasia with secondary nystagmus and low vision is associated with a homozygous SLC38A8 mutation.
PMID:24045842
Comparative Analysis of two Component Signal Transduction Systems of the Lactobacillus Acidophilus Group.
PMID:24031616
Contrasted evolutionary histories of two Toll-like receptors (Tlr4 and Tlr7) in wild rodents (MURINAE).
PMID:24028551
CFTR activity and mitochondrial function.
PMID:24024153
Pepper osmotin-like protein 1 (CaOSM1) is an essential component for defense response, cell death, and oxidative burst in plants.
PMID:24022744
The Toxoplasma gondii kinetochore is required for centrosome association with the centrocone (spindle pole).
PMID:24015880
Adhesins of Leptospira interrogans mediate the interaction to fibrinogen and inhibit fibrin clot formation in vitro.
PMID:24009788
Molecular cloning and characterization of novel glutamate-gated chloride channel subunits from Schistosoma mansoni.
PMID:24009509
Drift and conservation of differential exon usage across tissues in primate species.
PMID:24003148
Anion translocation through an Slc26 transporter mediates lumen expansion during tubulogenesis.
PMID:23980138
The Drosophila selectin furrowed mediates intercellular planar cell polarity interactions via frizzled stabilization.
PMID:23973164
Association of jacalin-related lectins with wheat responses to stresses revealed by transcriptional profiling.
PMID:23959941
Systematic analysis and comparison of nucleotide-binding site disease resistance genes in a diploid cotton Gossypium raimondii.
PMID:23936305
The role of cyclase-associated protein in regulating actin filament dynamics - more than a monomer-sequestration factor.
PMID:23908377
New horizons for lipoprotein receptors: communication by β-propellers.
PMID:23881912
CMF22 is a broadly conserved axonemal protein and is required for propulsive motility in Trypanosoma brucei.
PMID:23851336
Genome-wide identification and expression profiling of ankyrin-repeat gene family in maize.
PMID:23839078
In silico analysis of the fucosylation-associated genome of the human blood fluke Schistosoma mansoni: cloning and characterization of the enzymes involved in GDP-L-fucose synthesis and Golgi import.
PMID:23835114
Evolutionary origins, molecular cloning and expression of carotenoid hydroxylases in eukaryotic photosynthetic algae.
PMID:23834441
Characterization of Farmington virus, a novel virus from birds that is distantly related to members of the family Rhabdoviridae.
PMID:23816310
A method for WD40 repeat detection and secondary structure prediction.
PMID:23776530
Niakha virus: a novel member of the family Rhabdoviridae isolated from phlebotomine sandflies in Senegal.
PMID:23773405
Molecular phylogeny, homology modeling, and molecular dynamics simulation of race-specific bacterial blight disease resistance protein (xa5) of rice: a comparative agriproteomics approach.
PMID:23758479
Classification and evolutionary analysis of the basic helix-loop-helix gene family in the green anole lizard, Anolis carolinensis.
PMID:23756994
Antisense expression of peach mildew resistance locus O (PpMlo1) gene confers cross-species resistance to powdery mildew in Fragaria x ananassa.
PMID:23728780
Prediction of the protein components of a putative Calanus finmarchicus (Crustacea, Copepoda) circadian signaling system using a de novo assembled transcriptome.
PMID:23727418
Distinct mechanisms of transcriptional pausing orchestrated by GAGA factor and M1BP, a novel transcription factor.
PMID:23708796
In silico analysis of the fucosylation-associated genome of the human blood fluke Schistosoma mansoni: cloning and characterization of the fucosyltransferase multigene family.
PMID:23696810
Chitin-binding domains of Escherichia coli ChiA mediate interactions with intestinal epithelial cells in mice with colitis.
PMID:23684751
The C. elegans gene pan-1 encodes novel transmembrane and cytoplasmic leucine-rich repeat proteins and promotes molting and the larva to adult transition.
PMID:23682709
Molecular characterization of calcineurin B from the non-virulent Trypanosoma rangeli kinetoplastid indicates high gene conservation.
PMID:23677712
Computational meta'omics for microbial community studies.
PMID:23670539
Structural determinants at the interface of the ARC2 and leucine-rich repeat domains control the activation of the plant immune receptors Rx1 and Gpa2.
PMID:23660837
Reconstituting protein interaction networks using parameter-dependent domain-domain interactions.
PMID:23651452
Global analysis of apicomplexan protein S-acyl transferases reveals an enzyme essential for invasion.
PMID:23638681
Characterization of Rice NADPH oxidase genes and their expression under various environmental conditions.
PMID:23629674
A novel two-component response regulator links rpf with biofilm formation and virulence of Xanthomonas axonopodis pv. citri.
PMID:23626857
Single-molecule FRET reveals the native-state dynamics of the IκBα ankyrin repeat domain.
PMID:23619335
Two crystal structures of Bombyx mori lipoprotein 3 - structural characterization of a new 30-kDa lipoprotein family member.
PMID:23613829
Evolution and variability of Solanum RanGAP2, a cofactor in the incompatible interaction between the resistance protein GPA2 and the Globodera pallida effector Gp-RBP-1.
PMID:23601377
Identification of protein complex associated with LYT1 of Trypanosoma cruzi.
PMID:23586042
Role of Homeodomain leucine zipper (HD-Zip) IV transcription factors in plant development and plant protection from deleterious environmental factors.
PMID:23584027
Origin and evolution of the cystic fibrosis transmembrane regulator protein R domain.
PMID:23578801
Organization of lamprey variable lymphocyte receptor C locus and repertoire development.
PMID:23487799
Identification of a novel metalloproteinase and its role in juvenile development of the tobacco hornworm, Manduca sexta (Linnaeus).
PMID:23475557
Increasing sequence search sensitivity with transitive alignments.
PMID:23457449
PepT1 mRNA expression levels in sea bream (Sparus aurata) fed different plant protein sources.
PMID:23449729
All repeats are not equal: a module-based approach to guide repeat protein design.
PMID:23434848
Light-dependent functions of the Fusarium fujikuroi CryD DASH cryptochrome in development and secondary metabolism.
PMID:23417004
Genomic reconstruction of transcriptional regulatory networks in lactic acid bacteria.
PMID:23398941
The diversity and evolution of Wolbachia ankyrin repeat domain genes.
PMID:23390535
Intricate interplay between astrocytes and motor neurons in ALS.
PMID:23388633
Genome-wide analysis of histone modifiers in tomato: gaining an insight into their developmental roles.
PMID:23356725
Regulation of a truncated isoform of AMP-activated protein kinase α (AMPKα) in response to hypoxia in the muscle of Pacific oyster Crassostrea gigas.
PMID:23354411
Molecular characterization of the full-length L and M RNAs of Tomato yellow ring virus, a member of the genus Tospovirus.
PMID:23334441
Specific Conformational States of Ras GTPase upon Effector Binding.
PMID:23316125
Architecture of the soluble receptor Aer2 indicates an in-line mechanism for PAS and HAMP domain signaling.
PMID:23274111
Tetratricopeptide repeat motifs in the world of bacterial pathogens: role in virulence mechanisms.
PMID:23264049
Syntrophin proteins as Santa Claus: role(s) in cell signal transduction.
PMID:23263165
Phylogenetic analyses uncover a novel clade of transferrin in nonmammalian vertebrates.
PMID:23258311
Identification of MDP (muramyl dipeptide)-binding key domains in NOD2 (nucleotide-binding and oligomerization domain-2) receptor of Labeo rohita.
PMID:23255217
Unique secreted-surface protein complex of Lactobacillus rhamnosus, identified by phage display.
PMID:23233310
Intracellularly induced cyclophilins play an important role in stress adaptation and virulence of Brucella abortus.
PMID:23230297
Why orange Guaymas Basin Beggiatoa spp. are orange: single-filament-genome-enabled identification of an abundant octaheme cytochrome with hydroxylamine oxidase, hydrazine oxidase, and nitrite reductase activities.
PMID:23220958
Proteomic characterization and evolutionary analyses of zona pellucida domain-containing proteins in the egg coat of the cephalochordate, Branchiostoma belcheri.
PMID:23216630
PolA1, a putative DNA polymerase I, is coexpressed with PerR and contributes to peroxide stress defenses of group A Streptococcus.
PMID:23204468
Fife, a Drosophila Piccolo-RIM homolog, promotes active zone organization and neurotransmitter release.
PMID:23197698
Putative SF2 helicases of the early-branching eukaryote Giardia lamblia are involved in antigenic variation and parasite differentiation into cysts.
PMID:23190735
Evaluation of immunoprotective activity of six leptospiral proteins in the hamster model of leptospirosis.
PMID:23173023
Dynamics of domain coverage of the protein sequence universe.
PMID:23157439
Genome-wide analysis of putative peroxiredoxin in unicellular and filamentous cyanobacteria.
PMID:23157370
The molecular clockwork of the fire ant Solenopsis invicta.
PMID:23152747
Cloning, purification and preliminary X-ray data analysis of the human ID2 homodimer.
PMID:23143248
Chromatin remodeling by the CHD7 protein is impaired by mutations that cause human developmental disorders.
PMID:23134727
Comparative genomics of neuroglobin reveals its early origins.
PMID:23133533
Reanalysis of RNA-sequencing data reveals several additional fusion genes with multiple isoforms.
PMID:23119097
The rice B-box zinc finger gene family: genomic identification, characterization, expression profiling and diurnal analysis.
PMID:23118960
Plasminogen binding proteins and plasmin generation on the surface of Leptospira spp.: the contribution to the bacteria-host interactions.
PMID:23118516
Synthase-dependent exopolysaccharide secretion in Gram-negative bacteria.
PMID:23117123
The transcriptional landscape of the deep-sea bacterium Photobacterium profundum in both a toxR mutant and its parental strain.
PMID:23107454
Class II, major histocompatibility complex, transactivator (CIITA) in channel catfish: identification and expression patterns responding to different pathogens.
PMID:23073771
Transcriptional profiles of mating-responsive genes from testes and male accessory glands of the Mediterranean fruit fly, Ceratitis capitata.
PMID:23071645
The chicken SLAM family.
PMID:23064403
Molecular cloning and characterization of an IKK homologue from amphioxus (Branchiostoma belcheri).
PMID:23053972
ER stress increases StarD5 expression by stabilizing its mRNA and leads to relocalization of its protein from the nucleus to the membranes.
PMID:23053693
The Rab GTPase-activating protein TBC1D4/AS160 contains an atypical phosphotyrosine-binding domain that interacts with plasma membrane phospholipids to facilitate GLUT4 trafficking in adipocytes.
PMID:23045393
Analysis of salivary gland transcripts of the sand fly Lutzomyia ayacuchensis, a vector of Andean-type cutaneous leishmaniasis.
PMID:23000112
SLiMPrints: conservation-based discovery of functional motif fingerprints in intrinsically disordered protein regions.
PMID:22977176
Increasing coverage of transcription factor position weight matrices through domain-level homology.
PMID:22952610
Extracytoplasmic function σ factors of the widely distributed group ECF41 contain a fused regulatory domain.
PMID:22950025
Assignment of protein sequences to existing domain and family classification systems: Pfam and the PDB.
PMID:22942020
A genome-wide identification and analysis of the basic helix-loop-helix transcription factors in the ponerine ant, Harpegnathos saltator.
PMID:22938134
GASP/WFIKKN proteins: evolutionary aspects of their functions.
PMID:22937083
Comparative analysis of zinc finger proteins involved in plant disease resistance.
PMID:22916136
Subcellular localization of extracytoplasmic proteins in monoderm bacteria: rational secretomics-based strategy for genomic and proteomic analyses.
PMID:22912771
Evolution of SH2 domains and phosphotyrosine signalling networks.
PMID:22889907
The accessory Sec protein Asp2 modulates GlcNAc deposition onto the serine-rich repeat glycoprotein GspB.
PMID:22885294
Formation of Golgi-derived active zone precursor vesicles.
PMID:22875941
Origin of metazoan cadherin diversity and the antiquity of the classical cadherin/β-catenin complex.
PMID:22837400
AP2/ERF Transcription Factor in Rice: Genome-Wide Canvas and Syntenic Relationships between Monocots and Eudicots.
PMID:22807623
Subtractive libraries for prospecting differentially expressed genes in the soybean under water deficit.
PMID:22802715
Epigenetic control of alternative mRNA processing at the imprinted Herc3/Nap1l5 locus.
PMID:22790983
Chimeric cellulase matrix for investigating intramolecular synergism between non-hydrolytic disruptive functions of carbohydrate-binding modules and catalytic hydrolysis.
