Fission Yeast Phenotype Ontology
Names
More detailed information about this field from each metasource.
Fission Yeast Phenotype Ontology
metasource: Fairsharing.org
version: FAIRsharing.org: FYPO; Fission Yeast Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.4vr0ys; Last edited: Aug. 13, 2019, 4:31 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: 2022-10-13 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/FYPO
FYPO
metasource: Fairsharing.org
version: FAIRsharing.org: FYPO; Fission Yeast Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.4vr0ys; Last edited: Aug. 13, 2019, 4:31 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: 2022-10-13 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/FYPO
Names
More detailed information about this field from each metasource.
Fission Yeast Phenotype Ontology
metasource: Fairsharing.orgversion: FAIRsharing.org: FYPO; Fission Yeast Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.4vr0ys; Last edited: Aug. 13, 2019, 4:31 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: 2022-10-13 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/FYPO
FYPO
metasource: Fairsharing.orgversion: FAIRsharing.org: FYPO; Fission Yeast Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.4vr0ys; Last edited: Aug. 13, 2019, 4:31 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: 2022-10-13 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/FYPO
Names
More detailed information about this field from each metasource.
Fission Yeast Phenotype Ontology
metasource: Fairsharing.orgversion: FAIRsharing.org: FYPO; Fission Yeast Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.4vr0ys; Last edited: Aug. 13, 2019, 4:31 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: 2022-10-13 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/FYPO
FYPO
metasource: Fairsharing.orgversion: FAIRsharing.org: FYPO; Fission Yeast Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.4vr0ys; Last edited: Aug. 13, 2019, 4:31 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: 2022-10-13 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/FYPO
FYPO is being developed to support the comprehensive and detailed representation of phenotypes in PomBase, the online fission yeast resource (www.pombase.org). Its scope is similar to that of the Ascomycete Phenotype Ontology (APO), but FYPO includes more detailed pre-composed terms as well as computable definitions.
Description
More detailed information about this field from each metasource.
FYPO is being developed to support the comprehensive and detailed representation of phenotypes in PomBase, the online fission yeast resource (www.pombase.org). Its scope is similar to that of the Ascomycete Phenotype Ontology (APO), but FYPO includes more detailed pre-composed terms as well as computable definitions.
metasource: Fairsharing.orgversion: FAIRsharing.org: FYPO; Fission Yeast Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.4vr0ys; Last edited: Aug. 13, 2019, 4:31 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
Fission Yeast Phenotype Ontology
metasource: Biontology / Bioportalversion: 2022-10-13 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/FYPO
Webpage:
http://sourceforge.net/apps/trac/pombase/wiki/FissionYeastPhenotypeOntologyWebpage
More detailed information about this field from each metasource.
http://sourceforge.net/apps/trac/pombase/wiki/FissionYeastPhenotypeOntology
metasource: Fairsharing.orgversion: FAIRsharing.org: FYPO; Fission Yeast Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.4vr0ys; Last edited: Aug. 13, 2019, 4:31 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
https://github.com/pombase/fypo
metasource: Biontology / Bioportalversion: 2022-10-13 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/FYPO
Licence:
Name: Creative Commons Attribution 3.0 Unported (CC BY 3.0)Licence name
More detailed information about this field from each metasource.
Creative Commons Attribution 3.0 Unported (CC BY 3.0)
metasource: Fairsharing.orgversion: FAIRsharing.org: FYPO; Fission Yeast Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.4vr0ys; Last edited: Aug. 13, 2019, 4:31 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
Licence URL
More detailed information about this field from each metasource.
https://creativecommons.org/licenses/by/3.0/
metasource: Fairsharing.orgversion: FAIRsharing.org: FYPO; Fission Yeast Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.4vr0ys; Last edited: Aug. 13, 2019, 4:31 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
Publications:
Publications
More detailed information about this field from each metasource.
FYPO: the fission yeast phenotype ontology
PMID: 23658422
metasource: Fairsharing.org
version: FAIRsharing.org: FYPO; Fission Yeast Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.4vr0ys; Last edited: Aug. 13, 2019, 4:31 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
Publications
More detailed information about this field from each metasource.
FYPO: the fission yeast phenotype ontology
PMID: 23658422
metasource: Fairsharing.org
version: FAIRsharing.org: FYPO; Fission Yeast Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.4vr0ys; Last edited: Aug. 13, 2019, 4:31 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
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FYPO: the fission yeast phenotype ontology
PubMed citations: 33.
