Analysis of the landscape of human enhancer sequences in biological databases. 
 PMID:35685360
                                    
                                
                                    Identifying and classifying goals for scientific knowledge. 
 PMID:34661112
                                    
                                
                                    ECO-CollecTF: A Corpus of Annotated Evidence-Based Assertions in Biomedical Manuscripts. 
 PMID:34327299
                                    
                                
                                    Quality Matters: Biocuration Experts on the Impact of Duplication and Other Data Quality Issues in Biological Databases. 
 PMID:32652120
                                    
                                
                                    A harmonized meta-knowledgebase of clinical interpretations of somatic genomic variants in cancer. 
 PMID:32246132
                                    
                                
                                    Wikidata as a knowledge graph for the life sciences. 
 PMID:32180547
                                    
                                
                                    HAMAP as SPARQL rules-A portable annotation pipeline for genomes and proteomes. 
 PMID:32034905
                                    
                                
                                    The Empusa code generator and its application to GBOL, an extendable ontology for genome annotation. 
 PMID:31685817
                                    
                                
                                    Bovine Genome Database: new annotation tools for a new reference genome. 
 PMID:31647100
                                    
                                
                                    Challenges in the annotation of pseudoenzymes in databases: the UniProtKB approach. 
 PMID:31618524
                                    
                                
                                    A Logical Model of Homology for Comparative Biology. 
 PMID:31596473
                                    
                                
                                    The Plant Ontology Facilitates Comparisons of Plant Development Stages Across Species. 
 PMID:31214208
                                    
                                
                                    Annotation of gene product function from high-throughput studies using the Gene Ontology. 
 PMID:30715275
                                    
                                
                                    Towards comprehensive annotation of Drosophila melanogaster enzymes in FlyBase. 
 PMID:30689844
                                    
                                
                                    Systematics for types and effects of DNA variations. 
 PMID:30591019
                                    
                                
                                    Open Targets Platform: new developments and updates two years on. 
 PMID:30462303
                                    
                                
                                    ECO, the Evidence & Conclusion Ontology: community standard for evidence information. 
 PMID:30407590
                                    
                                
                                    The Gene Ontology Resource: 20 years and still GOing strong. 
 PMID:30395331
                                    
                                
                                    A community-driven reconstruction of the Aspergillus niger metabolic network. 
 PMID:30275963
                                    
                                
                                    HDncRNA: a comprehensive database of non-coding RNAs associated with heart diseases. 
 PMID:30053237
                                    
                                
                                    GOATOOLS: A Python library for Gene Ontology analyses. 
 PMID:30022098
                                    
                                
                                    A new bioinformatics tool to help assess the significance of BRCA1 variants. 
 PMID:29996917
                                    
                                
                                    Using ZFIN: Data Types, Organization, and Retrieval. 
 PMID:29761463
                                    
                                
                                    ProteomeVis: a web app for exploration of protein properties from structure to sequence evolution across organisms' proteomes. 
 PMID:29741573
                                    
                                
                                    Updated regulation curation model at the Saccharomyces Genome Database. 
 PMID:29688362
                                    
                                
                                    Identification of errors in the IEDB using ontologies. 
 PMID:29688357
                                    
                                
                                    The Planteome database: an integrated resource for reference ontologies, plant genomics and phenomics. 
 PMID:29186578
                                    
                                
                                    Zebrafish Models of Human Disease: Gaining Insight into Human Disease at ZFIN. 
 PMID:28838067
                                    
                                
                                    Use of Biomedical Ontologies for Integration of Biological Knowledge for Learning and Prediction of Adverse Drug Reactions. 
 PMID:28469412
                                    
                                
                                    The anatomy of phenotype ontologies: principles, properties and applications. 
 PMID:28387809
                                    
                                
                                    Computer-Aided Experiment Planning toward Causal Discovery in Neuroscience. 
 PMID:28243197
                                    
