Electrostatic potentials and hydrophobic properties of the active sites
protein sequence protein sequence motifs and active sites structure protein structure
Dictionary of binding sites in proteins
Comprehensive peptide signature database
3D structure of protein functional sites
Signature sequences at the protein N- and C-termini
Search tools for short functional motifs involved in posttranslational modifications, binding to other proteins, nucleic acids, or small molecules
Projections of protein functional Sites on Exons
Mutations in Ligand Binding Sites gene DataBase
fireDB is a database of Protein Data Bank structures, ligands and annotated functional site residues. The database can be accessed by PDB codes or UniProt accession numbers as well as keywords.
Structural motifs in protein families and superfamilies
Linear motifs in alpha-helical transmembrane proteins
O-GLYCBASE is a database of glycoproteins with O-linked and C-linked glycosylation sites. Entries with at least one experimentally verified glycosylation site have been compiled from protein sequence ...
Phosphorylation sites in various species identified by mass spectrometry
Mimotope database, active site-mimicking peptides selected from phage-display libraries
PROSITE is a database of protein families and domains. PROSITE consists of documentation entries describing protein domains, families and functional sites as well as associated patterns and profiles t ...
Protein Structure and Alternative Splicing: effects of alternative splicing events on protein structure
Manual alignments for structurally analogous motifs in proteins
Phospho3D is a database of three-dimensional structures of phosphorylation sites which stores information retrieved from the phospho.ELM database and which is enriched with structural information and ...
Protein-RNA Interface Database
The Protein Data Bank is the single worldwide archive of structural data of biological macromolecules.
NBDB database provides profiles of Elementary Functional Loops (EFLs) involved in binding of nucleotide-containing ligands. Each EFL in form of a PSSM (position-specific scoring matrix) profile is com ...