Emerging Computational Approaches for Antimicrobial Peptide Discovery.
PMID:35884190
PR-1-Like Protein as a Potential Target for the Identification of Fusarium oxysporum: An In Silico Approach.
PMID:35822818
Anti-adhesion and Anti-inflammatory Potential of the Leaderless Class IIb Bacteriocin Enterocin DD14.
PMID:35604525
In Vitro and In Silico Based Approaches to Identify Potential Novel Bacteriocins from the Athlete Gut Microbiome of an Elite Athlete Cohort.
PMID:35456752
Traditional and Computational Screening of Non-Toxic Peptides and Approaches to Improving Selectivity.
PMID:35337121
Machine Learning Prediction of Antimicrobial Peptides.
PMID:35298806
Garvicin KS, a Broad-Spectrum Bacteriocin Protects Zebrafish Larvae against Lactococcus garvieae Infection.
PMID:35269976
Bacteriocin-Based Synergetic Consortia: a Promising Strategy to Enhance Antimicrobial Activity and Broaden the Spectrum of Inhibition.
PMID:35170996
Gastrointestinal Stability and Cytotoxicity of Bacteriocins From Gram-Positive and Gram-Negative Bacteria: A Comparative in vitro Study.
PMID:35145490
Targeted Genome Mining Reveals the Psychrophilic Clostridium estertheticum Complex as a Potential Source for Novel Bacteriocins, Including Cesin A and Estercticin A.
PMID:35095812
Identification and Characterization of a Two-Peptide Class IIb Bacteriocin in Streptococcus pluranimalium Isolated from the Nasal Cavity of a Healthy Pig.
PMID:35067836
Genome Mining of Pseudomonas Species: Diversity and Evolution of Metabolic and Biosynthetic Potential.
PMID:34946606
Susceptibility to Nisin, Bactofencin, Pediocin and Reuterin of Multidrug Resistant Staphylococcus aureus, Streptococcus dysgalactiae and Streptococcus uberis Causing Bovine Mastitis.
PMID:34827356
Gut Microbiota is an Important Source of Bacteriocins and Their In Situ Expression Can Be Explored for Treatment of Bacterial Infections.
PMID:34523112
Peptipedia: a user-friendly web application and a comprehensive database for peptide research supported by Machine Learning approach.
PMID:34478499
Genomic and proteomic comparisons of bacteriocins in probiotic species Lactobacillus and Bifidobacterium and inhibitory ability of Escherichia coli MG 1655.
PMID:34258243
Characterization of a Lactiplantibacillus plantarum R23 Isolated from Arugula by Whole-Genome Sequencing and Its Bacteriocin Production Ability.
PMID:34063896
In silico Approaches for the Design and Optimization of Interfering Peptides Against Protein-Protein Interactions.
PMID:33996914
Metagenomic analysis and antimicrobial activity of two fermented milk kefir samples.
PMID:33970536
The rumen eukaryotome is a source of novel antimicrobial peptides with therapeutic potential.
PMID:33832427
Genome Mining and Characterization of Biosynthetic Gene Clusters in Two Cave Strains of Paenibacillus sp.
PMID:33505378
Ensemble-AMPPred: Robust AMP Prediction and Recognition Using the Ensemble Learning Method with a New Hybrid Feature for Differentiating AMPs.
PMID:33494403
Natural bacterial isolates as an inexhaustible source of new bacteriocins.
PMID:33394148
Identification of biomarkers for the accurate and sensitive diagnosis of three bacterial pneumonia pathogens using in silico approaches.
PMID:33218302
High-quality genome sequence assembly of R.A73 Enterococcus faecium isolated from freshwater fish mucus.
PMID:33096980
Kunkecin A, a New Nisin Variant Bacteriocin Produced by the Fructophilic Lactic Acid Bacterium, Apilactobacillus kunkeei FF30-6 Isolated From Honey Bees.
PMID:33042078
Ocins database: a database of bug-busters from Bifidobacterium, Lactobacillus, and Enterococcus.
PMID:32974523
Bacteriocins as a new generation of antimicrobials: toxicity aspects and regulations.
PMID:32876664
Abundance, Diversity and Role of ICEs and IMEs in the Adaptation of Streptococcus salivarius to the Environment.
