AmoebaDB
Names
More detailed information about this field from each metasource.
AmoebaDB
metasource: Fairsharing.org
version: FAIRsharing.org: AmoebaDB; AmoebaDB; DOI: https://doi.org/10.25504/FAIRsharing.swbypy; Last edited: April 26, 2021, 3:39 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
metasource: re3data.org
version: re3data.org: AmoebaDB; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PX9Q last accessed: 2022-11-04
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:19.758994
amoebadb
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:19.758994
Names
More detailed information about this field from each metasource.
AmoebaDB
metasource: Fairsharing.orgversion: FAIRsharing.org: AmoebaDB; AmoebaDB; DOI: https://doi.org/10.25504/FAIRsharing.swbypy; Last edited: April 26, 2021, 3:39 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
metasource: re3data.org
version: re3data.org: AmoebaDB; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PX9Q last accessed: 2022-11-04
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:19.758994
amoebadb
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:33:19.758994
Names
More detailed information about this field from each metasource.
AmoebaDB
metasource: Fairsharing.orgversion: FAIRsharing.org: AmoebaDB; AmoebaDB; DOI: https://doi.org/10.25504/FAIRsharing.swbypy; Last edited: April 26, 2021, 3:39 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
metasource: re3data.org
version: re3data.org: AmoebaDB; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PX9Q last accessed: 2022-11-04
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:19.758994
amoebadb
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:33:19.758994
AmoebaDB belongs to the EuPathDB family of databases and is an integrated genomic and functional genomic database for Entamoeba and Acanthamoeba parasites. In its first released, AmoebaDB contained the genomes of three Entamoeba species. AmoebaDB integrates whole genome sequence and annotation and will rapidly expand to include experimental data and environmental isolate sequences provided by community researchers . The database includes supplemental bioinformatics analyses and a web interface for data-mining.
Description
More detailed information about this field from each metasource.
AmoebaDB belongs to the EuPathDB family of databases and is an integrated genomic and functional genomic database for Entamoeba and Acanthamoeba parasites. In its first released, AmoebaDB contained the genomes of three Entamoeba species. AmoebaDB integrates whole genome sequence and annotation and will rapidly expand to include experimental data and environmental isolate sequences provided by community researchers . The database includes supplemental bioinformatics analyses and a web interface for data-mining.
metasource: Fairsharing.orgversion: FAIRsharing.org: AmoebaDB; AmoebaDB; DOI: https://doi.org/10.25504/FAIRsharing.swbypy; Last edited: April 26, 2021, 3:39 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
Functional Genomic Resource for Amoebazoa
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
AmoebaDB belongs to the EuPathDB family of databases and is an integrated genomic and functional genomic database for Entamoeba and Acanthamoeba parasites. In its first iteration (released in early 2010), AmoebaDB contains the genomes of three Entamoeba species (see below). AmoebaDB integrates whole genome sequence and annotation and will rapidly expand to include experimental data and environmental isolate sequences provided by community researchers . The database includes supplemental bioinformatics analyses and a web interface for data-mining.
metasource: re3data.orgversion: re3data.org: AmoebaDB; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PX9Q last accessed: 2022-11-04
It is a new functional genomic databases serving the amoebozoa research communities. It contains the genomes of three Entamoeba species (E. dispar, E. invadens and E. histolityca) and microarray expression data for E. histolytica. Importantly it utilizes the graphical strategy builder that affords a database user the ability to ask complex multi-data-type questions with relative ease and versatility.
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:33:19.758994
Webpage:
http://amoebadb.orgWebpage
More detailed information about this field from each metasource.
http://amoebadb.org
metasource: Fairsharing.orgversion: FAIRsharing.org: AmoebaDB; AmoebaDB; DOI: https://doi.org/10.25504/FAIRsharing.swbypy; Last edited: April 26, 2021, 3:39 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
http://amoebadb.org/amoeba/
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
https://amoebadb.org/amoeba/app
metasource: re3data.orgversion: re3data.org: AmoebaDB; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PX9Q last accessed: 2022-11-04
http://AmoebaDB.org
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:33:19.758994
Licence:
Name: AmoebaDB Attribution requiredLicence name
More detailed information about this field from each metasource.
