BioImage Archive
Names
More detailed information about this field from each metasource.
BioImage Archive
metasource: Fairsharing.org
version: FAIRsharing.org: BioImage Archive; BioImage Archive; DOI: https://doi.org/10.25504/FAIRsharing.x38D2k; Last edited: Jan. 25, 2021, 4:27 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
metasource: re3data.org
version: re3data.org: BioImage Archive; editing status 2022-08-13; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJN99 last accessed: 2022-11-04
BIA
metasource: re3data.org
version: re3data.org: BioImage Archive; editing status 2022-08-13; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJN99 last accessed: 2022-11-04
Names
More detailed information about this field from each metasource.
BioImage Archive
metasource: Fairsharing.orgversion: FAIRsharing.org: BioImage Archive; BioImage Archive; DOI: https://doi.org/10.25504/FAIRsharing.x38D2k; Last edited: Jan. 25, 2021, 4:27 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
metasource: re3data.org
version: re3data.org: BioImage Archive; editing status 2022-08-13; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJN99 last accessed: 2022-11-04
BIA
metasource: re3data.orgversion: re3data.org: BioImage Archive; editing status 2022-08-13; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJN99 last accessed: 2022-11-04
Names
More detailed information about this field from each metasource.
BioImage Archive
metasource: Fairsharing.orgversion: FAIRsharing.org: BioImage Archive; BioImage Archive; DOI: https://doi.org/10.25504/FAIRsharing.x38D2k; Last edited: Jan. 25, 2021, 4:27 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
metasource: re3data.org
version: re3data.org: BioImage Archive; editing status 2022-08-13; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJN99 last accessed: 2022-11-04
BIA
metasource: re3data.orgversion: re3data.org: BioImage Archive; editing status 2022-08-13; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJN99 last accessed: 2022-11-04
The BioImage Archive stores and distributes biological images that are useful to life-science researchers. Its development will provide data archiving services to the broader bioimaging database community. This includes added-value bioimaging data resources such as EMPIAR, Cell-IDR and Tissue-IDR.
Description
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The BioImage Archive stores and distributes biological images that are useful to life-science researchers. Its development will provide data archiving services to the broader bioimaging database community. This includes added-value bioimaging data resources such as EMPIAR, Cell-IDR and Tissue-IDR.
metasource: Fairsharing.orgversion: FAIRsharing.org: BioImage Archive; BioImage Archive; DOI: https://doi.org/10.25504/FAIRsharing.x38D2k; Last edited: Jan. 25, 2021, 4:27 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
The BioImage Archive stores and distributes life sciences imaging datasets. It supports deposition of biological imaging data associated with publications for the whole research community, as well as reference imaging datasets. All data deposited to the BioImage Archive is made openly accessible to the scientific community.
metasource: re3data.orgversion: re3data.org: BioImage Archive; editing status 2022-08-13; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJN99 last accessed: 2022-11-04
Webpage:
https://www.ebi.ac.uk/bioimage-archive/Webpage
More detailed information about this field from each metasource.
https://www.ebi.ac.uk/bioimage-archive/
metasource: Fairsharing.orgversion: FAIRsharing.org: BioImage Archive; BioImage Archive; DOI: https://doi.org/10.25504/FAIRsharing.x38D2k; Last edited: Jan. 25, 2021, 4:27 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
https://www.ebi.ac.uk/bioimage-archive
metasource: re3data.orgversion: re3data.org: BioImage Archive; editing status 2022-08-13; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJN99 last accessed: 2022-11-04
Licence:
Name: EMBL-EBI Terms of UseLicence name
More detailed information about this field from each metasource.