PMID:32858915
LAMP2: a major update of the database linking antimicrobial peptides.
PMID:32844169
Evidence Supporting an Antimicrobial Origin of Targeting Peptides to Endosymbiotic Organelles.
PMID:32731621
Proteomic Screening for Prediction and Design of Antimicrobial Peptides with AmpGram.
PMID:32560350
Lactobacillus acidophilus Membrane Vesicles as a Vehicle of Bacteriocin Delivery.
PMID:32425905
Evaluation of antibacterial properties of lactic acid bacteria from traditionally and industrially produced fermented sausages from Germany.
PMID:32160253
ADAPTABLE: a comprehensive web platform of antimicrobial peptides tailored to the user's research.
PMID:31740563
PARAGEN 1.0: A Standardized Synthetic Gene Library for Fast Cell-Free Bacteriocin Synthesis.
PMID:31552239
Bacterial Proteinaceous Compounds With Multiple Activities Toward Cancers and Microbial Infection.
PMID:31447795
Bacteriocin Occurrence and Activity in Escherichia coli Isolated from Bovines and Wastewater.
PMID:31443193
DRAMP 2.0, an updated data repository of antimicrobial peptides.
PMID:31409791
FeptideDB: A web application for new bioactive peptides from food protein.
PMID:31372542
Controlled release of nisin from Neusilin particles to enhance food safety of sour curd cheese.
PMID:30956342
Heterologous Machine Learning for the Identification of Antimicrobial Activity in Human-Targeted Drugs.
PMID:30935109
Microcin PDI Inhibits Antibiotic-Resistant Strains of Escherichia coli and Shigella through a Mechanism of Membrane Disruption and Protection by Homotrimer Self-Immunity.
PMID:30902857
Phenotypic and Genomic Properties of a Novel Deep-Lineage Haloalkaliphilic Member of the Phylum Balneolaeota From Soda Lakes Possessing Na+-Translocating Proteorhodopsin.
PMID:30483225
Identifying antimicrobial peptides using word embedding with deep recurrent neural networks.
PMID:30418485
dbAMP: an integrated resource for exploring antimicrobial peptides with functional activities and physicochemical properties on transcriptome and proteome data.
PMID:30380085
Engineered E. coli Nissle 1917 for the reduction of vancomycin-resistant Enterococcus in the intestinal tract.
PMID:30377660
Circular and Leaderless Bacteriocins: Biosynthesis, Mode of Action, Applications, and Prospects.
PMID:30233551
Genome Sequencing Reveals a Large and Diverse Repertoire of Antimicrobial Peptides.
PMID:30210481
Lactic Acid Bacteria in Finfish-An Update.
PMID:30147679
Comparative Genomics and Description of Putative Virulence Factors of Melissococcus plutonius, the Causative Agent of European Foulbrood Disease in Honey Bees.
PMID:30127293
The Genus Enterococcus: Between Probiotic Potential and Safety Concerns-An Update.
PMID:30123208
BLAST-XYPlot Viewer: A Tool for Performing BLAST in Whole-Genome Sequenced Bacteria/Archaea and Visualize Whole Results Simultaneously.
PMID:29789313
BAGEL4: a user-friendly web server to thoroughly mine RiPPs and bacteriocins.
PMID:29788290
SpirPep: an in silico digestion-based platform to assist bioactive peptides discovery from a genome-wide database.
PMID:29678128
Gut microbiota as a source of novel antimicrobials.
PMID:29584555
Complete genome sequence of Lactobacillus pentosus SLC13, isolated from mustard pickles, a potential probiotic strain with antimicrobial activity against foodborne pathogenic microorganisms.
PMID:29375672
Comparative genomic analysis of Brevibacterium strains: insights into key genetic determinants involved in adaptation to the cheese habitat.
PMID:29216827
Draft Genome Sequence of Staphylococcus aureus 4185, a Strain That Produces Aureocyclicin 4185.
PMID:29097478
The secondary metabolite bioinformatics portal: Computational tools to facilitate synthetic biology of secondary metabolite production.
PMID:29062930
A novel bacteriocin from Enterococcus faecalis 478 exhibits a potent activity against vancomycin-resistant enterococci.
PMID:29023515
Microbial abundance on the eggs of a passerine bird and related fitness consequences between urban and rural habitats.
