DIANA-miRGen
Provides accurate cell-line-specific miRNA gene transcription start sites, coupled with genome-wide maps of transcription factor binding sites in order to unveil the mechanisms of miRNA transcription regulation. The database schema and web interface facilitates user interaction, provides advanced queries and innate connection with other DIANA resources for miRNA target identification and pathway analysis.
Description
More detailed information about this field from each metasource.
Provides accurate cell-line-specific miRNA gene transcription start sites, coupled with genome-wide maps of transcription factor binding sites in order to unveil the mechanisms of miRNA transcription regulation. The database schema and web interface facilitates user interaction, provides advanced queries and innate connection with other DIANA resources for miRNA target identification and pathway analysis.
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:32:07.319245
Webpage:
http://www.microrna.gr/mirgenWebpage
More detailed information about this field from each metasource.
http://www.microrna.gr/mirgen
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:32:07.319245
Publications:
Publications
More detailed information about this field from each metasource.
miRGen: a database for the study of animal microRNA genomic organization and function
PMID: 17108354
metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:07.319245
miRGen 2.0: a database of microRNA genomic information and regulation
PMID: 19850714
metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:07.319245
DIANA-miRGen v3.0: accurate characterization of microRNA promoters and their regulators
PMID: 26586797
metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:07.319245
Publications
More detailed information about this field from each metasource.
miRGen: a database for the study of animal microRNA genomic organization and function
PMID: 17108354
metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:07.319245
miRGen 2.0: a database of microRNA genomic information and regulation
PMID: 19850714
metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:07.319245
DIANA-miRGen v3.0: accurate characterization of microRNA promoters and their regulators
PMID: 26586797
metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:07.319245
-
miRGen: a database for the study of animal microRNA genomic organization and function
PubMed citations: 127.
127 articles citing: miRGen: a database for the study of animal microRNA genomic organization and function
The Role of Non-Coding RNAs in Autophagy During Carcinogenesis. PMID:35309939
Endogenous Controls for the Evaluation of Osteoarthritis-Related miRNAs in Extracellular Vesicles from Bone-Marrow-Derived Mesenchymal Stromal Cells and the Impact of Osteoarthritis Synovial Fluid. PMID:35204816
MIMRDA: A Method Incorporating the miRNA and mRNA Expression Profiles for Predicting miRNA-Disease Associations to Identify Key miRNAs (microRNAs). PMID:35154284
MicroRNA-16 Restores Sensitivity to Tyrosine Kinase Inhibitors and Outperforms MEK Inhibitors in KRAS-Mutated Non-Small Cell Lung Cancer. PMID:34948154
The MicroRNA Landscape of Acute Beta Cell Destruction in Type 1 Diabetic Recipients of Intraportal Islet Grafts. PMID:34359863
Identification of the canonical and noncanonical role of miR-143/145 in estrogen-deficient bone loss. PMID:33859759
Telomerase reverse transcriptase activates transcription of miR500A to inhibit Hedgehog signalling and promote cell invasiveness. PMID:33713376
MicroRNA retrocopies generated via L1-mediated retrotransposition in placental mammals help to reveal how their parental genes were transcribed. PMID:33244051
miRNA Reference Genes in Extracellular Vesicles Released from Amniotic Membrane-Derived Mesenchymal Stromal Cells. PMID:32290510
FCMDAP: using miRNA family and cluster information to improve the prediction accuracy of disease related miRNAs. PMID:30953512
Microarray Data Analysis of Molecular Mechanism Associated with Stroke Progression. PMID:30610589
Visualization and Analysis of MicroRNAs within KEGG Pathways using VANESA. PMID:28609293
Expression, regulation and function of miR-495 in healthy and tumor tissues. PMID:28454357
