PhytoPath
Genomics of fungal, oomycete and bacterial phytopathogens
Description
More detailed information about this field from each metasource.
Genomics of fungal, oomycete and bacterial phytopathogens
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
>>>!!!<<< This site is no longer maintained and is provided for reference only. Some functionality or links may not work. For all enquiries please contact the Ensembl Helpdesk http://www.ensembl.org/Help/Contact >>>!!!<<< PhytoPath is a new bioinformatics resource that integrates genome-scale data from important plant pathogen species with literature-curated information about the phenotypes of host infection. Using the Ensembl Genomes browser, it provides access to complete genome assembly and gene models of priority crop and model-fungal, oomycete and bacterial phytopathogens. PhytoPath also links genes to disease progression using data from the curated PHI-base resource. PhytoPath portal is a joint project bringing together Ensembl Genomes with PHI-base, a community-curated resource describing the role of genes in pathogenic infection. PhytoPath provides access to genomic and phentoypic data from fungal and oomycete plant pathogens, and has enabled a considerable increase in the coverage of phytopathogen genomes in Ensembl Fungi and Ensembl Protists. PhytoPath also provides enhanced searching of the PHI-base resource as well as the fungi and protists in Ensembl Genomes.
metasource: re3data.orgversion: re3data.org: PhytoPath; editing status 2021-09-08; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3290H last accessed: 2022-11-04
Webpage:
http://www.phytopathdb.org/Webpage
More detailed information about this field from each metasource.
http://www.phytopathdb.org/
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
metasource: re3data.org
version: re3data.org: PhytoPath; editing status 2021-09-08; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3290H last accessed: 2022-11-04
Licence:
Name: otherLicence name
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other
metasource: re3data.orgversion: re3data.org: PhytoPath; editing status 2021-09-08; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3290H last accessed: 2022-11-04
Licence URL
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https://www.ebi.ac.uk/about/terms-of-use
metasource: re3data.orgversion: re3data.org: PhytoPath; editing status 2021-09-08; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3290H last accessed: 2022-11-04
Publications:
Publications
More detailed information about this field from each metasource.
http://dx.doi.org/10.1093/nar/gkv1052
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Publications
More detailed information about this field from each metasource.
http://dx.doi.org/10.1093/nar/gkv1052
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
Tags:
Tags
More detailed information about this field from each metasource.
genomics databases (non-vertebrate)
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
general genomics databases
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
dna
metasource: re3data.org
version: re3data.org: PhytoPath; editing status 2021-09-08; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3290H last accessed: 2022-11-04
rna
metasource: re3data.org
version: re3data.org: PhytoPath; editing status 2021-09-08; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3290H last accessed: 2022-11-04
bioinformatics
metasource: re3data.org
version: re3data.org: PhytoPath; editing status 2021-09-08; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3290H last accessed: 2022-11-04
disease
metasource: re3data.org
version: re3data.org: PhytoPath; editing status 2021-09-08; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3290H last accessed: 2022-11-04
fungal pathogens
metasource: re3data.org
version: re3data.org: PhytoPath; editing status 2021-09-08; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3290H last accessed: 2022-11-04
fungi
metasource: re3data.org
version: re3data.org: PhytoPath; editing status 2021-09-08; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3290H last accessed: 2022-11-04
genes
metasource: re3data.org
version: re3data.org: PhytoPath; editing status 2021-09-08; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3290H last accessed: 2022-11-04
host infection
metasource: re3data.org
version: re3data.org: PhytoPath; editing status 2021-09-08; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3290H last accessed: 2022-11-04
oomycete pathogens
metasource: re3data.org
version: re3data.org: PhytoPath; editing status 2021-09-08; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3290H last accessed: 2022-11-04
pathogenicity
metasource: re3data.org
version: re3data.org: PhytoPath; editing status 2021-09-08; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3290H last accessed: 2022-11-04
protists
metasource: re3data.org
version: re3data.org: PhytoPath; editing status 2021-09-08; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3290H last accessed: 2022-11-04
Tags
More detailed information about this field from each metasource.
genomics databases (non-vertebrate)
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
general genomics databases
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
dna
metasource: re3data.orgversion: re3data.org: PhytoPath; editing status 2021-09-08; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3290H last accessed: 2022-11-04
rna
metasource: re3data.orgversion: re3data.org: PhytoPath; editing status 2021-09-08; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3290H last accessed: 2022-11-04
bioinformatics
metasource: re3data.orgversion: re3data.org: PhytoPath; editing status 2021-09-08; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3290H last accessed: 2022-11-04
disease
metasource: re3data.orgversion: re3data.org: PhytoPath; editing status 2021-09-08; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3290H last accessed: 2022-11-04
fungal pathogens
metasource: re3data.orgversion: re3data.org: PhytoPath; editing status 2021-09-08; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3290H last accessed: 2022-11-04
fungi
metasource: re3data.orgversion: re3data.org: PhytoPath; editing status 2021-09-08; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3290H last accessed: 2022-11-04
genes
metasource: re3data.orgversion: re3data.org: PhytoPath; editing status 2021-09-08; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3290H last accessed: 2022-11-04
host infection
metasource: re3data.orgversion: re3data.org: PhytoPath; editing status 2021-09-08; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3290H last accessed: 2022-11-04
oomycete pathogens
metasource: re3data.orgversion: re3data.org: PhytoPath; editing status 2021-09-08; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3290H last accessed: 2022-11-04
pathogenicity
metasource: re3data.orgversion: re3data.org: PhytoPath; editing status 2021-09-08; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3290H last accessed: 2022-11-04
protists
metasource: re3data.orgversion: re3data.org: PhytoPath; editing status 2021-09-08; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3290H last accessed: 2022-11-04
genomics general genomics dna rna bioinformatics disease fungal pathogens fungi gene host infection oomycete pathogens pathogenicity protists
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