VDJbase

an adaptive immune receptor genotype and haplotype database. The adaptive immune receptor Genotype and Haplotype database. 11-Oct-2019 *NEW* - VDJbase is described in Nucleic Acids Research. VDJbase is a publicly available database that offers easy searching of genotype and haplotype data inferred from AIRR-seq datasets. From these data we can explore the variability of the genomic loci of the Ig and TR encoding genes across populations

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VDJbase: an adaptive immune receptor genotype and haplotype database
PMID: 31602484

metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:17.358111

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• VDJbase: an adaptive immune receptor genotype and haplotype database PubMed citations: 11.

  11 articles citing: VDJbase: an adaptive immune receptor genotype and haplotype database

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  T cell receptor beta germline variability is revealed by inference from repertoire data. PMID:34991709

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  Using the T Cell Receptor as a Biomarker in Type 1 Diabetes. PMID:34868047

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  Computational Inference, Validation, and Analysis of 5'UTR-Leader Sequences of Alleles of Immunoglobulin Heavy Chain Variable Genes. PMID:34671351

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  Commentary on Population matched (pm) germline allelic variants of immunoglobulin (IG) loci: relevance in infectious diseases and vaccination studies in human populations. PMID:34667305

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  Vaccine genetics of IGHV1-2 VRC01-class broadly neutralizing antibody precursor naïve human B cells. PMID:34489473

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  Machine Learning Analysis of Naïve B-Cell Receptor Repertoires Stratifies Celiac Disease Patients and Controls. PMID:33790900

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  Poorly Expressed Alleles of Several Human Immunoglobulin Heavy Chain Variable Genes are Common in the Human Population. PMID:33717051

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  The adaptive immune receptor repertoire community as a model for FAIR stewardship of big immunology data. PMID:33073065

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  A Novel Framework for Characterizing Genomic Haplotype Diversity in the Human Immunoglobulin Heavy Chain Locus. PMID:33072076

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  Polymorphisms in human immunoglobulin heavy chain variable genes and their upstream regions. PMID:32365177

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  The 27th annual Nucleic Acids Research database issue and molecular biology database collection. PMID:31906604

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genotype and phenotype

metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:17.358111

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immunology

metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:17.358111

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gene expression

metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:17.358111

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pathology

metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:17.358111

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genetic variation

metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:17.358111

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genotype and phenotype immunology gene expression pathology genetic variation