gutMDisorder

a comprehensive database for dysbiosis of the gut microbiota in disorders and interventions. gutMDisorder (http: bio-annotation.cn gutMDisorder), a manually curated database, aims at providing a comprehensive resource of dysbiosis of the gut microbiota in disorders and interventions. Alterations in the composition of the gut microbial community play crucial roles in the development of chronic disorders. And the beneficial effects of drugs, foods and other intervention measures on disorders could be microbially mediated. The current version of gutMDisorder documents 2263 curated associations between 579 gut microbes and 123 disorders or 77 intervention measures in Human, and 930 curated associations between 273 gut microbes and 33 disorders or 151 intervention measures in Mouse

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gutMDisorder: a comprehensive database for dysbiosis of the gut microbiota in disorders and interventions
PMID: 31584099

metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:47.117686

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• gutMDisorder: a comprehensive database for dysbiosis of the gut microbiota in disorders and interventions PubMed citations: 62.

  62 articles citing: gutMDisorder: a comprehensive database for dysbiosis of the gut microbiota in disorders and interventions

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  Identification of Nine mRNA Signatures for Sepsis Using Random Forest. PMID:35345523

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  Online Diagnosis and Classification of CT Images Collected by Internet of Things Using Deep Learning. PMID:35345522

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  ADDAGMA: A database for domestic animal gut microbiome atlas. PMID:35222847

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  Identification of Prognostic Biomarkers for Bladder Cancer Based on DNA Methylation Profile. PMID:35174173

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  Alterations of the Gut Microbiota in Patients With Severe Chronic Heart Failure. PMID:35173696

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  Identify DNA-Binding Proteins Through the Extreme Gradient Boosting Algorithm. PMID:35154264

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  AOPM: Application of Antioxidant Protein Classification Model in Predicting the Composition of Antioxidant Drugs. PMID:35115948

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  Identification of Diagnostic Markers for Breast Cancer Based on Differential Gene Expression and Pathway Network. PMID:35096840

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  Identification of Helicobacter pylori Membrane Proteins Using Sequence-Based Features. PMID:35069791

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  Role of Probiotics in the Management of COVID-19: A Computational Perspective. PMID:35057455

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  Bioinformatics Research on Drug Sensitivity Prediction. PMID:34955863

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  Research on the Computational Prediction of Essential Genes. PMID:34938741

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  Pseudo-188D: Phage Protein Prediction Based on a Model of Pseudo-188D. PMID:34925468

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  Prediction of Gastric Cancer-Related Proteins Based on Graph Fusion Method. PMID:34790662

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  GMrepo v2: a curated human gut microbiome database with special focus on disease markers and cross-dataset comparison. PMID:34788838

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  Characterization of the Oral Microbiome Among Children With Type 1 Diabetes Compared With Healthy Children. PMID:34777313

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  A comprehensive review of the analysis and integration of omics data for SARS-CoV-2 and COVID-19. PMID:34718395

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  gutMGene: a comprehensive database for target genes of gut microbes and microbial metabolites. PMID:34500458

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  A pipeline for RNA-seq based eQTL analysis with automated quality control procedures. PMID:34433407

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  Identify Inflammatory Bowel Disease-Related Genes Based on Machine Learning. PMID:34381790

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  Amadis: A Comprehensive Database for Association Between Microbiota and Disease. PMID:34335304

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  Prioritizing Disease-Related Microbes Based on the Topological Properties of a Comprehensive Network. PMID:34326821

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  Dysbiosis of Gut Microbiota in Patients With Acute Myocardial Infarction. PMID:34295318

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  Modulation of the Gut Microbiota Structure with Probiotics and Isoflavone Alleviates Metabolic Disorder in Ovariectomized Mice. PMID:34070274

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  Identification of Gingivitis-Related Genes Across Human Tissues Based on the Summary Mendelian Randomization. PMID:34026747

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  Effects of Aricept on intestinal flora diversity in patients with mild Alzheimer's disease explored through high-throughput sequencing technology. PMID:34017407

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  Fast and Accurate Classification of Meta-Genomics Long Reads With deSAMBA. PMID:34012962

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  Significance of African Diets in Biotherapeutic Modulation of the Gut Microbiome. PMID:33994782

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  Microbiome Composition and Function in Aquatic Vertebrates: Small Organisms Making Big Impacts on Aquatic Animal Health. PMID:33776947

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  Discovering microbe-disease associations from the literature using a hierarchical long short-term memory network and an ensemble parser model. PMID:33627732

