Open Data Commons for Spinal Cord Injury
Names
More detailed information about this field from each metasource.
Open Data Commons for Spinal Cord Injury
metasource: Fairsharing.org
version: FAIRsharing.org: ODC-SCI; Open Data Commons for Spinal Cord Injury; DOI: https://doi.org/10.25504/FAIRsharing.M6Ruz3; Last edited: April 21, 2021, 12:56 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
ODC-SCI
metasource: Fairsharing.org
version: FAIRsharing.org: ODC-SCI; Open Data Commons for Spinal Cord Injury; DOI: https://doi.org/10.25504/FAIRsharing.M6Ruz3; Last edited: April 21, 2021, 12:56 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
Names
More detailed information about this field from each metasource.
Open Data Commons for Spinal Cord Injury
metasource: Fairsharing.orgversion: FAIRsharing.org: ODC-SCI; Open Data Commons for Spinal Cord Injury; DOI: https://doi.org/10.25504/FAIRsharing.M6Ruz3; Last edited: April 21, 2021, 12:56 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
ODC-SCI
metasource: Fairsharing.orgversion: FAIRsharing.org: ODC-SCI; Open Data Commons for Spinal Cord Injury; DOI: https://doi.org/10.25504/FAIRsharing.M6Ruz3; Last edited: April 21, 2021, 12:56 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
Names
More detailed information about this field from each metasource.
Open Data Commons for Spinal Cord Injury
metasource: Fairsharing.orgversion: FAIRsharing.org: ODC-SCI; Open Data Commons for Spinal Cord Injury; DOI: https://doi.org/10.25504/FAIRsharing.M6Ruz3; Last edited: April 21, 2021, 12:56 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
ODC-SCI
metasource: Fairsharing.orgversion: FAIRsharing.org: ODC-SCI; Open Data Commons for Spinal Cord Injury; DOI: https://doi.org/10.25504/FAIRsharing.M6Ruz3; Last edited: April 21, 2021, 12:56 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
The Open Data Commons for Spinal Cord Injury is a cloud-based community-driven repository to store, share, and publish spinal cord injury research data. There are several challenges for scientific reproducibility and bench-to-bedside translation. For example, only research and data that are published actually get disseminated, a phenomenon known as publication bias. Published research reflects to only a small fraction of all data collected, and data that do not lead to publication are largely ignored, hidden away in filing cabinets and hard drives. This results in an abundance of inaccessible scientific data known as “dark data”. Even when research is disseminated, it is usually in the form of summary reports of aggregated data (e.g. averages across individual subjects) such as scientific articles. The fact that the individual subject-level data are inaccessible further contributes to dark data. The spinal cord injury (SCI) community created the ODC-SCI to mitigate dark data in SCI research. The ODC-SCI also aims to increase transparency with individual-level data, enhance collaboration, facilitate advanced analytics, and conform to increasing mandates by funders and publishers to make data accessible. Members of the ODC-SCI have access to a private digital lab space managed by the PI or multi-PIs for dataset storage and sharing. The PIs can share their labs’ datasets with the registered members of the ODC-SCI community and make their datasets public and citable. The ODC-SCI implements stewardship principles that scientific data be made FAIR (Findable, Accessible, Interoperable and Reusable) and has been widely adopted by the international SCI research community.
Description
More detailed information about this field from each metasource.
The Open Data Commons for Spinal Cord Injury is a cloud-based community-driven repository to store, share, and publish spinal cord injury research data. There are several challenges for scientific reproducibility and bench-to-bedside translation. For example, only research and data that are published actually get disseminated, a phenomenon known as publication bias. Published research reflects to only a small fraction of all data collected, and data that do not lead to publication are largely ignored, hidden away in filing cabinets and hard drives. This results in an abundance of inaccessible scientific data known as “dark data”. Even when research is disseminated, it is usually in the form of summary reports of aggregated data (e.g. averages across individual subjects) such as scientific articles. The fact that the individual subject-level data are inaccessible further contributes to dark data. The spinal cord injury (SCI) community created the ODC-SCI to mitigate dark data in SCI research. The ODC-SCI also aims to increase transparency with individual-level data, enhance collaboration, facilitate advanced analytics, and conform to increasing mandates by funders and publishers to make data accessible. Members of the ODC-SCI have access to a private digital lab space managed by the PI or multi-PIs for dataset storage and sharing. The PIs can share their labs’ datasets with the registered members of the ODC-SCI community and make their datasets public and citable. The ODC-SCI implements stewardship principles that scientific data be made FAIR (Findable, Accessible, Interoperable and Reusable) and has been widely adopted by the international SCI research community.