PMID:22778256
Comparative analysis of diguanylate cyclase and phosphodiesterase genes in Klebsiella pneumoniae.
PMID:22776320
In silico analysis of sequenced strains of Clostridium difficile reveals a related set of conjugative transposons carrying a variety of accessory genes.
PMID:22754747
Disruption of an EHMT1-associated chromatin-modification module causes intellectual disability.
PMID:22726846
A SEL1L mutation links a canine progressive early-onset cerebellar ataxia to the endoplasmic reticulum-associated protein degradation (ERAD) machinery.
PMID:22719266
Nonmuscle myosin II is required for internalization of the epidermal growth factor receptor and modulation of downstream signaling.
PMID:22718763
Expression analysis of turkey (Meleagris gallopavo) toll-like receptors and molecular characterization of avian specific TLR15.
PMID:22699880
SH3 domains come of age.
PMID:22683951
Deciphering the genomic structure, function and evolution of carotenogenesis related phytoene synthases in grasses.
PMID:22672222
Sequence and topological characterization of Toll-like receptor 8 gene of Indian riverine buffalo (Bubalus bubalis).
PMID:22622670
SH3 domain tyrosine phosphorylation--sites, role and evolution.
PMID:22615764
SPO71 mediates prospore membrane size and maturation in Saccharomyces cerevisiae.
PMID:22611022
High-throughput analysis of peptide-binding modules.
PMID:22610655
The RGD finger of Del-1 is a unique structural feature critical for integrin binding.
PMID:22601780
Comparative Genomics Reveals Key Gain-of-Function Events in Foxp3 during Regulatory T Cell Evolution.
PMID:22590469
3D profile-based approach to proteome-wide discovery of novel human chemokines.
PMID:22586462
Spectraplakins: master orchestrators of cytoskeletal dynamics.
PMID:22584905
Obscurin and KCTD6 regulate cullin-dependent small ankyrin-1 (sAnk1.5) protein turnover.
PMID:22573887
The Helicobacter pylori autotransporter ImaA (HP0289) modulates the immune response and contributes to host colonization.
PMID:22566509
Transcriptome analysis in tardigrade species reveals specific molecular pathways for stress adaptations.
PMID:22563243
Evolution of the C-type lectin-like receptor genes of the DECTIN-1 cluster in the NK gene complex.
PMID:22550468
A novel putative auxin carrier family regulates intracellular auxin homeostasis in plants.
PMID:22504182
Epigenetic protein families: a new frontier for drug discovery.
PMID:22498752
Functional validation of hydrophobic adaptation to physiological temperature in the small heat shock protein αA-crystallin.
PMID:22479631
Features of two proteins of Leptospira interrogans with potential role in host-pathogen interactions.
PMID:22463075
Genome-wide functional annotation of dual-specificity protein- and lipid-binding modules that regulate protein interactions.
PMID:22445486
Identification of single nucleotide polymorphisms in the bovine Toll-like receptor 1 gene and association with health traits in cattle.
PMID:22417166
A study on mutational dynamics of simple sequence repeats in relation to mismatch repair system in prokaryotic genomes.
PMID:22415400
The endonuclease Ankle1 requires its LEM and GIY-YIG motifs for DNA cleavage in vivo.
PMID:22399800
Identification of potential drug targets implicated in Parkinson's disease from human genome: insights of using fused domains in hypothetical proteins as probes.
PMID:22389811
The Legionella pneumophila effector VipA is an actin nucleator that alters host cell organelle trafficking.
PMID:22383880
The intertransmembrane region of Kaposi's sarcoma-associated herpesvirus modulator of immune recognition 2 contributes to B7-2 downregulation.
PMID:22379101
Metabolic stasis in an ancient symbiosis: genome-scale metabolic networks from two Blattabacterium cuenoti strains, primary endosymbionts of cockroaches.
PMID:22376077
Tandem repeat markers as novel diagnostic tools for high resolution fingerprinting of Wolbachia.
PMID:22375862
Analysis of the genome of the sexually transmitted insect virus Helicoverpa zea nudivirus 2.
PMID:22355451
Biochemical characterization and differential expression of a 16.5-kilodalton tegument-associated antigen from the liver fluke Fasciola hepatica.
PMID:22278327
The C terminus of the large tegument protein pUL36 contains multiple capsid binding sites that function differently during assembly and cell entry of herpes simplex virus.
PMID:22258258
Interspecific sex in grass smuts and the genetic diversity of their pheromone-receptor system.
PMID:22242007
A mutation in intracellular loop 4 affects the drug-efflux activity of the yeast multidrug resistance ABC transporter Pdr5p.
PMID:22238618
Mechanism of proton/substrate coupling in the heptahelical lysosomal transporter cystinosin.
PMID:22232659
Genome-wide comparative in silico analysis of calcium transporters of rice and sorghum.
PMID:22196357
Isolation of a novel cutinase homolog with polyethylene terephthalate-degrading activity from leaf-branch compost by using a metagenomic approach.
PMID:22194294
The evolution of the Gp-Rbp-1 gene in Globodera pallida includes multiple selective replacements.
PMID:22192092
The Myxococcus xanthus spore cuticula protein C is a fragment of FibA, an extracellular metalloprotease produced exclusively in aggregated cells.
PMID:22174937
Parallel signatures of sequence evolution among hearing genes in echolocating mammals: an emerging model of genetic convergence.
PMID:22167055
The SH2 domain-containing proteins in 21 species establish the provenance and scope of phosphotyrosine signaling in eukaryotes.
PMID:22155787
Drug discovery toward antagonists of methyl-lysine binding proteins.
PMID:22145013
Purification, crystallization and preliminary crystallographic studies of the TLDc domain of oxidation resistance protein 2 from zebrafish.
PMID:22102041
The Neurospora crassa DCC-1 protein, a putative histidine kinase, is required for normal sexual and asexual development and carotenogenesis.
PMID:22058142
SMART 7: recent updates to the protein domain annotation resource.
PMID:22053084
Not all transmembrane helices are born equal: Towards the extension of the sequence homology concept to membrane proteins.
PMID:22024092
Characterization of the Src/Abl hybrid kinase SmTK6 of Schistosoma mansoni.
PMID:22013071
Similarities and differences in peripheral blood gene-expression signatures of individuals with schizophrenia and their first-degree biological relatives.
PMID:21972136
Nitisinone improves eye and skin pigmentation defects in a mouse model of oculocutaneous albinism.
PMID:21968110
Modelling a ciliopathy: Ahi1 knockdown in model systems reveals an essential role in brain, retinal, and renal development.
PMID:21959375
Role of Sphingomonas sp. strain Fr1 PhyR-NepR-σEcfG cascade in general stress response and identification of a negative regulator of PhyR.
PMID:21949070
Transcriptional analysis of cell growth and morphogenesis in the unicellular green alga Micrasterias (Streptophyta), with emphasis on the role of expansin.
PMID:21943227
Expression level of a chimeric kinase governs entry into sporulation in Bacillus subtilis.
PMID:21926229
Evolution at the subgene level: domain rearrangements in the Drosophila phylogeny.
PMID:21900599
Prioritizing orphan proteins for further study using phylogenomics and gene expression profiles in Streptomyces coelicolor.
PMID:21899768
Identification of a novel aminopeptidase P-like gene (OnAPP) possibly involved in Bt toxicity and resistance in a major corn pest (Ostrinia nubilalis).
PMID:21887358
Wdr18 is required for Kupffer's vesicle formation and regulation of body asymmetry in zebrafish.
PMID:21876750
Genetic organisation, mobility and predicted functions of genes on integrated, mobile genetic elements in sequenced strains of Clostridium difficile.
PMID:21876735
Cross-Genome Comparisons of Newly Identified Domains in Mycoplasma gallisepticum and Domain Architectures with Other Mycoplasma species.
PMID:21860605
Substrate and product specificities of SET domain methyltransferases.
PMID:21847010
The novel leptospiral surface adhesin Lsa20 binds laminin and human plasminogen and is probably expressed during infection.
PMID:21844229
Ferlins: regulators of vesicle fusion for auditory neurotransmission, receptor trafficking and membrane repair.
PMID:21838746
Predicting protein kinase specificity: Predikin update and performance in the DREAM4 challenge.
PMID:21829434
Molecular evolution of the LNX gene family.
PMID:21827680
Overexpression, crystallization and preliminary X-ray crystallographic analysis of Pyrococcus furiosus PF2050, a member of the DUF2666 protein family.
PMID:21821898
Molecular cloning and copy number variation of a ferritin subunit (Fth1) and its association with growth in freshwater pearl mussel Hyriopsis cumingii.
PMID:21818403
A human sterile alpha motif domain polymerizome.
PMID:21805519
Structural and functional evaluation of C. elegans filamins FLN-1 and FLN-2.
PMID:21799850
Genomic identification of a putative circadian system in the cladoceran crustacean Daphnia pulex.
PMID:21798832
Subcellular localization and regulation of StarD4 protein in macrophages and fibroblasts.
PMID:21767660
Genes Encoding Callose Synthase and Phytochrome A Are Adjacent to a MAP3Kα-Like Gene in Beta vulgaris US H20.
PMID:21760770
Phylogeny-wide analysis of social amoeba genomes highlights ancient origins for complex intercellular communication.
PMID:21757610
Physicochemical characterization and functional site analysis of lactoferrin gene of Vechur cow.
PMID:21738329
Identification of a chemoreceptor zinc-binding domain common to cytoplasmic bacterial chemoreceptors.
PMID:21725005
In search of Brucella abortus type IV secretion substrates: screening and identification of four proteins translocated into host cells through VirB system.
PMID:21707904
An essential tyrosine phosphatase homolog regulates cell separation, outer membrane integrity, and morphology in Caulobacter crescentus.
PMID:21705597
Overexpression of the trehalose-6-phosphate synthase gene OsTPS1 enhances abiotic stress tolerance in rice.
PMID:21698458
Identification and characterization of five transcription factors that are associated with evolutionarily conserved immune signaling pathways in the schistosome-transmitting snail Biomphalaria glabrata.
PMID:21696828
Independent analysis of the flagellum surface and matrix proteomes provides insight into flagellum signaling in mammalian-infectious Trypanosoma brucei.
PMID:21685506
Classical swine fever virus N(pro) limits type I interferon induction in plasmacytoid dendritic cells by interacting with interferon regulatory factor 7.
PMID:21680532
Specific and modular binding code for cytosine recognition in Pumilio/FBF (PUF) RNA-binding domains.
PMID:21653694
The Coxiella burnetii Dot/Icm system delivers a unique repertoire of type IV effectors into host cells and is required for intracellular replication.
PMID:21637816
A genomic analysis of disease-resistance genes encoding nucleotide binding sites in Sorghum bicolor.
PMID:21637485
Genome-wide analysis of the heat shock transcription factors in Populus trichocarpa and Medicago truncatula.
PMID:21625849
Differential regulation of PDE5 expression in left and right ventricles of feline hypertrophy models.
PMID:21625548
A novel sensor kinase is required for Bordetella bronchiseptica to colonize the lower respiratory tract.
PMID:21606184
Analysis of trehalose-6-phosphate synthase (TPS) gene family suggests the formation of TPS complexes in rice.
PMID:21598083
Characterization and evolution of MHC class II B genes in Ardeid birds.
PMID:21590337
Expression of Anaplasma marginale ankyrin repeat-containing proteins during infection of the mammalian host and tick vector.
PMID:21576345
Mining the TRAF6/p62 interactome for a selective ubiquitination motif.
PMID:21554762
Active participation of cellular chaperone Hsp90 in regulating the function of rotavirus nonstructural protein 3 (NSP3).
PMID:21489987
TP0326, a Treponema pallidum β-barrel assembly machinery A (BamA) orthologue and rare outer membrane protein.
PMID:21488980
A novel specificity protein 1 (SP1)-like gene regulating protein kinase C-1 (Pkc1)-dependent cell wall integrity and virulence factors in Cryptococcus neoformans.
PMID:21487010
On the mode of action of emodepside: slow effects on membrane potential and voltage-activated currents in Ascaris suum.
PMID:21486286
Functional reconstitution of Haemonchus contortus acetylcholine receptors in Xenopus oocytes provides mechanistic insights into levamisole resistance.
PMID:21486278
The Structural Biology Knowledgebase: a portal to protein structures, sequences, functions, and methods.
PMID:21472436
The developmental regulator protein Gon4l associates with protein YY1, co-repressor Sin3a, and histone deacetylase 1 and mediates transcriptional repression.