AmoebaDB Attribution required
metasource: Fairsharing.orgversion: FAIRsharing.org: AmoebaDB; AmoebaDB; DOI: https://doi.org/10.25504/FAIRsharing.swbypy; Last edited: April 26, 2021, 3:39 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
Public Domain
metasource: re3data.orgversion: re3data.org: AmoebaDB; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PX9Q last accessed: 2022-11-04
Licence URL
More detailed information about this field from each metasource.
https://amoebadb.org/amoeba/app/static-content/about.html#about_citing
metasource: Fairsharing.orgversion: FAIRsharing.org: AmoebaDB; AmoebaDB; DOI: https://doi.org/10.25504/FAIRsharing.swbypy; Last edited: April 26, 2021, 3:39 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
http://amoebadb.org/amoeba//showXmlDataContent.do?name=XmlQuestions.About#use
metasource: re3data.orgversion: re3data.org: AmoebaDB; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PX9Q last accessed: 2022-11-04
Publications:
Publications
More detailed information about this field from each metasource.
EuPathDB: a portal to eukaryotic pathogen databases
PMID: 19914931
metasource: Fairsharing.org
version: FAIRsharing.org: AmoebaDB; AmoebaDB; DOI: https://doi.org/10.25504/FAIRsharing.swbypy; Last edited: April 26, 2021, 3:39 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
AmoebaDB and MicrosporidiaDB: functional genomic resources for Amoebozoa and Microsporidia species
PMID: 20974635
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:19.758994
http://nar.oxfordjournals.org/content/39/suppl_1/D612
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Publications
More detailed information about this field from each metasource.
EuPathDB: a portal to eukaryotic pathogen databases
PMID: 19914931
metasource: Fairsharing.org
version: FAIRsharing.org: AmoebaDB; AmoebaDB; DOI: https://doi.org/10.25504/FAIRsharing.swbypy; Last edited: April 26, 2021, 3:39 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
AmoebaDB and MicrosporidiaDB: functional genomic resources for Amoebozoa and Microsporidia species
PMID: 20974635
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:19.758994
http://nar.oxfordjournals.org/content/39/suppl_1/D612
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
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EuPathDB: a portal to eukaryotic pathogen databases
PubMed citations: 81.
81 articles citing: EuPathDB: a portal to eukaryotic pathogen databases
Paving the Way: Contributions of Big Data to Apicomplexan and Kinetoplastid Research. PMID:35734575
Compilation of parasitic immunogenic proteins from 30 years of published research using machine learning and natural language processing. PMID:35725870
Predicting Protein Therapeutic Candidates for Bovine Babesiosis Using Secondary Structure Properties and Machine Learning. PMID:34367264
Metagenomics: a path to understanding the gut microbiome. PMID:34259891
Applying Machine Learning to Predict the Exportome of Bovine and Canine Babesia Species That Cause Babesiosis. PMID:34071992
Babesia Bovis Ligand-Receptor Interaction: AMA-1 Contains Small Regions Governing Bovine Erythrocyte Binding. PMID:33450807
A Comprehensive Subcellular Atlas of the Toxoplasma Proteome via hyperLOPIT Provides Spatial Context for Protein Functions. PMID:33053376
Novel Babesia bovis exported proteins that modify properties of infected red blood cells. PMID:33017449
Plasmodium Condensin Core Subunits SMC2/SMC4 Mediate Atypical Mitosis and Are Essential for Parasite Proliferation and Transmission. PMID:32049018
ApicoTFdb: the comprehensive web repository of apicomplexan transcription factors and transcription-associated co-factors. PMID:31529106
ChlamBase: a curated model organism database for the Chlamydia research community. PMID:30985891
Plasmodium palmitoylation machinery engineered in E. coli for high-throughput screening of palmitoyl acyl-transferase inhibitors. PMID:30761251
Genetic Diversity and Gene Family Expansions in Members of the Genus Entamoeba. PMID:30668670
Babesia bovis RON2 contains conserved B-cell epitopes that induce an invasion-blocking humoral immune response in immunized cattle. PMID:30390674
A Gene-Based Positive Selection Detection Approach to Identify Vaccine Candidates Using Toxoplasma gondii as a Test Case Protozoan Pathogen. PMID:30177953
Lipid analysis of Eimeria sporozoites reveals exclusive phospholipids, a phylogenetic mosaic of endogenous synthesis, and a host-independent lifestyle. PMID:29844921
Characterization of the Theileria parva sporozoite proteome. PMID:29258832
Extreme genome diversity in the hyper-prevalent parasitic eukaryote Blastocystis. PMID:28892507