metasource: Fairsharing.orgversion: FAIRsharing.org: ODC-SCI; Open Data Commons for Spinal Cord Injury; DOI: https://doi.org/10.25504/FAIRsharing.M6Ruz3; Last edited: April 21, 2021, 12:56 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
Webpage:
https://odc-sci.orgWebpage
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https://odc-sci.org
metasource: Fairsharing.orgversion: FAIRsharing.org: ODC-SCI; Open Data Commons for Spinal Cord Injury; DOI: https://doi.org/10.25504/FAIRsharing.M6Ruz3; Last edited: April 21, 2021, 12:56 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
Licence:
Name: Creative Commons Attribution 4.0 International (CC BY 4.0)Licence name
More detailed information about this field from each metasource.
Creative Commons Attribution 4.0 International (CC BY 4.0)
metasource: Fairsharing.orgversion: FAIRsharing.org: ODC-SCI; Open Data Commons for Spinal Cord Injury; DOI: https://doi.org/10.25504/FAIRsharing.M6Ruz3; Last edited: April 21, 2021, 12:56 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
Licence URL
More detailed information about this field from each metasource.
https://creativecommons.org/licenses/by/4.0/
metasource: Fairsharing.orgversion: FAIRsharing.org: ODC-SCI; Open Data Commons for Spinal Cord Injury; DOI: https://doi.org/10.25504/FAIRsharing.M6Ruz3; Last edited: April 21, 2021, 12:56 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
Publications:
(7)
Publications
More detailed information about this field from each metasource.
Big data from small data: data-sharing in the 'long tail' of neuroscience
PMID: 25349910
metasource: Fairsharing.org
version: FAIRsharing.org: ODC-SCI; Open Data Commons for Spinal Cord Injury; DOI: https://doi.org/10.25504/FAIRsharing.M6Ruz3; Last edited: April 21, 2021, 12:56 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
Topological data analysis for discovery in preclinical spinal cord injury and traumatic brain injury
PMID: 26466022
metasource: Fairsharing.org
version: FAIRsharing.org: ODC-SCI; Open Data Commons for Spinal Cord Injury; DOI: https://doi.org/10.25504/FAIRsharing.M6Ruz3; Last edited: April 21, 2021, 12:56 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
Derivation of multivariate syndromic outcome metrics for consistent testing across multiple models of cervical spinal cord injury in rats
PMID: 23544088
metasource: Fairsharing.org
version: FAIRsharing.org: ODC-SCI; Open Data Commons for Spinal Cord Injury; DOI: https://doi.org/10.25504/FAIRsharing.M6Ruz3; Last edited: April 21, 2021, 12:56 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
Development of a database for translational spinal cord injury research
PMID: 25077610
metasource: Fairsharing.org
version: FAIRsharing.org: ODC-SCI; Open Data Commons for Spinal Cord Injury; DOI: https://doi.org/10.25504/FAIRsharing.M6Ruz3; Last edited: April 21, 2021, 12:56 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
Developing a data sharing community for spinal cord injury research
PMID: 28576567
metasource: Fairsharing.org
version: FAIRsharing.org: ODC-SCI; Open Data Commons for Spinal Cord Injury; DOI: https://doi.org/10.25504/FAIRsharing.M6Ruz3; Last edited: April 21, 2021, 12:56 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
Syndromics: a bioinformatics approach for neurotrauma research
PMID: 22207883
metasource: Fairsharing.org
version: FAIRsharing.org: ODC-SCI; Open Data Commons for Spinal Cord Injury; DOI: https://doi.org/10.25504/FAIRsharing.M6Ruz3; Last edited: April 21, 2021, 12:56 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
FAIR SCI Ahead: The Evolution of the Open Data Commons for Pre-Clinical Spinal Cord Injury Research
PMID: 31608767
metasource: Fairsharing.org
version: FAIRsharing.org: ODC-SCI; Open Data Commons for Spinal Cord Injury; DOI: https://doi.org/10.25504/FAIRsharing.M6Ruz3; Last edited: April 21, 2021, 12:56 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
Publications
More detailed information about this field from each metasource.
