Other names: bioplex_2.0
A repository of protein interaction data from mass spectrometry experiments.
protein interaction proteomics proteomics experiment data integration and warehousing
Repository and statistical tools for directly determined PTM crosstalk based on long peptides measured by mass spectrometry. Focus on histone proteins.
An Open-source Platform for Hosting, Visualizing and Analyzing Protein Interaction Data.
This module identifies the minimum information required to report the use of protein and peptide identification and characterisation software to analyse the data produced by mass spectrometry experime ...
MassIVE is a community resource developed by the NIH-funded Center for Computational Mass Spectrometry to promote the global, free exchange of mass spectrometry data. MassIVE datasets can be assigned ...
Protein Interaction Network Analysis (PINA) platform is an integrated platform for protein interaction network construction, filtering, analysis, visualization, and management. It integrates protein-p ...
DroID, the Drosophila Interactions Database, assembles gene and protein interaction data from a variety of sources into one easily accessible, comprehensive database. The database includes published a ...
Unimod is a community-supported, comprehensive database of protein modifications for mass spectrometry applications. The aim is to provide accurate and verifiable values, derived from elemental compos ...
The Biological General Repository for Interaction Datasets (BioGRID) is a curated biological database of protein-protein interactions, genetic interactions, chemical interactions, and post-translation ...
The Database contains all publicly available HMS LINCS datasets and information for each dataset about experimental reagents (small molecule perturbagens, cells, antibodies, and proteins) and experime ...
Arabidopsis thaliana Protein Interactome Database
HIPPIE integrates human protein-protein interactions from several manually curated source databases. It provides a web tool to query the interaction data, generate highly reliable, context-specific in ...
Repository for clinicians and scientists working in the rare disorder community. It enables secure sharing of case records by clinicians and rare disease scientists and helps the user to find addition ...
A community resource of quantitative mass spectrometry-based proteomics datasets. MassIVE.quant is an extension of the Mass Spectrometry Interactive Virtual Environment (MassIVE) to provide the oppor ...
This module identifies the minimum information required to report the use of a mass spectrometer in a proteomics experiment, sufficient to support both the effective (re-)interpretation and (re-) asse ...
MINT focuses on experimentally verified protein-protein interactions mined from the scientific literature by expert curators. This resource uses the IntAct database framework to help reduce the effort ...
A statistical method for predicting the effects of mutations.
Death Domain Database is a manually curated database of protein-protein interactions for Death Domain Superfamily.
PaIntDB (Pseudomonas aeruginosa Interactions Database) is a tool for network-based omics integration and visualization using protein–protein interactions in Pseudomonas aeruginosa. PaIntDB contains mo ...
an annotated database of protein associations. Tabloid Proteome is a database of protein association network generated using publically available mass spectrometry based experiments in PRIDE.These as ...
Panorama Public is a data repository for sharing and disseminating results from analyzing mass spectrometry data with the Skyline software. Skyline supports targeted analysis of proteomics or metabolo ...