PMID:21454521
Baculovirus VP80 protein and the F-actin cytoskeleton interact and connect the viral replication factory with the nuclear periphery.
PMID:21450830
Molecular modeling and in silico characterization of Mycobacterium tuberculosis TlyA: possible misannotation of this tubercle bacilli-hemolysin.
PMID:21443791
Genomes of the most dangerous epidemic bacteria have a virulence repertoire characterized by fewer genes but more toxin-antitoxin modules.
PMID:21437250
Evolution of parallel spindles like genes in plants and highlight of unique domain architecture#.
PMID:21435253
Towards a semen proteome of the dengue vector mosquito: protein identification and potential functions.
PMID:21423647
Small-molecule ligands of methyl-lysine binding proteins.
PMID:21417280
Jerky/Earthbound facilitates cell-specific Wnt/Wingless signalling by modulating β-catenin-TCF activity.
PMID:21399610
Genome wide analysis of the bovine mucin genes and their gastrointestinal transcription profile.
PMID:21385362
Secretion of novel SEL1L endogenous variants is promoted by ER stress/UPR via endosomes and shed vesicles in human cancer cells.
PMID:21359144
Molecular cloning and characterization of the srdBCA operon, encoding the respiratory selenate reductase complex, from the selenate-reducing bacterium Bacillus selenatarsenatis SF-1.
PMID:21357486
Comparative genomics of the social amoebae Dictyostelium discoideum and Dictyostelium purpureum.
PMID:21356102
Small molecule inhibitors of Staphylococcus aureus RnpA alter cellular mRNA turnover, exhibit antimicrobial activity, and attenuate pathogenesis.
PMID:21347352
Rad23 escapes degradation because it lacks a proteasome initiation region.
PMID:21304521
Differential gene expression in liver and small intestine from lactating rats compared to age-matched virgin controls detects increased mRNA of cholesterol biosynthetic genes.
PMID:21291544
PRBP plays a role in plastid ribosomal RNA maturation and chloroplast biogenesis in Nicotiana benthamiana.
PMID:21290146
Protein domain assignment from the recurrence of locally similar structures.
PMID:21287617
An N-terminal truncated carboxypeptidase E splice isoform induces tumor growth and is a biomarker for predicting future metastasis in human cancers.
PMID:21285511
Chilling of dormant buds hyperinduces FLOWERING LOCUS T and recruits GA-inducible 1,3-beta-glucanases to reopen signal conduits and release dormancy in Populus.
PMID:21282527
Proteomic and transcriptomic elucidation of the mutant ralstonia eutropha G+1 with regard to glucose utilization.
PMID:21278273
Cyclic diguanylate signaling proteins control intracellular growth of Legionella pneumophila.
PMID:21249170
Crystal structure of the human histone methyltransferase ASH1L catalytic domain and its implications for the regulatory mechanism.
PMID:21239497
Insertion sequence-excision enhancer removes transposable elements from bacterial genomes and induces various genomic deletions.
PMID:21224843
Extensions of PDZ domains as important structural and functional elements.
PMID:21203915
Polymorphisms in the TLR4 and TLR5 gene are significantly associated with inflammatory bowel disease in German shepherd dogs.
PMID:21203467
Distinct ligand specificity of the Tiam1 and Tiam2 PDZ domains.
PMID:21192692
Asparagine and aspartate hydroxylation of the cytoskeletal ankyrin family is catalyzed by factor-inhibiting hypoxia-inducible factor.
PMID:21177872
Identification of a GCC transcription factor responding to fruit colour change events in citrus through the transcriptomic analyses of two mutants.
PMID:21159189
Evolution of domain promiscuity in eukaryotic genomes--a perspective from the inferred ancestral domain architectures.
PMID:21127809
A solute-binding protein for iron transport in Streptococcus iniae.
PMID:21122131
Signatures of selection in loci governing major colour patterns in Heliconius butterflies and related species.
PMID:21114846
The FN3 and BRCT motifs in the exomer component Chs5p define a conserved module that is necessary and sufficient for its function.
PMID:21113731
Ethylene directs auxin to control root cell expansion.
PMID:21105933
Pelizaeus-Merzbacher-like disease caused by AIMP1/p43 homozygous mutation.
PMID:21092922
Subnuclear targeting of the RNA-binding motif protein RBM6 to splicing speckles and nascent transcripts.
PMID:21086038
Inflammasomes and their activation.
PMID:21083527
Type 2C protein phosphatases in fungi.
PMID:21076010
ARABIDILLO proteins have a novel and conserved domain structure important for the regulation of their stability.
PMID:21052782
Toward understanding the mechanism of action of the yeast multidrug resistance transporter Pdr5p: a molecular modeling study.
PMID:21034832
Genome-wide comparative gene family classification.
PMID:20976221
Protein evolution by molecular tinkering: diversification of the nuclear receptor superfamily from a ligand-dependent ancestor.
PMID:20957188
A conserved helical capping hydrogen bond in PAS domains controls signaling kinetics in the superfamily prototype photoactive yellow protein.
PMID:20954744
Characterization and comparison of two binding sites on obscurin for small ankyrin 1.
PMID:20949908
Characterization of the functional domain of β2-microglobulin from the Asian seabass, Lates calcarifer.
PMID:20949082
DUFs: families in search of function.
PMID:20944204
Involvement of EupR, a response regulator of the NarL/FixJ family, in the control of the uptake of the compatible solutes ectoines by the halophilic bacterium Chromohalobacter salexigens.
PMID:20942908
Molecular cloning of an immunogenic protein of Baylisascaris procyonis and expression in Escherichia coli for use in developing improved serodiagnostic assays.
PMID:20926699
Identification, phylogeny, and transcript profiling of ERF family genes during development and abiotic stress treatments in tomato.
PMID:20922546
Robustness and evolvability in the functional anatomy of a PER-ARNT-SIM (PAS) domain.
PMID:20889915
Structural basis of poly(ADP-ribose) recognition by the multizinc binding domain of checkpoint with forkhead-associated and RING Domains (CHFR).
PMID:20880844
The use of lectins as markers for differentiated secretory cells in planarians.
PMID:20865784
Conservation, duplication, and loss of the Tor signaling pathway in the fungal kingdom.
PMID:20863387
Identification and characterization of a serine protease inhibitor with two trypsin inhibitor-like domains from the human hookworm Ancylostoma duodenale.
PMID:20852886
Characterization of a two-component regulatory system that regulates succinate-mediated catabolite repression in Sinorhizobium meliloti.
PMID:20817764
Shr of group A streptococcus is a new type of composite NEAT protein involved in sequestering haem from methaemoglobin.
PMID:20807204
The protease inhibitor alpha-2-macroglobulin-like-1 is the p170 antigen recognized by paraneoplastic pemphigus autoantibodies in human.
PMID:20805888
A novel six-rhodopsin system in a single archaeon.
PMID:20802037
The Ustilago maydis Clp1 protein orchestrates pheromone and b-dependent signaling pathways to coordinate the cell cycle and pathogenic development.
PMID:20729384
The proliferation and migration of immature germ cells in the mussel, Mytilus galloprovincialis: observation of the expression pattern in the M. galloprovincialis vasa-like gene (Myvlg) by in situ hybridization.
PMID:20725841
Functional microdomains in bacterial membranes.
PMID:20713508
Genome-wide survey and evolutionary analysis of trypsin proteases in apicomplexan parasites.
PMID:20691395
An insight into the sequential, structural and phylogenetic properties of banana 1-aminocyclopropane-1-carboxylate synthase 1 and study of its interaction with pyridoxal-5'-phosphate and aminoethoxyvinylglycine.
PMID:20689184
More than 1,001 problems with protein domain databases: transmembrane regions, signal peptides and the issue of sequence homology.
PMID:20686689
Phylogenetic and regulatory region analysis of Wnt5 genes reveals conservation of a regulatory module with putative implication in pancreas development.
PMID:20684756
Identification and structural characterization of FYVE domain-containing proteins of Arabidopsis thaliana.
PMID:20678208
NENA, a Lotus japonicus homolog of Sec13, is required for rhizodermal infection by arbuscular mycorrhiza fungi and rhizobia but dispensable for cortical endosymbiotic development.
PMID:20675572
Isolation of SPINK6 in human skin: selective inhibitor of kallikrein-related peptidases.
PMID:20667819
Phylogenetic analysis of ferlin genes reveals ancient eukaryotic origins.
PMID:20667140
Tinkering evolution of post-transcriptional RNA regulons: puf3p in fungi as an example.
PMID:20661438
The bovine chemokine receptors and their mRNA abundance in mononuclear phagocytes.
PMID:20642824
TaCHP: a wheat zinc finger protein gene down-regulated by abscisic acid and salinity stress plays a positive role in stress tolerance.
PMID:20639406
Structure of the cytoplasmic segment of histidine kinase receptor QseC, a key player in bacterial virulence.
PMID:20594156
Extending the chinchilla middle ear epithelial model for mucin gene investigation.
PMID:20591507
In vitro identification of novel plasminogen-binding receptors of the pathogen Leptospira interrogans.
PMID:20582320
The 2M6 antigen is a Müller cell-specific intracellular membrane-associated protein of the sarcolemmal-membrane-associated protein family and is also TopAP.
PMID:20577597
Does the core circadian clock in the moss Physcomitrella patens (Bryophyta) comprise a single loop?
PMID:20550695
High-throughput production of human proteins for crystallization: the SGC experience.
PMID:20541610
Molecular cloning and biochemical characterization of a novel erythrose reductase from Candida magnoliae JH110.
PMID:20529366
PUDGE: a flexible, interactive server for protein structure prediction.
PMID:20525783
The Protein Disulfide Isomerase gene family in bread wheat (T. aestivum L.).
PMID:20525253
Ontologies in quantitative biology: a basis for comparison, integration, and discovery.
PMID:20520843
PDZ domains and their binding partners: structure, specificity, and modification.
PMID:20509869
The structure of the FYR domain of transforming growth factor beta regulator 1.
PMID:20506279
Identification of a chemoreceptor for tricarboxylic acid cycle intermediates: differential chemotactic response towards receptor ligands.
PMID:20498372
Molecular characterization and comparative transcriptional analysis of LMW-m-type genes from wheat (Triticum aestivum L.) and Aegilops species.
PMID:20490445
Molecular characterization and differential expression of beta-1,3-glucanase during ripening in banana fruit in response to ethylene, auxin, ABA, wounding, cold and light-dark cycles.
PMID:20467747
Analysis of Transcripts Expressed in One-Day-Old Larvae and Fifth Instar Silk Glands of Tasar Silkworm, Antheraea mylitta.
PMID:20454581
A novel viral responsive protein is involved in hemocyte homeostasis in the black tiger shrimp, Penaeus monodon.
PMID:20444692
Genome-wide in silico screen for CCCH-type zinc finger proteins of Trypanosoma brucei, Trypanosoma cruzi and Leishmania major.
PMID:20444260
Assembly, structure, and function of the 26S proteasome.
PMID:20427185
The enzyme and the cDNA sequence of a thermolabile and double-strand specific DNase from Northern shrimps (Pandalus borealis).
PMID:20421970
Global transcriptome analysis of spore formation in Myxococcus xanthus reveals a locus necessary for cell differentiation.
PMID:20420673
Functional characterization of LcpA, a surface-exposed protein of Leptospira spp. that binds the human complement regulator C4BP.
PMID:20404075
High-throughput computational structure-based characterization of protein families: START domains and implications for structural genomics.
PMID:20383749
Quantifying protein-protein interactions in high throughput using protein domain microarrays.
PMID:20360771
Genome-wide comparative analysis of metacaspases in unicellular and filamentous cyanobacteria.
PMID:20334693
YfiBNR mediates cyclic di-GMP dependent small colony variant formation and persistence in Pseudomonas aeruginosa.
PMID:20300602
A flexible docking scheme to explore the binding selectivity of PDZ domains.
PMID:20196074
Identification of Bacillus cereus genes specifically expressed during growth at low temperatures.
PMID:20190083
Structure of a double ubiquitin-like domain in the talin head: a role in integrin activation.
PMID:20150896
The effects of PKCalpha phosphorylation on the extensibility of titin's PEVK element.
PMID:20149875
Molecular interfaces of the galactose-binding protein Tectonin domains in host-pathogen interaction.
PMID:20118243
Reconstitution of a frizzled8.Wnt3a.LRP6 signaling complex reveals multiple Wnt and Dkk1 binding sites on LRP6.
PMID:20093360
FimR and FimS: biofilm formation and gene expression in Porphyromonas gingivalis.
PMID:20061484
Insights into the domain and repeat architecture of target of rapamycin.
