Enzyme Structure Function Ontology
Names
More detailed information about this field from each metasource.
Enzyme Structure Function Ontology
metasource: Fairsharing.org
version: FAIRsharing.org: ESFO; Enzyme Structure Function Ontology; DOI: https://doi.org/10.25504/FAIRsharing.9y3gv0; Last edited: Dec. 18, 2019, 11:16 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: 1 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/ESFO
ESFO
metasource: Fairsharing.org
version: FAIRsharing.org: ESFO; Enzyme Structure Function Ontology; DOI: https://doi.org/10.25504/FAIRsharing.9y3gv0; Last edited: Dec. 18, 2019, 11:16 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: 1 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/ESFO
Names
More detailed information about this field from each metasource.
Enzyme Structure Function Ontology
metasource: Fairsharing.orgversion: FAIRsharing.org: ESFO; Enzyme Structure Function Ontology; DOI: https://doi.org/10.25504/FAIRsharing.9y3gv0; Last edited: Dec. 18, 2019, 11:16 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: 1 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/ESFO
ESFO
metasource: Fairsharing.orgversion: FAIRsharing.org: ESFO; Enzyme Structure Function Ontology; DOI: https://doi.org/10.25504/FAIRsharing.9y3gv0; Last edited: Dec. 18, 2019, 11:16 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: 1 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/ESFO
Names
More detailed information about this field from each metasource.
Enzyme Structure Function Ontology
metasource: Fairsharing.orgversion: FAIRsharing.org: ESFO; Enzyme Structure Function Ontology; DOI: https://doi.org/10.25504/FAIRsharing.9y3gv0; Last edited: Dec. 18, 2019, 11:16 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: 1 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/ESFO
ESFO
metasource: Fairsharing.orgversion: FAIRsharing.org: ESFO; Enzyme Structure Function Ontology; DOI: https://doi.org/10.25504/FAIRsharing.9y3gv0; Last edited: Dec. 18, 2019, 11:16 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: 1 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/ESFO
The ESFO provides a new paradigm for organizing enzyme sequence, structure, and function information, whereby specific elements of enzyme sequence and structure are mapped to specific conserved aspects of function, thus facilitating the functional annotation of uncharacterized enzymes. The ESFO helps prevent misannotation by emphasizing annotation of enzymes only at the level of functional granularity warranted by available information. The archive is a static snapshot of the data in the SFLD as of April 2019, and will not be updated
Description
More detailed information about this field from each metasource.
The ESFO provides a new paradigm for organizing enzyme sequence, structure, and function information, whereby specific elements of enzyme sequence and structure are mapped to specific conserved aspects of function, thus facilitating the functional annotation of uncharacterized enzymes. The ESFO helps prevent misannotation by emphasizing annotation of enzymes only at the level of functional granularity warranted by available information. The archive is a static snapshot of the data in the SFLD as of April 2019, and will not be updated
metasource: Fairsharing.orgversion: FAIRsharing.org: ESFO; Enzyme Structure Function Ontology; DOI: https://doi.org/10.25504/FAIRsharing.9y3gv0; Last edited: Dec. 18, 2019, 11:16 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
The ESFO provides a new paradigm for organizing enzyme sequence, structure, and function information, whereby specific elements of enzyme sequence and structure are mapped to specific conserved aspects of function, thus facilitating the functional annotation of uncharacterized enzymes. The ESFO helps prevent misannotation by emphasizing annotation of enzymes only at the level of functional granularity warranted by available information.
metasource: Biontology / Bioportalversion: 1 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/ESFO
Webpage:
http://sfld.rbvi.ucsf.edu/Webpage
More detailed information about this field from each metasource.
http://sfld.rbvi.ucsf.edu/
metasource: Fairsharing.orgversion: FAIRsharing.org: ESFO; Enzyme Structure Function Ontology; DOI: https://doi.org/10.25504/FAIRsharing.9y3gv0; Last edited: Dec. 18, 2019, 11:16 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: 1 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/ESFO
Publications:
Publications
More detailed information about this field from each metasource.
Biocuration in the structure-function linkage database: the anatomy of a superfamily
PMID: 28365730
metasource: Fairsharing.org
version: FAIRsharing.org: ESFO; Enzyme Structure Function Ontology; DOI: https://doi.org/10.25504/FAIRsharing.9y3gv0; Last edited: Dec. 18, 2019, 11:16 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
Publications
More detailed information about this field from each metasource.