Big data from small data: data-sharing in the 'long tail' of neuroscience
PMID: 25349910
metasource: Fairsharing.org
version: FAIRsharing.org: ODC-SCI; Open Data Commons for Spinal Cord Injury; DOI: https://doi.org/10.25504/FAIRsharing.M6Ruz3; Last edited: April 21, 2021, 12:56 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
Topological data analysis for discovery in preclinical spinal cord injury and traumatic brain injury
PMID: 26466022
metasource: Fairsharing.org
version: FAIRsharing.org: ODC-SCI; Open Data Commons for Spinal Cord Injury; DOI: https://doi.org/10.25504/FAIRsharing.M6Ruz3; Last edited: April 21, 2021, 12:56 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
Derivation of multivariate syndromic outcome metrics for consistent testing across multiple models of cervical spinal cord injury in rats
PMID: 23544088
metasource: Fairsharing.org
version: FAIRsharing.org: ODC-SCI; Open Data Commons for Spinal Cord Injury; DOI: https://doi.org/10.25504/FAIRsharing.M6Ruz3; Last edited: April 21, 2021, 12:56 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
Development of a database for translational spinal cord injury research
PMID: 25077610
metasource: Fairsharing.org
version: FAIRsharing.org: ODC-SCI; Open Data Commons for Spinal Cord Injury; DOI: https://doi.org/10.25504/FAIRsharing.M6Ruz3; Last edited: April 21, 2021, 12:56 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
Developing a data sharing community for spinal cord injury research
PMID: 28576567
metasource: Fairsharing.org
version: FAIRsharing.org: ODC-SCI; Open Data Commons for Spinal Cord Injury; DOI: https://doi.org/10.25504/FAIRsharing.M6Ruz3; Last edited: April 21, 2021, 12:56 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
Syndromics: a bioinformatics approach for neurotrauma research
PMID: 22207883
metasource: Fairsharing.org
version: FAIRsharing.org: ODC-SCI; Open Data Commons for Spinal Cord Injury; DOI: https://doi.org/10.25504/FAIRsharing.M6Ruz3; Last edited: April 21, 2021, 12:56 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
FAIR SCI Ahead: The Evolution of the Open Data Commons for Pre-Clinical Spinal Cord Injury Research
PMID: 31608767
metasource: Fairsharing.org
version: FAIRsharing.org: ODC-SCI; Open Data Commons for Spinal Cord Injury; DOI: https://doi.org/10.25504/FAIRsharing.M6Ruz3; Last edited: April 21, 2021, 12:56 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
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Big data from small data: data-sharing in the 'long tail' of neuroscience
PubMed citations: 71.
71 articles citing: Big data from small data: data-sharing in the 'long tail' of neuroscience
Open and reproducible science practices in psychoneuroendocrinology: Opportunities to foster scientific progress. PMID:35757179
Empowering Data Sharing and Analytics through the Open Data Commons for Traumatic Brain Injury Research. PMID:35403104
Is Neuroscience FAIR? A Call for Collaborative Standardisation of Neuroscience Data. PMID:35061216
Combining Animal Welfare With Experimental Rigor to Improve Reproducibility in Behavioral Neuroscience. PMID:34916915
International data governance for neuroscience. PMID:34914921
Magnetic Resonance Imaging Sequence Identification Using a Metadata Learning Approach. PMID:34867254
FAIR Data Reuse in Traumatic Brain Injury: Exploring Inflammation and Age as Moderators of Recovery in the TRACK-TBI Pilot. PMID:34803899
Developing a Dementia Platform Databank Using Multiple Existing Cohorts. PMID:34672140
The "Narratives" fMRI dataset for evaluating models of naturalistic language comprehension. PMID:34584100
Promoting FAIR Data Through Community-driven Agile Design: the Open Data Commons for Spinal Cord Injury (odc-sci.org). PMID:34347243
Constructing the rodent stereotaxic brain atlas: a survey. PMID:33860452
Excavating FAIR Data: the Case of the Multicenter Animal Spinal Cord Injury Study (MASCIS), Blood Pressure, and Neuro-Recovery. PMID:33651310
Machine intelligence identifies soluble TNFa as a therapeutic target for spinal cord injury. PMID:33564058
A Standards Organization for Open and FAIR Neuroscience: the International Neuroinformatics Coordinating Facility. PMID:33506383
To share or not to share - 10 years of European Journal of Psychotraumatology. PMID:33408814
Resting State Healthy EEG: The First Wave of the Cuban Normative Database. PMID:33335467
Simultaneous BOLD-fMRI and constant infusion FDG-PET data of the resting human brain. PMID:33087725
Profile of Data Sharing in the Clinical Neurosciences. PMID:32968588
Behavioral testing in animal models of spinal cord injury. PMID:32735871
Mouse model systems of autism spectrum disorder: Replicability and informatics signature. PMID:32445272
Embracing data preservation, sharing, and re-use in traumatic stress research. PMID:32341765
Development of an international data repository and research resource: the Prospective studies of Acute Child Trauma and Recovery (PACT/R) Data Archive. PMID:32284820