PMID:20060908
A planarian p53 homolog regulates proliferation and self-renewal in adult stem cell lineages.
PMID:20040488
Nucleases encoded by the integrated elements CJIE2 and CJIE4 inhibit natural transformation of Campylobacter jejuni.
PMID:20023031
Cyclic nucleotide binding GAF domains from phosphodiesterases: structural and mechanistic insights.
PMID:20004158
Contributions of Francisella tularensis subsp. novicida chitinases and Sec secretion system to biofilm formation on chitin.
PMID:19948864
Mutations in classical swine fever virus NS4B affect virulence in swine.
PMID:19923180
Involvement of a novel preimplantation-specific gene encoding the high mobility group box protein Hmgpi in early embryonic development.
PMID:19915186
Phylogenetic analysis and homology modelling of Paracentrotus lividus nectin.
PMID:19908157
A repertoire of the dominant transcripts from the salivary glands of the blood-sucking bug, Triatoma dimidiata, a vector of Chagas disease.
PMID:19900580
Polar localization of the CckA histidine kinase and cell cycle periodicity of the essential master regulator CtrA in Caulobacter crescentus.
PMID:19897656
Localized plasticity in the streamlined genomes of vinyl chloride respiring Dehalococcoides.
PMID:19893622
Molecular characterization and expression analysis of lipopolysaccharide and β-1,3-glucan-binding protein (LGBP) from pearl oyster Pinctada fucata.
PMID:19888673
Sequence variations of GRM6 in patients with high myopia.
PMID:19862333
Partially-supervised protein subclass discovery with simultaneous annotation of functional residues.
PMID:19857261
Tandem KH domains of Khd4 recognize AUACCC and are essential for regulation of morphology as well as pathogenicity in Ustilago maydis.
PMID:19854870
Binding the atypical RA domain of Ste50p to the unfolded Opy2p cytoplasmic tail is essential for the high-osmolarity glycerol pathway.
PMID:19846660
Proteomics analysis of A33 immunoaffinity-purified exosomes released from the human colon tumor cell line LIM1215 reveals a tissue-specific protein signature.
PMID:19837982
Comprehensive classification of nucleotidyltransferase fold proteins: identification of novel families and their representatives in human.
PMID:19833706
Origin and evolution of the Notch signalling pathway: an overview from eukaryotic genomes.
PMID:19825158
Novel putative glycosylphosphatidylinositol-anchored micronemal antigen of Plasmodium falciparum that binds to erythrocytes.
PMID:19820120
Physical requirements and functional consequences of complex formation between the cytomegalovirus IE1 protein and human STAT2.
PMID:19812155
Regulation of mu opioid receptor internalization by the scaffold protein RanBPM.
PMID:19788913
Distribution and phylogeny of light-oxygen-voltage-blue-light-signaling proteins in the three kingdoms of life.
PMID:19783626
The myxoma virus m-t5 ankyrin repeat host range protein is a novel adaptor that coordinately links the cellular signaling pathways mediated by Akt and Skp1 in virus-infected cells.
PMID:19776120
Testicular cell adhesion molecule 1 (TCAM1) is not essential for fertility.
PMID:19766163
Structural and functional constraints in the evolution of protein families.
PMID:19756040
In Silico screening for functional candidates amongst hypothetical proteins.
PMID:19754976
An evolutionary transition of Vasa regulation in echinoderms.
PMID:19754712
FGFRL1 is a neglected putative actor of the FGF signalling pathway present in all major metazoan phyla.
PMID:19740411
Chitinases are essential for sexual development but not vegetative growth in Cryptococcus neoformans.
PMID:19734369
A comprehensive classification and evolutionary analysis of plant homeobox genes.
PMID:19734295
Crystallization and preliminary X-ray diffraction analysis of the C-terminal domain of the human spliceosomal DExD/H-box protein hPrp22.
PMID:19724143
Novel features of the polysaccharide-digesting gliding bacterium Flavobacterium johnsoniae as revealed by genome sequence analysis.
PMID:19717629
CP250, a novel acidic coiled-coil protein of the Dictyostelium centrosome, affects growth, chemotaxis, and the nuclear envelope.
PMID:19692569
The Arabidopsis PLEIOTROPIC DRUG RESISTANCE8/ABCG36 ATP binding cassette transporter modulates sensitivity to the auxin precursor indole-3-butyric acid.
PMID:19648296
Processive endoglucanases mediate degradation of cellulose by Saccharophagus degradans.
PMID:19617364
A novel human tectonin protein with multivalent beta-propeller folds interacts with ficolin and binds bacterial LPS.
PMID:19606221
Characterization of equine and other vertebrate TLR3, TLR7, and TLR8 genes.
PMID:19568743
Association of PDE11A global haplotype with major depression and antidepressant drug response.
PMID:19557111
Genetic analysis of activation of the Vibrio cholerae Cpx pathway.
PMID:19542291
Nature of the protein universe.
PMID:19541617
A novel "four-component" two-component signal transduction mechanism regulates developmental progression in Myxococcus xanthus.
PMID:19535336
Visualising biological data: a semantic approach to tool and database integration.
PMID:19534744
Signals, regulatory networks, and materials that build and break bacterial biofilms.
PMID:19487730
A novel human NatA Nalpha-terminal acetyltransferase complex: hNaa16p-hNaa10p (hNat2-hArd1).
PMID:19480662
UBXD4, a UBX-containing protein, regulates the cell surface number and stability of alpha3-containing nicotinic acetylcholine receptors.
PMID:19474315
Improving protein structure similarity searches using domain boundaries based on conserved sequence information.
PMID:19454035
Isolation and characterization of NgRLK1, a receptor-like kinase of Nicotiana glutinosa that interacts with the elicitin of Phytophthora capsici.
PMID:19449126
Structure and function of Vps15 in the endosomal G protein signaling pathway.
PMID:19445518
Solution structure of factor I-like modules from complement C7 reveals a pair of follistatin domains in compact pseudosymmetric arrangement.
PMID:19419965
AMR1, an Arabidopsis gene that coordinately and negatively regulates the mannose/l-galactose ascorbic acid biosynthetic pathway.
PMID:19395407
Schistosomin from the snail Biomphalaria glabrata: expression studies suggest no involvement in trematode-mediated castration.
PMID:19393164
The iC3b receptor of Candida albicans and its roles in pathogenesis.
PMID:19388174
Molecular identification and expression analysis of filaggrin-2, a member of the S100 fused-type protein family.
PMID:19384417
Phosphate-dependent behavior of the archaeon Halobacterium salinarum strain R1.
PMID:19363117
Bovine coronavirus nonstructural protein 1 (p28) is an RNA binding protein that binds terminal genomic cis-replication elements.
PMID:19357173
Spinal muscular atrophy and a model for survival of motor neuron protein function in axonal ribonucleoprotein complexes.
PMID:19343312
Characterization of the interaction between Actinin-Associated LIM Protein (ALP) and the rod domain of alpha-actinin.
PMID:19327143
Analyses of domains and domain fusions in human proto-oncogenes.
PMID:19292927
Structural conservation of a short, functional, peptide-sequence motif.
PMID:19273121
Characterization of the Drosophila ortholog of the human Usher Syndrome type 1G protein sans.
PMID:19270738
Lipocalin signaling controls unicellular tube development in the Caenorhabditis elegans excretory system.
PMID:19269285
The sensor kinase TodS operates by a multiple step phosphorelay mechanism involving two autokinase domains.
PMID:19240030
Massively parallel sequencing identifies the gene Megf8 with ENU-induced mutation causing heterotaxy.
PMID:19218456
A novel leucine-rich repeat receptor-like kinase gene in potato, StLRPK1, is involved in response to diverse stresses.
PMID:19214776
Comparative genomics of phylogenetically diverse unicellular eukaryotes provide new insights into the genetic basis for the evolution of the programmed cell death machinery.
PMID:19209377
A split and rearranged nuclear gene encoding the iron-sulfur subunit of mitochondrial succinate dehydrogenase in Euglenozoa.
PMID:19192292
Identification of lympho-epithelial Kazal-type inhibitor 2 in human skin as a kallikrein-related peptidase 5-specific protease inhibitor.
PMID:19190773
Domain mobility in proteins: functional and evolutionary implications.
PMID:19151098
MYC-induced myeloid leukemogenesis is accelerated by all six members of the antiapoptotic BCL family.
PMID:19137012
Variant ionotropic glutamate receptors as chemosensory receptors in Drosophila.
PMID:19135896
Insight into the molecular requirements for pathogenicity of Fusarium oxysporum f. sp. lycopersici through large-scale insertional mutagenesis.
PMID:19134172
OxyGene: an innovative platform for investigating oxidative-response genes in whole prokaryotic genomes.
PMID:19117520
Efficient mitochondrial targeting relies on co-operation of multiple protein signals in plants.
PMID:19112171
Association rate constants of ras-effector interactions are evolutionarily conserved.
PMID:19096503
TrgI, toluene repressed gene I, a novel gene involved in toluene-tolerance in Pseudomonas putida S12.
PMID:19089528
Genetic analysis of crawling and swimming locomotory patterns in C. elegans.
PMID:19074276
Possible effects of microbial ecto-nucleoside triphosphate diphosphohydrolases on host-pathogen interactions.
PMID:19052327
The MYST histone acetyltransferases are essential for gametophyte development in Arabidopsis.
PMID:19040736
Genome and proteome annotation: organization, interpretation and integration.
PMID:19019817
Protein subfamily assignment using the Conserved Domain Database.
PMID:19014584
Conserved microsynteny of NPR1 with genes encoding a signal calmodulin-binding protein and a CK1-class protein kinase in Beta vulgaris and two other eudicots.
PMID:18989375
Evolution of GHF5 endoglucanase gene structure in plant-parasitic nematodes: no evidence for an early domain shuffling event.
PMID:18980666
SMART 6: recent updates and new developments.
PMID:18978020
Identification of a 2 Mb human ortholog of Drosophila eyes shut/spacemaker that is mutated in patients with retinitis pigmentosa.
PMID:18976725
Bridging the synaptic gap: neuroligins and neurexin I in Apis mellifera.
PMID:18974885
ATP/ADP binding to a novel nucleotide binding domain of the reticulocyte-binding protein Py235 of Plasmodium yoelii.
PMID:18957411
A Drosophila protein family implicated in pheromone perception is related to Tay-Sachs GM2-activator protein.
PMID:18952610
Evolutionary history of histone demethylase families: distinct evolutionary patterns suggest functional divergence.
PMID:18950507
Molecular modeling of the three-dimensional structure of GLP-1R and its interactions with several agonists.
PMID:18941807
Structural analysis of the interactions between paxillin LD motifs and alpha-parvin.
PMID:18940607
Proteomics-based identification of novel factor inhibiting hypoxia-inducible factor (FIH) substrates indicates widespread asparaginyl hydroxylation of ankyrin repeat domain-containing proteins.
PMID:18936059
The YvfTU two-component system is involved in plcR expression in Bacillus cereus.
PMID:18925929
C2 domain protein MIN1 promotes eyespot organization in Chlamydomonas reinhardtii.
PMID:18849467
Discovering functional novelty in metagenomes: examples from light-mediated processes.
PMID:18849420
Origins and evolution of the formin multigene family that is involved in the formation of actin filaments.
PMID:18840602
Arabidopsis iba response5 suppressors separate responses to various hormones.
PMID:18832358
Genome-wide identification, organization and phylogenetic analysis of Dicer-like, Argonaute and RNA-dependent RNA Polymerase gene families and their expression analysis during reproductive development and stress in rice.
PMID:18826656
Cloning, characterisation and comparative analysis of a starch synthase IV gene in wheat: functional and evolutionary implications.
PMID:18826586
Tet 42, a novel tetracycline resistance determinant isolated from deep terrestrial subsurface bacteria.
PMID:18809935
NetGrep: fast network schema searches in interactomes.
PMID:18801179
Comprehensive survey and classification of homeobox genes in the genome of amphioxus, Branchiostoma floridae.
PMID:18797923
Gene organization, evolution and expression of the microtubule-associated protein ASAP (MAP9).
PMID:18782428
ADAM15 modulates outside-in signalling in chondrocyte-matrix interactions.
PMID:18774960
Novel role of the muskelin-RanBP9 complex as a nucleocytoplasmic mediator of cell morphology regulation.
PMID:18710924
Cad74A is regulated by BR and is required for robust dorsal appendage formation in Drosophila oogenesis.
PMID:18708045
Molecular cloning, characterization and mRNA expression of peroxiredoxin in Zhikong scallop Chlamys farreri.