33 articles citing: FYPO: the fission yeast phenotype ontology
JaponicusDB: rapid deployment of a model organism database for an emerging model species. PMID:35380656
Fission stories: using PomBase to understand Schizosaccharomyces pombe biology. PMID:35100366
Functional profiling of long intergenic non-coding RNAs in fission yeast. PMID:34984977
Leveraging machine learning essentiality predictions and chemogenomic interactions to identify antifungal targets. PMID:34764269
Ancestry analysis indicates two different sets of essential genes in eukaryotic model species. PMID:34279742
Barcode sequencing and a high-throughput assay for chronological lifespan uncover ageing-associated genes in fission yeast. PMID:34250083
Insights from the reanalysis of high-throughput chemical genomics data for Escherichia coli K-12. PMID:33561236
Community curation in PomBase: enabling fission yeast experts to provide detailed, standardized, sharable annotation from research publications. PMID:32353878
Phenotype annotation with the ontology of microbial phenotypes (OMP). PMID:31307550
A Deep-sequencing-assisted, Spontaneous Suppressor Screen in the Fission Yeast Schizosaccharomyces pombe. PMID:30907886
Transposable element insertions in fission yeast drive adaptation to environmental stress. PMID:30541785
Gene Essentiality Analyzed by In Vivo Transposon Mutagenesis and Machine Learning in a Stable Haploid Isolate of Candida albicans. PMID:30377286
PomBase: The Scientific Resource for Fission Yeast. PMID:29761456
Identifying term relations cross different gene ontology categories. PMID:29297309
The anatomy of phenotype ontologies: principles, properties and applications. PMID:28387809
Tracking the evolution of 3D gene organization demonstrates its connection to phenotypic divergence. PMID:28369658
Genetic interactions and functional analyses of the fission yeast gsk3 and amk2 single and double mutants defective in TORC1-dependent processes. PMID:28281664
Identifying genes required for respiratory growth of fission yeast. PMID:27918601
Functional and regulatory profiling of energy metabolism in fission yeast. PMID:27887640
The cellular microscopy phenotype ontology. PMID:27195102
Emerging semantics to link phenotype and environment. PMID:26713234
AnGeLi: A Tool for the Analysis of Gene Lists from Fission Yeast. PMID:26635866
The Saccharomyces Genome Database: Exploring Biochemical Pathways and Mutant Phenotypes. PMID:26631123
An Ancient Yeast for Young Geneticists: A Primer on the Schizosaccharomyces pombe Model System. PMID:26447128
POEAS: Automated Plant Phenomic Analysis Using Plant Ontology. PMID:25574136
An ontology for microbial phenotypes. PMID:25433798
Cyclebase 3.0: a multi-organism database on cell-cycle regulation and phenotypes. PMID:25378319
PomBase 2015: updates to the fission yeast database. PMID:25361970
Ontology for the asexual development and anatomy of the colonial chordate Botryllus schlosseri. PMID:24789338
Phenotype ontologies and cross-species analysis for translational research. PMID:24699242
Canto: an online tool for community literature curation. PMID:24574118
The Drosophila phenotype ontology. PMID:24138933
The Vertebrate Trait Ontology: a controlled vocabulary for the annotation of trait data across species. PMID:23937709
Tags:
Tags
More detailed information about this field from each metasource.
gene ontology enrichment
metasource: Fairsharing.org
version: FAIRsharing.org: FYPO; Fission Yeast Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.4vr0ys; Last edited: Aug. 13, 2019, 4:31 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
phenotype
metasource: Fairsharing.org
version: FAIRsharing.org: FYPO; Fission Yeast Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.4vr0ys; Last edited: Aug. 13, 2019, 4:31 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
Tags
More detailed information about this field from each metasource.
gene ontology enrichment
metasource: Fairsharing.orgversion: FAIRsharing.org: FYPO; Fission Yeast Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.4vr0ys; Last edited: Aug. 13, 2019, 4:31 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
phenotype
metasource: Fairsharing.orgversion: FAIRsharing.org: FYPO; Fission Yeast Phenotype Ontology; DOI: https://doi.org/10.25504/FAIRsharing.4vr0ys; Last edited: Aug. 13, 2019, 4:31 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
gene ontology enrichment phenotype
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