Proteasix Ontology
Names
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Proteasix Ontology
metasource: Fairsharing.org
version: FAIRsharing.org: PxO; Proteasix Ontology; DOI: https://doi.org/10.25504/FAIRsharing.zve9cc; Last edited: April 5, 2021, 9:59 a.m.; Last accessed: Jan 03 2022 7:14 p.m.
PxO
metasource: Fairsharing.org
version: FAIRsharing.org: PxO; Proteasix Ontology; DOI: https://doi.org/10.25504/FAIRsharing.zve9cc; Last edited: April 5, 2021, 9:59 a.m.; Last accessed: Jan 03 2022 7:14 p.m.
Names
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Proteasix Ontology
metasource: Fairsharing.orgversion: FAIRsharing.org: PxO; Proteasix Ontology; DOI: https://doi.org/10.25504/FAIRsharing.zve9cc; Last edited: April 5, 2021, 9:59 a.m.; Last accessed: Jan 03 2022 7:14 p.m.
PxO
metasource: Fairsharing.orgversion: FAIRsharing.org: PxO; Proteasix Ontology; DOI: https://doi.org/10.25504/FAIRsharing.zve9cc; Last edited: April 5, 2021, 9:59 a.m.; Last accessed: Jan 03 2022 7:14 p.m.
Names
More detailed information about this field from each metasource.
Proteasix Ontology
metasource: Fairsharing.orgversion: FAIRsharing.org: PxO; Proteasix Ontology; DOI: https://doi.org/10.25504/FAIRsharing.zve9cc; Last edited: April 5, 2021, 9:59 a.m.; Last accessed: Jan 03 2022 7:14 p.m.
PxO
metasource: Fairsharing.orgversion: FAIRsharing.org: PxO; Proteasix Ontology; DOI: https://doi.org/10.25504/FAIRsharing.zve9cc; Last edited: April 5, 2021, 9:59 a.m.; Last accessed: Jan 03 2022 7:14 p.m.
The Proteasix Ontology (PxO) is an ontology that supports the Proteasix tool; an open-source peptide-centric tool that can be used to predict automatically and in a large-scale fashion in silico the proteases involved in the generation of proteolytic cleavage fragments (peptides). PxO aims to describe the known proteases and their target cleavage sites, to enable the description of proteolytic cleavage fragments as the outputs of observed and predicted proteolysis, and to use knowledge about the function, species and cellular location of a protease and protein substrate to support the prioritisation of proteases in observed and predicted proteolysis. Although the Proteasix project website remains active, download / browse links to the ontology are no longer available and the owners of the resource have not confirmed its current status. Therefore we have marked this resource with an Uncertain status. Please get in touch if you can provide FAIRsharing with up-to-date information regarding this resource.
Description
More detailed information about this field from each metasource.
The Proteasix Ontology (PxO) is an ontology that supports the Proteasix tool; an open-source peptide-centric tool that can be used to predict automatically and in a large-scale fashion in silico the proteases involved in the generation of proteolytic cleavage fragments (peptides). PxO aims to describe the known proteases and their target cleavage sites, to enable the description of proteolytic cleavage fragments as the outputs of observed and predicted proteolysis, and to use knowledge about the function, species and cellular location of a protease and protein substrate to support the prioritisation of proteases in observed and predicted proteolysis. Although the Proteasix project website remains active, download / browse links to the ontology are no longer available and the owners of the resource have not confirmed its current status. Therefore we have marked this resource with an Uncertain status. Please get in touch if you can provide FAIRsharing with up-to-date information regarding this resource.
metasource: Fairsharing.orgversion: FAIRsharing.org: PxO; Proteasix Ontology; DOI: https://doi.org/10.25504/FAIRsharing.zve9cc; Last edited: April 5, 2021, 9:59 a.m.; Last accessed: Jan 03 2022 7:14 p.m.