PMID:18704754
Demosponge and sea anemone fibrillar collagen diversity reveals the early emergence of A/C clades and the maintenance of the modular structure of type V/XI collagens from sponge to human.
PMID:18697744
Validating annotations for uncharacterized proteins in Shewanella oneidensis.
PMID:18687039
Powerful fusion: PSI-BLAST and consensus sequences.
PMID:18678588
High-throughput analysis of the protein sequence-stability landscape using a quantitative yeast surface two-hybrid system and fragment reconstitution.
PMID:18674545
From drought sensing to developmental control: evolution of cyclic AMP signaling in social amoebas.
PMID:18640994
Caenorhabditis elegans gelsolin-like protein 1 is a novel actin filament-severing protein with four gelsolin-like repeats.
PMID:18640981
The cadherin superfamily in Anopheles gambiae: a comparative study with Drosophila melanogaster.
PMID:18629193
Protein-DNA interactions: the story so far and a new method for prediction.
PMID:18629075
Adaptive evolution of SCML1 in primates, a gene involved in male reproduction.
PMID:18601738
Novel type of Ras effector interaction established between tumour suppressor NORE1A and Ras switch II.
PMID:18596699
Therapeutic use of PDZ protein-protein interaction antagonism.
PMID:18560611
Isolation and characterization of major histocompatibility complex (MHC) class II B genes in the Barn owl (Aves: Tyto alba).
PMID:18548243
Deciphering the ubiquitin-mediated pathway in apicomplexan parasites: a potential strategy to interfere with parasite virulence.
PMID:18545708
WDR1 presence in the songbird basilar papilla.
PMID:18514449
Whole genome identification of Mycobacterium tuberculosis vaccine candidates by comprehensive data mining and bioinformatic analyses.
PMID:18505592
The small ubiquitin-like modifier (SUMO) and SUMO-conjugating system of Chlamydomonas reinhardtii.
PMID:18493050
Omp85(Tt) from Thermus thermophilus HB27: an ancestral type of the Omp85 protein family.
PMID:18456816
Identification of woolliness response genes in peach fruit after post-harvest treatments.
PMID:18453640
Global consequences of phosphatidylcholine reduction in Bradyrhizobium japonicum.
PMID:18446372
The Nod-like receptor (NLR) family: a tale of similarities and differences.
PMID:18446235
HDP-a novel heme detoxification protein from the malaria parasite.
PMID:18437218
Roots of angiosperm formins: the evolutionary history of plant FH2 domain-containing proteins.
PMID:18430232
Overview of protein structural and functional folds.
PMID:18429251
Prediction of phosphotyrosine signaling networks using a scoring matrix-assisted ligand identification approach.
PMID:18424801
Fibrinogen-bearing protein genes in the snail Biomphalaria glabrata: characterization of two novel genes and expression studies during ontogenesis and trematode infection.
PMID:18417215
The genome of the brown alga Ectocarpus siliculosus contains a series of viral DNA pieces, suggesting an ancient association with large dsDNA viruses.
PMID:18405387
Intracellular cholesterol transporter StarD4 binds free cholesterol and increases cholesteryl ester formation.
PMID:18403318
Enzymatic mechanism and product specificity of SET-domain protein lysine methyltransferases.
PMID:18391193
EspA, an orphan hybrid histidine protein kinase, regulates the timing of expression of key developmental proteins of Myxococcus xanthus.
PMID:18390653
The RGS gene loco is essential for male reproductive system differentiation in Drosophila melanogaster.
PMID:18387173
TarO: a target optimisation system for structural biology.
PMID:18385152
Characterization of Drosophila melanogaster JmjC+N histone demethylases.
PMID:18375980
The Plasmodium TRAP/MIC2 family member, TRAP-Like Protein (TLP), is involved in tissue traversal by sporozoites.
PMID:18346224
Characterisation of 3' transgene insertion site and derived mRNAs in MON810 YieldGard maize.
PMID:18306044
Developmentally regulated expression, alternative splicing and distinct sub-groupings in members of the Schistosoma mansoni venom allergen-like (SmVAL) gene family.
PMID:18294395
Both the N-terminal fragment and the protein-protein interaction domain (PDZ domain) are required for the pro-apoptotic activity of presenilin-associated protein PSAP.
PMID:18291114
Three thioesterases are involved in the biosynthesis of phosphinothricin tripeptide in Streptomyces viridochromogenes Tü494.
PMID:18285472
Annotation and expression profiling of apoptosis-related genes in the yellow fever mosquito, Aedes aegypti.
PMID:18252247
The Caenorhabditis elegans ekl (enhancer of ksr-1 lethality) genes include putative components of a germline small RNA pathway.
PMID:18245826
Genome-wide survey and developmental expression mapping of zebrafish SET domain-containing genes.
PMID:18231586
SUMO-conjugating enzyme (Sce) and FK506-binding protein (FKBP) encoding rice (Oryza sativa L.) genes: genome-wide analysis, expression studies and evidence for their involvement in abiotic stress response.
PMID:18219493
The genome of Pelotomaculum thermopropionicum reveals niche-associated evolution in anaerobic microbiota.
PMID:18218977
Alternative splicing and differential subcellular localization of the rat FGF antisense gene product.
PMID:18215310
Sequence comparison of the right end of fowl adenovirus genomes.
PMID:18204967
Different effects of Tetrahymena IFT172 domains on anterograde and retrograde intraflagellar transport.
PMID:18199688
Functional-genomics-based identification and characterization of open reading frames encoding alpha-glucoside-processing enzymes in the hyperthermophilic archaeon Pyrococcus furiosus.
PMID:18156337
Compensatory evolution of a WW domain variant lacking the strictly conserved Trp residue.
PMID:18087661
CATHEDRAL: a fast and effective algorithm to predict folds and domain boundaries from multidomain protein structures.
PMID:18052539
CancerLectinDB: a database of lectins relevant to cancer.
PMID:18038206
Novel Ist1-Did2 complex functions at a late step in multivesicular body sorting.
PMID:18032584
Phycobilisomes linker family in cyanobacterial genomes: divergence and evolution.
PMID:18026567
The Firegoose: two-way integration of diverse data from different bioinformatics web resources with desktop applications.
PMID:18021453
Bioinformatics and experimental analysis of proteins of two-component systems in Myxococcus xanthus.
PMID:17993514
Smy2p participates in COPII vesicle formation through the interaction with Sec23p/Sec24p subcomplex.
PMID:17973654
Genome-wide survey of putative serine/threonine protein kinases in cyanobacteria.
PMID:17971218
Evidence of a bactericidal permeability increasing protein in an invertebrate, the Crassostrea gigas Cg-BPI.
PMID:17965238
The origins and early evolution of DNA mismatch repair genes--multiple horizontal gene transfers and co-evolution.
PMID:17965091
MIDGET unravels functions of the Arabidopsis topoisomerase VI complex in DNA endoreduplication, chromatin condensation, and transcriptional silencing.
PMID:17951446
Sequence characterization and comparative analysis of three plasmids isolated from environmental Vibrio spp.
PMID:17921277
Vestigial-like-2b (VITO-1b) and Tead-3a (Tef-5a) expression in zebrafish skeletal muscle, brain and notochord.
PMID:17916448
Reassessment of the in vivo functions of DNA polymerase I and RNase H in bacterial cell growth.
PMID:17905985
PDZ protein interactions underlying NMDA receptor-mediated excitotoxicity and neuroprotection by PSD-95 inhibitors.
PMID:17855605
A conserved gene family encodes transmembrane proteins with fibronectin, immunoglobulin and leucine-rich repeat domains (FIGLER).
PMID:17854505
New insights into the WalK/WalR (YycG/YycF) essential signal transduction pathway reveal a major role in controlling cell wall metabolism and biofilm formation in Staphylococcus aureus.
PMID:17827301
Characterization of immune genes from the schistosome host snail Biomphalaria glabrata that encode peptidoglycan recognition proteins and gram-negative bacteria binding protein.
PMID:17805526
Nectin-like proteins mediate axon Schwann cell interactions along the internode and are essential for myelination.
PMID:17724124
PDZ domain binding selectivity is optimized across the mouse proteome.
PMID:17641200
MADS-box gene family in rice: genome-wide identification, organization and expression profiling during reproductive development and stress.
PMID:17640358
Molecular cloning and analysis of zebrafish voltage-gated sodium channel beta subunit genes: implications for the evolution of electrical signaling in vertebrates.
PMID:17623065
The plant pathogen Ralstonia solanacearum needs aerotaxis for normal biofilm formation and interactions with its tomato host.
PMID:17601784
Analysis of septins across kingdoms reveals orthology and new motifs.
PMID:17601340
Human SFMBT is a transcriptional repressor protein that selectively binds the N-terminal tail of histone H3.
PMID:17599839
Evidence of amino acid diversity-enhancing selection within humans and among primates at the candidate sperm-receptor gene PKDREJ.
PMID:17564962
A post-synaptic scaffold at the origin of the animal kingdom.
PMID:17551586
Chloroplast His-to-Asp signal transduction: a potential mechanism for plastid gene regulation in Heterosigma akashiwo (Raphidophyceae).
PMID:17477873
PI3K is negatively regulated by PIK3IP1, a novel p110 interacting protein.
PMID:17475214
Flavodoxin:quinone reductase (FqrB): a redox partner of pyruvate:ferredoxin oxidoreductase that reversibly couples pyruvate oxidation to NADPH production in Helicobacter pylori and Campylobacter jejuni.
PMID:17468253
Variability and expression of ankyrin domain genes in Wolbachia variants infecting the mosquito Culex pipiens.
PMID:17449622
The nuclear-encoded factor HCF173 is involved in the initiation of translation of the psbA mRNA in Arabidopsis thaliana.
PMID:17435084
A kingdom-specific protein domain HMM library for improved annotation of fungal genomes.
PMID:17425790
Genome sequence of the cellulolytic gliding bacterium Cytophaga hutchinsonii.
PMID:17400776
Complex regulation and multiple developmental functions of misfire, the Drosophila melanogaster ferlin gene.
PMID:17386097
Structure of PICK1 and other PDZ domains obtained with the help of self-binding C-terminal extensions.
PMID:17384233
Consensus sequences improve PSI-BLAST through mimicking profile-profile alignments.
PMID:17369271
Membrane protein prediction methods.
PMID:17367718
Signal transduction-related responses to phytohormones and environmental challenges in sugarcane.
PMID:17355627
Central roles of small GTPases in the development of cell polarity in yeast and beyond.
PMID:17347519
Nutrient-responsive mTOR signalling grows on Sterile ground.
PMID:17346240
DmOAZ, the unique Drosophila melanogaster OAZ homologue is involved in posterior spiracle development.
PMID:17323106
Association of six YFP-myosin XI-tail fusions with mobile plant cell organelles.
PMID:17288617
Insights into the molecular evolution of the PDZ/LIM family and identification of a novel conserved protein motif.
PMID:17285143
ArhGAP9, a novel MAP kinase docking protein, inhibits Erk and p38 activation through WW domain binding.
PMID:17284314
Conservation of the TRAPPII-specific subunits of a Ypt/Rab exchanger complex.
PMID:17274825
Identification and characterization of human Mex-3 proteins, a novel family of evolutionarily conserved RNA-binding proteins differentially localized to processing bodies.
PMID:17267406
Functional overlap between conserved and diverged KH domains in Saccharomyces cerevisiae SCP160.
PMID:17264125
Characterization of scavenger receptor class B, type I in Atlantic salmon (Salmo salar L.).
PMID:17263301
The SRA methyl-cytosine-binding domain links DNA and histone methylation.
PMID:17239600
The dystrotelin, dystrophin and dystrobrevin superfamily: new paralogues and old isoforms.
PMID:17233888
Identification of new members of hydrophobin family using primary structure analysis.
PMID:17217508
Unique SARS-CoV protein nsp1: bioinformatics, biochemistry and potential effects on virulence.
PMID:17207625
TPRpred: a tool for prediction of TPR-, PPR- and SEL1-like repeats from protein sequences.
PMID:17199898
The alliance for cellular signaling plasmid collection: a flexible resource for protein localization studies and signaling pathway analysis.
PMID:17192258
Atomic model of human Rcd-1 reveals an armadillo-like-repeat protein with in vitro nucleic acid binding properties.
PMID:17189474
Fine-tuning of protein domain boundary by minimizing potential coiled coil regions.
PMID:17180444
Stimulus perception in bacterial signal-transducing histidine kinases.
PMID:17158704
A ferroxidation/permeation iron uptake system is required for virulence in Ustilago maydis.
