Paired Omics Data Platform
Names
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Paired Omics Data Platform
metasource: Fairsharing.org
version: None
PoDP
metasource: Fairsharing.org
version: None
Names
More detailed information about this field from each metasource.
Paired Omics Data Platform
metasource: Fairsharing.orgversion: None
PoDP
metasource: Fairsharing.orgversion: None
Names
More detailed information about this field from each metasource.
Paired Omics Data Platform
metasource: Fairsharing.orgversion: None
PoDP
metasource: Fairsharing.orgversion: None
Paired Omics Data Platform (PoDP) was created to streamline access to paired omics data so humans and computers can access and read paired datasets as well as record and exploit validated links between BGCs and metabolites. The aim of the PoDP is to connect public metabolomics datasets to their genomic origins. The PoDP does not store any metabolomics or genomics datasets, but captures metadata defining pairs of omics datasets in existing public databases and platforms already validated and utilized by the genomics and metabolomics communities.
Description
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Paired Omics Data Platform (PoDP) was created to streamline access to paired omics data so humans and computers can access and read paired datasets as well as record and exploit validated links between BGCs and metabolites. The aim of the PoDP is to connect public metabolomics datasets to their genomic origins. The PoDP does not store any metabolomics or genomics datasets, but captures metadata defining pairs of omics datasets in existing public databases and platforms already validated and utilized by the genomics and metabolomics communities.
metasource: Fairsharing.orgversion: None
Webpage:
https://pairedomicsdata.bioinformatics.nl/Webpage
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Licence:
Name: Creative Commons Attribution 4.0 International (CC BY 4.0)Licence name
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Creative Commons Attribution 4.0 International (CC BY 4.0)
metasource: Fairsharing.orgversion: None
Licence URL
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Publications:
Publications
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A community resource for paired genomic and metabolomic data mining
PMID: 33589842
metasource: Fairsharing.org
version: None
Publications
More detailed information about this field from each metasource.
A community resource for paired genomic and metabolomic data mining
PMID: 33589842
metasource: Fairsharing.org
version: None
-
A community resource for paired genomic and metabolomic data mining
PubMed citations: 25.
25 articles citing: A community resource for paired genomic and metabolomic data mining
There and back again; historical perspective and future directions for Vaccinium breeding and research studies. PMID:35611183
Microbial metabolites in the marine carbon cycle. PMID:35365785
Past accomplishments and future challenges of the multi-omics characterization of leaf growth. PMID:35325227
Strategies to access biosynthetic novelty in bacterial genomes for drug discovery. PMID:35296832
NP Analyst: An Open Online Platform for Compound Activity Mapping. PMID:35233454
The Studies in Constructing Yeast Cell Factories for the Production of Fatty Acid Alkyl Esters. PMID:35087801
MIMOSA2: A metabolic network-based tool for inferring mechanism-supported relationships in microbiome-metabolome data. PMID:34999748
Advances in Biosynthesis of Natural Products from Marine Microorganisms. PMID:34946152
Advances in decomposing complex metabolite mixtures using substructure- and network-based computational metabolomics approaches. PMID:34821250
Vertical Inheritance Facilitates Interspecies Diversification in Biosynthetic Gene Clusters and Specialized Metabolites. PMID:34809466
Metabolomics and genomics in natural products research: complementary tools for targeting new chemical entities. PMID:34787623
Unravelling the Anticancer Mechanisms of Traditional Herbal Medicines with Metabolomics. PMID:34770949
Advancements in capturing and mining mass spectrometry data are transforming natural products research. PMID:34612288
Host and microbiota metabolic signals in aging and longevity. PMID:34552221
Computational Applications in Secondary Metabolite Discovery (CAiSMD): an online workshop. PMID:34488889
Comprehensive Large-Scale Integrative Analysis of Omics Data To Accelerate Specialized Metabolite Discovery. PMID:34427506
Current Approaches for Advancement in Understanding the Molecular Mechanisms of Mycotoxin Biosynthesis. PMID:34360643
Genome mining for drug discovery: progress at the front end. PMID:34279640
The Chemistry of Stress: Understanding the 'Cry for Help' of Plant Roots. PMID:34199628
MolDiscovery: learning mass spectrometry fragmentation of small molecules. PMID:34140479
Mining genomes to illuminate the specialized chemistry of life. PMID:34083778
Ranking microbial metabolomic and genomic links in the NPLinker framework using complementary scoring functions. PMID:33945539
Coupling Mass Spectral and Genomic Information to Improve Bacterial Natural Product Discovery Workflows. PMID:33807702
Blocks in the pseudouridimycin pathway unlock hidden metabolites in the Streptomyces producer strain. PMID:33712632
The Landscape of Recombination Events That Create Nonribosomal Peptide Diversity. PMID:33480992
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