Improving Pharmacovigilance Signal Detection from Clinical Notes with Locality Sensitive Neural Concept Embeddings.
PMID:35854716
Treatment with stimulants and the risk of COVID-19 complications in adults with ADHD.
PMID:35839903
Mining comorbidities of opioid use disorder from FDA adverse event reporting system and patient electronic health records.
PMID:35710401
The U.S. National Library of Medicine and standards for electronic health records: One thing led to another.
PMID:35600128
Automated Drug Coding Using Artificial Intelligence: An Evaluation of WHODrug Koda on Adverse Event Reports.
PMID:35579817
The Use of Electronic Health Records to Study Drug-Induced Hypersensitivity Reactions from 2000 to 2021: A Systematic Review.
PMID:35469629
A Standardized Dataset of a Spontaneous Adverse Event Reporting System.
PMID:35326898
Takotsubo cardiomyopathy in orthotopic liver transplant recipients: A cohort study using multi-center pooled electronic health record data.
PMID:35317180
Analysis of treatment pattern of anti-dementia medications in newly diagnosed Alzheimer's dementia using OMOP CDM.
PMID:35292697
DDIT: An Online Predictor for Multiple Clinical Phenotypic Drug-Disease Associations.
PMID:35126114
Geographic variation in and contextual factors related to biguanide adherence amongst medicaid enrolees with type 2 Diabetes Mellitus.
PMID:35106360
Curation of an international drug proprietary names dataset.
PMID:34988273
A 12-hospital prospective evaluation of a clinical decision support prognostic algorithm based on logistic regression as a form of machine learning to facilitate decision making for patients with suspected COVID-19.
PMID:34986168
Quantifying Risk Factors for Atrial Fibrillation: Retrospective Review of a Large Electronic Patient Database.
PMID:34950310
Comparison of Dimethyl Fumarate vs Fingolimod and Rituximab vs Natalizumab for Treatment of Multiple Sclerosis.
PMID:34783826
Sex differences in type 2 diabetes mellitus prevalence among persons with HIV.
PMID:34750292
Clinical knowledge extraction via sparse embedding regression (KESER) with multi-center large scale electronic health record data.
PMID:34707226
Mining drug-target and drug-adverse drug reaction databases to identify target-adverse drug reaction relationships.
PMID:34679164
A natural language processing pipeline to synthesize patient-generated notes toward improving remote care and chronic disease management: a cystic fibrosis case study.
PMID:34604710
Epidemiology of neuroendocrine tumors of the appendix in the USA: a population-based national study (2014-2019).
PMID:34475743
Illustrating potential effects of alternate control populations on real-world evidence-based statistical analyses.
PMID:34142018
Thromboembolic risk in patients with lung cancer receiving systemic therapy.
PMID:34137029
Congruence of opioid prescriptions and dispensing using electronic records and claims data.
PMID:34008209
Bone Mineral Density Screening Among People With HIV: A Population-Based Analysis in the United States.
PMID:33796595
Benchmark and Best Practices for Biomedical Knowledge Graph Embeddings.
PMID:33746351
Using computable knowledge mined from the literature to elucidate confounders for EHR-based pharmacovigilance.
PMID:33716168
ACE: the Advanced Cohort Engine for searching longitudinal patient records.
PMID:33712854
DDIWAS: High-throughput electronic health record-based screening of drug-drug interactions.
PMID:33712848
Flype: Software for enabling personalized medicine.
PMID:33270363
Analysis of Electronic Health Records Reveals Medication-Related Interference on Point-of-Care Urine Drug Screening Assays.
PMID:33216907
Towards a foundational representation of potential drug-drug interaction knowledge.
PMID:33139970
The Role of National Registries in Improving Quality of Care and Outcomes for Cardiovascular Disease.
PMID:33133356
Development of CancerLinQ, a Health Information Learning Platform From Multiple Electronic Health Record Systems to Support Improved Quality of Care.
PMID:33104389
A Computational Approach to Identify Interfering Medications on Urine Drug Screening Assays without Data from Confirmatory Testing.
