eagle-i Research Resource Ontology
Names
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eagle-i Research Resource Ontology
metasource: Fairsharing.org
version: FAIRsharing.org: ERO; eagle-i Research Resource Ontology; DOI: https://doi.org/10.25504/FAIRsharing.nwgynk; Last edited: Aug. 12, 2019, 3:51 p.m.; Last accessed: Jan 03 2022 7:13 p.m.
ERO
metasource: Fairsharing.org
version: FAIRsharing.org: ERO; eagle-i Research Resource Ontology; DOI: https://doi.org/10.25504/FAIRsharing.nwgynk; Last edited: Aug. 12, 2019, 3:51 p.m.; Last accessed: Jan 03 2022 7:13 p.m.
metasource: Biontology / Bioportal
version: 2013-08-02 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/ERO
Eagle-I Research Resource Ontology
metasource: Biontology / Bioportal
version: 2013-08-02 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/ERO
Names
More detailed information about this field from each metasource.
eagle-i Research Resource Ontology
metasource: Fairsharing.orgversion: FAIRsharing.org: ERO; eagle-i Research Resource Ontology; DOI: https://doi.org/10.25504/FAIRsharing.nwgynk; Last edited: Aug. 12, 2019, 3:51 p.m.; Last accessed: Jan 03 2022 7:13 p.m.
ERO
metasource: Fairsharing.orgversion: FAIRsharing.org: ERO; eagle-i Research Resource Ontology; DOI: https://doi.org/10.25504/FAIRsharing.nwgynk; Last edited: Aug. 12, 2019, 3:51 p.m.; Last accessed: Jan 03 2022 7:13 p.m.
metasource: Biontology / Bioportal
version: 2013-08-02 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/ERO
Eagle-I Research Resource Ontology
metasource: Biontology / Bioportalversion: 2013-08-02 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/ERO
Other names: ERO, Eagle-I Research Resource Ontology
Names
More detailed information about this field from each metasource.
eagle-i Research Resource Ontology
metasource: Fairsharing.orgversion: FAIRsharing.org: ERO; eagle-i Research Resource Ontology; DOI: https://doi.org/10.25504/FAIRsharing.nwgynk; Last edited: Aug. 12, 2019, 3:51 p.m.; Last accessed: Jan 03 2022 7:13 p.m.
ERO
metasource: Fairsharing.orgversion: FAIRsharing.org: ERO; eagle-i Research Resource Ontology; DOI: https://doi.org/10.25504/FAIRsharing.nwgynk; Last edited: Aug. 12, 2019, 3:51 p.m.; Last accessed: Jan 03 2022 7:13 p.m.
metasource: Biontology / Bioportal
version: 2013-08-02 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/ERO
Eagle-I Research Resource Ontology
metasource: Biontology / Bioportalversion: 2013-08-02 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/ERO
A unique feature of the eagle-i software is that the data collection and search tools are completely driven by ontologies. These ontologies are a set of modules that are written in the OWL language and edited and managed using Protégé. Beginning in 2009, the eagle-i Research Resource Ontology (ERO) was developed alongside the eagle-i applications to model various biomedical research resources such as instruments, Core Facilities, protocols, reagents, animal models and biospecimens. It has now been integrated into the VIVO-ISF Ontology, which leverages and expands upon both the eagle-i and VIVO ontologies to create a semantic framework that describes not only scientific resources but research activities and clinical activities.
Description
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A unique feature of the eagle-i software is that the data collection and search tools are completely driven by ontologies. These ontologies are a set of modules that are written in the OWL language and edited and managed using Protégé. Beginning in 2009, the eagle-i Research Resource Ontology (ERO) was developed alongside the eagle-i applications to model various biomedical research resources such as instruments, Core Facilities, protocols, reagents, animal models and biospecimens. It has now been integrated into the VIVO-ISF Ontology, which leverages and expands upon both the eagle-i and VIVO ontologies to create a semantic framework that describes not only scientific resources but research activities and clinical activities.
metasource: Fairsharing.orgversion: FAIRsharing.org: ERO; eagle-i Research Resource Ontology; DOI: https://doi.org/10.25504/FAIRsharing.nwgynk; Last edited: Aug. 12, 2019, 3:51 p.m.; Last accessed: Jan 03 2022 7:13 p.m.
