Disbiome
Disbiome is a database covering microbial composition changes in different kinds of diseases. Disease names, detection methods or organism names can be used as search queries giving that return information related to the experiment (related disease/bacteria, abundancy subject/control, control type, detection method and related literature).
Description
More detailed information about this field from each metasource.
Disbiome is a database covering microbial composition changes in different kinds of diseases. Disease names, detection methods or organism names can be used as search queries giving that return information related to the experiment (related disease/bacteria, abundancy subject/control, control type, detection method and related literature).
metasource: Fairsharing.orgversion: FAIRsharing.org: Disbiome; Disbiome; DOI: https://doi.org/10.25504/FAIRsharing.lFdTxB; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
Webpage:
https://disbiome.ugent.beWebpage
More detailed information about this field from each metasource.
https://disbiome.ugent.be
metasource: Fairsharing.orgversion: FAIRsharing.org: Disbiome; Disbiome; DOI: https://doi.org/10.25504/FAIRsharing.lFdTxB; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
Licence:
Name: Creative Commons CC0 1.0 Universal (CC0 1.0) Public Domain DedicationLicence name
More detailed information about this field from each metasource.
Creative Commons CC0 1.0 Universal (CC0 1.0) Public Domain Dedication
metasource: Fairsharing.orgversion: FAIRsharing.org: Disbiome; Disbiome; DOI: https://doi.org/10.25504/FAIRsharing.lFdTxB; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
Licence URL
More detailed information about this field from each metasource.
https://creativecommons.org/publicdomain/zero/1.0/
metasource: Fairsharing.orgversion: FAIRsharing.org: Disbiome; Disbiome; DOI: https://doi.org/10.25504/FAIRsharing.lFdTxB; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
Publications:
Publications
More detailed information about this field from each metasource.
Disbiome database: linking the microbiome to disease
PMID: 29866037
metasource: Fairsharing.org
version: FAIRsharing.org: Disbiome; Disbiome; DOI: https://doi.org/10.25504/FAIRsharing.lFdTxB; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
Publications
More detailed information about this field from each metasource.
Disbiome database: linking the microbiome to disease
PMID: 29866037
metasource: Fairsharing.org
version: FAIRsharing.org: Disbiome; Disbiome; DOI: https://doi.org/10.25504/FAIRsharing.lFdTxB; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
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Disbiome database: linking the microbiome to disease
PubMed citations: 37.
37 articles citing: Disbiome database: linking the microbiome to disease
The quorum sensing peptide EntF* promotes colorectal cancer metastasis in mice: a new factor in the host-microbiome interaction. PMID:35761265
Metapath Aggregated Graph Neural Network and Tripartite Heterogeneous Networks for Microbe-Disease Prediction. PMID:35711758
Annexin-A1 deficiency attenuates stress-induced tumor growth via fatty acid metabolism in mice: an Integrated multiple omics analysis on the stress- microbiome-metabolite-epigenetic-oncology (SMMEO) axis. PMID:35664067
Murine Model for Measuring Effects of Humanized-Dosing of Antibiotics on the Gut Microbiome. PMID:35250930
GMrepo v2: a curated human gut microbiome database with special focus on disease markers and cross-dataset comparison. PMID:34788838
Effect of organic acids-essential oils blend and oat fiber combination on broiler chicken growth performance, blood parameters, and intestinal health. PMID:34738034
mBodyMap: a curated database for microbes across human body and their associations with health and diseases. PMID:34718713
Mining microbe-disease interactions from literature via a transfer learning model. PMID:34507528
Machine Learning Uncovers Adverse Drug Effects on Intestinal Bacteria. PMID:34371718
A Metabolic Model of Intestinal Secretions: The Link between Human Microbiota and Colorectal Cancer Progression. PMID:34357350
Prioritizing Disease-Related Microbes Based on the Topological Properties of a Comprehensive Network. PMID:34326821
Towards multi-label classification: Next step of machine learning for microbiome research. PMID:34093989
PapRIV, a BV-2 microglial cell activating quorum sensing peptide. PMID:34021199
Immunological design of commensal communities to treat intestinal infection and inflammation. PMID:33465156
MicroPhenoDB Associates Metagenomic Data with Pathogenic Microbes, Microbial Core Genes, and Human Disease Phenotypes. PMID:33418085
Comprehensive Survey of the Litter Bacterial Communities in Commercial Turkey Farms. PMID:33344533
Microbe-set enrichment analysis facilitates functional interpretation of microbiome profiling data. PMID:33293650
Predicting the relationships between gut microbiota and mental disorders with knowledge graphs. PMID:33262885