PMID:32991692
The Risk of Acute Myocardial Infarction in Patients With Gastroesophageal Reflux Disease.
PMID:32989184
The Risk of Acute and Chronic Pancreatitis in Celiac Disease.
PMID:32809104
Medicare Part D Plans Rarely Cover Brand-Name Drugs When Generics Are Available.
PMID:32744944
Prescribed Opioid Use in Wisconsin 2008-2016: Findings From the Survey of the Health of Wisconsin.
PMID:32659062
Combining phenome-driven drug-target interaction prediction with patients' electronic health records-based clinical corroboration toward drug discovery.
PMID:32657406
Precision Health-Enabled Machine Learning to Identify Need for Wraparound Social Services Using Patient- and Population-Level Data Sets: Algorithm Development and Validation.
PMID:32479414
Comparative Analysis and Evaluation of State-of-the-Art Medication Mapping Tools to Transform a Local Medication Terminology to RxNorm.
PMID:32477631
Combining Social Media and FDA Adverse Event Reporting System to Detect Adverse Drug Reactions.
PMID:32385840
Tumor Necrosis Factor (TNF) blocking agents are associated with lower risk for Alzheimer's disease in patients with rheumatoid arthritis and psoriasis.
PMID:32203525
Wikidata as a knowledge graph for the life sciences.
PMID:32180547
Optimizing Antihypertensive Medication Classification in Electronic Health Record-Based Data: Classification System Development and Methodological Comparison.
PMID:32130152
medExtractR: A targeted, customizable approach to medication extraction from electronic health records.
PMID:31943012
Database of adverse events associated with drugs and drug combinations.
PMID:31882773
A Literature-Based Knowledge Graph Embedding Method for Identifying Drug Repurposing Opportunities in Rare Diseases.
PMID:31797619
Incidence of Myocardial Infarction and Cerebrovascular Accident in Patients With Hidradenitis Suppurativa.
PMID:31721983
Discovering Cross-Reactivity in Urine Drug Screening Immunoassays through Large-Scale Analysis of Electronic Health Records.
PMID:31578215
Cohort selection for clinical trials: n2c2 2018 shared task track 1.
PMID:31562516
Incidence of Long-term Opioid Use Among Opioid-Naive Patients With Hidradenitis Suppurativa in the United States.
PMID:31509172
Challenges in the construction of knowledge bases for human microbiome-disease associations.
PMID:31488215
A Real-Time Automated Patient Screening System for Clinical Trials Eligibility in an Emergency Department: Design and Evaluation.
PMID:31342909
Role of Big Data in Cardiovascular Research.
PMID:31293194
An exploration of ontology-based EMR data abstraction for diabetic kidney disease prediction.
PMID:31259027
Design and Implementation of Data Exchange Formats for Molecular Detection of Drug-Resistant Tuberculosis.
PMID:31259025
Extending i2b2 into a framework for semantic abstraction of EHR to facilitate rapid development and portability of Health IT applications.
PMID:31258990
Comparative Overall Comorbidity Burden Among Patients With Hidradenitis Suppurativa.
PMID:30994865
ScriptNumerate: A Data-to-Advice Pipeline using Compound Digital Objects to Increase the Interoperability of Computable Biomedical Knowledge.
PMID:30815084
Learning from Longitudinal Data in Electronic Health Record and Genetic Data to Improve Cardiovascular Event Prediction.
PMID:30679510
Using Electronic Health Records To Generate Phenotypes For Research.
PMID:30516347
Classification, Ontology, and Precision Medicine.
PMID:30304648
Computerized Approach to Creating a Systematic Ontology of Hematology/Oncology Regimens.
PMID:30238070
Mining FDA resources to compute population-specific frequencies of adverse drug reactions.
PMID:30197820
CATCH-KB: Establishing a Pharmacogenomics Variant Repository for Chemotherapy-Induced Cardiotoxicity.
PMID:29888066
GNOMICS: A one-stop shop for biomedical and genomic data.
PMID:29888054
Deep Learning Solutions for Classifying Patients on Opioid Use.
