Ciona intestinalis Protein Database
Names
More detailed information about this field from each metasource.
Ciona intestinalis Protein Database
metasource: Fairsharing.org
version: FAIRsharing.org: CIPRO; Ciona intestinalis Protein Database; DOI: https://doi.org/10.25504/FAIRsharing.pep8cs; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
CIPRO
metasource: Fairsharing.org
version: FAIRsharing.org: CIPRO; Ciona intestinalis Protein Database; DOI: https://doi.org/10.25504/FAIRsharing.pep8cs; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
CIPRO 2.5
metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:00.969956
cipro_2.5
metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:00.969956
Names
More detailed information about this field from each metasource.
Ciona intestinalis Protein Database
metasource: Fairsharing.orgversion: FAIRsharing.org: CIPRO; Ciona intestinalis Protein Database; DOI: https://doi.org/10.25504/FAIRsharing.pep8cs; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
CIPRO
metasource: Fairsharing.orgversion: FAIRsharing.org: CIPRO; Ciona intestinalis Protein Database; DOI: https://doi.org/10.25504/FAIRsharing.pep8cs; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
CIPRO 2.5
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:32:00.969956
cipro_2.5
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:32:00.969956
Other names: CIPRO, CIPRO 2.5, cipro_2.5
Names
More detailed information about this field from each metasource.
Ciona intestinalis Protein Database
metasource: Fairsharing.orgversion: FAIRsharing.org: CIPRO; Ciona intestinalis Protein Database; DOI: https://doi.org/10.25504/FAIRsharing.pep8cs; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
CIPRO
metasource: Fairsharing.orgversion: FAIRsharing.org: CIPRO; Ciona intestinalis Protein Database; DOI: https://doi.org/10.25504/FAIRsharing.pep8cs; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
CIPRO 2.5
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:32:00.969956
cipro_2.5
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:32:00.969956
This source may no longer be available. No known URL could be resolved successfully.
CIPRO is an integrated protein that has been developed to provide widespread information of the proteins expressed in the ascidian Ciona intestinalis, especially for the researcher who wants to get advance and useful information for starting biological and biomedical research. The protein information in CIPRO directly links to gene expression, a tool for peptide mass fingerprinting (PMF), intracellular localization, 3D image of early development, and transgenic resources.
Description
More detailed information about this field from each metasource.
CIPRO is an integrated protein that has been developed to provide widespread information of the proteins expressed in the ascidian Ciona intestinalis, especially for the researcher who wants to get advance and useful information for starting biological and biomedical research. The protein information in CIPRO directly links to gene expression, a tool for peptide mass fingerprinting (PMF), intracellular localization, 3D image of early development, and transgenic resources.
metasource: Fairsharing.orgversion: FAIRsharing.org: CIPRO; Ciona intestinalis Protein Database; DOI: https://doi.org/10.25504/FAIRsharing.pep8cs; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
The CIPRO database provides comprehensive experimental and computational analytical results relatin to the Ciona intestinalis proteome. Data for each protein are summarized in graphically for a quick overview of all available information. Experimental data include 2D gel images, expression over developmental stages and tissues, and time-lapse data from developing embryos with gene expression data. Computational results include homology, secondary and three dimensional structure predictions, motifs, subcellular localization, transmembrane prediction, mendelian inheritance information of human homologue and gene ontology. CIPRO also provides tools for user data and accessibility, including full text search for any text fields, homology, 2D gel image, and peptide mass fingerprints.
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
The Ciona intestinalis protein database is an integrated protein database for the tunicate species C. intestinalis. The database collects published data as well as unique information from unpublished experimental data at various developmental stages, curated annotation data and various bioinformatic data. Homologs in humans and major model organisms are included. Annotations are open to evaluation by users through the CIPRO website.
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:32:00.969956
Webpage:
http://cipro.ibio.jp/current/Webpage
More detailed information about this field from each metasource.
http://cipro.ibio.jp/current/
metasource: Fairsharing.orgversion: FAIRsharing.org: CIPRO; Ciona intestinalis Protein Database; DOI: https://doi.org/10.25504/FAIRsharing.pep8cs; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
http://cipro.ibio.jp/2.5
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:00.969956
Publications:
Publications
More detailed information about this field from each metasource.
CIPRO 2.5: Ciona intestinalis protein database, a unique integrated repository of large-scale omics data, bioinformatic analyses and curated annotation, with user rating and reviewing functionality
PMID: 21071393
metasource: Fairsharing.org
version: FAIRsharing.org: CIPRO; Ciona intestinalis Protein Database; DOI: https://doi.org/10.25504/FAIRsharing.pep8cs; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:00.969956
Publications
More detailed information about this field from each metasource.
CIPRO 2.5: Ciona intestinalis protein database, a unique integrated repository of large-scale omics data, bioinformatic analyses and curated annotation, with user rating and reviewing functionality
PMID: 21071393
metasource: Fairsharing.org
version: FAIRsharing.org: CIPRO; Ciona intestinalis Protein Database; DOI: https://doi.org/10.25504/FAIRsharing.pep8cs; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:00.969956
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CIPRO 2.5: Ciona intestinalis protein database, a unique integrated repository of large-scale omics data, bioinformatic analyses and curated annotation, with user rating and reviewing functionality
PubMed citations: 9.
9 articles citing: CIPRO 2.5: Ciona intestinalis protein database, a unique integrated repository of large-scale omics data, bioinformatic analyses and curated annotation, with user rating and reviewing functionality
Fertilization of Ascidians: Gamete Interaction, Self/Nonself Recognition and Sperm Penetration of Egg Coat. PMID:35186958
A dynein-associated photoreceptor protein prevents ciliary acclimation to blue light. PMID:33637535
Effect of Polycyclic Aromatic Hydrocarbons on Development of the Ascidian Ciona intestinalis Type A. PMID:32093017
ANISEED 2017: extending the integrated ascidian database to the exploration and evolutionary comparison of genome-scale datasets. PMID:29149270
The Simple Chordate Ciona intestinalis Has a Reduced Complement of Genes Associated with Fanconi Anemia. PMID:27279728
Study of Cis-regulatory Elements in the Ascidian Ciona intestinalis. PMID:23997651
Purification of mitochondrial proteins HSP60 and ATP synthase from ascidian eggs: implications for antibody specificity. PMID:23326373
KEGG OC: a large-scale automatic construction of taxonomy-based ortholog clusters. PMID:23193276
Genetic and genomic toolbox of the chordate Ciona intestinalis. PMID:22964837
Tags:
Tags
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protein
metasource: Fairsharing.org
version: FAIRsharing.org: CIPRO; Ciona intestinalis Protein Database; DOI: https://doi.org/10.25504/FAIRsharing.pep8cs; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
genomics databases (non-vertebrate)
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
invertebrate genome databases
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
model organisms
metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:00.969956
proteins
metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:00.969956
proteomics
metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:00.969956
Tags
More detailed information about this field from each metasource.
protein
metasource: Fairsharing.orgversion: FAIRsharing.org: CIPRO; Ciona intestinalis Protein Database; DOI: https://doi.org/10.25504/FAIRsharing.pep8cs; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
genomics databases (non-vertebrate)
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
invertebrate genome databases
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
model organisms
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:32:00.969956
proteins
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:32:00.969956
proteomics
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:32:00.969956
protein genomics invertebrate genome model organisms proteins proteomics
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