                                
                                    Annotation of functional impact of voltage-gated sodium channel mutations. 
 PMID:28168870
                                    
                                
                                    From the research laboratory to the database: the Caenorhabditis elegans kinome in UniProtKB. 
 PMID:28159896
                                    
                                
                                    Open Targets: a platform for therapeutic target identification and validation. 
 PMID:27899665
                                    
                                
                                    The Monarch Initiative: an integrative data and analytic platform connecting phenotypes to genotypes across species. 
 PMID:27899636
                                    
                                
                                    UniProt: the universal protein knowledgebase. 
 PMID:27899622
                                    
                                
                                    The neXtProt knowledgebase on human proteins: 2017 update. 
 PMID:27899619
                                    
                                
                                    The Zebrafish Model Organism Database: new support for human disease models, mutation details, gene expression phenotypes and searching. 
 PMID:27899582
                                    
                                
                                    The Evidence and Conclusion Ontology (ECO): Supporting GO Annotations. 
 PMID:27812948
                                    
                                
                                    Primer on the Gene Ontology. 
 PMID:27812933
                                    
                                
                                    Automated detection of discourse segment and experimental types from the text of cancer pathway results sections. 
 PMID:27580922
                                    
                                
                                    Prediction of Metabolic Pathway Involvement in Prokaryotic UniProtKB Data by Association Rule Mining. 
 PMID:27390860
                                    
                                
                                    Standardization for natural product synthetic biology. 
 PMID:27313083
                                    
                                
                                    An ontology for factors affecting tuberculosis treatment adherence behavior in sub-Saharan Africa. 
 PMID:27175067
                                    
                                
                                    The Ontology for Biomedical Investigations. 
 PMID:27128319
                                    
                                
                                    From data repositories to submission portals: rethinking the role of domain-specific databases in CollecTF. 
 PMID:27114493
                                    
                                
                                    Linking rare and common disease: mapping clinical disease-phenotypes to ontologies in therapeutic target validation. 
 PMID:27011785
                                    
                                
                                    The Disease Portals, disease-gene annotation and the RGD disease ontology at the Rat Genome Database. 
 PMID:27009807
                                    
                                
                                    Linking MedDRA(®)-Coded Clinical Phenotypes to Biological Mechanisms by the Ontology of Adverse Events: A Pilot Study on Tyrosine Kinase Inhibitors. 
 PMID:27003817
                                    
                                
                                    The UniProtKB guide to the human proteome. 
 PMID:26896845
                                    
                                
                                    An ontology for major histocompatibility restriction. 
 PMID:26759709
                                    
                                
                                    Enhanced annotations and features for comparing thousands of Pseudomonas genomes in the Pseudomonas genome database. 
 PMID:26578582
                                    
                                
                                    ANISEED 2015: a digital framework for the comparative developmental biology of ascidians. 
 PMID:26420834
                                    
                                
                                    Mouse genome annotation by the RefSeq project. 
 PMID:26215545
                                    
                                
                                    Every Site Counts: Submitting Transcription Factor-Binding Site Information through the CollecTF Portal. 
 PMID:26013488
                                    
                                
                                    The Confidence Information Ontology: a step towards a standard for asserting confidence in annotations. 
 PMID:25957950
                                    
                                
                                    The SwissLipids knowledgebase for lipid biology. 
 PMID:25943471
                                    
                                
                                    The role of ontologies in biological and biomedical research: a functional perspective. 
 PMID:25863278
                                    
                                
                                    Biochemical functional predictions for protein structures of unknown or uncertain function. 
 PMID:25848497
                                    
                                
                                    Key challenges for the creation and maintenance of specialist protein resources. 
 PMID:25820941
                                    
                                
                                    An ontology for microbial phenotypes. 
 PMID:25433798
                                    
                                
                                    The GOA database: gene Ontology annotation updates for 2015. 
 PMID:25378336
                                    
                                
                                    The complex portal--an encyclopaedia of macromolecular complexes. 
 PMID:25313161