A novel lipoate attachment enzyme is shared by Plasmodium and Chlamydia species. PMID:28836704
Functional Profiling of a Plasmodium Genome Reveals an Abundance of Essential Genes. PMID:28708996
Genome-wide analysis of gene expression and protein secretion of Babesia canis during virulent infection identifies potential pathogenicity factors. PMID:28611446
Origin and Evolutionary Alteration of the Mitochondrial Import System in Eukaryotic Lineages. PMID:28369657
Protein Bioinformatics Databases and Resources. PMID:28150231
Mitochondrial Genome Sequences and Structures Aid in the Resolution of Piroplasmida phylogeny. PMID:27832128
A review on host-pathogen interactions: classification and prediction. PMID:27470504
Leishmania infantum Asparagine Synthetase A Is Dispensable for Parasites Survival and Infectivity. PMID:26771178
Leishmania donovani Encodes a Functional Selenocysteinyl-tRNA Synthase. PMID:26586914
The nucleosome landscape of Plasmodium falciparum reveals chromatin architecture and dynamics of regulatory sequences. PMID:26578577
Systems analysis of host-parasite interactions. PMID:26306749
Network-based gene prediction for Plasmodium falciparum malaria towards genetics-based drug discovery. PMID:26099491
Databases for Microbiologists. PMID:26013493
A novel Mitosomal β-barrel Outer Membrane Protein in Entamoeba. PMID:25711150
Automated training for algorithms that learn from genomic data. PMID:25695053
The Ordospora colligata genome: Evolution of extreme reduction in microsporidia and host-to-parasite horizontal gene transfer. PMID:25587016
Immunization with the Entamoeba histolytica surface metalloprotease EhMSP-1 protects hamsters from amebic liver abscess. PMID:25452550
Genome wide in silico analysis of Plasmodium falciparum phosphatome. PMID:25425018
The Pathogen-Host Interactions database (PHI-base): additions and future developments. PMID:25414340
The Eukaryotic Pathogen Databases: a functional genomic resource integrating data from human and veterinary parasites. PMID:25388105
A survey of innovation through duplication in the reduced genomes of twelve parasites. PMID:24919110
Cryptosporidium parvum has an active hypusine biosynthesis pathway. PMID:24893338
Identification and functional characterization of a novel bacterial type asparagine synthetase A: a tRNA synthetase paralog from Leishmania donovani. PMID:24610810
Selecting targets from eukaryotic parasites for structural genomics and drug discovery. PMID:24590708
Strategies to discover the structural components of cyst and oocyst walls. PMID:24096907
Identification of a family of four UDP-polypeptide N-acetylgalactosaminyl transferases in Cryptosporidium species. PMID:23954365
Identification and characterization of Cryptosporidium parvum Clec, a novel C-type lectin domain-containing mucin-like glycoprotein. PMID:23817613
Genomic distribution of SINEs in Entamoeba histolytica strains: implication for genotyping. PMID:23815468
Query enhancement through the practical application of ontology: the IEDB and OBI. PMID:23734660
The Enzyme Portal: a case study in applying user-centred design methods in bioinformatics. PMID:23514033
Drug repurposing screen reveals FDA-approved inhibitors of human HMG-CoA reductase and isoprenoid synthesis that block Cryptosporidium parvum growth. PMID:23380723
Global biogeography of highly diverse protistan communities in soil. PMID:23235291
Library of Apicomplexan Metabolic Pathways: a manually curated database for metabolic pathways of apicomplexan parasites. PMID:23193253
EuPathDB: the eukaryotic pathogen database. PMID:23175615
SchistoDB: an updated genome resource for the three key schistosomes of humans. PMID:23161692
Unusual domain architecture of aminoacyl tRNA synthetases and their paralogs from Leishmania major. PMID:23151081
Parasites, proteomes and systems: has Descartes' clock run out of time? PMID:22828391
Kinetic and phylogenetic analysis of plant polyamine uptake transporters. PMID:22711282
The immune epitope database: a historical retrospective of the first decade. PMID:22681406
The Ontology for Parasite Lifecycle (OPL): towards a consistent vocabulary of lifecycle stages in parasitic organisms. PMID:22621763
ApicoAP: the first computational model for identifying apicoplast-targeted proteins in multiple species of Apicomplexa. PMID:22574192
Toxoplasma on the brain: understanding host-pathogen interactions in chronic CNS infection. PMID:22545203
Control of Entamoeba histolytica adherence involves metallosurface protease 1, an M8 family surface metalloprotease with homology to leishmanolysin. PMID:22451519