PMID:17138696
Molecular characterization of coding sequences and analysis of Toll-like receptor 3 mRNA expression in water buffalo (Bubalus bubalis) and nilgai (Boselaphus tragocamelus).
PMID:17119952
Structural modeling of protein interactions by analogy: application to PSD-95.
PMID:17096593
Tracing the origin of functional and conserved domains in the human proteome: implications for protein evolution at the modular level.
PMID:17090320
Thermal stabilities of brain spectrin and the constituent repeats of subunits.
PMID:17087521
Molecular and phylogenetic analyses reveal mammalian-like clockwork in the honey bee (Apis mellifera) and shed new light on the molecular evolution of the circadian clock.
PMID:17065608
EMB-4: a predicted ATPase that facilitates lin-12 activity in Caenorhabditis elegans.
PMID:17030954
PDZ-domain-binding sites are common among cadherins.
PMID:17021864
The Rcs phosphorelay system is specific to enteric pathogens/commensals and activates ydeI, a gene important for persistent Salmonella infection of mice.
PMID:17010160
Posttranslational hydroxylation of ankyrin repeats in IkappaB proteins by the hypoxia-inducible factor (HIF) asparaginyl hydroxylase, factor inhibiting HIF (FIH).
PMID:17003112
Identification and characterization of a novel ABC iron transport system, fit, in Escherichia coli.
PMID:16982838
PhyloFacts: an online structural phylogenomic encyclopedia for protein functional and structural classification.
PMID:16973001
Carotenoid biosynthesis in cyanobacteria: structural and evolutionary scenarios based on comparative genomics.
PMID:16967101
High degree of conservancy among secreted salivary gland proteins from two geographically distant Phlebotomus duboscqi sandflies populations (Mali and Kenya).
PMID:16952314
Isolation and characterisation of two wheat beta-expansin genes expressed during male gametophyte development.
PMID:16937050
Cell envelope stress response in Bacillus licheniformis: integrating comparative genomics, transcriptional profiling, and regulon mining to decipher a complex regulatory network.
PMID:16936031
Identification and characterization of a novel human dysferlin transcript: dysferlin_v1.
PMID:16896923
Does WAVE1 contain a GoLoco/GPR motif?
PMID:16896366
Genome-wide analysis of basic/helix-loop-helix transcription factor family in rice and Arabidopsis.
PMID:16896230
Phylogenetic analysis of the tenascin gene family: evidence of origin early in the chordate lineage.
PMID:16893461
Analysis of Nanoarchaeum equitans genome and proteome composition: indications for hyperthermophilic and parasitic adaptation.
PMID:16869956
Novel calcium-binding GTPase (AtCBG) involved in ABA-mediated salt stress signaling in Arabidopsis.
PMID:16832621
Cloning, chromosome mapping and expression analysis of an R2R3-MYB gene under-expressed in maize hybrid.
PMID:16817019
Regulation of LiaRS-dependent gene expression in bacillus subtilis: identification of inhibitor proteins, regulator binding sites, and target genes of a conserved cell envelope stress-sensing two-component system.
PMID:16816187
Identification of putative domain linkers by a neural network - application to a large sequence database.
PMID:16800897
A WD-FYVE protein binds to the kinases Akt and PKCzeta/lambda.
PMID:16792529
The novel Helicobacter pylori CznABC metal efflux pump is required for cadmium, zinc, and nickel resistance, urease modulation, and gastric colonization.
PMID:16790756
The Escherichia coli proteome: past, present, and future prospects.
PMID:16760308
The orphan response regulator DigR is required for synthesis of extracellular matrix fibrils in Myxococcus xanthus.
PMID:16740945
Evidence from bioinformatics, expression and inhibition studies of phosphoinositide-3 kinase signalling in Giardia intestinalis.
PMID:16707026
An adhesion molecule in free-living Dictyostelium amoebae with integrin beta features.
PMID:16699495
Phylogenomic analysis of vertebrate thrombospondins reveals fish-specific paralogues, ancestral gene relationships and a tetrapod innovation.
PMID:16620379
Purification of active HOPS complex reveals its affinities for phosphoinositides and the SNARE Vam7p.
PMID:16601699
Disruption of the A-kinase anchoring domain in flagellar radial spoke protein 3 results in unregulated axonemal cAMP-dependent protein kinase activity and abnormal flagellar motility.
PMID:16571668
Identification of RamA, a novel LuxR-type transcriptional regulator of genes involved in acetate metabolism of Corynebacterium glutamicum.
PMID:16547043
Comparative salivary gland transcriptomics of sandfly vectors of visceral leishmaniasis.
PMID:16539713
The E3 ubiquitin ligase activity of arabidopsis PLANT U-BOX17 and its functional tobacco homolog ACRE276 are required for cell death and defense.
PMID:16531496
The U-box protein CMPG1 is required for efficient activation of defense mechanisms triggered by multiple resistance genes in tobacco and tomato.
PMID:16531490
Duplication and relocation of the functional DPY19L2 gene within low copy repeats.
PMID:16526957
Structure of a conserved hypothetical protein, TTHA0849 from Thermus thermophilus HB8, at 2.4 A resolution: a putative member of the StAR-related lipid-transfer (START) domain superfamily.
PMID:16511226
Structural and functional insights into the B30.2/SPRY domain.
PMID:16498413
The chicken immunoregulatory receptor families SIRP, TREM, and CMRF35/CD300L.
PMID:16493555
Binding specificity of Toll-like receptor cytoplasmic domains.
PMID:16482509
Characterization of cDNAs encoding two distinct miraculin-like proteins and stress-related modulation of the corresponding mRNAs in Citrus jambhiri lush.
PMID:16463104
Comprehensive comparative analysis of kinesins in photosynthetic eukaryotes.
PMID:16448571
Hierarchical clustering algorithm for comprehensive orthologous-domain classification in multiple genomes.
PMID:16436801
The Epc-N domain: a predicted protein-protein interaction domain found in select chromatin associated proteins.
PMID:16412250
SST2, a regulator of G-protein signaling for the Candida albicans mating response pathway.
PMID:16400182
In vitro alginate polymerization and the functional role of Alg8 in alginate production by Pseudomonas aeruginosa.
PMID:16391057
A Plasmodium whole-genome synteny map: indels and synteny breakpoints as foci for species-specific genes.
PMID:16389297
Mutations in TRIOBP, which encodes a putative cytoskeletal-organizing protein, are associated with nonsyndromic recessive deafness.
PMID:16385457
SMART 5: domains in the context of genomes and networks.
PMID:16381859
Systematic genome-wide annotation of spliceosomal proteins reveals differential gene family expansion.
PMID:16344558
Expression and evolutionary analysis of West Nile virus (Merion strain).
PMID:16338748
Nucleoporins NPP-1, NPP-3, NPP-4, NPP-11 and NPP-13 are required for proper spindle orientation in C. elegans.
PMID:16325795
Relationship between SPRY and B30.2 protein domains. Evolution of a component of immune defence?
PMID:16313355
The EH1 motif in metazoan transcription factors.
PMID:16309560
Expression and genomic organization of zonadhesin-like genes in three species of fish give insight into the evolutionary history of a mosaic protein.
PMID:16303057
A wound-responsive and phospholipid-regulated maize calcium-dependent protein kinase.
PMID:16299185
Four unusual two-component signal transduction homologs, RedC to RedF, are necessary for timely development in Myxococcus xanthus.
PMID:16291693
Identification and functional characterization of Arabidopsis PEROXIN4 and the interacting protein PEROXIN22.
PMID:16272432
Identifying components of the NF-kappaB pathway in the beneficial Euprymna scolopes-Vibrio fischeri light organ symbiosis.
PMID:16269728
Structure of the split PH domain and distinct lipid-binding properties of the PH-PDZ supramodule of alpha-syntrophin.
PMID:16252003
Sequence analysis of Arabidopsis thaliana E/ANTH-domain-containing proteins: membrane tethers of the clathrin-dependent vesicle budding machinery.
PMID:16231097
spe-10 encodes a DHHC-CRD zinc-finger membrane protein required for endoplasmic reticulum/Golgi membrane morphogenesis during Caenorhabditis elegans spermatogenesis.
PMID:16143610
Variation in structural location and amino acid conservation of functional sites in protein domain families.
PMID:16122386
Methylation of histone H3 lysine 36 is required for normal development in Neurospora crassa.
PMID:16087750
Characterization of Toll-like receptor 3 gene in rainbow trout (Oncorhynchus mykiss).
PMID:16086174
The influence of acetyl phosphate on DspA signalling in the Cyanobacterium Synechocystis sp. PCC6803.
PMID:16076400
PfPDE1, a novel cGMP-specific phosphodiesterase from the human malaria parasite Plasmodium falciparum.
PMID:16038615
Distribution, expression, and motif variability of ankyrin domain genes in Wolbachia pipientis.
PMID:16030207
DCD - a novel plant specific domain in proteins involved in development and programmed cell death.
PMID:16008837
Interactions between Mad1p and the nuclear transport machinery in the yeast Saccharomyces cerevisiae.
PMID:16000377
Activation of a nuclear Cdc2-related kinase within a mitogen-activated protein kinase-like TDY motif by autophosphorylation and cyclin-dependent protein kinase-activating kinase.
PMID:15988018
REPPER--repeats and their periodicities in fibrous proteins.
PMID:15980460
Activities of the Serratia marcescens heme receptor HasR and isolated plug and beta-barrel domains: the beta-barrel forms a heme-specific channel.
PMID:15968075
Epimerase active domain of Pseudomonas aeruginosa AlgG, a protein that contains a right-handed beta-helix.
PMID:15968068
Genetic deletion of murine SPRY domain-containing SOCS box protein 2 (SSB-2) results in very mild thrombocytopenia.
PMID:15964819
AutoFACT: an automatic functional annotation and classification tool.
PMID:15960857
A census of membrane-bound and intracellular signal transduction proteins in bacteria: bacterial IQ, extroverts and introverts.
PMID:15955239
Characterization of a nucleus-encoded chitinase from the yeast Kluyveromyces lactis.
PMID:15932978
A multidomain fusion protein in Listeria monocytogenes catalyzes the two primary activities for glutathione biosynthesis.
PMID:15901709
Regulation of mtrF expression in Neisseria gonorrhoeae and its role in high-level antimicrobial resistance.
PMID:15901695
Expression of functional recombinant von Willebrand factor-A domain from human complement C2: a potential binding site for C4 and CRIT.
PMID:15823096
The complex developmental expression of a novel stress-responsive barley Ltp gene is determined by a shortened promoter sequence.
PMID:15821867
A novel firmicute protein family related to the actinobacterial resuscitation-promoting factors by non-orthologous domain displacement.
PMID:15774001
A comparative sequence analysis reveals a common GBD/FH3-FH1-FH2-DAD architecture in formins from Dictyostelium, fungi and metazoa.
PMID:15740615
Structure and mechanism of ADP-ribose-1''-monophosphatase (Appr-1''-pase), a ubiquitous cellular processing enzyme.
PMID:15722447
Pseudomonas aeruginosa fimL regulates multiple virulence functions by intersecting with Vfr-modulated pathways.
PMID:15720546
The PECACE domain: a new family of enzymes with potential peptidoglycan cleavage activity in Gram-positive bacteria.
PMID:15717932
Regulation of K-Cl cotransport: from function to genes.
PMID:15711773
Positive and negative regulation of c-Myb by cyclin D1, cyclin-dependent kinases, and p27 Kip1.
PMID:15687240
Functional analysis of the inhibitor of apoptosis (iap) gene carried by the entomopoxvirus of Amsacta moorei.
PMID:15681434
Overexpression of transcripts originating from the MMSET locus characterizes all t(4;14)(p16;q32)-positive multiple myeloma patients.
PMID:15677557
H2B ubiquitin protease Ubp8 and Sgf11 constitute a discrete functional module within the Saccharomyces cerevisiae SAGA complex.
PMID:15657441
The WD40 repeat protein fritz links cytoskeletal planar polarity to frizzled subcellular localization in the Drosophila epidermis.
PMID:15654087
Cyclic nucleotide binding proteins in the Arabidopsis thaliana and Oryza sativa genomes.
PMID:15644130
Role for RNA-binding proteins implicated in pathogenic development of Ustilago maydis.
PMID:15643068
The path to enlightenment: making sense of genomic and proteomic information.
PMID:15629052
Construction of a non-redundant human SH2 domain database.
PMID:15629051
Generation and analysis of expressed sequence tags from the salt-tolerant mangrove species Avicennia marina (Forsk) Vierh.