Two White Spot Syndrome Virus MicroRNAs Target the Dorsal Gene To Promote Virus Infection in Marsupenaeus japonicus Shrimp. PMID:28179524
Potential diagnostic implications of miR-144 overexpression in human oesophageal cancer. PMID:27748283
ChemiRs: a web application for microRNAs and chemicals. PMID:27091357
MicroRNA-93 may control vascular endothelial growth factor A in circulating peripheral blood mononuclear cells in acute Kawasaki disease. PMID:27089500
Systems psychopharmacology: A network approach to developing novel therapies. PMID:27014599
Sertoli Cell-Only Syndrome: Behind the Genetic Scenes. PMID:26925412
Controlled ovarian hyperstimulation induced changes in the expression of circulatory miRNA in bovine follicular fluid and blood plasma. PMID:26645573
DIANA-miRGen v3.0: accurate characterization of microRNA promoters and their regulators. PMID:26586797
Identification of Aberrant Chromosomal Regions in Human Breast Cancer Using Gene Expression Data and Related Gene Information. PMID:26319982
Growth of glioblastoma is inhibited by miR-133-mediated EGFR suppression. PMID:26138587
Impairment of growth of gastric carcinoma by miR-133-mediated Her-2 inhibition. PMID:26076812
MiR-335 Regulates Hif-1α to Reduce Cell Death in Both Mouse Cell Line and Rat Ischemic Models. PMID:26030758
MiR-429 inhibits oral squamous cell carcinoma growth by targeting ZEB1. PMID:25640197
The characterization of microRNA-mediated gene regulation as impacted by both target site location and seed match type. PMID:25238537
Maternal diet-induced microRNAs and mTOR underlie β cell dysfunction in offspring. PMID:25180600
MiR-451 suppresses cell proliferation and metastasis in A549 lung cancer cells. PMID:25150396
MicroRNA-340 as a modulator of RAS-RAF-MAPK signaling in melanoma. PMID:25043973
OMIT: dynamic, semi-automated ontology development for the microRNA domain. PMID:25025130
MicroRNA Target Identification-Experimental Approaches. PMID:24832658
Acute exercise leads to regulation of telomere-associated genes and microRNA expression in immune cells. PMID:24752326
Overexpression of miR-125a in myelodysplastic syndrome CD34+ cells modulates NF-κB activation and enhances erythroid differentiation arrest. PMID:24690917
OncomiRdbB: a comprehensive database of microRNAs and their targets in breast cancer. PMID:24428888
MiR-200a is involved in proliferation and apoptosis in the human endometrial adenocarcinoma cell line HEC-1B by targeting the tumor suppressor PTEN. PMID:24413994
Mmu-miR-193 is involved in embryo implantation in mouse uterus by regulating GRB7 gene expression. PMID:24336674
MicroRNAs: fundamental regulators of gene expression in major affective disorders and suicidal behavior? PMID:24298237
Deep sequencing of small RNA repertoires in mice reveals metabolic disorders-associated hepatic miRNAs. PMID:24260478
Target Gene and Function Prediction of Differentially Expressed MicroRNAs in Lactating Mammary Glands of Dairy Goats. PMID:24195063
A component of the mir-17-92 polycistronic oncomir promotes oncogene-dependent apoptosis. PMID:24137534
In-Silico Algorithms for the Screening of Possible microRNA Binding Sites and Their Interactions. PMID:24082822
Possible roles of mmu-miR-141 in the endometrium of mice in early pregnancy following embryo implantation. PMID:23825654
BCL11A overexpression predicts survival and relapse in non-small cell lung cancer and is modulated by microRNA-30a and gene amplification. PMID:23758992
Mmu-microRNA-200a overexpression leads to implantation defect by targeting phosphatase and tensin homolog in mouse uterus. PMID:23690337
TUMIR: an experimentally supported database of microRNA deregulation in various cancers. PMID:23594715
mir-17-92: a polycistronic oncomir with pleiotropic functions. PMID:23550645
Decreased cortical muscarinic M1 receptors in schizophrenia are associated with changes in gene promoter methylation, mRNA and gene targeting microRNA. PMID:23423139
MicroRNAs miR-26a, miR-26b, and miR-29b accelerate osteogenic differentiation of unrestricted somatic stem cells from human cord blood. PMID:23418963
Minireview: miRomics in endocrinology: a novel approach for modeling endocrine diseases. PMID:23349525
