Biologically anchored knowledge expansion approach uncovers KLF4 as a novel insulin signaling regulator. 
 PMID:30240435
                                    
                                
                                    Controllability in an islet specific regulatory network identifies the transcriptional factor NFATC4, which regulates Type 2 Diabetes associated genes. 
 PMID:29977601
                                    
                                
                                    Module Anchored Network Inference: A Sequential Module-Based Approach to Novel Gene Network Construction from Genomic Expression Data on Human Disease Mechanism. 
 PMID:28197408
                                    
                                
                                    Estimation of Gene Regulatory Networks. 
 PMID:27595119
                                    
                                
                                    Data- and knowledge-based modeling of gene regulatory networks: an update. 
 PMID:27047314
                                    
                                
                                    PathwaysWeb: a gene pathways API with directional interactions, expanded gene ontology, and versioning. 
 PMID:26400039
                                    
                                
                                    RulNet: A Web-Oriented Platform for Regulatory Network Inference, Application to Wheat -Omics Data. 
 PMID:25993562
                                    
                                
                                    Systems Medicine: from molecular features and models to the clinic in COPD. 
 PMID:25471042
                                    
                                
                                    Gene regulatory networks and their applications: understanding biological and medical problems in terms of networks. 
 PMID:25364745
                                    
                                
                                    Relevance of different prior knowledge sources for inferring gene interaction networks. 
 PMID:25009552
                                    
                                
                                    Identifying pathogenic processes by integrating microarray data with prior knowledge. 
 PMID:24758699
                                    
                                
                                    Inference and validation of predictive gene networks from biomedical literature and gene expression data. 
 PMID:24691108
                                    
                                
                                    Inference of the Xenopus tropicalis embryonic regulatory network and spatial gene expression patterns. 
 PMID:24397936
                                    
                                
                                    Semantic integration of gene expression analysis tools and data sources using software connectors. 
 PMID:24341380
                                    
                                
                                    LegumeGRN: a gene regulatory network prediction server for functional and comparative studies. 
 PMID:23844010
                                    
                                
                                    Candidate gene association studies: a comprehensive guide to useful in silico tools. 
 PMID:23656885
                                    
                                
                                    Large-scale event extraction from literature with multi-level gene normalization. 
 PMID:23613707
                                    
                                
                                    Gene expression analysis uncovers novel hedgehog interacting protein (HHIP) effects in human bronchial epithelial cells. 
 PMID:23459001