SpiroESTdb: a transcriptome database and online tool for sparganum expressed sequences tags. PMID:22397686
A semantic problem solving environment for integrative parasite research: identification of intervention targets for Trypanosoma cruzi. PMID:22272365
VectorBase: improvements to a bioinformatics resource for invertebrate vector genomics. PMID:22135296
TDR Targets: a chemogenomics resource for neglected diseases. PMID:22116064
FungiDB: an integrated functional genomics database for fungi. PMID:22064857
Structural and evolutionary divergence of eukaryotic protein kinases in Apicomplexa. PMID:22047078
Schistosoma comparative genomics: integrating genome structure, parasite biology and anthelmintic discovery. PMID:22024648
Multiple independent fusions of glucose-6-phosphate dehydrogenase with enzymes in the pentose phosphate pathway. PMID:21829610
Host-Parasite interactions in Entamoeba histolytica and Entamoeba dispar: what have we learned from their genomes? PMID:21810102
The Strategies WDK: a graphical search interface and web development kit for functional genomics databases. PMID:21705364
Integrating diverse databases into an unified analysis framework: a Galaxy approach. PMID:21531983
A systems biological view of intracellular pathogens. PMID:21349090
A Sequential Model of Host Cell Killing and Phagocytosis by Entamoeba histolytica. PMID:21331284
David Roos. Interview by H. Craig Mak. PMID:21301442
Reverse vaccinology: developing vaccines in the era of genomics. PMID:21029963
AmoebaDB and MicrosporidiaDB: functional genomic resources for Amoebozoa and Microsporidia species. PMID:20974635
The antiretroviral lectin cyanovirin-N targets well-known and novel targets on the surface of Entamoeba histolytica trophozoites. PMID:20852023
Plant-type trehalose synthetic pathway in cryptosporidium and some other apicomplexans. PMID:20830297
Chromosome sequence maps of the Giardia lamblia assemblage A isolate WB. PMID:20739222
Genomic information infrastructure after the deluge. PMID:20670392 -
AmoebaDB and MicrosporidiaDB: functional genomic resources for Amoebozoa and Microsporidia species
PubMed citations: 62.
62 articles citing: AmoebaDB and MicrosporidiaDB: functional genomic resources for Amoebozoa and Microsporidia species
Genomic regions associated with resistance to soybean rust (Phakopsora pachyrhizi) under field conditions in soybean germplasm accessions from Japan, Indonesia and Vietnam. PMID:35902398
Self-activating G protein α subunits engage seven-transmembrane regulator of G protein signaling (RGS) proteins and a Rho guanine nucleotide exchange factor effector in the amoeba Naegleria fowleri. PMID:35738399
Characterization of the Largest Secretory Protein Family, Ricin B Lectin-like Protein, in Nosema bombycis: Insights into Microsporidian Adaptation to Host. PMID:35736035
Recent Advances with Fish Microsporidia. PMID:35544007
Mechanics of Microsporidian Polar Tube Firing. PMID:35544005
The Function and Structure of the Microsporidia Polar Tube. PMID:35544004
Comparative Genomics of Microsporidia. PMID:35543998
Impact of Genome Reduction in Microsporidia. PMID:35543997
The Rad9-Rad1-Hus1 DNA repair clamp is found in Microsporidia. PMID:35439302
Entamoeba histolytica EHD1 Is Involved in Mitosome-Endosome Contact. PMID:35404118
RNA Sequencing Reveals Widespread Transcription of Natural Antisense RNAs in Entamoeba Species. PMID:35208849
Protein Phosphatase PP2C Identification in Entamoeba spp. PMID:34697588
Complete genomes of the eukaryotic poultry parasite Histomonas meleagridis: linking sequence analysis with virulence / attenuation. PMID:34674644
Bioinformatic Analysis of Two TOR (Target of Rapamycin)-Like Proteins Encoded by Entamoeba histolytica Revealed Structural Similarities with Functional Homologs. PMID:34440318
Microsporidiosis in Humans. PMID:34190570
Phosphoglycerate kinase: structural aspects and functions, with special emphasis on the enzyme from Kinetoplastea. PMID:33234025
Near-chromosome level genome assembly reveals ploidy diversity and plasticity in the intestinal protozoan parasite Entamoeba histolytica. PMID:33225881
Genomic determinants for initiation and length of natural antisense transcripts in Entamoeba histolytica. PMID:33214622
Copper detoxification machinery of the brain-eating amoeba Naegleria fowleri involves copper-translocating ATPase and the antioxidant system. PMID:33096396
3-Dimensional organization and dynamics of the microsporidian polar tube invasion machinery. PMID:32946515
The role of the Acanthamoeba castellanii Sir2-like protein in the growth and encystation of Acanthamoeba. PMID:32698828