EMBL-EBI Terms of Use
metasource: Fairsharing.orgversion: FAIRsharing.org: BioImage Archive; BioImage Archive; DOI: https://doi.org/10.25504/FAIRsharing.x38D2k; Last edited: Jan. 25, 2021, 4:27 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
CC
metasource: re3data.orgversion: re3data.org: BioImage Archive; editing status 2022-08-13; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJN99 last accessed: 2022-11-04
Licence URL
More detailed information about this field from each metasource.
http://www.ebi.ac.uk/about/terms-of-use
metasource: Fairsharing.orgversion: FAIRsharing.org: BioImage Archive; BioImage Archive; DOI: https://doi.org/10.25504/FAIRsharing.x38D2k; Last edited: Jan. 25, 2021, 4:27 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
https://creativecommons.org/publicdomain/zero/1.0/
metasource: re3data.orgversion: re3data.org: BioImage Archive; editing status 2022-08-13; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJN99 last accessed: 2022-11-04
Publications:
Publications
More detailed information about this field from each metasource.
A call for public archives for biological image data
PMID: 30377375
metasource: Fairsharing.org
version: FAIRsharing.org: BioImage Archive; BioImage Archive; DOI: https://doi.org/10.25504/FAIRsharing.x38D2k; Last edited: Jan. 25, 2021, 4:27 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
Publications
More detailed information about this field from each metasource.
A call for public archives for biological image data
PMID: 30377375
metasource: Fairsharing.org
version: FAIRsharing.org: BioImage Archive; BioImage Archive; DOI: https://doi.org/10.25504/FAIRsharing.x38D2k; Last edited: Jan. 25, 2021, 4:27 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
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A call for public archives for biological image data
PubMed citations: 35.
35 articles citing: A call for public archives for biological image data
User-Accessible Machine Learning Approaches for Cell Segmentation and Analysis in Tissue. PMID:35360226
OpenCell: Endogenous tagging for the cartography of human cellular organization. PMID:35271311
Review of bio-optical imaging systems with a high space-bandwidth product. PMID:35178513
Morphological heterogeneity description enabled early and parallel non-invasive prediction of T-cell proliferation inhibitory potency and growth rate for facilitating donor selection of human mesenchymal stem cells. PMID:35093181
Label-free visual proteomics: Coupling MS- and EM-based approaches in structural biology. PMID:35063097
High-Resolution Episcopic Microscopy (HREM) in Multimodal Imaging Approaches. PMID:34944735
Micro-Meta App: an interactive tool for collecting microscopy metadata based on community specifications. PMID:34862503
Towards community-driven metadata standards for light microscopy: tiered specifications extending the OME model. PMID:34862501
OME-NGFF: a next-generation file format for expanding bioimaging data-access strategies. PMID:34845388
Tutorial: methods for three-dimensional visualization of archival tissue material. PMID:34716449
Nanometre-scale imaging and AI reveal the interior of whole cells. PMID:34697481
Reproducibility standards for machine learning in the life sciences. PMID:34462593
Machine Learning and Artificial Intelligence for the Prediction of Host-Pathogen Interactions: A Viral Case. PMID:34456575
BRCA2 binding through a cryptic repeated motif to HSF2BP oligomers does not impact meiotic recombination. PMID:34326328
Best practices and tools for reporting reproducible fluorescence microscopy methods. PMID:34099930
REMBI: Recommended Metadata for Biological Images-enabling reuse of microscopy data in biology. PMID:34021280
Holistic description of new deep sea megafauna (Cephalopoda: Cirrata) using a minimally invasive approach. PMID:33888110
Data science in cell imaging. PMID:33795377
Creating clear and informative image-based figures for scientific publications. PMID:33788834
Effective image visualization for publications - a workflow using open access tools and concepts. PMID:33708381
Data-deposition protocols for correlative soft X-ray tomography and super-resolution structured illumination microscopy applications. PMID:33490973
Reproducible image handling and analysis. PMID:33480052
Image-based profiling for drug discovery: due for a machine-learning upgrade? PMID:33353986
Pancreatlas: Applying an Adaptable Framework to Map the Human Pancreas in Health and Disease. PMID:33294866
From ArrayExpress to BioStudies. PMID:33211879
BIAFLOWS: A Collaborative Framework to Reproducibly Deploy and Benchmark Bioimage Analysis Workflows. PMID:33205108
Imaging methods are vastly underreported in biomedical research. PMID:32780019
Community standards for open cell migration data. PMID:32396199
Effect of Vectashield-induced fluorescence quenching on conventional and super-resolution microscopy. PMID:32296095
Tutorial: guidance for quantitative confocal microscopy. PMID:32235926
The Integrated Resource for Reproducibility in Macromolecular Crystallography: Experiences of the first four years. PMID:31768399
The European Bioinformatics Institute in 2020: building a global infrastructure of interconnected data resources for the life sciences. PMID:31701143
Key challenges facing data-driven multicellular systems biology. PMID:31648301
Securing the future of research computing in the biosciences. PMID:31095554
The European Bioinformatics Institute in 2018: tools, infrastructure and training. PMID:30445657
Tags:
Tags
More detailed information about this field from each metasource.