ENIGMA and global neuroscience: A decade of large-scale studies of the brain in health and disease across more than 40 countries. PMID:32198361
Reproducible and transparent research practices in published neurology research. PMID:32161667
Is useful research data usually shared? An investigation of genome-wide association study summary statistics. PMID:32084240
Biomarkers for Traumatic Brain Injury: Data Standards and Statistical Considerations. PMID:32046588
Functional Neuroimaging in the New Era of Big Data. PMID:31809864
Challenges of Processing and Analyzing Big Data in Mesoscopic Whole-brain Imaging. PMID:31805368
Quantitative firing pattern phenotyping of hippocampal neuron types. PMID:31784578
FAIR SCI Ahead: The Evolution of the Open Data Commons for Pre-Clinical Spinal Cord Injury Research. PMID:31608767
A Distributed Computing Platform for fMRI Big Data Analytics. PMID:31240237
iEEG-BIDS, extending the Brain Imaging Data Structure specification to human intracranial electrophysiology. PMID:31239438
Outcome heterogeneity and bias in acute experimental spinal cord injury: A meta-analysis. PMID:31175207
Combining Citizen Science and Deep Learning to Amplify Expertise in Neuroimaging. PMID:31139070
The open diffusion data derivatives, brain data upcycling via integrated publishing of derivatives and reproducible open cloud services. PMID:31123325
Data Dissemination: Shortening the Long Tail of Traumatic Brain Injury Dark Data. PMID:30794049
An open source web application for distributed geospatial data exploration. PMID:30747919
A beginner's guide to data stewardship and data sharing. PMID:30723254
Navigating the Murine Brain: Toward Best Practices for Determining and Documenting Neuroanatomical Locations in Experimental Studies. PMID:30450039
Neurotrauma as a big-data problem. PMID:30379703
Big Data in traumatic brain injury; promise and challenges. PMID:30202589
Data Sharing in Neurosurgery and Neurology Journals. PMID:30050735
Pre-Clinical Testing of Therapies for Traumatic Brain Injury. PMID:29756522
Data sharing in psychology. PMID:29481105
Dark data see the light. PMID:29384509
The Scope of Big Data in One Medicine: Unprecedented Opportunities and Challenges. PMID:29201868
Functional Brain Imaging Synthesis Based on Image Decomposition and Kernel Modeling: Application to Neurodegenerative Diseases. PMID:29184492
Developing a data sharing community for spinal cord injury research. PMID:28576567
Mapping the function of neuronal ion channels in model and experiment. PMID:28267430
Resources available for autism research in the big data era: a systematic review. PMID:28097074
Neuroinflammation - using big data to inform clinical practice. PMID:27857124
Hierarchical Event Descriptors (HED): Semi-Structured Tagging for Real-World Events in Large-Scale EEG. PMID:27799907
Data Publications Correlate with Citation Impact. PMID:27679558
The Virtuous Cycle of a Data Ecosystem. PMID:27490108
Proposed Training to Meet Challenges of Large-Scale Data in Neuroscience. PMID:27486398
First Proposal of Minimum Information About a Cellular Assay for Regenerative Medicine. PMID:27405781
How to study sex differences in addiction using animal models. PMID:27345022
CATI: A Large Distributed Infrastructure for the Neuroimaging of Cohorts. PMID:27066973
RegenBase: a knowledge base of spinal cord injury biology for translational research. PMID:27055827
Reproducibility in Computational Neuroscience Models and Simulations. PMID:27046845
Visualization of cortical, subcortical and deep brain neural circuit dynamics during naturalistic mammalian behavior with head-mounted microscopes and chronically implanted lenses. PMID:26914316
Annual Research Review: Discovery science strategies in studies of the pathophysiology of child and adolescent psychiatric disorders--promises and limitations. PMID:26732133
Topological data analysis for discovery in preclinical spinal cord injury and traumatic brain injury. PMID:26466022
Sharing Neuron Data: Carrots, Sticks, and Digital Records. PMID:26447712
Multidimensional Analysis of Magnetic Resonance Imaging Predicts Early Impairment in Thoracic and Thoracolumbar Spinal Cord Injury. PMID:26414451
Neuroinformatics Software Applications Supporting Electronic Data Capture, Management, and Sharing for the Neuroimaging Community. PMID:26267019
Sharing data in the global alzheimer's association interactive network. PMID:26049147
OpenfMRI: Open sharing of task fMRI data. PMID:26048618
Test-retest measurements and digital validation for in vivo neuroscience. PMID:25977807
Collaborative mining of public data resources in neuroinformatics. PMID:25852462
Brain-wide analysis of electrophysiological diversity yields novel categorization of mammalian neuron types. PMID:25810482 -
Topological data analysis for discovery in preclinical spinal cord injury and traumatic brain injury
PubMed citations: 70.
