MouseMine @ MGI
Names
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MouseMine @ MGI
metasource: Fairsharing.org
version: FAIRsharing.org: MouseMine; MouseMine @ MGI; DOI: https://doi.org/10.25504/FAIRsharing.22z3re; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
MouseMine
metasource: Fairsharing.org
version: FAIRsharing.org: MouseMine; MouseMine @ MGI; DOI: https://doi.org/10.25504/FAIRsharing.22z3re; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
Names
More detailed information about this field from each metasource.
MouseMine @ MGI
metasource: Fairsharing.orgversion: FAIRsharing.org: MouseMine; MouseMine @ MGI; DOI: https://doi.org/10.25504/FAIRsharing.22z3re; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
MouseMine
metasource: Fairsharing.orgversion: FAIRsharing.org: MouseMine; MouseMine @ MGI; DOI: https://doi.org/10.25504/FAIRsharing.22z3re; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
Names
More detailed information about this field from each metasource.
MouseMine @ MGI
metasource: Fairsharing.orgversion: FAIRsharing.org: MouseMine; MouseMine @ MGI; DOI: https://doi.org/10.25504/FAIRsharing.22z3re; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
MouseMine
metasource: Fairsharing.orgversion: FAIRsharing.org: MouseMine; MouseMine @ MGI; DOI: https://doi.org/10.25504/FAIRsharing.22z3re; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
A database of integrated mouse data from MGI, powered by InterMine. MouseMine is member of InterMOD, a consortium of model organism databases dedicated to making cross-species data analysis easier through ongoing coordination and collaborative system development.
Description
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A database of integrated mouse data from MGI, powered by InterMine. MouseMine is member of InterMOD, a consortium of model organism databases dedicated to making cross-species data analysis easier through ongoing coordination and collaborative system development.
metasource: Fairsharing.orgversion: FAIRsharing.org: MouseMine; MouseMine @ MGI; DOI: https://doi.org/10.25504/FAIRsharing.22z3re; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
Webpage:
http://www.mousemine.orgWebpage
More detailed information about this field from each metasource.
http://www.mousemine.org
metasource: Fairsharing.orgversion: FAIRsharing.org: MouseMine; MouseMine @ MGI; DOI: https://doi.org/10.25504/FAIRsharing.22z3re; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
Licence:
Name: GNU Lesser General Public License (LGPL) 2.1Licence name
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GNU Lesser General Public License (LGPL) 2.1
metasource: Fairsharing.orgversion: FAIRsharing.org: MouseMine; MouseMine @ MGI; DOI: https://doi.org/10.25504/FAIRsharing.22z3re; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
Licence URL
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https://www.gnu.org/licenses/lgpl-2.1.html
metasource: Fairsharing.orgversion: FAIRsharing.org: MouseMine; MouseMine @ MGI; DOI: https://doi.org/10.25504/FAIRsharing.22z3re; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
Publications:
Publications
More detailed information about this field from each metasource.
MouseMine: a new data warehouse for MGI
PMID: 26092688
metasource: Fairsharing.org
version: FAIRsharing.org: MouseMine; MouseMine @ MGI; DOI: https://doi.org/10.25504/FAIRsharing.22z3re; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
Publications
More detailed information about this field from each metasource.
MouseMine: a new data warehouse for MGI
PMID: 26092688
metasource: Fairsharing.org
version: FAIRsharing.org: MouseMine; MouseMine @ MGI; DOI: https://doi.org/10.25504/FAIRsharing.22z3re; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
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MouseMine: a new data warehouse for MGI
PubMed citations: 63.
