UniCarb-DR
A repository of glycans with associated MS information and spectra. The repository allows researcher to submit their glycomics MS data for public display. The data is not curated by other than then data provider. Curated data will be transfered to UniCarb-DR
Description
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A repository of glycans with associated MS information and spectra. The repository allows researcher to submit their glycomics MS data for public display. The data is not curated by other than then data provider. Curated data will be transfered to UniCarb-DR
metasource: Fairsharing.orgversion: FAIRsharing.org: UniCarb-DR; UniCarb-DR; DOI: https://doi.org/10.25504/FAIRsharing.HZcqfR; Last edited: Feb. 26, 2020, 10:34 a.m.; Last accessed: Jan 03 2022 7:05 p.m.
Webpage:
http://www.unicarb-dr.orgWebpage
More detailed information about this field from each metasource.
http://www.unicarb-dr.org
metasource: Fairsharing.orgversion: FAIRsharing.org: UniCarb-DR; UniCarb-DR; DOI: https://doi.org/10.25504/FAIRsharing.HZcqfR; Last edited: Feb. 26, 2020, 10:34 a.m.; Last accessed: Jan 03 2022 7:05 p.m.
Licence:
Name: Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported (CC BY-NC-ND 3.0 )Licence name
More detailed information about this field from each metasource.
Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported (CC BY-NC-ND 3.0 )
metasource: Fairsharing.orgversion: FAIRsharing.org: UniCarb-DR; UniCarb-DR; DOI: https://doi.org/10.25504/FAIRsharing.HZcqfR; Last edited: Feb. 26, 2020, 10:34 a.m.; Last accessed: Jan 03 2022 7:05 p.m.
Licence URL
More detailed information about this field from each metasource.
https://creativecommons.org/licenses/by-nc-nd/3.0
metasource: Fairsharing.orgversion: FAIRsharing.org: UniCarb-DR; UniCarb-DR; DOI: https://doi.org/10.25504/FAIRsharing.HZcqfR; Last edited: Feb. 26, 2020, 10:34 a.m.; Last accessed: Jan 03 2022 7:05 p.m.
Publications:
Publications
More detailed information about this field from each metasource.
Towards a standardized bioinformatics infrastructure for N- and O-glycomics
PMID: 31332201
metasource: Fairsharing.org
version: FAIRsharing.org: UniCarb-DR; UniCarb-DR; DOI: https://doi.org/10.25504/FAIRsharing.HZcqfR; Last edited: Feb. 26, 2020, 10:34 a.m.; Last accessed: Jan 03 2022 7:05 p.m.
Publications
More detailed information about this field from each metasource.
Towards a standardized bioinformatics infrastructure for N- and O-glycomics
PMID: 31332201
metasource: Fairsharing.org
version: FAIRsharing.org: UniCarb-DR; UniCarb-DR; DOI: https://doi.org/10.25504/FAIRsharing.HZcqfR; Last edited: Feb. 26, 2020, 10:34 a.m.; Last accessed: Jan 03 2022 7:05 p.m.
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Towards a standardized bioinformatics infrastructure for N- and O-glycomics
PubMed citations: 29.
29 articles citing: Towards a standardized bioinformatics infrastructure for N- and O-glycomics
Circulating Glycan Monosaccharide Composite-Based Biomarker Diagnoses Colorectal Cancer at Early Stages and Predicts Prognosis. PMID:35574422
Immunoglobulin G N-glycan Biomarkers for Autoimmune Diseases: Current State and a Glycoinformatics Perspective. PMID:35563570
Bioinformatics in Immunoglobulin Glycosylation Analysis. PMID:34687011
Mass Spectrometry-Based Techniques to Elucidate the Sugar Code. PMID:34491038
StrucGP: de novo structural sequencing of site-specific N-glycan on glycoproteins using a modularization strategy. PMID:34341581
Glycan-mediated molecular interactions in bacterial pathogenesis. PMID:34274195
Glycan Compositions with GlyConnect Compozitor to Enhance Glycopeptide Identification. PMID:34236658
Glycoproteogenomics: Setting the Course for Next-generation Cancer Neoantigen Discovery for Cancer Vaccines. PMID:34118464
Cryo-EM structure of the mature and infective Mayaro virus at 4.4 Å resolution reveals features of arthritogenic alphaviruses. PMID:34031424
Characterization and statistical modeling of glycosylation changes in sickle cell disease. PMID:33666655
A Pragmatic Guide to Enrichment Strategies for Mass Spectrometry-Based Glycoproteomics. PMID:33583771
Integrated Glycoproteomics Identifies a Role of N-Glycosylation and Galectin-1 on Myogenesis and Muscle Development. PMID:33583770
High-Sensitivity Glycan Profiling of Blood-Derived Immunoglobulin G, Plasma, and Extracellular Vesicle Isolates with Capillary Zone Electrophoresis-Mass Spectrometry. PMID:33433994
Big-Data Glycomics: Tools to Connect Glycan Biosynthesis to Extracellular Communication. PMID:33349503
Insights into Bioinformatic Applications for Glycosylation: Instigating an Awakening towards Applying Glycoinformatic Resources for Cancer Diagnosis and Therapy. PMID:33302373
GlycoPOST realizes FAIR principles for glycomics mass spectrometry data. PMID:33174597
The international glycan repository GlyTouCan version 3.0. PMID:33125071
Databases and Bioinformatic Tools for Glycobiology and Glycoproteomics. PMID:32937895
Decrease of core 2 O-glycans on synovial lubricin in osteoarthritis reduces galectin-3 mediated crosslinking. PMID:32928962
How and why plants and human N-glycans are different: Insight from molecular dynamics into the "glycoblocks" architecture of complex carbohydrates. PMID:32874351
Differential O- and Glycosphingolipid Glycosylation in Human Pancreatic Adenocarcinoma Cells With Opposite Morphology and Metastatic Behavior. PMID:32582529
Promiscuity and specificity of eukaryotic glycosyltransferases. PMID:32539082
Bacteria-Catalyzed Arginine Glycosylation in Pathogens and Host. PMID:32411621
Glycomics and glycoproteomics of viruses: Mass spectrometry applications and insights toward structure-function relationships. PMID:32350911
Colorectal cancer cell lines show striking diversity of their O-glycome reflecting the cellular differentiation phenotype. PMID:32236654
Shotgun ion mobility mass spectrometry sequencing of heparan sulfate saccharides. PMID:32198425
Three distinct glycosylation pathways are involved in the decoration of Lactococcus lactis cell wall glycopolymers. PMID:32169901
Reference glycan structure libraries of primary human cardiomyocytes and pluripotent stem cell-derived cardiomyocytes reveal cell-type and culture stage-specific glycan phenotypes. PMID:31972267
Toward Automatic and Comprehensive Glycan Characterization by Online PGC-LC-EED MS/MS. PMID:31829560
Tags:
Tags
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mass spectrometry spectra
metasource: Fairsharing.org
version: FAIRsharing.org: UniCarb-DR; UniCarb-DR; DOI: https://doi.org/10.25504/FAIRsharing.HZcqfR; Last edited: Feb. 26, 2020, 10:34 a.m.; Last accessed: Jan 03 2022 7:05 p.m.
Tags
More detailed information about this field from each metasource.
mass spectrometry spectra
metasource: Fairsharing.orgversion: FAIRsharing.org: UniCarb-DR; UniCarb-DR; DOI: https://doi.org/10.25504/FAIRsharing.HZcqfR; Last edited: Feb. 26, 2020, 10:34 a.m.; Last accessed: Jan 03 2022 7:05 p.m.
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