70 articles citing: Topological data analysis for discovery in preclinical spinal cord injury and traumatic brain injury
NeuMapper: A scalable computational framework for multiscale exploration of the brain's dynamical organization. PMID:35733428
Multiscale topology characterizes dynamic tumor vascular networks. PMID:35687679
Detecting Carbon Nanotube Orientation with Topological Analysis of Scanning Electron Micrographs. PMID:35457959
Empowering Data Sharing and Analytics through the Open Data Commons for Traumatic Brain Injury Research. PMID:35403104
Expert-augmented automated machine learning optimizes hemodynamic predictors of spinal cord injury outcome. PMID:35390006
A Precision Medicine Agenda in Traumatic Brain Injury. PMID:35370671
Noxious Stimulation Induces Acute Hemorrhage and Impairs Long-Term Recovery after Spinal Cord Injury (SCI) in Female Rats: Evidence Estrous Cycle May Have a Modulatory Effect. PMID:35112109
Contribution of Brain Processes to Tissue Loss After Spinal Cord Injury: Does a Pain-Induced Rise in Blood Pressure Fuel Hemorrhage? PMID:34975424
Topological network analysis of patient similarity for precision management of acute blood pressure in spinal cord injury. PMID:34783309
Hemorrhage and Locomotor Deficits Induced by Pain Input after Spinal Cord Injury Are Partially Mediated by Changes in Hemodynamics. PMID:34652956
Short review: The impact of sex on neuroimmune and cognitive outcomes after traumatic brain injury. PMID:34589813
Promoting FAIR Data Through Community-driven Agile Design: the Open Data Commons for Spinal Cord Injury (odc-sci.org). PMID:34347243
The topology of data: Opportunities for cancer research. PMID:34320632
Topological data analysis distinguishes parameter regimes in the Anderson-Chaplain model of angiogenesis. PMID:34181657
A visual analytic approach for the identification of ICU patient subpopulations using ICD diagnostic codes. PMID:33954230
Current updates in management of extremity injuries in polytrauma. PMID:33716436
Excavating FAIR Data: the Case of the Multicenter Animal Spinal Cord Injury Study (MASCIS), Blood Pressure, and Neuro-Recovery. PMID:33651310
Patient journey through cases of depression from claims database using machine learning algorithms. PMID:33592062
Machine intelligence identifies soluble TNFa as a therapeutic target for spinal cord injury. PMID:33564058
Reflections on Data Sharing Practices in Spinal Cord Injury Research. PMID:33454872
Use of Machine Learning to Re-Assess Patterns of Multivariate Functional Recovery after Fluid Percussion Injury: Operation Brain Trauma Therapy. PMID:33107380
Topology predicts long-term functional outcome in early psychosis. PMID:32632207
Pharmacological Transection of Brain-Spinal Cord Communication Blocks Pain-Induced Hemorrhage and Locomotor Deficits after Spinal Cord Injury in Rats. PMID:32368946
Learning to promote recovery after spinal cord injury. PMID:32353465
Applying univariate vs. multivariate statistics to investigate therapeutic efficacy in (pre)clinical trials: A Monte Carlo simulation study on the example of a controlled preclinical neurotrauma trial. PMID:32214370
Interpatient Similarities in Cardiac Function: A Platform for Personalized Cardiovascular Medicine. PMID:32199835
Neurocritical Care: Bench to Bedside (Eds. Claude Hemphill, Michael James) Integrating and Using Big Data in Neurocritical Care. PMID:32152955
Analyzing collective motion with machine learning and topology. PMID:31893635
Data-driven analyses of motor impairments in animal models of neurological disorders. PMID:31751328
Sleep-disordered breathing is associated with brain vascular reactivity in spinal cord injury. PMID:31694923
Semi-Supervised Topological Analysis for Elucidating Hidden Structures in High-Dimensional Transcriptome Datasets. PMID:31675340
Exploration of surgical blood pressure management and expected motor recovery in individuals with traumatic spinal cord injury. PMID:31649323
FAIR SCI Ahead: The Evolution of the Open Data Commons for Pre-Clinical Spinal Cord Injury Research. PMID:31608767
Brain-Dependent Processes Fuel Pain-Induced Hemorrhage After Spinal Cord Injury. PMID:31551720