PMID:15609053
GenDiS: Genomic Distribution of protein structural domain Superfamilies.
PMID:15608190
Sequence analysis of the glycoproteins of Tomato chlorotic spot virus and Groundnut ringspot virus and comparison with other tospoviruses.
PMID:15550772
Identification of a panel of tumor-associated antigens from breast carcinoma cell lines, solid tumors and testis cDNA libraries displayed on lambda phage.
PMID:15541172
Hydrophobic interactions drive ligand-receptor recognition for activation and inhibition of staphylococcal quorum sensing.
PMID:15528279
Interactions between the PAS and HAMP domains of the Escherichia coli aerotaxis receptor Aer.
PMID:15489456
Introns and splicing elements of five diverse fungi.
PMID:15470237
Evidence for serine/threonine and histidine kinase activity in the tobacco ethylene receptor protein NTHK2.
PMID:15466243
PAS domain of the Aer redox sensor requires C-terminal residues for native-fold formation and flavin adenine dinucleotide binding.
PMID:15466030
Alternative splicing of mouse transcription factors affects their DNA-binding domain architecture and is tissue specific.
PMID:15461794
The transcriptional program of synchronous gametogenesis in Chlamydomonas reinhardtii.
PMID:15459796
Drosophila citron kinase is required for the final steps of cytokinesis.
PMID:15371536
Automatic annotation of protein motif function with Gene Ontology terms.
PMID:15345032
Sequestosome 1/p62 is a polyubiquitin chain binding protein involved in ubiquitin proteasome degradation.
PMID:15340068
MUSCLE: a multiple sequence alignment method with reduced time and space complexity.
PMID:15318951
Formin homology 2 domains occur in multiple contexts in angiosperms.
PMID:15256004
Evidence that the algI/algJ gene cassette, required for O acetylation of Pseudomonas aeruginosa alginate, evolved by lateral gene transfer.
PMID:15231808
The MB2 gene family of Plasmodium species has a unique combination of S1 and GTP-binding domains.
PMID:15222903
Human septin-septin interactions as a prerequisite for targeting septin complexes in the cytosol.
PMID:15214843
Sequence and organization of the Neodiprion lecontei nucleopolyhedrovirus genome.
PMID:15194779
Homing endonucleases encoded by germ line-limited genes in Tetrahymena thermophila have APETELA2 DNA binding domains.
PMID:15189989
Interaction profile-based protein classification of death domain.
PMID:15189571
Type-B response regulators display overlapping expression patterns in Arabidopsis.
PMID:15173562
Proteomic analysis of interchromatin granule clusters.
PMID:15169873
The ankyrin repeat as molecular architecture for protein recognition.
PMID:15152081
IRI-1, a LIN-15B homologue, interacts with inositol-1,4,5-triphosphate receptors and regulates gonadogenesis, defecation, and pharyngeal pumping in Caenorhabditis elegans.
PMID:15133127
Regulation of photosynthesis genes in Rubrivivax gelatinosus: transcription factor PpsR is involved in both negative and positive control.
PMID:15126475
Short amino acid stretches can mediate amyloid formation in globular proteins: the Src homology 3 (SH3) case.
PMID:15123800
Denaturation of replication protein A reveals an alternative conformation with intact domain structure and oligonucleotide binding activity.
PMID:15096638
RamB, a novel transcriptional regulator of genes involved in acetate metabolism of Corynebacterium glutamicum.
PMID:15090522
Molecular analysis of muskelin identifies a conserved discoidin-like domain that contributes to protein self-association.
PMID:15084145
Cell cycle-dependent dynamic localization of a bacterial response regulator with a novel di-guanylate cyclase output domain.
PMID:15075296
Bietti crystalline corneoretinal dystrophy is caused by mutations in the novel gene CYP4V2.
PMID:15042513
MUSCLE: multiple sequence alignment with high accuracy and high throughput.
PMID:15034147
Genome-wide identification of NBS genes in japonica rice reveals significant expansion of divergent non-TIR NBS-LRR genes.
PMID:15014983
NMR assignment of the hypothetical ENTH-VHS domain At3g16270 from Arabidopsis thaliana.
PMID:15014234
A novel virulence gene in Klebsiella pneumoniae strains causing primary liver abscess and septic metastatic complications.
PMID:14993253
Comparative analysis of protein domain organization.
PMID:14993202
A functional polymeric immunoglobulin receptor in chicken (Gallus gallus) indicates ancient role of secretory IgA in mucosal immunity.
PMID:14992684
Protein structure prediction for the male-specific region of the human Y chromosome.
PMID:14983005
A virulence factor of myxoma virus colocalizes with NF-kappaB in the nucleus and interferes with inflammation.
PMID:14963153
Identification of genes controlled by the essential YycG/YycF two-component system of Staphylococcus aureus.
PMID:14762013
A comprehensive evolutionary classification of proteins encoded in complete eukaryotic genomes.
PMID:14759257
An Arabidopsis indole-3-butyric acid-response mutant defective in PEROXIN6, an apparent ATPase implicated in peroxisomal function.
PMID:14745029
Phylogenetic analysis of Sec7-domain-containing Arf nucleotide exchangers.
PMID:14742722
Analysis of the lambdoid prophage element e14 in the E. coli K-12 genome.
PMID:14733619
Cloning of a novel signaling molecule, AMSH-2, that potentiates transforming growth factor beta signaling.
PMID:14728725
Identification of a novel gene family that includes the interferon-inducible human genes 6-16 and ISG12.
PMID:14728724
Adenylyl cyclase G is activated by an intramolecular osmosensor.
PMID:14718564
The HWE histidine kinases, a new family of bacterial two-component sensor kinases with potentially diverse roles in environmental signaling.
PMID:14702314
Interaxonal Eph-ephrin signaling may mediate sorting of olfactory sensory axons in Manduca sexta.
PMID:14684856
Human protein reference database as a discovery resource for proteomics.
PMID:14681466
SMART 4.0: towards genomic data integration.
PMID:14681379
Characterization of the 101-kilobase-pair megaplasmid pKB1, isolated from the rubber-degrading bacterium Gordonia westfalica Kb1.
PMID:14679241
Investigation of protein export in Bifidobacterium breve UCC2003.
PMID:14660341
A novel beta-glucosidase in Uromyces fabae: feast or fight?
PMID:14648113
The bacterial adaptive response gene, barA, encodes a novel conserved histidine kinase regulatory switch for adaptation and modulation of metabolism in Escherichia coli.
PMID:14619967
Rabip4' is an effector of rab5 and rab4 and regulates transport through early endosomes.
PMID:14617813
Reannotation of the CELO genome characterizes a set of previously unassigned open reading frames and points to novel modes of host interaction in avian adenoviruses.
PMID:14604445
Novel membrane protein shrew-1 targets to cadherin-mediated junctions in polarized epithelial cells.
PMID:14595118
The product of a developmental gene, crgA, that coordinates reproductive growth in Streptomyces belongs to a novel family of small actinomycete-specific proteins.
PMID:14594842
Development of human protein reference database as an initial platform for approaching systems biology in humans.
PMID:14525934
Identifying biological themes within lists of genes with EASE.
PMID:14519205
Maintaining epithelial integrity: a function for gigantic spectraplakin isoforms in adherens junctions.
PMID:14517208
Complete genome sequence and analysis of Wolinella succinogenes.
PMID:14500908
Profile-profile comparisons by COMPASS predict intricate homologies between protein families.
PMID:14500884
Molecular phylogeny of the kelch-repeat superfamily reveals an expansion of BTB/kelch proteins in animals.
PMID:13678422
The COG database: an updated version includes eukaryotes.
PMID:12969510
PANTHER: a library of protein families and subfamilies indexed by function.
PMID:12952881
TodK, a putative histidine protein kinase, regulates timing of fruiting body morphogenesis in Myxococcus xanthus.
PMID:12949097
Prickle and Strabismus form a functional complex to generate a correct axis during planar cell polarity signaling.
PMID:12941693
Molecular modeling of the membrane targeting of phospholipase C pleckstrin homology domains.
PMID:12930993
Homology modeling provides insights into the binding mode of the PAAD/DAPIN/pyrin domain, a fourth member of the CARD/DD/DED domain family.
PMID:12930987
Target selection and determination of function in structural genomics.
PMID:12880206
Identification of two-component regulatory systems in Bifidobacterium infantis by functional complementation and degenerate PCR approaches.
PMID:12839803
Molecular and phylogenetic analyses of the complete MADS-box transcription factor family in Arabidopsis: new openings to the MADS world.
PMID:12837945
The cadherin superfamily database.
PMID:12836704
Identification and analysis of chromodomain-containing proteins encoded in the mouse transcriptome.
PMID:12819141
Impact of alternative initiation, splicing, and termination on the diversity of the mRNA transcripts encoded by the mouse transcriptome.
PMID:12819126
An argonaute-like protein is required for meiotic silencing.
PMID:12807800
Guanyl nucleotide exchange factor Sql2 and Ras2 regulate filamentous growth in Ustilago maydis.
PMID:12796306
Structural basis for SH3 domain-mediated high-affinity binding between Mona/Gads and SLP-76.
PMID:12773374
Using structural motif templates to identify proteins with DNA binding function.
PMID:12771208
Molecular characterization and analysis of the acrB gene of Aspergillus nidulans: a gene identified by genetic interaction as a component of the regulatory network that includes the CreB deubiquitination enzyme.
PMID:12750323
Mouse matriptase-2: identification, characterization and comparative mRNA expression analysis with mouse hepsin in adult and embryonic tissues.
PMID:12744720
A genomewide survey of developmentally relevant genes in Ciona intestinalis. I. Genes for bHLH transcription factors.
PMID:12736824
Evolution, biochemistry and genetics of protein kinase C in fungi.
PMID:12736758
Domain fusion analysis by applying relational algebra to protein sequence and domain databases.
PMID:12734020
Differentiation of varicella-zoster virus ORF47 protein kinase and IE62 protein binding domains and their contributions to replication in human skin xenografts in the SCID-hu mouse.
PMID:12719588
Control of triglyceride storage by a WD40/TPR-domain protein.
PMID:12717455
Mutations in MTMR13, a new pseudophosphatase homologue of MTMR2 and Sbf1, in two families with an autosomal recessive demyelinating form of Charcot-Marie-Tooth disease associated with early-onset glaucoma.
PMID:12687498
Autoinhibition of Jak2 tyrosine kinase is dependent on specific regions in its pseudokinase domain.
PMID:12686600
Proteolytic cleavage of PDZD2 generates a secreted peptide containing two PDZ domains.
PMID:12671685
Genome-wide analysis of NBS-LRR-encoding genes in Arabidopsis.
PMID:12671079
Regulation of myotubularin-related (MTMR)2 phosphatidylinositol phosphatase by MTMR5, a catalytically inactive phosphatase.
PMID:12668758
The structural basis for biphasic kinetics in the folding of the WW domain from a formin-binding protein: lessons for protein design?
PMID:12655041
Prediction of the prototype of the human Toll-like receptor gene family from the pufferfish, Fugu rubripes, genome.
PMID:12618912
Integrin beta cytoplasmic domain interactions with phosphotyrosine-binding domains: a structural prototype for diversity in integrin signaling.
PMID:12606711
Structure and function of the PWI motif: a novel nucleic acid-binding domain that facilitates pre-mRNA processing.
PMID:12600940
WW domain sequence activity relationships identified using ligand recognition propensities of 42 WW domains.
PMID:12592019
Structural basis of adhesion-molecule recognition by ERM proteins revealed by the crystal structure of the radixin-ICAM-2 complex.
PMID:12554651
Vibrio cholerae cytolysin is composed of an alpha-hemolysin-like core.
PMID:12538902
PANTHER: a browsable database of gene products organized by biological function, using curated protein family and subfamily classification.
PMID:12520017
Mechanism of histone lysine methyl transfer revealed by the structure of SET7/9-AdoMet.
PMID:12514135
Molecular and biochemical characterization of the thermoactive family 1 pectate lyase from the hyperthermophilic bacterium Thermotoga maritima.
PMID:12443532
Search for potential vaccine candidate open reading frames in the Bacillus anthracis virulence plasmid pXO1: in silico and in vitro screening.
PMID:12438358
FunSpec: a web-based cluster interpreter for yeast.
PMID:12431279
Identification of a novel type of cGMP phosphodiesterase that is defective in the chemotactic stmF mutants.
PMID:12429831
Dynamic interaction of CD2 with the GYF and the SH3 domain of compartmentalized effector molecules.