Expression analysis in multiple muscle groups and serum reveals complexity in the microRNA transcriptome of the mdx mouse with implications for therapy. PMID:23344181
MicroRNA-centric measurement improves functional enrichment analysis of co-expressed and differentially expressed microRNA clusters. PMID:23281707
Bioinformatics Resource Manager v2.3: an integrated software environment for systems biology with microRNA and cross-species analysis tools. PMID:23174015
A systematic screen reveals MicroRNA clusters that significantly regulate four major signaling pathways. PMID:23144891
Alternative mRNA fates identified in microRNA-associated transcriptome analysis. PMID:23083446
A role for microRNA-155 modulation in the anti-HIV-1 effects of Toll-like receptor 3 stimulation in macrophages. PMID:23028330
miRNA expression profile in primary gastric cancers and paired lymph node metastases indicates that miR-10a plays a role in metastasis from primary gastric cancer to lymph nodes. PMID:22969895
Lung cancer: microRNA and target database. PMID:22814263
Role of MicroRNAs in Fibrosis. PMID:22802911
EMT and induction of miR-21 mediate metastasis development in Trp53-deficient tumours. PMID:22666537
MYC is activated by USP2a-mediated modulation of microRNAs in prostate cancer. PMID:22585994
Oncosuppressive role of p53-induced miR-205 in triple negative breast cancer. PMID:22578566
Pri-miR-17-92a transcript folds into a tertiary structure and autoregulates its processing. PMID:22450760
MicroRNAs in autophagy and their emerging roles in crosstalk with apoptosis. PMID:22441107
MiR-155 is a liposarcoma oncogene that targets casein kinase-1α and enhances β-catenin signaling. PMID:22350414
Quantification of miRNA-mRNA interactions. PMID:22348024
MicroRNAs and their roles in osteoclast differentiation. PMID:22198753
Regulatory coordination of clustered microRNAs based on microRNA-transcription factor regulatory network. PMID:22176772
Computational methods for the identification of microRNA targets. PMID:22162940
Comprehensive analysis of microRNA genomic loci identifies pervasive repetitive-element origins. PMID:22016841
MiR-29a inhibits cell proliferation and induces cell cycle arrest through the downregulation of p42.3 in human gastric cancer. PMID:21998710
miRTar: an integrated system for identifying miRNA-target interactions in human. PMID:21791068
MicroRNA-138 suppresses epithelial-mesenchymal transition in squamous cell carcinoma cell lines. PMID:21770894
MicroRNA expression profiling reveals miRNA families regulating specific biological pathways in mouse frontal cortex and hippocampus. PMID:21731767
The characterisation of three types of genes that overlie copy number variable regions. PMID:21637334
miRvestigator: web application to identify miRNAs responsible for co-regulated gene expression patterns discovered through transcriptome profiling. PMID:21602264
MiR-21 plays an important role in radiation induced carcinogenesis in BALB/c mice by directly targeting the tumor suppressor gene Big-h3. PMID:21494432
Potential role of miRNAs in developmental haemostasis. PMID:21408009
Identification of microRNA-mRNA modules using microarray data. PMID:21375780
MicroRNAs MiR-17, MiR-20a, and MiR-106b act in concert to modulate E2F activity on cell cycle arrest during neuronal lineage differentiation of USSC. PMID:21283765
Integrated analysis of mutations, miRNA and mRNA expression in glioblastoma. PMID:21114830
Identification and experimental validation of G protein alpha inhibiting activity polypeptide 2 (GNAI2) as a microRNA-138 target in tongue squamous cell carcinoma. PMID:21079996
Cell-free miRNAs may indicate diagnosis and docetaxel sensitivity of tumor cells in malignant effusions. PMID:21029414
Assessment of mRNA and microRNA Stabilization in Peripheral Human Blood for Multicenter Studies and Biobanks. PMID:20981139
Identification of restricted subsets of mature microRNA abnormally expressed in inactive colonic mucosa of patients with inflammatory bowel disease. PMID:20957151
Toward a complete in silico, multi-layered embryonic stem cell regulatory network. PMID:20890967