First Reports of Effects of Insulin, Human-like Insulin Receptors and Adapter Proteins in Acanthamoeba castellanii. PMID:32678116
Ultrastructural, Cytochemical, and Comparative Genomic Evidence of Peroxisomes in Three Genera of Pathogenic Free-Living Amoebae, Including the First Morphological Data for the Presence of This Organelle in Heteroloboseans. PMID:32602891
Adaptive iron utilization compensates for the lack of an inducible uptake system in Naegleria fowleri and represents a potential target for therapeutic intervention. PMID:32555641
Analysis of a Marseillevirus Transcriptome Reveals Temporal Gene Expression Profile and Host Transcriptional Shift. PMID:32390970
Encystment Induces Down-Regulation of an Acetyltransferase-Like Gene in Acanthamoeba castellanii. PMID:32357498
Whole genome sequencing of Entamoeba nuttalli reveals mammalian host-related molecular signatures and a novel octapeptide-repeat surface protein. PMID:31805050
Genome-Wide Analysis of Known and Potential Tetraspanins in Entamoeba histolytica. PMID:31684194
The most abundant cyst wall proteins of Acanthamoeba castellanii are lectins that bind cellulose and localize to distinct structures in developing and mature cyst walls. PMID:31095564
An Entamoeba-Specific Mitosomal Membrane Protein with Potential Association to the Golgi Apparatus. PMID:31086122
Genetic Diversity and Gene Family Expansions in Members of the Genus Entamoeba. PMID:30668670
Polyamines in protozoan pathogens. PMID:30333232
The invasive cell coat at the microsporidian Trachipleistophora hominis-host cell interface contains secreted hexokinases. PMID:30051624
Plasmodium parasites of birds have the most AT-rich genes of eukaryotes. PMID:29360019
Microsporidia: Obligate Intracellular Pathogens Within the Fungal Kingdom. PMID:28944750
Modulation of Zinc Homeostasis in Acanthamoeba castellanii as a Possible Antifungal Strategy against Cryptococcus gattii. PMID:28883816
The E. histolytica Genome Structure and Virulence. PMID:28497014
SilkPathDB: a comprehensive resource for the study of silkworm pathogens. PMID:28365723
Horizontal Gene Transfers from Bacteria to Entamoeba Complex: A Strategy for Dating Events along Species Divergence. PMID:27239333
A Recent Whole-Genome Duplication Divides Populations of a Globally Distributed Microsporidian. PMID:27189558
Flux Control in Glycolysis Varies Across the Tree of Life. PMID:26920685
The Development of Genetic Modification Techniques in Intracellular Parasites and Potential Applications to Microsporidia. PMID:26720003
Evaluation of the mechanisms of intron loss and gain in the social amoebae Dictyostelium. PMID:26678305
Systems analysis of host-parasite interactions. PMID:26306749
Databases for Microbiologists. PMID:26013493
Evolutionary genomics and population structure of Entamoeba histolytica. PMID:25505504
Crystal structure and putative substrate identification for the Entamoeba histolytica low molecular weight tyrosine phosphatase. PMID:24548880
Identification of the virulence landscape essential for Entamoeba histolytica invasion of the human colon. PMID:24385905
Genomic distribution of SINEs in Entamoeba histolytica strains: implication for genotyping. PMID:23815468
G protein signaling in the parasite Entamoeba histolytica. PMID:23519208
Extremely reduced levels of heterozygosity in the vertebrate pathogen Encephalitozoon cuniculi. PMID:23376943
Complete genome sequences from three genetically distinct strains reveal high intraspecies genetic diversity in the microsporidian Encephalitozoon cuniculi. PMID:23291622
Quantification of stochastic noise of splicing and polyadenylation in Entamoeba histolytica. PMID:23258700
EuPathDB: the eukaryotic pathogen database. PMID:23175615
A Multilocus Sequence Typing System (MLST) reveals a high level of diversity and a genetic component to Entamoeba histolytica virulence. PMID:22839995
Phylogenomics supports microsporidia as the earliest diverging clade of sequenced fungi. PMID:22651672
Genomic diversity of the human intestinal parasite Entamoeba histolytica. PMID:22630046
Host-Parasite interactions in Entamoeba histolytica and Entamoeba dispar: what have we learned from their genomes? PMID:21810102
Evidence of gene conversion in genes encoding the Gal/GalNac lectin complex of Entamoeba. PMID:21738808
Global analysis of gene expression in response to L-Cysteine deprivation in the anaerobic protozoan parasite Entamoeba histolytica. PMID:21627801
Tissue destruction and invasion by Entamoeba histolytica. PMID:21440507
Evolutionary genomics of Entamoeba. PMID:21288488 - http://nar.oxfordjournals.org/content/39/suppl_1/D612
Tags:
Tags
More detailed information about this field from each metasource.