PMID:12426371
Identification by RNA profiling and mutational analysis of the novel copper resistance determinants CrdA (HP1326), CrdB (HP1327), and CzcB (HP1328) in Helicobacter pylori.
PMID:12426358
The nitrate reductase and nitrite reductase operons and the narT gene of Staphylococcus carnosus are positively controlled by the novel two-component system NreBC.
PMID:12426351
Genetic analysis and functional characterization of the Streptococcus pneumoniae vic operon.
PMID:12379689
SHORT INTEGUMENTS1/SUSPENSOR1/CARPEL FACTORY, a Dicer homolog, is a maternal effect gene required for embryo development in Arabidopsis.
PMID:12376646
A death-associated protein kinase (DAPK)-interacting protein, DIP-1, is an E3 ubiquitin ligase that promotes tumor necrosis factor-induced apoptosis and regulates the cellular levels of DAPK.
PMID:12351649
The TC10-interacting protein CIP4/2 is required for insulin-stimulated Glut4 translocation in 3T3L1 adipocytes.
PMID:12242347
NEAT: a domain duplicated in genes near the components of a putative Fe3+ siderophore transporter from Gram-positive pathogenic bacteria.
PMID:12225586
Genome-wide detection of tissue-specific alternative splicing in the human transcriptome.
PMID:12202761
Molecular cloning and functional expression of the rat 175-kDa hyaluronan receptor for endocytosis.
PMID:12181351
The rhodanese/Cdc25 phosphatase superfamily. Sequence-structure-function relations.
PMID:12151332
Cluster II che genes from Pseudomonas aeruginosa are required for an optimal chemotactic response.
PMID:12142407
Positional cloning of the gene LIMBIN responsible for bovine chondrodysplastic dwarfism.
PMID:12136126
A GAF-domain-regulated adenylyl cyclase from Anabaena is a self-activating cAMP switch.
PMID:12110580
Phylogenetic analysis of the human basic helix-loop-helix proteins.
PMID:12093377
ORMDL proteins are a conserved new family of endoplasmic reticulum membrane proteins.
PMID:12093374
Microarray analysis of the Mycobacterium tuberculosis transcriptional response to the acidic conditions found in phagosomes.
PMID:12081975
Mutant analysis and cellular localization of the AlgI, AlgJ, and AlgF proteins required for O acetylation of alginate in Pseudomonas aeruginosa.
PMID:12003941
Recurrent mutation of the gene encoding sequestosome 1 (SQSTM1/p62) in Paget disease of bone.
PMID:11992264
The identification of functional modules from the genomic association of genes.
PMID:11983890
Vav regulates activation of Rac but not Cdc42 during FcgammaR-mediated phagocytosis.
PMID:11950933
Cloning and characterization of a cAMP-specific phosphodiesterase (TbPDE2B) from Trypanosoma brucei.
PMID:11930017
The complete genome of hyperthermophile Methanopyrus kandleri AV19 and monophyly of archaeal methanogens.
PMID:11930014
The extracellular transport signal of the Vibrio cholerae endochitinase (ChiA) is a structural motif located between amino acids 75 and 555.
PMID:11914354
PKHD1, the polycystic kidney and hepatic disease 1 gene, encodes a novel large protein containing multiple immunoglobulin-like plexin-transcription-factor domains and parallel beta-helix 1 repeats.
PMID:11898128
A crystallographic view of interactions between Dbs and Cdc42: PH domain-assisted guanine nucleotide exchange.
PMID:11889037
Characterization of a chitinase gene from Stenotrophomonas maltophilia strain 34S1 and its involvement in biological control.
PMID:11872449
Selection in the evolution of gene duplications.
PMID:11864370
Identification and characterization of subfamily-specific signatures in a large protein superfamily by a hidden Markov model approach.
PMID:11818024
Systematic identification of novel protein domain families associated with nuclear functions.
PMID:11779830
Signal- and importin-dependent nuclear targeting of the kidney anion exchanger 1-binding protein kanadaptin.
PMID:11772400
Siah-1 binds and regulates the function of Numb.
PMID:11752454
Combining multiple structure and sequence alignments to improve sequence detection and alignment: application to the SH2 domains of Janus kinases.
PMID:11752426
Recent improvements to the SMART domain-based sequence annotation resource.
PMID:11752305
Characterization of E3/49K, a novel, highly glycosylated E3 protein of the epidemic keratoconjunctivitis-causing adenovirus type 19a.
PMID:11752165
Identification of two Mycobacterium tuberculosis H37Rv ORFs involved in resistance to killing by human macrophages.
PMID:11716786
The Arabidopsis pxa1 mutant is defective in an ATP-binding cassette transporter-like protein required for peroxisomal fatty acid beta-oxidation.
PMID:11706205
Role of SH3 domain-containing proteins in clathrin-mediated vesicle trafficking in Arabidopsis.
PMID:11701884
Identification of components of the murine histone deacetylase 6 complex: link between acetylation and ubiquitination signaling pathways.
PMID:11689694
A novel regulatory gene, Tri10, controls trichothecene toxin production and gene expression.
PMID:11679358
Abundant protein domains occur in proportion to proteome size.
PMID:11574058
Definition of EGF-like, closely interacting modules that bear activation epitopes in integrin beta subunits.
PMID:11572973
Origin of fibronectin type II (FN2) modules: structural analyses of distantly-related members of the kringle family idey the kringle domain of neurotrypsin as a potential link between FN2 domains and kringles.
PMID:11567102
FYVE zinc-finger proteins in the plant model Arabidopsis thaliana: identification of PtdIns3P-binding residues by comparison of classic and variant FYVE domains.
PMID:11563980
A post-docking role for active zone protein Rim.
PMID:11559854
Ferric dicitrate transport system (Fec) of Shigella flexneri 2a YSH6000 is encoded on a novel pathogenicity island carrying multiple antibiotic resistance genes.
PMID:11553538
Sodium ion cycle in bacterial pathogens: evidence from cross-genome comparisons.
PMID:11528000
Analysis of the myosins encoded in the recently completed Arabidopsis thaliana genome sequence.
PMID:11516337
Prokaryotic homologs of the eukaryotic DNA-end-binding protein Ku, novel domains in the Ku protein and prediction of a prokaryotic double-strand break repair system.
PMID:11483577
Genome sequence and comparative analysis of the solvent-producing bacterium Clostridium acetobutylicum.
PMID:11466286
PAS kinase: an evolutionarily conserved PAS domain-regulated serine/threonine kinase.
PMID:11459942
Identification of a cytoskeleton-associated 120 kDa RNA-binding protein in developing rice seeds.
PMID:11437252
Increasing protein stability using a rational approach combining sequence homology and structural alignment: Stabilizing the WW domain.
PMID:11420447
WD-repeat protein encoding genes among prokaryotes of the Streptomyces genus.
PMID:11347268
Epigenetic inactivation of RASSF1A in lung and breast cancers and malignant phenotype suppression.
PMID:11333291
09/15: Comparative genomics of a conserved chromosomal region associated with a complex human phenotype.
PMID:11318607
Stu2 promotes mitotic spindle elongation in anaphase.
PMID:11309422
PartsList: a web-based system for dynamically ranking protein folds based on disparate attributes, including whole-genome expression and interaction information.
PMID:11292848
The Dictyostelium Bcr/Abr-related protein DRG regulates both Rac- and Rab-dependent pathways.
PMID:11285226
A human protein containing multiple types of protease-inhibitory modules.
PMID:11274388
C2 domains from different Ca2+ signaling pathways display functional and mechanistic diversity.
PMID:11258923
Genome of the extremely radiation-resistant bacterium Deinococcus radiodurans viewed from the perspective of comparative genomics.
PMID:11238985
Regulation of CDC42 GTPase by proline-rich tyrosine kinase 2 interacting with PSGAP, a novel pleckstrin homology and Src homology 3 domain containing rhoGAP protein.
PMID:11238453
Involvement of ResE phosphatase activity in down-regulation of ResD-controlled genes in Bacillus subtilis during aerobic growth.
PMID:11222591
The CELF family of RNA binding proteins is implicated in cell-specific and developmentally regulated alternative splicing.
PMID:11158314
Chondrocyte expressed protein-68 (CEP-68), a novel human marker gene for cultured chondrocytes.
PMID:11139377
The InterPro database, an integrated documentation resource for protein families, domains and functional sites.
PMID:11125043
A novel two-component hybrid molecule regulates vascular morphogenesis of the Arabidopsis root.
PMID:11114883
Are plant formins integral membrane proteins?
PMID:11104517
Mutations affecting the development of the peripheral nervous system in Drosophila: a molecular screen for novel proteins.
PMID:11102367
Mutagenesis of the phosphatidylinositol 4,5-bisphosphate (PIP(2)) binding site in the NH(2)-terminal domain of ezrin correlates with its altered cellular distribution.
PMID:11086008
Polydom: a secreted protein with pentraxin, complement control protein, epidermal growth factor and von Willebrand factor A domains.
PMID:11062057
Structure of the GAF domain, a ubiquitous signaling motif and a new class of cyclic GMP receptor.
PMID:11032796
Proteins of the endoplasmic-reticulum-associated degradation pathway: domain detection and function prediction.
PMID:11023840
Herpesvirus homologues of cellular genes.
PMID:11022790
Lineage-specific loss and divergence of functionally linked genes in eukaryotes.
PMID:11016957
Structural basis of the membrane-targeting and unmasking mechanisms of the radixin FERM domain.
PMID:10970839
HCF-1 amino- and carboxy-terminal subunit association through two separate sets of interaction modules: involvement of fibronectin type 3 repeats.
PMID:10958670
Human sphingosine kinase: purification, molecular cloning and characterization of the native and recombinant enzymes.
PMID:10947957
Characterization of palladin, a novel protein localized to stress fibers and cell adhesions.
PMID:10931874
The Drosophila cystoblast differentiation factor, benign gonial cell neoplasm, is related to DExH-box proteins and interacts genetically with bag-of-marbles.
PMID:10924476
Common fold in helix-hairpin-helix proteins.
PMID:10908318
Caenorhabditis elegans lin-13, a member of the LIN-35 Rb class of genes involved in vulval development, encodes a protein with zinc fingers and an LXCXE motif.
PMID:10880475
Synechocystis strain PCC 6803 cya2, a prokaryotic gene that encodes a guanylyl cyclase.
PMID:10851002
Interaction between PAK and nck: a template for Nck targets and role of PAK autophosphorylation.
PMID:10805734
A putative endosomal t-SNARE links exo- and endocytosis in the phytopathogenic fungus Ustilago maydis.
PMID:10790364
Conserved plant genes with similarity to mammalian de novo DNA methyltransferases.
PMID:10781108
Regulation of the Jak2 tyrosine kinase by its pseudokinase domain.
PMID:10779328
Interaction of murine BiP/GRP78 with the DnaJ homologue MTJ1.
PMID:10777498
Enhancement of Na(+) uptake currents, time-dependent inward-rectifying K(+) channel currents, and K(+) channel transcripts by K(+) starvation in wheat root cells.
PMID:10759535
Human herpesvirus 8 open reading frame 21 is a thymidine and thymidylate kinase of narrow substrate specificity that efficiently phosphorylates zidovudine but not ganciclovir.
PMID:10623730
SMART: a web-based tool for the study of genetically mobile domains.
PMID:10592234
The yeast GRD20 gene is required for protein sorting in the trans-Golgi network/endosomal system and for polarization of the actin cytoskeleton.
PMID:10588657
Overexpression of the Candida albicans ALA1 gene in Saccharomyces cerevisiae results in aggregation following attachment of yeast cells to extracellular matrix proteins, adherence properties similar to those of Candida albicans.
PMID:10531265
A putative exchange factor for Rho1 GTPase is required for initiation of cytokinesis in Drosophila.
PMID:10485851
ZASP: a new Z-band alternatively spliced PDZ-motif protein.
PMID:10427098
Identification of a new gene family expressed during the onset of sexual reproduction in the centric diatom Thalassiosira weissflogii.
PMID:10388712
Interaction of axin and Dvl-2 proteins regulates Dvl-2-stimulated TCF-dependent transcription.
PMID:10329628
Ponsin/SH3P12: an l-afadin- and vinculin-binding protein localized at cell-cell and cell-matrix adherens junctions.
PMID:10085297
Autosomal SCID caused by a point mutation in the N-terminus of Jak3: mapping of the Jak3-receptor interaction domain.
PMID:10075926
Janus kinases and focal adhesion kinases play in the 4.1 band: a superfamily of band 4.1 domains important for cell structure and signal transduction.
PMID:9990861
Measuring genome evolution.
PMID:9600883