Role of microRNA-199a-5p and discoidin domain receptor 1 in human hepatocellular carcinoma invasion. PMID:20799954
Putative tumor suppressor miR-145 inhibits colon cancer cell growth by targeting oncogene Friend leukemia virus integration 1 gene. PMID:20737575
Low doses of the carcinogen furan alter cell cycle and apoptosis gene expression in rat liver independent of DNA methylation. PMID:20562052
Identifying mRNA targets of microRNA dysregulated in cancer: with application to clear cell Renal Cell Carcinoma. PMID:20420713
Systematic comparison of microarray profiling, real-time PCR, and next-generation sequencing technologies for measuring differential microRNA expression. PMID:20360395
Role of miR-34c microRNA in the late steps of spermatogenesis. PMID:20150330
miRMaid: a unified programming interface for microRNA data resources. PMID:20074352
Regulation of microRNA biosynthesis and expression in 2102Ep embryonal carcinoma stem cells is mirrored in ovarian serous adenocarcinoma patients. PMID:20015364
Computational approaches for microRNA studies: a review. PMID:20012966
Insight into microRNA regulation by analyzing the characteristics of their targets in humans. PMID:20003303
Consensus miRNA expression profiles derived from interplatform normalization of microarray data. PMID:19948767
MiR-15a and MiR-16 control Bmi-1 expression in ovarian cancer. PMID:19903841
miRGen 2.0: a database of microRNA genomic information and regulation. PMID:19850714
Combinatorial network of primary and secondary microRNA-driven regulatory mechanisms. PMID:19671526
Coupled RNA processing and transcription of intergenic primary microRNAs. PMID:19667074
Human microRNA target analysis and gene ontology clustering by GOmir, a novel stand-alone application. PMID:19534746
A novel and universal method for microRNA RT-qPCR data normalization. PMID:19531210
C19MC microRNAs are processed from introns of large Pol-II, non-protein-coding transcripts. PMID:19339516
Correlation of microRNA levels during hypoxia with predicted target mRNAs through genome-wide microarray analysis. PMID:19320992
Identification of microRNAs with regulatory potential using a matched microRNA-mRNA time-course data. PMID:19295134
Primary microRNA transcripts are processed co-transcriptionally. PMID:19172742
Cellular versus viral microRNAs in host-virus interaction. PMID:19095692
MicroRNA-regulated pathways associated with endometriosis. PMID:19074548
Geographical mapping of a multifocal thyroid tumour using genetic alteration analysis & miRNA profiling. PMID:19055826
Differentiation stage-specific expression of microRNAs in B lymphocytes and diffuse large B-cell lymphomas. PMID:19047678
miRecords: an integrated resource for microRNA-target interactions. PMID:18996891
miR2Disease: a manually curated database for microRNA deregulation in human disease. PMID:18927107
CoGemiR: a comparative genomics microRNA database. PMID:18837977
Preferential regulation of duplicated genes by microRNAs in mammals. PMID:18727826
MicroRNA regulation and the variability of human cortical gene expression. PMID:18617573
A computational screen for mouse signaling pathways targeted by microRNA clusters. PMID:18511500
Potential role of miR-9 and miR-223 in recurrent ovarian cancer. PMID:18442408
miRDB: a microRNA target prediction and functional annotation database with a wiki interface. PMID:18426918
The microRNA.org resource: targets and expression. PMID:18158296
Investigation of miRNA biology by bioinformatic tools and impact of miRNAs in colorectal cancer--regulatory relationship of c-Myc and p53 with miRNAs. PMID:18079974
miRNAMap 2.0: genomic maps of microRNAs in metazoan genomes. PMID:18029362
miRGator: an integrated system for functional annotation of microRNAs. PMID:17942429
MicroRNA-29 family reverts aberrant methylation in lung cancer by targeting DNA methyltransferases 3A and 3B. PMID:17890317
MicroRNA regulation of cyclooxygenase-2 during embryo implantation. PMID:17848513
The diploid genome sequence of an individual human. PMID:17803354
Vir-Mir db: prediction of viral microRNA candidate hairpins. PMID:17702763 -
miRGen 2.0: a database of microRNA genomic information and regulation
PubMed citations: 68.
