Current structure predictors are not learning the physics of protein folding.
PMID:35099504
Interpreting a black box predictor to gain insights into early folding mechanisms.
PMID:34527196
ThermoScan: Semi-automatic Identification of Protein Stability Data From PubMed.
PMID:33842537
StructureDistiller: Structural relevance scoring identifies the most informative entries of a contact map.
PMID:31811259
Auto-encoding NMR chemical shifts from their native vector space to a residue-level biophysical index.
PMID:31175284
Application of an interpretable classification model on Early Folding Residues during protein folding.
PMID:30627219
Characterizing the relation of functional and Early Folding Residues in protein structures using the example of aminoacyl-tRNA synthetases.
PMID:30376559
A General Method for Predicting Amino Acid Residues Experiencing Hydrogen Exchange.
PMID:29780972
Exploring the Sequence-based Prediction of Folding Initiation Sites in Proteins.
PMID:28821744
DEOGEN2: prediction and interactive visualization of single amino acid variant deleteriousness in human proteins.
PMID:28498993
Early Folding Events, Local Interactions, and Conservation of Protein Backbone Rigidity.
PMID:26840723
The 2016 database issue of Nucleic Acids Research and an updated molecular biology database collection.
PMID:26740669