Generating dynamical neuroimaging spatiotemporal representations (DyNeuSR) using topological data analysis. PMID:31410378
Uncovering Dynamic Brain Reconfiguration in MEG Working Memory n-Back Task Using Topological Data Analysis. PMID:31248185
Outcome heterogeneity and bias in acute experimental spinal cord injury: A meta-analysis. PMID:31175207
Artificial Intelligence in Cardiovascular Medicine. PMID:31089906
Current trends in biomarker discovery and analysis tools for traumatic brain injury. PMID:30828380
Data Dissemination: Shortening the Long Tail of Traumatic Brain Injury Dark Data. PMID:30794049
Paths to Successful Translation of New Therapies for Severe Traumatic Brain Injury in the Golden Age of Traumatic Brain Injury Research: A Pittsburgh Vision. PMID:30520681
Engaging pain fibers after a spinal cord injury fosters hemorrhage and expands the area of secondary injury. PMID:30268767
Identify and monitor clinical variation using machine intelligence: a pilot in colorectal surgery. PMID:30251058
Malaria intensity in Colombia by regions and populations. PMID:30208075
Multi-Center Pre-clinical Consortia to Enhance Translation of Therapies and Biomarkers for Traumatic Brain Injury: Operation Brain Trauma Therapy and Beyond. PMID:30131759
Testing a Multivariate Proteomic Panel for Traumatic Brain Injury Biomarker Discovery: A TRACK-TBI Pilot Study. PMID:30084741
Enabling Precision Cardiology Through Multiscale Biology and Systems Medicine. PMID:30062151
Development of an International Canine Spinal Cord Injury observational registry: a collaborative data-sharing network to optimize translational studies of SCI. PMID:29795173
Using multidimensional topological data analysis to identify traits of hip osteoarthritis. PMID:29734501
Analysis of Big Data in Gait Biomechanics: Current Trends and Future Directions. PMID:29670502
Innate immune responses to trauma. PMID:29507356
Data sharing in psychology. PMID:29481105
Dark data see the light. PMID:29384509
A metabolic function of FGFR3-TACC3 gene fusions in cancer. PMID:29323298
Novel subgroups of attention-deficit/hyperactivity disorder identified by topological data analysis and their functional network modular organizations. PMID:28829775
Translational Stroke Research: Vision and Opportunities. PMID:28751554
Developing a data sharing community for spinal cord injury research. PMID:28576567
MRI and biomechanics multidimensional data analysis reveals R2 -R1ρ as an early predictor of cartilage lesion progression in knee osteoarthritis. PMID:28471543
Associations Between Anesthetic Variables and Functional Outcome in Dogs With Thoracolumbar Intervertebral Disk Extrusion Undergoing Decompressive Hemilaminectomy. PMID:28295616
Identification of Topological Network Modules in Perturbed Protein Interaction Networks. PMID:28272416
Uncovering precision phenotype-biomarker associations in traumatic brain injury using topological data analysis. PMID:28257413
Pulmonary outcomes following specialized respiratory management for acute cervical spinal cord injury: a retrospective analysis. PMID:28220822
A data-driven approach for evaluating multi-modal therapy in traumatic brain injury. PMID:28205533
What Is Being Trained? How Divergent Forms of Plasticity Compete To Shape Locomotor Recovery after Spinal Cord Injury. PMID:27875927
A personality trait contributes to the occurrence of postoperative delirium: a prospective study. PMID:27809817
Omics-Based Strategies in Precision Medicine: Toward a Paradigm Shift in Inborn Errors of Metabolism Investigations. PMID:27649151
Big Data: transforming drug development and health policy decision making. PMID:27594803
Acridine Derivatives as Inhibitors of the IRE1α-XBP1 Pathway Are Cytotoxic to Human Multiple Myeloma. PMID:27307600
How Many Parameters Does It Take to Describe Disease Tolerance? PMID:27088212
Multidimensional Analysis of Magnetic Resonance Imaging Predicts Early Impairment in Thoracic and Thoracolumbar Spinal Cord Injury. PMID:26414451 -
Derivation of multivariate syndromic outcome metrics for consistent testing across multiple models of cervical spinal cord injury in rats
PubMed citations: 41.