68 articles citing: miRGen 2.0: a database of microRNA genomic information and regulation
MicroRNA-16 Restores Sensitivity to Tyrosine Kinase Inhibitors and Outperforms MEK Inhibitors in KRAS-Mutated Non-Small Cell Lung Cancer. PMID:34948154
Epigenetic Regulation of MicroRNA Clusters and Families during Tumor Development. PMID:33809566
HAHmiR.DB: a server platform for high-altitude human miRNA-gene coregulatory networks and associated regulatory circuits. PMID:33259604
Non-coding RNAs in neuropathic pain. PMID:32587755
MyomirDB: A unified database and server platform for muscle atrophy myomiRs, coregulatory networks and regulons. PMID:32451429
LeukmiR: a database for miRNAs and their targets in acute lymphoblastic leukemia. PMID:32128558
Dysregulation of NEUROG2 plays a key role in focal cortical dysplasia. PMID:29461643
miRNA Editing: New Insights into the Fast Control of Gene Expression in Health and Disease. PMID:29460265
Transcribed ultraconserved region 339 promotes carcinogenesis by modulating tumor suppressor microRNAs. PMID:29180617
MicroRNAs as predictors for CNS relapse of systemic diffuse large B-cell lymphoma. PMID:29156774
Combining Supervised and Unsupervised Learning for Improved miRNA Target Prediction. PMID:28715336
Methods of MicroRNA Promoter Prediction and Transcription Factor Mediated Regulatory Network. PMID:28656148
Analysis of miRNA, mRNA, and TF interactions through network-based methods. PMID:28194173
Wnt-signalling pathways and microRNAs network in carcinogenesis: experimental and bioinformatics approaches. PMID:27590724
Web-based tools for microRNAs involved in human cancer. PMID:27284356
Identification and Analysis of the Porcine MicroRNA in Porcine Cytomegalovirus-Infected Macrophages Using Deep Sequencing. PMID:26943793
Comprehensive Expression Profiling and Functional Network Analysis of p53-Regulated MicroRNAs in HepG2 Cells Treated with Doxorubicin. PMID:26886852
MicroRNA variants as genetic determinants of bone mass. PMID:26723575
DIANA-miRGen v3.0: accurate characterization of microRNA promoters and their regulators. PMID:26586797
microRNAs as pharmacogenomic biomarkers for drug efficacy and drug safety assessment. PMID:26501795
Functional and therapeutic significance of protein kinase D enzymes in invasive breast cancer. PMID:26253275
Growth of glioblastoma is inhibited by miR-133-mediated EGFR suppression. PMID:26138587
Impairment of growth of gastric carcinoma by miR-133-mediated Her-2 inhibition. PMID:26076812
Temporal regulation of HIF-1 and NF-κB in hypoxic hepatocarcinoma cells. PMID:25823824
MiR-429 inhibits oral squamous cell carcinoma growth by targeting ZEB1. PMID:25640197
The hypoxia-inducible miR-429 regulates hypoxia-inducible factor-1α expression in human endothelial cells through a negative feedback loop. PMID:25550463
Systematic exploration of autonomous modules in noisy microRNA-target networks for testing the generality of the ceRNA hypothesis. PMID:25539629
VIRmiRNA: a comprehensive resource for experimentally validated viral miRNAs and their targets. PMID:25380780
Genome-wide survey of tissue-specific microRNA and transcription factor regulatory networks in 12 tissues. PMID:24889152
Unraveling the hidden heterogeneities of breast cancer based on functional miRNA cluster. PMID:24498150
OncomiRdbB: a comprehensive database of microRNAs and their targets in breast cancer. PMID:24428888
Discovery and visualization of miRNA-mRNA functional modules within integrated data using bicluster analysis. PMID:24357407
A systems' biology approach to study microRNA-mediated gene regulatory networks. PMID:24350286
miRTarBase update 2014: an information resource for experimentally validated miRNA-target interactions. PMID:24304892
Reconstruction and analysis of transcription factor-miRNA co-regulatory feed-forward loops in human cancers using filter-wrapper feature selection. PMID:24205155
