BIPS
The web server where you can predict putative interactions between proteins based on homologs found in Protein-Protein interaction databases. It relies on data integrated in BIANA. You just need to insert your sequences of interest or list of protein identifiers, and the tool will infer interactions based on homology. Predicted partners can be restricted to proteins added in your list or to the complete BIANA database.
Description
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The web server where you can predict putative interactions between proteins based on homologs found in Protein-Protein interaction databases. It relies on data integrated in BIANA. You just need to insert your sequences of interest or list of protein identifiers, and the tool will infer interactions based on homology. Predicted partners can be restricted to proteins added in your list or to the complete BIANA database.
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:32:32.857216
Webpage:
http://sbi.imim.es/BIPS.phpWebpage
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Publications:
Publications
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BIPS: BIANA Interolog Prediction Server. A tool for protein-protein interaction inference
PMID: 22689642
metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:32.857216
Publications
More detailed information about this field from each metasource.
BIPS: BIANA Interolog Prediction Server. A tool for protein-protein interaction inference
PMID: 22689642
metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:32.857216
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BIPS: BIANA Interolog Prediction Server. A tool for protein-protein interaction inference
PubMed citations: 16.
16 articles citing: BIPS: BIANA Interolog Prediction Server. A tool for protein-protein interaction inference
Comparative Host-Pathogen Interaction Analyses of SARS-CoV2 and Aspergillus fumigatus, and Pathogenesis of COVID-19-Associated Aspergillosis. PMID:34738157
Getting to know each other: PPIMem, a novel approach for predicting transmembrane protein-protein complexes. PMID:34630938
BiomeNet: a database for construction and analysis of functional interaction networks for any species with a sequenced genome. PMID:31599923
Identification of genes underlying phenotypic plasticity of wing size via insulin signaling pathway by network-based analysis in Sogatella furcifera. PMID:31113376
IMMAN: an R/Bioconductor package for Interolog protein network reconstruction, mapping and mining analysis. PMID:30755155
Inferring pathogen-host interactions between Leptospira interrogans and Homo sapiens using network theory. PMID:30723266
Exploration of Survival Traits, Probiotic Determinants, Host Interactions, and Functional Evolution of Bifidobacterial Genomes Using Comparative Genomics. PMID:30275399
PlanNET: homology-based predicted interactome for multiple planarian transcriptomes. PMID:29186384
Using structural knowledge in the protein data bank to inform the search for potential host-microbe protein interactions in sequence space: application to Mycobacterium tuberculosis. PMID:28376709
Protein-Protein Interactions: Gene Acronym Redundancies and Current Limitations Precluding Automated Data Integration. PMID:28250396
In Silico Designing and Analysis of Inhibitors against Target Protein Identified through Host-Pathogen Protein Interactions in Malaria. PMID:27057354
PPCM: Combing Multiple Classifiers to Improve Protein-Protein Interaction Prediction. PMID:26539460
Prediction of host - pathogen protein interactions between Mycobacterium tuberculosis and Homo sapiens using sequence motifs. PMID:25887594
Homology-based prediction of interactions between proteins using Averaged One-Dependence Estimators. PMID:24953126
Complementing the Eukaryotic Protein Interactome. PMID:23825550
JiffyNet: a web-based instant protein network modeler for newly sequenced species. PMID:23685435
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