PMID:28953940
Current Status and Future Prospects of Marine Natural Products (MNPs) as Antimicrobials.
PMID:28846659
In silico analysis of protein toxin and bacteriocins from Lactobacillus paracasei SD1 genome and available online databases.
PMID:28837656
RiPPMiner: a bioinformatics resource for deciphering chemical structures of RiPPs based on prediction of cleavage and cross-links.
PMID:28499008
Antimicrobial potential of bacteriocins in poultry and swine production.
PMID:28399941
The sil Locus in Streptococcus Anginosus Group: Interspecies Competition and a Hotspot of Genetic Diversity.
PMID:28119678
Bacteriocins: Not Only Antibacterial Agents.
PMID:27481236
DRAMP: a comprehensive data repository of antimicrobial peptides.
PMID:27075512
Genomic Features and Niche-Adaptation of Enterococcus faecium Strains from Korean Soybean-Fermented Foods.
PMID:27070419
Draft Genome Sequence of Enterococcus faecium Strain 58m, Isolated from Intestinal Tract Content of a Woolly Mammoth, Mammuthus primigenius.
PMID:26868396
Stability and Inhibitory Activity of Pediocin PA-1 Against Listeria sp. in Simulated Physiological Conditions of the Human Terminal Ileum.
PMID:26782185
SATPdb: a database of structurally annotated therapeutic peptides.
PMID:26527728
CAMPR3: a database on sequences, structures and signatures of antimicrobial peptides.
PMID:26467475
Genomic analyses of pneumococci reveal a wide diversity of bacteriocins - including pneumocyclicin, a novel circular bacteriocin.
PMID:26215050
Anti-proliferative effect on a colon adenocarcinoma cell line exerted by a membrane disrupting antimicrobial peptide KL15.
PMID:26147829
A large-scale structural classification of antimicrobial peptides.
PMID:26000295
Common occurrence of antibacterial agents in human intestinal microbiota.
PMID:25999943
Genome mining for ribosomally synthesized and post-translationally modified peptides (RiPPs) in anaerobic bacteria.
PMID:25407095
A non-pediocin low molecular weight antimicrobial peptide produced by Pediococcus pentosaceus strain IE-3 shows increased activity under reducing environment.
PMID:25158757
Emerging strategies and integrated systems microbiology technologies for biodiscovery of marine bioactive compounds.
PMID:24918453
Draft Genome Sequence of the Nonstarter Bacteriocin-Producing Strain Enterococcus mundtii CRL35.
PMID:24855298
Probiotics and antimicrobial peptides: the creatures' and substances' future in the twenty-first century: an opinion letter.
PMID:24832155
Prediction of linear cationic antimicrobial peptides based on characteristics responsible for their interaction with the membranes.
PMID:24730612
Antimicrobial peptides in the centipede Scolopendra subspinipes mutilans.
PMID:24652097
Database-Guided Discovery of Potent Peptides to Combat HIV-1 or Superbugs.
PMID:24276259
CAMP: Collection of sequences and structures of antimicrobial peptides.
PMID:24265220
LAMP: A Database Linking Antimicrobial Peptides.
PMID:23825543
BAGEL3: Automated identification of genes encoding bacteriocins and (non-)bactericidal posttranslationally modified peptides.
PMID:23677608
Class IIa bacteriocins: diversity and new developments.
PMID:23222636
Anti-infective properties of bacteriocins: an update.
PMID:23109101
EnzyBase: a novel database for enzybiotic studies.
PMID:22489867
Identification, purification and characterization of laterosporulin, a novel bacteriocin produced by Brevibacillus sp. strain GI-9.
PMID:22403615
Transcription analysis of a lantibiotic gene cluster from Bifidobacterium longum DJO10A.
PMID:21742926
Prediction of antimicrobial peptides based on sequence alignment and feature selection methods.
PMID:21533231
In silico analysis highlights the frequency and diversity of type 1 lantibiotic gene clusters in genome sequenced bacteria.
PMID:21118552
Complete genome sequence of Bifidobacterium longum subsp. longum BBMN68, a new strain from a healthy chinese centenarian.
PMID:21097614
Peptide antibiotic sensing and detoxification modules of Bacillus subtilis.
PMID:21078927