targetHub: a programmable interface for miRNA-gene interactions. PMID:24013925
MicroRNA expression changes during interferon-beta treatment in the peripheral blood of multiple sclerosis patients. PMID:23921681
A new algorithm for integrated analysis of miRNA-mRNA interactions based on individual classification reveals insights into bladder cancer. PMID:23717626
The role of SIRT6 protein in aging and reprogramming of human induced pluripotent stem cells. PMID:23653361
Interplay between heme oxygenase-1 and miR-378 affects non-small cell lung carcinoma growth, vascularization, and metastasis. PMID:23617628
Structure and dynamics of molecular networks: a novel paradigm of drug discovery: a comprehensive review. PMID:23384594
Differential combinatorial regulatory network analysis related to venous metastasis of hepatocellular carcinoma. PMID:23282077
Preferential regulation of stably expressed genes in the human genome suggests a widespread expression buffering role of microRNAs. PMID:23281599
miRT: a database of validated transcription start sites of human microRNAs. PMID:23200141
Deciphering the transcriptional regulation of microRNA genes in humans with ACTLocater. PMID:22941648
Characterization of microRNA expression profiles in normal and osteoarthritic human chondrocytes. PMID:22883423
Computational analysis of target hub gene repression regulated by multiple and cooperative miRNAs. PMID:22798498
Genome-wide search for miRNA-target interactions in Arabidopsis thaliana with an integrated approach. PMID:22759612
Mutations and binding sites of human transcription factors. PMID:22670148
MAGIA²: from miRNA and genes expression data integrative analysis to microRNA-transcription factor mixed regulatory circuits (2012 update). PMID:22618880
Integration of MicroRNA databases to study MicroRNAs associated with multiple sclerosis. PMID:22549745
A systems biology approach to characterize the regulatory networks leading to trabectedin resistance in an in vitro model of myxoid liposarcoma. PMID:22523595
Next generation sequencing for profiling expression of miRNAs: technical progress and applications in drug development. PMID:22457835
MicroRNA dysregulation in cancer: diagnostics, monitoring and therapeutics. A comprehensive review. PMID:22351564
Network analysis of microRNAs and their regulation in human ovarian cancer. PMID:22050994
The unfolded protein response (UPR)-activated transcription factor X-box-binding protein 1 (XBP1) induces microRNA-346 expression that targets the human antigen peptide transporter 1 (TAP1) mRNA and governs immune regulatory genes. PMID:22002058
A comprehensive expression profile of microRNAs in porcine pituitary. PMID:21969866
MIRTFnet: analysis of miRNA regulated transcription factors. PMID:21857930
miRTar: an integrated system for identifying miRNA-target interactions in human. PMID:21791068
Shielding the messenger (RNA): microRNA-based anticancer therapies. PMID:21514318
MiR-21 plays an important role in radiation induced carcinogenesis in BALB/c mice by directly targeting the tumor suppressor gene Big-h3. PMID:21494432
MIR@NT@N: a framework integrating transcription factors, microRNAs and their targets to identify sub-network motifs in a meta-regulation network model. PMID:21375730
dPORE-miRNA: polymorphic regulation of microRNA genes. PMID:21326606
miRTarBase: a database curates experimentally validated microRNA-target interactions. PMID:21071411
TAM: a method for enrichment and depletion analysis of a microRNA category in a list of microRNAs. PMID:20696049
Important aspects of Toll-like receptors, ligands and their signaling pathways. PMID:20593217
miRSel: automated extraction of associations between microRNAs and genes from the biomedical literature. PMID:20233441
Integrating the multiple dimensions of genomic and epigenomic landscapes of cancer. PMID:20108112 -
DIANA-miRGen v3.0: accurate characterization of microRNA promoters and their regulators
PubMed citations: 23.