Biocuration in the structure-function linkage database: the anatomy of a superfamily
PMID: 28365730
metasource: Fairsharing.org
version: FAIRsharing.org: ESFO; Enzyme Structure Function Ontology; DOI: https://doi.org/10.25504/FAIRsharing.9y3gv0; Last edited: Dec. 18, 2019, 11:16 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
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Biocuration in the structure-function linkage database: the anatomy of a superfamily
PubMed citations: 1.
1 articles citing: Biocuration in the structure-function linkage database: the anatomy of a superfamily
A strategy for large-scale comparison of evolutionary- and reaction-based classifications of enzyme function. PMID:32449511
Tags:
Tags
More detailed information about this field from each metasource.
annotation
metasource: Fairsharing.org
version: FAIRsharing.org: ESFO; Enzyme Structure Function Ontology; DOI: https://doi.org/10.25504/FAIRsharing.9y3gv0; Last edited: Dec. 18, 2019, 11:16 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
dna sequence data
metasource: Fairsharing.org
version: FAIRsharing.org: ESFO; Enzyme Structure Function Ontology; DOI: https://doi.org/10.25504/FAIRsharing.9y3gv0; Last edited: Dec. 18, 2019, 11:16 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
enzyme
metasource: Fairsharing.org
version: FAIRsharing.org: ESFO; Enzyme Structure Function Ontology; DOI: https://doi.org/10.25504/FAIRsharing.9y3gv0; Last edited: Dec. 18, 2019, 11:16 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
function analysis
metasource: Fairsharing.org
version: FAIRsharing.org: ESFO; Enzyme Structure Function Ontology; DOI: https://doi.org/10.25504/FAIRsharing.9y3gv0; Last edited: Dec. 18, 2019, 11:16 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
molecular structure
metasource: Fairsharing.org
version: FAIRsharing.org: ESFO; Enzyme Structure Function Ontology; DOI: https://doi.org/10.25504/FAIRsharing.9y3gv0; Last edited: Dec. 18, 2019, 11:16 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
protein structure
metasource: Fairsharing.org
version: FAIRsharing.org: ESFO; Enzyme Structure Function Ontology; DOI: https://doi.org/10.25504/FAIRsharing.9y3gv0; Last edited: Dec. 18, 2019, 11:16 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
sequence alignment
metasource: Fairsharing.org
version: FAIRsharing.org: ESFO; Enzyme Structure Function Ontology; DOI: https://doi.org/10.25504/FAIRsharing.9y3gv0; Last edited: Dec. 18, 2019, 11:16 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
Tags
More detailed information about this field from each metasource.
annotation
metasource: Fairsharing.orgversion: FAIRsharing.org: ESFO; Enzyme Structure Function Ontology; DOI: https://doi.org/10.25504/FAIRsharing.9y3gv0; Last edited: Dec. 18, 2019, 11:16 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
dna sequence data
metasource: Fairsharing.orgversion: FAIRsharing.org: ESFO; Enzyme Structure Function Ontology; DOI: https://doi.org/10.25504/FAIRsharing.9y3gv0; Last edited: Dec. 18, 2019, 11:16 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
enzyme
metasource: Fairsharing.orgversion: FAIRsharing.org: ESFO; Enzyme Structure Function Ontology; DOI: https://doi.org/10.25504/FAIRsharing.9y3gv0; Last edited: Dec. 18, 2019, 11:16 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
function analysis
metasource: Fairsharing.orgversion: FAIRsharing.org: ESFO; Enzyme Structure Function Ontology; DOI: https://doi.org/10.25504/FAIRsharing.9y3gv0; Last edited: Dec. 18, 2019, 11:16 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
molecular structure
metasource: Fairsharing.orgversion: FAIRsharing.org: ESFO; Enzyme Structure Function Ontology; DOI: https://doi.org/10.25504/FAIRsharing.9y3gv0; Last edited: Dec. 18, 2019, 11:16 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
protein structure
metasource: Fairsharing.orgversion: FAIRsharing.org: ESFO; Enzyme Structure Function Ontology; DOI: https://doi.org/10.25504/FAIRsharing.9y3gv0; Last edited: Dec. 18, 2019, 11:16 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
sequence alignment
metasource: Fairsharing.orgversion: FAIRsharing.org: ESFO; Enzyme Structure Function Ontology; DOI: https://doi.org/10.25504/FAIRsharing.9y3gv0; Last edited: Dec. 18, 2019, 11:16 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
dna sequences enzyme function analysis molecular structure protein structure sequence alignment
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