SYSTOMONAS

BioCarta Pathways

Online maps of metabolic and signaling pathways

RNApathwaysDB

A database of RNA processing pathways

ECMDB

Escherichia coli Metabolome Database

BioSilico

Integrated access to various metabolic databases

PMAP

Proteolysis Map

ClusterMine360

Microbial PKS/NRPS Biosynthesis

CeCaFDB

Carbon flux data of central metabolism in various organisms

BioCyc

The BioCyc collection of Pathway/Genome Databases (PGDBs) provides electronic reference sources on the pathways and genomes of hundreds of organisms with completely sequenced genomes. Each database co ...

MultitaskProtDB-II

Bionemo

Curated information about biodegradation-related genes and proteins

Pathguide

Pathguide: the Pathway Resource List (http://pathguide.org) is a meta-database that provides an overview of more than 190 web-accessible biological pathway and network databases. These include databas ...

HoPaCI-DB

The Host-Pathogen Interaction Database of Pseudomonas aeruginosa and Coxiella spp.

PROkariotIC Database Of Gene-Regulation

PRODORIC is a comprehensive database about gene regulation and gene expression in prokaryotes. It includes a manually curated and unique collection of transcription factor binding sites.

MetaCyc

MetaCyc is the largest curated collection of metabolic pathways currently available. It provides a comprehensive resource for metabolic pathways and enzymes from all domains of life. The pathways in M ...

TBDB

Stanford Tuberculosis Database

MetaCrop 2.0

The MetaCrop resource contains information on the major metabolic pathways mainly in crops of agricultural and economic importance. The database includes manually curated information on reactions and ...

Small Molecule Pathway Database

The Small Molecule Pathway Database (SMPDB) contains small molecule pathways found in humans, which are presented visually. All SMPDB pathways include information on the relevant organs, subcellular c ...

Pathway Commons

Pathway Commons is a convenient point of access to biological pathway information collected from public pathway databases. Information is sourced from public pathway databases and is readily searched, ...

CoryneRegNet 6.0 - Corynebacterial Regulation Network

Corynebacterial Regulation Network a reference database and analysis platform for corynebacterial transcription factors and gene regulatory networks.