Plant Repeat Database (Plantre) provides re-annotated repeat sequences of plant using a uniform pipeline. The current version of plantrep contains 206.04Gb of 396,041,410 repeats from 459 species that were divided into 15 clades based on their phylogeny: algae, bryophyte, lycophytes, fern, gymnosperms, ANA (early angiosperms), magnolids, monocots, base eudicots, super rosids, fabids, malvid, super asterids, lamiids, and campanulids.
plant biology sequence composition, complexity and repeats evolutionary biology agricultural science sequencing