model organism
metasource: Fairsharing.org
version: FAIRsharing.org: AmoebaDB; AmoebaDB; DOI: https://doi.org/10.25504/FAIRsharing.swbypy; Last edited: April 26, 2021, 3:39 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
sequence annotation
metasource: Fairsharing.org
version: FAIRsharing.org: AmoebaDB; AmoebaDB; DOI: https://doi.org/10.25504/FAIRsharing.swbypy; Last edited: April 26, 2021, 3:39 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
genomics databases (non-vertebrate)
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
unicellular eukaryotes genome databases
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
fair
metasource: re3data.org
version: re3data.org: AmoebaDB; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PX9Q last accessed: 2022-11-04
bioinformatics
metasource: re3data.org
version: re3data.org: AmoebaDB; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PX9Q last accessed: 2022-11-04
cdna/est
metasource: re3data.org
version: re3data.org: AmoebaDB; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PX9Q last accessed: 2022-11-04
genetic variation
metasource: re3data.org
version: re3data.org: AmoebaDB; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PX9Q last accessed: 2022-11-04
genomes
metasource: re3data.org
version: re3data.org: AmoebaDB; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PX9Q last accessed: 2022-11-04
genomics
metasource: re3data.org
version: re3data.org: AmoebaDB; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PX9Q last accessed: 2022-11-04
microarray expression
metasource: re3data.org
version: re3data.org: AmoebaDB; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PX9Q last accessed: 2022-11-04
protein
metasource: re3data.org
version: re3data.org: AmoebaDB; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PX9Q last accessed: 2022-11-04
sequences
metasource: re3data.org
version: re3data.org: AmoebaDB; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PX9Q last accessed: 2022-11-04
gene transcripts
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:19.758994
gene expression
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:19.758994
microarray experiment
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:19.758994
phylogenetics
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:19.758994
Tags
More detailed information about this field from each metasource.
model organism
metasource: Fairsharing.orgversion: FAIRsharing.org: AmoebaDB; AmoebaDB; DOI: https://doi.org/10.25504/FAIRsharing.swbypy; Last edited: April 26, 2021, 3:39 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
sequence annotation
metasource: Fairsharing.orgversion: FAIRsharing.org: AmoebaDB; AmoebaDB; DOI: https://doi.org/10.25504/FAIRsharing.swbypy; Last edited: April 26, 2021, 3:39 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
genomics databases (non-vertebrate)
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
unicellular eukaryotes genome databases
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
fair
metasource: re3data.orgversion: re3data.org: AmoebaDB; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PX9Q last accessed: 2022-11-04
bioinformatics
metasource: re3data.orgversion: re3data.org: AmoebaDB; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PX9Q last accessed: 2022-11-04
cdna/est
metasource: re3data.orgversion: re3data.org: AmoebaDB; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PX9Q last accessed: 2022-11-04
genetic variation
metasource: re3data.orgversion: re3data.org: AmoebaDB; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PX9Q last accessed: 2022-11-04
genomes
metasource: re3data.orgversion: re3data.org: AmoebaDB; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PX9Q last accessed: 2022-11-04
genomics
metasource: re3data.orgversion: re3data.org: AmoebaDB; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PX9Q last accessed: 2022-11-04
microarray expression
metasource: re3data.orgversion: re3data.org: AmoebaDB; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PX9Q last accessed: 2022-11-04
protein
metasource: re3data.orgversion: re3data.org: AmoebaDB; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PX9Q last accessed: 2022-11-04
sequences
metasource: re3data.orgversion: re3data.org: AmoebaDB; editing status 2021-09-09; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PX9Q last accessed: 2022-11-04
gene transcripts
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:33:19.758994
gene expression
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:33:19.758994
microarray experiment
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:33:19.758994
phylogenetics
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:33:19.758994
model organism sequence annotation genomics unicellular eukaryotes genome bioinformatics cdna/est genetic variation genomes genomics microarray expression protein sequences gene transcripts gene expression microarray experiment phylogenetics
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