63 articles citing: MouseMine: a new data warehouse for MGI
HumanMine: advanced data searching, analysis and cross-species comparison. PMID:35820040
Dietary Conjugated Linoleic Acid Reduces Body Weight and Fat in Snord116m+/p- and Snord116m-/p- Mouse Models of Prader-Willi Syndrome. PMID:35215509
Genomic patterns of transcription-replication interactions in mouse primary B cells. PMID:35100392
Genetic control of the pluripotency epigenome determines differentiation bias in mouse embryonic stem cells. PMID:34931323
Loss of PRC2 subunits primes lineage choice during exit of pluripotency. PMID:34848733
COMMD10 is critical for Kupffer cell survival and controls Ly6Chi monocyte differentiation and inflammation in the injured liver. PMID:34788631
Progress towards completing the mutant mouse null resource. PMID:34698892
Mouse Genome Informatics (MGI): latest news from MGD and GXD. PMID:34698891
Contraceptive and Infertility Target DataBase: a contraceptive drug development tool for targeting and analysis of human reproductive specific tissues†. PMID:34514504
General Caspase Inhibition in Primary Chondrogenic Cultures Impacts Their Transcription Profile Including Osteoarthritis-Related Factors. PMID:34496641
Annotated expression and activity data for murine recombinase alleles and transgenes: the CrePortal resource. PMID:34482425
Dynamic changes in RNA-protein interactions and RNA secondary structure in mammalian erythropoiesis. PMID:34315813
Overcoming false-positive gene-category enrichment in the analysis of spatially resolved transcriptomic brain atlas data. PMID:33976144
The chromatin remodelling protein LSH/HELLS regulates the amount and distribution of DNA hydroxymethylation in the genome. PMID:33960278
Comparison of sparse biclustering algorithms for gene expression datasets. PMID:33951731
Functional and structural basis of extreme conservation in vertebrate 5' untranslated regions. PMID:33821006
Combined genomic and proteomic approaches reveal DNA binding sites and interaction partners of TBX2 in the developing lung. PMID:33731112
Exposure to maternal high-fat diet induces extensive changes in the brain of adult offspring. PMID:33654064
Sequence variation, common tissue expression patterns and learning models: a genome-wide survey of vertebrate ribosomal proteins. PMID:33575632
Mouse Genome Database (MGD): Knowledgebase for mouse-human comparative biology. PMID:33231642
UTX/KDM6A suppresses AP-1 and a gliogenesis program during neural differentiation of human pluripotent stem cells. PMID:32977832
Extreme Acetylation of the Cardiac Mitochondrial Proteome Does Not Promote Heart Failure. PMID:32660330
An Overview of In Vivo and In Vitro Models for Autosomal Dominant Polycystic Kidney Disease: A Journey from 3D-Cysts to Mini-Pigs. PMID:32630605
Giant Island Mice Exhibit Widespread Gene Expression Changes in Key Metabolic Organs. PMID:32531054
The mutational constraint spectrum quantified from variation in 141,456 humans. PMID:32461654
Evaluating drug targets through human loss-of-function genetic variation. PMID:32461653
A Genome-Wide Screen in Mice To Identify Cell-Extrinsic Regulators of Pulmonary Metastatic Colonisation. PMID:32245826
Neuroinflammation-Associated Aspecific Manipulation of Mouse Predator Fear by Toxoplasma gondii. PMID:31940479
Transgenerational Self-Reconstruction of Disrupted Chromatin Organization After Exposure To An Environmental Stressor in Mice. PMID:31506492
A first genetic portrait of synaptonemal complex variation. PMID:31449519
Common and distinct transcriptional signatures of mammalian embryonic lethality. PMID:31243271
Genomic landscape analyses of reprogrammed cells using integrative and non-integrative methods reveal variable cancer-associated alterations. PMID:31105870
Mammalian SWI/SNF collaborates with a polycomb-associated protein to regulate male germline transcription in the mouse. PMID:31043422
FAIRness and Usability for Open-access Omics Data Systems. PMID:30815061
Identifying mouse developmental essential genes using machine learning. PMID:30563825
Genome-wide study of hair colour in UK Biobank explains most of the SNP heritability. PMID:30531825
Mouse Genome Database (MGD) 2019. PMID:30407599
Gene expression profiling in a mouse model of Dravet syndrome. PMID:30347190
AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture. PMID:30239679
In utero gene expression in the Slc39a8(neo/neo) knockdown mouse. PMID:30013175
Using WormBase: A Genome Biology Resource for Caenorhabditis elegans and Related Nematodes. PMID:29761466
Survey of Human Chromosome 21 Gene Expression Effects on Early Development in Danio rerio. PMID:29760202
Sensing the cilium, digital capture of ciliary data for comparative genomics investigations. PMID:29713460