PMID:29854117
Overall and Subgroup Prevalence of Crohn Disease Among Patients With Hidradenitis Suppurativa: A Population-Based Analysis in the United States.
PMID:29800049
The impact of pharmacokinetic gene profiles across human cancers.
PMID:29783934
Evaluation of Multimedia Medication Reconciliation Software: A Randomized Controlled, Single-Blind Trial to Measure Diagnostic Accuracy for Discrepancy Detection.
PMID:29719884
Toward a normalized clinical drug knowledge base in China-applying the RxNorm model to Chinese clinical drugs.
PMID:29635469
Monitoring prescribing patterns using regression and electronic health records.
PMID:29258594
Causal inference on electronic health records to assess blood pressure treatment targets: an application of the parametric g formula.
PMID:29218880
Representing Knowledge Consistently Across Health Systems.
PMID:29063555
Association Between Early-Life Antibiotic Use and the Risk of Islet or Celiac Disease Autoimmunity.
PMID:29052687
Formalizing drug indications on the road to therapeutic intent.
PMID:29016968
Discovering adverse drug events combining spontaneous reports with electronic medical records: a case study of conventional DMARDs and biologics for rheumatoid arthritis.
PMID:28815115
Reverse translation of adverse event reports paves the way for de-risking preclinical off-targets.
PMID:28786378
Proton Pump Inhibitors and the Risk for Fracture at Specific Sites: Data Mining of the FDA Adverse Event Reporting System.
PMID:28717153
Sex- and Age-Adjusted Population Analysis of Prevalence Estimates for Hidradenitis Suppurativa in the United States.
PMID:28492923
BRIDG: a domain information model for translational and clinical protocol-driven research.
PMID:28339791
Comparison of three commercial knowledge bases for detection of drug-drug interactions in clinical decision support.
PMID:28339701
Detection of drug-drug interactions through data mining studies using clinical sources, scientific literature and social media.
PMID:28334070
Term Coverage of Dietary Supplements Ingredients in Product Labels.
PMID:28269965
Therapeutic indications and other use-case-driven updates in the drug ontology: anti-malarials, anti-hypertensives, opioid analgesics, and a large term request.
PMID:28253937
Definition of variables required for comprehensive description of drug dosage and clinical pharmacokinetics.
PMID:28197684
The Challenges of Electronic Health Records and Diabetes Electronic Prescribing: Implications for Safety Net Care for Diverse Populations.
PMID:28197420
Using Social Listening Data to Monitor Misuse and Nonmedical Use of Bupropion: A Content Analysis.
PMID:28148472
Towards a Consistent and Scientifically Accurate Drug Ontology.
PMID:27867326
Incidence of Exposure of Patients in the United States to Multiple Drugs for Which Pharmacogenomic Guidelines Are Available.
PMID:27764192
Using Rich Data on Comorbidities in Case-Control Study Design with Electronic Health Record Data Improves Control of Confounding in the Detection of Adverse Drug Reactions.
PMID:27716785
Context-Awareness Based Personalized Recommendation of Anti-Hypertension Drugs.
PMID:27473866
Ontology-based Vaccine and Drug Adverse Event Representation and Theory-guided Systematic Causal Network Analysis toward Integrative Pharmacovigilance Research.
PMID:27458549
Characterizing treatment pathways at scale using the OHDSI network.
PMID:27274072
Ontology-based collection, representation and analysis of drug-associated neuropathy adverse events.
PMID:27213033
An accurate and precise representation of drug ingredients.
PMID:27096073
Insight: Semantic Provenance and Analysis Platform for Multi-center Neurology Healthcare Research.
PMID:27069752
Creating Shareable Clinical Decision Support Rules for a Pharmacogenomics Clinical Guideline Using Structured Knowledge Representation.
PMID:26958298
Evaluating Term Coverage of Herbal and Dietary Supplements in Electronic Health Records.
PMID:26958277
Automatic Classification of Structured Product Labels for Pregnancy Risk Drug Categories, a Machine Learning Approach.