This ontology models research resources such instruments. protocols, reagents, animal models and biospecimens. It has been developed in the context of the eagle-i project (http://eagle-i.net/).
metasource: Biontology / Bioportalversion: 2013-08-02 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/ERO
Webpage:
https://open.med.harvard.edu/wiki/display/eaglei/OntologyWebpage
More detailed information about this field from each metasource.
https://open.med.harvard.edu/wiki/display/eaglei/Ontology
metasource: Fairsharing.orgversion: FAIRsharing.org: ERO; eagle-i Research Resource Ontology; DOI: https://doi.org/10.25504/FAIRsharing.nwgynk; Last edited: Aug. 12, 2019, 3:51 p.m.; Last accessed: Jan 03 2022 7:13 p.m.
http://code.google.com/p/eagle-i/
metasource: Biontology / Bioportalversion: 2013-08-02 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/ERO
Licence:
Name: BSD-3-Clause License (Modified BSD License) (New BSD License)Licence name
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BSD-3-Clause License (Modified BSD License) (New BSD License)
metasource: Fairsharing.orgversion: FAIRsharing.org: ERO; eagle-i Research Resource Ontology; DOI: https://doi.org/10.25504/FAIRsharing.nwgynk; Last edited: Aug. 12, 2019, 3:51 p.m.; Last accessed: Jan 03 2022 7:13 p.m.
Licence URL
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https://opensource.org/licenses/BSD-3-Clause
metasource: Fairsharing.orgversion: FAIRsharing.org: ERO; eagle-i Research Resource Ontology; DOI: https://doi.org/10.25504/FAIRsharing.nwgynk; Last edited: Aug. 12, 2019, 3:51 p.m.; Last accessed: Jan 03 2022 7:13 p.m.
Publications:
Publications
More detailed information about this field from each metasource.
Research resources: curating the new eagle-i discovery system
PMID: 22434835
metasource: Fairsharing.org
version: FAIRsharing.org: ERO; eagle-i Research Resource Ontology; DOI: https://doi.org/10.25504/FAIRsharing.nwgynk; Last edited: Aug. 12, 2019, 3:51 p.m.; Last accessed: Jan 03 2022 7:13 p.m.
Automating data citation: the eagle-i experience
PMID: 29599662
metasource: Fairsharing.org
version: FAIRsharing.org: ERO; eagle-i Research Resource Ontology; DOI: https://doi.org/10.25504/FAIRsharing.nwgynk; Last edited: Aug. 12, 2019, 3:51 p.m.; Last accessed: Jan 03 2022 7:13 p.m.
http://code.google.com/p/eagle-i/wiki/Publications
metasource: Biontology / Bioportal
version: 2013-08-02 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/ERO
Publications
More detailed information about this field from each metasource.
Research resources: curating the new eagle-i discovery system
PMID: 22434835
metasource: Fairsharing.org
version: FAIRsharing.org: ERO; eagle-i Research Resource Ontology; DOI: https://doi.org/10.25504/FAIRsharing.nwgynk; Last edited: Aug. 12, 2019, 3:51 p.m.; Last accessed: Jan 03 2022 7:13 p.m.
Automating data citation: the eagle-i experience
PMID: 29599662
metasource: Fairsharing.org
version: FAIRsharing.org: ERO; eagle-i Research Resource Ontology; DOI: https://doi.org/10.25504/FAIRsharing.nwgynk; Last edited: Aug. 12, 2019, 3:51 p.m.; Last accessed: Jan 03 2022 7:13 p.m.
http://code.google.com/p/eagle-i/wiki/Publications
metasource: Biontology / Bioportalversion: 2013-08-02 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/ERO
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Research resources: curating the new eagle-i discovery system
PubMed citations: 19.