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  Predicting Cell Wall Lytic Enzymes Using Combined Features. PMID:33585423

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  Identification of Methicillin-Resistant Staphylococcus Aureus From Methicillin-Sensitive Staphylococcus Aureus and Molecular Characterization in Quanzhou, China. PMID:33553185

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  ApoPred: Identification of Apolipoproteins and Their Subfamilies With Multifarious Features. PMID:33490085

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  iPTT(2 L)-CNN: A Two-Layer Predictor for Identifying Promoters and Their Types in Plant Genomes by Convolutional Neural Network. PMID:33488763

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  Short Read Alignment Based on Maximal Approximate Match Seeds. PMID:33251246

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  Conjoint Feature Representation of GO and Protein Sequence for PPI Prediction Based on an Inception RNN Attention Network. PMID:33230427

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  Discrimination of Thermophilic Proteins and Non-thermophilic Proteins Using Feature Dimension Reduction. PMID:33195148

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  Early Diagnosis of Pancreatic Ductal Adenocarcinoma by Combining Relative Expression Orderings With Machine-Learning Method. PMID:33178697

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  Identification and Classification of Enhancers Using Dimension Reduction Technique and Recurrent Neural Network. PMID:33133227

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  MASI: microbiota-active substance interactions database. PMID:33125077

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  Comparative methods for fecal sample storage to preserve gut microbial structure and function in an in vitro model of the human colon. PMID:33085024

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  Peryton: a manual collection of experimentally supported microbe-disease associations. PMID:33080028

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  GIMICA: host genetic and immune factors shaping human microbiota. PMID:33045729

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  Identifying Heat Shock Protein Families from Imbalanced Data by Using Combined Features. PMID:33029195

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  Prediction of Anticancer Peptides Using a Low-Dimensional Feature Model. PMID:32903381

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  Comprehensive Analysis of Differentially Expressed lncRNAs in Gastric Cancer. PMID:32695786

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  Prediction of G Protein-Coupled Receptors With CTDC Extraction and MRMD2.0 Dimension-Reduction Methods. PMID:32671038

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  Identification of Human Enzymes Using Amino Acid Composition and the Composition of k-Spaced Amino Acid Pairs. PMID:32596396

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  Its2vec: Fungal Species Identification Using Sequence Embedding and Random Forest Classification. PMID:32566672

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  Disease Module Identification Based on Representation Learning of Complex Networks Integrated From GWAS, eQTL Summaries, and Human Interactome. PMID:32435638

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  GBDTL2E: Predicting lncRNA-EF Associations Using Diffusion and HeteSim Features Based on a Heterogeneous Network. PMID:32351537

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  Deep Reinforcement Learning for Data Association in Cell Tracking. PMID:32328484

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  A Mendelian Randomization Analysis to Expose the Causal Effect of IL-18 on Osteoporosis Based on Genome-Wide Association Study Data. PMID:32266232

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  A Pipeline for Reconstructing Somatic Copy Number Alternation's Subclonal Population-Based Next-Generation Sequencing Data. PMID:32180789

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  RF-PseU: A Random Forest Predictor for RNA Pseudouridine Sites. PMID:32175316

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  Pathogenic Gene Prediction Algorithm Based on Heterogeneous Information Fusion. PMID:32117433

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  6mA-RicePred: A Method for Identifying DNA N 6-Methyladenine Sites in the Rice Genome Based on Feature Fusion. PMID:32076430

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  LDL-C plays a causal role on T2DM: a Mendelian randomization analysis. PMID:32040442

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  Integrating Multi-Omics Data to Identify Novel Disease Genes and Single-Neucleotide Polymorphisms. PMID:32038707

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  eQTLMAPT: Fast and Accurate eQTL Mediation Analysis With Efficient Permutation Testing Approaches. PMID:31998368

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  GANsDTA: Predicting Drug-Target Binding Affinity Using GANs. PMID:31993067

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  Peptide-Major Histocompatibility Complex Class I Binding Prediction Based on Deep Learning With Novel Feature. PMID:31850062

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microbial ecology

metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:47.117686

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metagenomics

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version: extracted_at: 2022-11-04T11:29:47.117686

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literature and language

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version: extracted_at: 2022-11-04T11:29:47.117686

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endocrinology and metabolism

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version: extracted_at: 2022-11-04T11:29:47.117686

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model organisms

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version: extracted_at: 2022-11-04T11:29:47.117686

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microbial ecology metagenomics literature and language endocrinology and metabolism model organisms