Webpage:
https://dx.doi.org/10.1186%2Fs13326-016-0078-9Webpage
More detailed information about this field from each metasource.
https://dx.doi.org/10.1186%2Fs13326-016-0078-9
metasource: Fairsharing.orgversion: FAIRsharing.org: PxO; Proteasix Ontology; DOI: https://doi.org/10.25504/FAIRsharing.zve9cc; Last edited: April 5, 2021, 9:59 a.m.; Last accessed: Jan 03 2022 7:14 p.m.
Publications:
Publications
More detailed information about this field from each metasource.
The Proteasix Ontology
PMID: 27259807
metasource: Fairsharing.org
version: FAIRsharing.org: PxO; Proteasix Ontology; DOI: https://doi.org/10.25504/FAIRsharing.zve9cc; Last edited: April 5, 2021, 9:59 a.m.; Last accessed: Jan 03 2022 7:14 p.m.
Publications
More detailed information about this field from each metasource.
The Proteasix Ontology
PMID: 27259807
metasource: Fairsharing.org
version: FAIRsharing.org: PxO; Proteasix Ontology; DOI: https://doi.org/10.25504/FAIRsharing.zve9cc; Last edited: April 5, 2021, 9:59 a.m.; Last accessed: Jan 03 2022 7:14 p.m.
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The Proteasix Ontology
PubMed citations: 2.
2 articles citing: The Proteasix Ontology
A novel urinary biomarker predicts 1-year mortality after discharge from intensive care. PMID:31918764
Deep learning meets ontologies: experiments to anchor the cardiovascular disease ontology in the biomedical literature. PMID:29650041
Tags:
Tags
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protease cleavage
metasource: Fairsharing.org
version: FAIRsharing.org: PxO; Proteasix Ontology; DOI: https://doi.org/10.25504/FAIRsharing.zve9cc; Last edited: April 5, 2021, 9:59 a.m.; Last accessed: Jan 03 2022 7:14 p.m.
protease site
metasource: Fairsharing.org
version: FAIRsharing.org: PxO; Proteasix Ontology; DOI: https://doi.org/10.25504/FAIRsharing.zve9cc; Last edited: April 5, 2021, 9:59 a.m.; Last accessed: Jan 03 2022 7:14 p.m.
protein cleavage site prediction
metasource: Fairsharing.org
version: FAIRsharing.org: PxO; Proteasix Ontology; DOI: https://doi.org/10.25504/FAIRsharing.zve9cc; Last edited: April 5, 2021, 9:59 a.m.; Last accessed: Jan 03 2022 7:14 p.m.
proteolytic digest
metasource: Fairsharing.org
version: FAIRsharing.org: PxO; Proteasix Ontology; DOI: https://doi.org/10.25504/FAIRsharing.zve9cc; Last edited: April 5, 2021, 9:59 a.m.; Last accessed: Jan 03 2022 7:14 p.m.
Tags
More detailed information about this field from each metasource.
protease cleavage
metasource: Fairsharing.orgversion: FAIRsharing.org: PxO; Proteasix Ontology; DOI: https://doi.org/10.25504/FAIRsharing.zve9cc; Last edited: April 5, 2021, 9:59 a.m.; Last accessed: Jan 03 2022 7:14 p.m.
protease site
metasource: Fairsharing.orgversion: FAIRsharing.org: PxO; Proteasix Ontology; DOI: https://doi.org/10.25504/FAIRsharing.zve9cc; Last edited: April 5, 2021, 9:59 a.m.; Last accessed: Jan 03 2022 7:14 p.m.
protein cleavage site prediction
metasource: Fairsharing.orgversion: FAIRsharing.org: PxO; Proteasix Ontology; DOI: https://doi.org/10.25504/FAIRsharing.zve9cc; Last edited: April 5, 2021, 9:59 a.m.; Last accessed: Jan 03 2022 7:14 p.m.
proteolytic digest
metasource: Fairsharing.orgversion: FAIRsharing.org: PxO; Proteasix Ontology; DOI: https://doi.org/10.25504/FAIRsharing.zve9cc; Last edited: April 5, 2021, 9:59 a.m.; Last accessed: Jan 03 2022 7:14 p.m.
protease cleavage protease site protein cleavage site prediction proteolytic digest
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