23 articles citing: DIANA-miRGen v3.0: accurate characterization of microRNA promoters and their regulators
TRmir: A Comprehensive Resource for Human Transcriptional Regulatory Information of MiRNAs. PMID:35186035
ZEB1 promotes pathogenic Th1 and Th17 cell differentiation in multiple sclerosis. PMID:34433042
Integrative analysis of genomic and epigenomic data reveal underlying superenhancer-mediated microRNA regulatory network for human bone mineral density. PMID:34230965
Angiotensin II-induced muscle atrophy via PPARγ suppression is mediated by miR-29b. PMID:33614226
DIANA-miRGen v4: indexing promoters and regulators for more than 1500 microRNAs. PMID:33245765
The combination of circRNA-UMAD1 and Galectin-3 in peripheral circulation is a co-biomarker for predicting lymph node metastasis of thyroid carcinoma. PMID:33042427
Computational annotation of miRNA transcription start sites. PMID:32003428
miRTarBase 2020: updates to the experimentally validated microRNA-target interaction database. PMID:31647101
Amplified Host Defense by Toll-Like Receptor-Mediated Downregulation of the Glucocorticoid-Induced Leucine Zipper (GILZ) in Macrophages. PMID:30723476
TransmiR v2.0: an updated transcription factor-microRNA regulation database. PMID:30371815
Integrated Characterization of MicroRNA and mRNA Transcriptome in Papillary Thyroid Carcinoma. PMID:29713312
Roles of NF-κB Signaling in the Regulation of miRNAs Impacting on Inflammation in Cancer. PMID:29601548
mirTrans: a resource of transcriptional regulation on microRNAs for human cell lines. PMID:29077896
An integrated expression atlas of miRNAs and their promoters in human and mouse. PMID:28829439
JMJD1C Ensures Mouse Embryonic Stem Cell Self-Renewal and Somatic Cell Reprogramming through Controlling MicroRNA Expression. PMID:28826851
Methods of MicroRNA Promoter Prediction and Transcription Factor Mediated Regulatory Network. PMID:28656148
BioM2MetDisease: a manually curated database for associations between microRNAs, metabolites, small molecules and metabolic diseases. PMID:28605773
Systems biology study of transcriptional and post-transcriptional co-regulatory network sheds light on key regulators involved in important biological processes in Citrus sinensis. PMID:28461722
MYCbase: a database of functional sites and biochemical properties of Myc in both normal and cancer cells. PMID:28454513
The 24th annual Nucleic Acids Research database issue: a look back and upcoming changes. PMID:28053160
DIANA-mirExTra v2.0: Uncovering microRNAs and transcription factors with crucial roles in NGS expression data. PMID:27207881
Infinity: An In-Silico Tool for Genome-Wide Prediction of Specific DNA Matrices in miRNA Genomic Loci. PMID:27082112
Systems psychopharmacology: A network approach to developing novel therapies. PMID:27014599
Tags:
gene structure gene expression
Need help integrating and/or managing biomedical data?