41 articles citing: Derivation of multivariate syndromic outcome metrics for consistent testing across multiple models of cervical spinal cord injury in rats
Empowering Data Sharing and Analytics through the Open Data Commons for Traumatic Brain Injury Research. PMID:35403104
Long-Term Effects of Neural Precursor Cell Transplantation on Secondary Injury Processes and Functional Recovery after Severe Cervical Contusion-Compression Spinal Cord Injury. PMID:34884911
The impact of deep space radiation on cognitive performance: From biological sex to biomarkers to countermeasures. PMID:34652936
Promoting FAIR Data Through Community-driven Agile Design: the Open Data Commons for Spinal Cord Injury (odc-sci.org). PMID:34347243
Excavating FAIR Data: the Case of the Multicenter Animal Spinal Cord Injury Study (MASCIS), Blood Pressure, and Neuro-Recovery. PMID:33651310
Machine intelligence identifies soluble TNFa as a therapeutic target for spinal cord injury. PMID:33564058
A Standards Organization for Open and FAIR Neuroscience: the International Neuroinformatics Coordinating Facility. PMID:33506383
Reflections on Data Sharing Practices in Spinal Cord Injury Research. PMID:33454872
Reproducible analysis of disease space via principal components using the novel R package syndRomics. PMID:33443012
Principal component analysis, a useful tool to study cyclin-dependent kinase-inhibitor's effect on cerebral ischaemia. PMID:33094284
A Multi-Modal Assessment of Clinical Predictors for Traumatic Brain Injury End-Points. PMID:33023400
Association Between Magnetic Resonance Imaging-Based Spinal Morphometry and Sensorimotor Behavior in a Hemicontusion Model of Incomplete Cervical Spinal Cord Injury in Rats. PMID:32981350
An Analysis of Variability in "CatWalk" Locomotor Measurements to Aid Experimental Design and Interpretation. PMID:32647037
The effects of mouse strain and age on a model of unilateral cervical contusion spinal cord injury. PMID:32542053
Designer, injectable gels to prevent transplanted Schwann cell loss during spinal cord injury therapy. PMID:32270042
Applying univariate vs. multivariate statistics to investigate therapeutic efficacy in (pre)clinical trials: A Monte Carlo simulation study on the example of a controlled preclinical neurotrauma trial. PMID:32214370
Evolution of Magnetic Resonance Imaging as Predictors and Correlates of Functional Outcome after Spinal Cord Contusion Injury in the Rat. PMID:31830856
Exploration of surgical blood pressure management and expected motor recovery in individuals with traumatic spinal cord injury. PMID:31649323
FAIR SCI Ahead: The Evolution of the Open Data Commons for Pre-Clinical Spinal Cord Injury Research. PMID:31608767
Chondroitinase improves anatomical and functional outcomes after primate spinal cord injury. PMID:31235933
Testing a Multivariate Proteomic Panel for Traumatic Brain Injury Biomarker Discovery: A TRACK-TBI Pilot Study. PMID:30084741
Pre-Clinical Testing of Therapies for Traumatic Brain Injury. PMID:29756522
Filter-probe diffusion imaging improves spinal cord injury outcome prediction. PMID:29752739
Restorative effects of human neural stem cell grafts on the primate spinal cord. PMID:29480894
Developing a data sharing community for spinal cord injury research. PMID:28576567
Pulmonary outcomes following specialized respiratory management for acute cervical spinal cord injury: a retrospective analysis. PMID:28220822
A data-driven approach for evaluating multi-modal therapy in traumatic brain injury. PMID:28205533
Animal models of spinal cord injury: a systematic review. PMID:28117332
Rapid in vivo detection of rat spinal cord injury with double-diffusion-encoded magnetic resonance spectroscopy. PMID:27080726
A Unilateral Cervical Spinal Cord Contusion Injury Model in Non-Human Primates (Macaca mulatta). PMID:26788611
Topological data analysis for discovery in preclinical spinal cord injury and traumatic brain injury. PMID:26466022
Pronounced species divergence in corticospinal tract reorganization and functional recovery after lateralized spinal cord injury favors primates. PMID:26311729
Noninvasive Reactivation of Motor Descending Control after Paralysis. PMID:26077679
CCR2 antagonism alters brain macrophage polarization and ameliorates cognitive dysfunction induced by traumatic brain injury. PMID:25589768
Leveraging biomedical informatics for assessing plasticity and repair in primate spinal cord injury. PMID:25451131
Big data from small data: data-sharing in the 'long tail' of neuroscience. PMID:25349910
Neural precursor cell transplantation enhances functional recovery and reduces astrogliosis in bilateral compressive/contusive cervical spinal cord injury. PMID:25107585
Development of a database for translational spinal cord injury research. PMID:25077610
The Irvine, Beatties, and Bresnahan (IBB) Forelimb Recovery Scale: An Assessment of Reliability and Validity. PMID:25071704
Minimum information about a spinal cord injury experiment: a proposed reporting standard for spinal cord injury experiments. PMID:24870067
Combined SCI and TBI: recovery of forelimb function after unilateral cervical spinal cord injury (SCI) is retarded by contralateral traumatic brain injury (TBI), and ipsilateral TBI balances the effects of SCI on paw placement. PMID:23770071 -
Development of a database for translational spinal cord injury research
PubMed citations: 28.