A meta-analysis of the effect of binge drinking on the oral microbiome and its relation to Alzheimer's disease. PMID:33199776
MASI: microbiota-active substance interactions database. PMID:33125077
Human Gut Microbiome Response to Short-Term Bifidobacterium-Based Probiotic Treatment. PMID:33087994
Peryton: a manual collection of experimentally supported microbe-disease associations. PMID:33080028
GIMICA: host genetic and immune factors shaping human microbiota. PMID:33045729
CoMNRank: An integrated approach to extract and prioritize human microbial metabolites from MEDLINE records. PMID:32791237
Automatic extraction, prioritization and analysis of gut microbial metabolites from biomedical literature. PMID:32561832
Human microbiome: an academic update on human body site specific surveillance and its possible role. PMID:32524177
Advancing functional and translational microbiome research using meta-omics approaches. PMID:31810497
gutMDisorder: a comprehensive database for dysbiosis of the gut microbiota in disorders and interventions. PMID:31584099
The Potential Impact of Probiotics on the Gut Microbiome of Athletes. PMID:31546638
Altered Fecal Small RNA Profiles in Colorectal Cancer Reflect Gut Microbiome Composition in Stool Samples. PMID:31530647
Evaluation of the Antimicrobial and Anti-inflammatory Properties of Bacillus-DFM (Norum™) in Broiler Chickens Infected With Salmonella Enteritidis. PMID:31508436
Challenges in the construction of knowledge bases for human microbiome-disease associations. PMID:31488215
Establishing What Constitutes a Healthy Human Gut Microbiome: State of the Science, Regulatory Considerations, and Future Directions. PMID:31373365
Antioxidant Defence Systems and Oxidative Stress in Poultry Biology: An Update. PMID:31336672
Systems biology in inflammatory bowel diseases: on the way to precision medicine. PMID:31040620
Characterization of Microbiota Associated with Digesta and Mucosa in Different Regions of Gastrointestinal Tract of Nursery Pigs. PMID:30986907
Does the antidiabetic drug metformin affect embryo development and the health of brown trout (Salmo trutta f. fario)? PMID:30595998
Tags:
Tags
More detailed information about this field from each metasource.
diabetes mellitus
metasource: Fairsharing.org
version: FAIRsharing.org: Disbiome; Disbiome; DOI: https://doi.org/10.25504/FAIRsharing.lFdTxB; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
disease
metasource: Fairsharing.org
version: FAIRsharing.org: Disbiome; Disbiome; DOI: https://doi.org/10.25504/FAIRsharing.lFdTxB; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
kidney disease
metasource: Fairsharing.org
version: FAIRsharing.org: Disbiome; Disbiome; DOI: https://doi.org/10.25504/FAIRsharing.lFdTxB; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
liver
metasource: Fairsharing.org
version: FAIRsharing.org: Disbiome; Disbiome; DOI: https://doi.org/10.25504/FAIRsharing.lFdTxB; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
liver disease
metasource: Fairsharing.org
version: FAIRsharing.org: Disbiome; Disbiome; DOI: https://doi.org/10.25504/FAIRsharing.lFdTxB; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
microbiome
metasource: Fairsharing.org
version: FAIRsharing.org: Disbiome; Disbiome; DOI: https://doi.org/10.25504/FAIRsharing.lFdTxB; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
parkinson's disease
metasource: Fairsharing.org
version: FAIRsharing.org: Disbiome; Disbiome; DOI: https://doi.org/10.25504/FAIRsharing.lFdTxB; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
Tags
More detailed information about this field from each metasource.
diabetes mellitus
metasource: Fairsharing.orgversion: FAIRsharing.org: Disbiome; Disbiome; DOI: https://doi.org/10.25504/FAIRsharing.lFdTxB; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
disease
metasource: Fairsharing.orgversion: FAIRsharing.org: Disbiome; Disbiome; DOI: https://doi.org/10.25504/FAIRsharing.lFdTxB; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
kidney disease
metasource: Fairsharing.orgversion: FAIRsharing.org: Disbiome; Disbiome; DOI: https://doi.org/10.25504/FAIRsharing.lFdTxB; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
liver
metasource: Fairsharing.orgversion: FAIRsharing.org: Disbiome; Disbiome; DOI: https://doi.org/10.25504/FAIRsharing.lFdTxB; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
liver disease
metasource: Fairsharing.orgversion: FAIRsharing.org: Disbiome; Disbiome; DOI: https://doi.org/10.25504/FAIRsharing.lFdTxB; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
microbiome
metasource: Fairsharing.orgversion: FAIRsharing.org: Disbiome; Disbiome; DOI: https://doi.org/10.25504/FAIRsharing.lFdTxB; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
parkinson's disease
metasource: Fairsharing.orgversion: FAIRsharing.org: Disbiome; Disbiome; DOI: https://doi.org/10.25504/FAIRsharing.lFdTxB; Last edited: Sept. 20, 2019, 11:51 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
diabetes mellitus disease kidney disease liver liver disease microbiome parkinson's disease
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