Disease Ontology: improving and unifying disease annotations across species. PMID:29590633
Ultraconserved Enhancers Are Required for Normal Development. PMID:29358049
Affinity purification mass spectrometry analysis of PD-1 uncovers SAP as a new checkpoint inhibitor. PMID:29282323
Ancestral perinatal obesogen exposure results in a transgenerational thrifty phenotype in mice. PMID:29222412
Mouse Genome Database (MGD)-2018: knowledgebase for the laboratory mouse. PMID:29092072
Mouse Genome Informatics (MGI) Resource: Genetic, Genomic, and Biological Knowledgebase for the Laboratory Mouse. PMID:28838066
Exploring Wound-Healing Genomic Machinery with a Network-Based Approach. PMID:28635674
CHOmine: an integrated data warehouse for CHO systems biology and modeling. PMID:28605771
Epistatic Networks Jointly Influence Phenotypes Related to Metabolic Disease and Gene Expression in Diversity Outbred Mice. PMID:28592500
Genetics of Genome-Wide Recombination Rate Evolution in Mice from an Isolated Island. PMID:28576862
Effective biomedical document classification for identifying publications relevant to the mouse Gene Expression Database (GXD). PMID:28365740
Effects of different kinds of essentiality on sequence evolution of human testis proteins. PMID:28272493
Haploinsufficiency networks identify targetable patterns of allelic deficiency in low mutation ovarian cancer. PMID:28198375
Analysis of gene expression in the nervous system identifies key genes and novel candidates for health and disease. PMID:28190221
Searching the Mouse Genome Informatics (MGI) Resources for Information on Mouse Biology from Genotype to Phenotype. PMID:27930808
The mouse Gene Expression Database (GXD): 2017 update. PMID:27899677
Mouse Genome Database (MGD)-2017: community knowledge resource for the laboratory mouse. PMID:27899570
Mouse genome database 2016. PMID:26578600
Hymenoptera Genome Database: integrating genome annotations in HymenopteraMine. PMID:26578564
Mouse Genome Informatics (MGI): reflecting on 25 years. PMID:26238262
Tags:
Tags
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disease
metasource: Fairsharing.org
version: FAIRsharing.org: MouseMine; MouseMine @ MGI; DOI: https://doi.org/10.25504/FAIRsharing.22z3re; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
disease process modeling
metasource: Fairsharing.org
version: FAIRsharing.org: MouseMine; MouseMine @ MGI; DOI: https://doi.org/10.25504/FAIRsharing.22z3re; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
gene expression data
metasource: Fairsharing.org
version: FAIRsharing.org: MouseMine; MouseMine @ MGI; DOI: https://doi.org/10.25504/FAIRsharing.22z3re; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
genome
metasource: Fairsharing.org
version: FAIRsharing.org: MouseMine; MouseMine @ MGI; DOI: https://doi.org/10.25504/FAIRsharing.22z3re; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
model organism
metasource: Fairsharing.org
version: FAIRsharing.org: MouseMine; MouseMine @ MGI; DOI: https://doi.org/10.25504/FAIRsharing.22z3re; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
phenotype
metasource: Fairsharing.org
version: FAIRsharing.org: MouseMine; MouseMine @ MGI; DOI: https://doi.org/10.25504/FAIRsharing.22z3re; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
Tags
More detailed information about this field from each metasource.
disease
metasource: Fairsharing.orgversion: FAIRsharing.org: MouseMine; MouseMine @ MGI; DOI: https://doi.org/10.25504/FAIRsharing.22z3re; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
disease process modeling
metasource: Fairsharing.orgversion: FAIRsharing.org: MouseMine; MouseMine @ MGI; DOI: https://doi.org/10.25504/FAIRsharing.22z3re; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
gene expression data
metasource: Fairsharing.orgversion: FAIRsharing.org: MouseMine; MouseMine @ MGI; DOI: https://doi.org/10.25504/FAIRsharing.22z3re; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
genome
metasource: Fairsharing.orgversion: FAIRsharing.org: MouseMine; MouseMine @ MGI; DOI: https://doi.org/10.25504/FAIRsharing.22z3re; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
model organism
metasource: Fairsharing.orgversion: FAIRsharing.org: MouseMine; MouseMine @ MGI; DOI: https://doi.org/10.25504/FAIRsharing.22z3re; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
phenotype
metasource: Fairsharing.orgversion: FAIRsharing.org: MouseMine; MouseMine @ MGI; DOI: https://doi.org/10.25504/FAIRsharing.22z3re; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
disease disease process modeling gene expression genome model organism phenotype
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