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RSpred

Names
More detailed information about this field from each metasource.

RSpred
metasource: bio.tools
version: extracted_at: 2022-11-04T11:30:37.137472

rspred
metasource: bio.tools
version: extracted_at: 2022-11-04T11:30:37.137472

Other names: rspred

Names

More detailed information about this field from each metasource.

RSpred

metasource: bio.tools
version: extracted_at: 2022-11-04T11:30:37.137472

rspred

metasource: bio.tools
version: extracted_at: 2022-11-04T11:30:37.137472

A Rifin/Stevor prediction tool.

Description

More detailed information about this field from each metasource.

A Rifin/Stevor prediction tool.

metasource: bio.tools
version: extracted_at: 2022-11-04T11:30:37.137472

Webpage:

http://persson-group.scilifelab.se/rspred/

Webpage

More detailed information about this field from each metasource.

http://persson-group.scilifelab.se/rspred/

metasource: bio.tools
version: extracted_at: 2022-11-04T11:30:37.137472

Licence:

Name: Unlicense

Licence name

More detailed information about this field from each metasource.

Unlicense

metasource: bio.tools
version: extracted_at: 2022-11-04T11:30:37.137472

Publications:

Publications
More detailed information about this field from each metasource.

http://dx.doi.org/10.1186/1471-2164-12-119
metasource: bio.tools
version: extracted_at: 2022-11-04T11:30:37.137472

http://dx.doi.org/10.1186/1471-2164-12-119

Tags:

Tags
More detailed information about this field from each metasource.

sequence analysis
metasource: bio.tools
version: extracted_at: 2022-11-04T11:30:37.137472

sequence analysis

More to explore:

1/20

p53

P53 mutation browser.

Alias

A tool for converting identifiers in which multiple aliases are used to refer to sequences. Also available as a stand-alone tool.

WeGET

Weighted gene co-expression tool

DDAP

Docking domain affinity and biosynthetic pathway prediction tool for type I polyketide synthases.

mESAdb

microRNA Expression and Sequence Analysis Database

RSSsite

Reference database and prediction tool for the identification of cryptic recombination signal sequences (RSSs) in the human and mouse genomes.

DeepHF

Optimized CRISPR guide RNA design for two high-fidelity Cas9 variants by deep learning | Core code for the DeepHF prediction tool | SpCas9 & Base Editor Efficiency Prediction | This tool provides guid ...

SDRDB

Short-chain dehydrogenases/reductases database.

Group II introns database

Database for identification and cataloguing of group II introns. All bacterial introns listed are full-length and appear to be functional, based on intron RNA and IEP characteristics. The database nam ...

DTU Bioinformatics

CBS offers Comprehensive public databases of DNA- and protein sequences, macromolecular structure, g ene and protein expression levels, pathway organization and cell signalling, have been established ...

siRNAdb

The siRNA database provides a gene-centric view of human siRNA experimental data, including siRNAs of known efficacy and siRNAs predicted to be of high efficacy by siSearch. Linked to these sequences ...

miRDB

miRNA target prediction and functional annotation

PROFEAT

Tool for computing commonly-used structural and physicochemical features of proteins and peptides from amino acid sequence. New functions include computation of protein-protein and protein-small molec ...

GenomeNet

Network of database and computational resources including KEGG (pathways, interactions, etc.) and DBGET/LinkDB (an integrated database retrieval system). It also hosts several web-based tools for sequ ...

Pf-Phospho

A machine learning-based phosphorylation sites prediction tool for Plasmodium proteins.

Variant Effect Predictor data format

A text format devised by Ensembl for the eponymous Variant Effect Predictor tool.

Automatic molecular interaction predictions

InteroPorc is an automatic prediction tool to infer protein-protein interaction networks. It is applicable for lots of species using orthology and known interactions. The interoPORC method is based on ...

CavitySpace

A database of potential ligand binding sites in the human proteome.

Genome Trax

A search tool for finding variants from specific chromosome coordinates. It is possible to integrate the results in NGS pipeline.

Minimal Metagenome Sequence Analysis Standard

A proposed set of minimal standard analyses necessary for proper interpretation of meta-omic data and to allow comparative metagenomics and metatranscriptomics. Please note: We cannot find an up-to-da ...

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Data is amalgamated and only retrieved periodically.
Some of the resources used by the system:

® FAIRsharing.org
® Bioontology/Bioportal Terms
® Nucleic Acid Research - Database
® re3data.org
® bio.tools
® PubMed - Courtesy of the U.S. National Library of Medicine

RSpred Names More detailed information about this field from each metasource. × RSpred metasource: bio.tools version: extracted_at: 2022-11-04T11:30:37.137472 rspred metasource: bio.tools version: extracted_at: 2022-11-04T11:30:37.137472 Close

Webpage:

Licence:

Publications: Publications More detailed information about this field from each metasource. × http://dx.doi.org/10.1186/1471-2164-12-119 metasource: bio.tools version: extracted_at: 2022-11-04T11:30:37.137472 Close

Tags: Tags More detailed information about this field from each metasource. × sequence analysis metasource: bio.tools version: extracted_at: 2022-11-04T11:30:37.137472 Close

More to explore:

1/20

p53

Alias

WeGET

DDAP

mESAdb

RSSsite

DeepHF

SDRDB

Group II introns database

DTU Bioinformatics

siRNAdb

miRDB

PROFEAT

GenomeNet

Pf-Phospho

Variant Effect Predictor data format

Automatic molecular interaction predictions

CavitySpace

Genome Trax

Minimal Metagenome Sequence Analysis Standard

RSpred

Names
More detailed information about this field from each metasource.

RSpred
metasource: bio.tools
version: extracted_at: 2022-11-04T11:30:37.137472

rspred
metasource: bio.tools
version: extracted_at: 2022-11-04T11:30:37.137472

Publications:

Publications
More detailed information about this field from each metasource.

http://dx.doi.org/10.1186/1471-2164-12-119
metasource: bio.tools
version: extracted_at: 2022-11-04T11:30:37.137472

Tags:

Tags
More detailed information about this field from each metasource.

sequence analysis
metasource: bio.tools
version: extracted_at: 2022-11-04T11:30:37.137472