19 articles citing: Research resources: curating the new eagle-i discovery system
Integrated Collection of Stem Cell Bank Data, a Data Portal for Standardized Stem Cell Information. PMID:33740463
Knowledge Management for Fostering Biostatistical Collaboration within a Research Network: The RTRN Case Study. PMID:30424550
The Cellosaurus, a Cell-Line Knowledge Resource. PMID:29805321
Identifiers for the 21st century: How to design, provision, and reuse persistent identifiers to maximize utility and impact of life science data. PMID:28662064
Orchestrating differential data access for translational research: a pilot implementation. PMID:28330491
OOSTT: a Resource for Analyzing the Organizational Structures of Trauma Centers and Trauma Systems. PMID:28217041
AirLab: a cloud-based platform to manage and share antibody-based single-cell research. PMID:27356760
Raising the standards of stem cell line quality. PMID:26911906
Research Networking Systems: The State of Adoption at Institutions Aiming to Augment Translational Research Infrastructure. PMID:26491707
hPSCreg--the human pluripotent stem cell registry. PMID:26400179
Summarizing and visualizing structural changes during the evolution of biomedical ontologies using a Diff Abstraction Network. PMID:26048076
Finding collaborators: toward interactive discovery tools for research network systems. PMID:25370463
The Software Ontology (SWO): a resource for reproducibility in biomedical data analysis, curation and digital preservation. PMID:25068035
Semantics in support of biodiversity knowledge discovery: an introduction to the biological collections ontology and related ontologies. PMID:24595056
The CTSA Consortium's Catalog of Assets for Translational and Clinical Health Research (CATCHR). PMID:24456567
Developing a semantically rich ontology for the biobank-administration domain. PMID:24103726
On the reproducibility of science: unique identification of research resources in the biomedical literature. PMID:24032093
Query enhancement through the practical application of ontology: the IEDB and OBI. PMID:23734660
Dealing with data: a case study on information and data management literacy. PMID:22666180 -
Automating data citation: the eagle-i experience
PubMed citations: 0.
0 articles citing: Automating data citation: the eagle-i experience
- http://code.google.com/p/eagle-i/wiki/Publications
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biological sample
metasource: Fairsharing.org
version: FAIRsharing.org: ERO; eagle-i Research Resource Ontology; DOI: https://doi.org/10.25504/FAIRsharing.nwgynk; Last edited: Aug. 12, 2019, 3:51 p.m.; Last accessed: Jan 03 2022 7:13 p.m.
protocol
metasource: Fairsharing.org
version: FAIRsharing.org: ERO; eagle-i Research Resource Ontology; DOI: https://doi.org/10.25504/FAIRsharing.nwgynk; Last edited: Aug. 12, 2019, 3:51 p.m.; Last accessed: Jan 03 2022 7:13 p.m.
reagent
metasource: Fairsharing.org
version: FAIRsharing.org: ERO; eagle-i Research Resource Ontology; DOI: https://doi.org/10.25504/FAIRsharing.nwgynk; Last edited: Aug. 12, 2019, 3:51 p.m.; Last accessed: Jan 03 2022 7:13 p.m.
study design
metasource: Fairsharing.org
version: FAIRsharing.org: ERO; eagle-i Research Resource Ontology; DOI: https://doi.org/10.25504/FAIRsharing.nwgynk; Last edited: Aug. 12, 2019, 3:51 p.m.; Last accessed: Jan 03 2022 7:13 p.m.
Tags
More detailed information about this field from each metasource.
biological sample
metasource: Fairsharing.orgversion: FAIRsharing.org: ERO; eagle-i Research Resource Ontology; DOI: https://doi.org/10.25504/FAIRsharing.nwgynk; Last edited: Aug. 12, 2019, 3:51 p.m.; Last accessed: Jan 03 2022 7:13 p.m.
protocol
metasource: Fairsharing.orgversion: FAIRsharing.org: ERO; eagle-i Research Resource Ontology; DOI: https://doi.org/10.25504/FAIRsharing.nwgynk; Last edited: Aug. 12, 2019, 3:51 p.m.; Last accessed: Jan 03 2022 7:13 p.m.
reagent
metasource: Fairsharing.orgversion: FAIRsharing.org: ERO; eagle-i Research Resource Ontology; DOI: https://doi.org/10.25504/FAIRsharing.nwgynk; Last edited: Aug. 12, 2019, 3:51 p.m.; Last accessed: Jan 03 2022 7:13 p.m.
study design
metasource: Fairsharing.orgversion: FAIRsharing.org: ERO; eagle-i Research Resource Ontology; DOI: https://doi.org/10.25504/FAIRsharing.nwgynk; Last edited: Aug. 12, 2019, 3:51 p.m.; Last accessed: Jan 03 2022 7:13 p.m.
biological sample protocol reagent study design
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