PMID:26958248
Approaches to Supporting the Analysis of Historical Medication Datasets with RxNorm.
PMID:26958241
Representation of Drug Use in Biomedical Standards, Clinical Text, and Research Measures.
PMID:26958169
Unravelling the human genome-phenome relationship using phenome-wide association studies.
PMID:26875678
Evaluating the implementation of RxNorm in ambulatory electronic prescriptions.
PMID:26510879
Medication-indication knowledge bases: a systematic review and critical appraisal.
PMID:26335981
Drug Normalization for Cancer Therapeutic and Druggable Genome Target Discovery.
PMID:26306243
A method for systematic discovery of adverse drug events from clinical notes.
PMID:26232442
Evaluating drug-drug interaction information in NDF-RT and DrugBank.
PMID:25964850
Evaluation of RxNorm for Medication Clinical Decision Support.
PMID:25954360
Characterizing the sublanguage of online breast cancer forums for medications, symptoms, and emotions.
PMID:25954356
Exploring adverse drug events at the class level.
PMID:25937884
A scalable neuroinformatics data flow for electrophysiological signals using MapReduce.
PMID:25852536
Mining severe drug-drug interaction adverse events using Semantic Web technologies: a case study.
PMID:25829948
Cancer based pharmacogenomics network supported with scientific evidences: from the view of drug repurposing.
PMID:25729430
Functional evaluation of out-of-the-box text-mining tools for data-mining tasks.
PMID:25336595
Standardizing adverse drug event reporting data.
PMID:25157320
EHR Big Data Deep Phenotyping. Contribution of the IMIA Genomic Medicine Working Group.
PMID:25123744
Bridging islands of information to establish an integrated knowledge base of drugs and health outcomes of interest.
PMID:24985530
Automated detection of off-label drug use.
PMID:24586689
Validation and enhancement of a computable medication indication resource (MEDI) using a large practice-based dataset.
PMID:24551419
Building a common pediatric research terminology for accelerating child health research.
PMID:24534404
Lessons learned from developing a drug evidence base to support pharmacovigilance.
PMID:24454585
Building a drug ontology based on RxNorm and other sources.
PMID:24345026
Heart beats in the cloud: distributed analysis of electrophysiological 'Big Data' using cloud computing for epilepsy clinical research.
PMID:24326538
Automated Detection of Systematic Off-label Drug Use in Free Text of Electronic Medical Records.
PMID:24303308
Extending the "web of drug identity" with knowledge extracted from United States product labels.
PMID:24303301
Chronology of your health events: approaches to extracting temporal relations from medical narratives.
PMID:24286753
Using aggregated, de-identified electronic health record data for multivariate pharmacosurveillance: a case study of azathioprine.
PMID:24177317
Some experiences and opportunities for big data in translational research.
PMID:24008998
Towards precision medicine: advances in computational approaches for the analysis of human variants.
PMID:23962656
Enabling complex queries to drug information sources through functional composition.
PMID:23920645
Using linked data for mining drug-drug interactions in electronic health records.
PMID:23920643
Epilepsy and seizure ontology: towards an epilepsy informatics infrastructure for clinical research and patient care.
PMID:23686934
Use of more than one electronic medical record system within a single health care organization.
PMID:23646091
Development and evaluation of an ensemble resource linking medications to their indications.
PMID:23576672
Extracting drug indication information from structured product labels using natural language processing.
PMID:23475786
Evaluating standard terminologies for encoding allergy information.
PMID:23396542
Issues in creating and maintaining value sets for clinical quality measures.
PMID:23304374
A study of diverse clinical decision support rule authoring environments and requirements for integration.
PMID:23145874
Mining the pharmacogenomics literature--a survey of the state of the art.
PMID:22833496
Semantator: annotating clinical narratives with semantic web ontologies.
PMID:22779043
A mutation-centric approach to identifying pharmacogenomic relations in text.
PMID:22683993
Clinical research informatics: a conceptual perspective.
PMID:22523344
Semantically enabling pharmacogenomic data for the realization of personalized medicine.
PMID:22256869