biological imaging
metasource: Fairsharing.org
version: FAIRsharing.org: BioImage Archive; BioImage Archive; DOI: https://doi.org/10.25504/FAIRsharing.x38D2k; Last edited: Jan. 25, 2021, 4:27 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
cell
metasource: Fairsharing.org
version: FAIRsharing.org: BioImage Archive; BioImage Archive; DOI: https://doi.org/10.25504/FAIRsharing.x38D2k; Last edited: Jan. 25, 2021, 4:27 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
image
metasource: Fairsharing.org
version: FAIRsharing.org: BioImage Archive; BioImage Archive; DOI: https://doi.org/10.25504/FAIRsharing.x38D2k; Last edited: Jan. 25, 2021, 4:27 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
tissue
metasource: Fairsharing.org
version: FAIRsharing.org: BioImage Archive; BioImage Archive; DOI: https://doi.org/10.25504/FAIRsharing.x38D2k; Last edited: Jan. 25, 2021, 4:27 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
bioimaging
metasource: re3data.org
version: re3data.org: BioImage Archive; editing status 2022-08-13; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJN99 last accessed: 2022-11-04
high-content screening
metasource: re3data.org
version: re3data.org: BioImage Archive; editing status 2022-08-13; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJN99 last accessed: 2022-11-04
microscopy
metasource: re3data.org
version: re3data.org: BioImage Archive; editing status 2022-08-13; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJN99 last accessed: 2022-11-04
Tags
More detailed information about this field from each metasource.
biological imaging
metasource: Fairsharing.orgversion: FAIRsharing.org: BioImage Archive; BioImage Archive; DOI: https://doi.org/10.25504/FAIRsharing.x38D2k; Last edited: Jan. 25, 2021, 4:27 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
cell
metasource: Fairsharing.orgversion: FAIRsharing.org: BioImage Archive; BioImage Archive; DOI: https://doi.org/10.25504/FAIRsharing.x38D2k; Last edited: Jan. 25, 2021, 4:27 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
image
metasource: Fairsharing.orgversion: FAIRsharing.org: BioImage Archive; BioImage Archive; DOI: https://doi.org/10.25504/FAIRsharing.x38D2k; Last edited: Jan. 25, 2021, 4:27 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
tissue
metasource: Fairsharing.orgversion: FAIRsharing.org: BioImage Archive; BioImage Archive; DOI: https://doi.org/10.25504/FAIRsharing.x38D2k; Last edited: Jan. 25, 2021, 4:27 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
bioimaging
metasource: re3data.orgversion: re3data.org: BioImage Archive; editing status 2022-08-13; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJN99 last accessed: 2022-11-04
high-content screening
metasource: re3data.orgversion: re3data.org: BioImage Archive; editing status 2022-08-13; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJN99 last accessed: 2022-11-04
microscopy
metasource: re3data.orgversion: re3data.org: BioImage Archive; editing status 2022-08-13; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJN99 last accessed: 2022-11-04
biological imaging cell tissue bioimaging high-content screening microscopy
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