28 articles citing: Development of a database for translational spinal cord injury research
Promoting FAIR Data Through Community-driven Agile Design: the Open Data Commons for Spinal Cord Injury (odc-sci.org). PMID:34347243
Excavating FAIR Data: the Case of the Multicenter Animal Spinal Cord Injury Study (MASCIS), Blood Pressure, and Neuro-Recovery. PMID:33651310
Machine intelligence identifies soluble TNFa as a therapeutic target for spinal cord injury. PMID:33564058
Reflections on Data Sharing Practices in Spinal Cord Injury Research. PMID:33454872
Reproducible analysis of disease space via principal components using the novel R package syndRomics. PMID:33443012
Behavioral testing in animal models of spinal cord injury. PMID:32735871
The Influence of Neuron-Extrinsic Factors and Aging on Injury Progression and Axonal Repair in the Central Nervous System. PMID:32269994
Applying univariate vs. multivariate statistics to investigate therapeutic efficacy in (pre)clinical trials: A Monte Carlo simulation study on the example of a controlled preclinical neurotrauma trial. PMID:32214370
Exploration of surgical blood pressure management and expected motor recovery in individuals with traumatic spinal cord injury. PMID:31649323
A brief period of moderate noxious stimulation induces hemorrhage and impairs locomotor recovery after spinal cord injury. PMID:31647990
FAIR SCI Ahead: The Evolution of the Open Data Commons for Pre-Clinical Spinal Cord Injury Research. PMID:31608767
Data Dissemination: Shortening the Long Tail of Traumatic Brain Injury Dark Data. PMID:30794049
Preface - Practical and theoretical considerations for performing a multi-center preclinical biomarker discovery study of post-traumatic epileptogenesis: lessons learned from the EpiBioS4Rx consortium. PMID:30685321
Development of an International Canine Spinal Cord Injury observational registry: a collaborative data-sharing network to optimize translational studies of SCI. PMID:29795173
Spinal cord injury pharmacotherapy: Current research & development and competitive commercial landscape as of 2015. PMID:29485334
Data sharing in psychology. PMID:29481105
Dark data see the light. PMID:29384509
Translational Stroke Research: Vision and Opportunities. PMID:28751554
Developing a data sharing community for spinal cord injury research. PMID:28576567
Pulmonary outcomes following specialized respiratory management for acute cervical spinal cord injury: a retrospective analysis. PMID:28220822
Plasticity and Recovery After Dorsal Column Spinal Cord Injury in Nonhuman Primates. PMID:27578996
Effect of kidney-reinforcing and marrow-beneficial Chinese medicine on bone metabolism-related factors following spinal cord injury in rats. PMID:27347083
Topological data analysis for discovery in preclinical spinal cord injury and traumatic brain injury. PMID:26466022
Leveraging biomedical informatics for assessing plasticity and repair in primate spinal cord injury. PMID:25451131
Big data from small data: data-sharing in the 'long tail' of neuroscience. PMID:25349910
Long-Term Consequences of Traumatic Brain Injury: Current Status of Potential Mechanisms of Injury and Neurological Outcomes. PMID:25158206
The Irvine, Beatties, and Bresnahan (IBB) Forelimb Recovery Scale: An Assessment of Reliability and Validity. PMID:25071704
Minimum information about a spinal cord injury experiment: a proposed reporting standard for spinal cord injury experiments. PMID:24870067 -
Developing a data sharing community for spinal cord injury research
PubMed citations: 19.
19 articles citing: Developing a data sharing community for spinal cord injury research
Empowering Data Sharing and Analytics through the Open Data Commons for Traumatic Brain Injury Research. PMID:35403104
Pluripotent Stem Cells for Spinal Cord Injury Repair. PMID:34943842
Excavating FAIR Data: the Case of the Multicenter Animal Spinal Cord Injury Study (MASCIS), Blood Pressure, and Neuro-Recovery. PMID:33651310
Reflections on Data Sharing Practices in Spinal Cord Injury Research. PMID:33454872
Reproducible analysis of disease space via principal components using the novel R package syndRomics. PMID:33443012
The Life of a Trailing Spouse. PMID:33408132
The neuroanatomical-functional paradox in spinal cord injury. PMID:33311711
Considerations for Studying Sex as a Biological Variable in Spinal Cord Injury. PMID:32849242
The translational landscape in spinal cord injury: focus on neuroplasticity and regeneration. PMID:31728042
FAIR SCI Ahead: The Evolution of the Open Data Commons for Pre-Clinical Spinal Cord Injury Research. PMID:31608767
Reorganization of the brain in spinal cord injury: a meta-analysis of functional MRI studies. PMID:31420686
Outcome heterogeneity and bias in acute experimental spinal cord injury: A meta-analysis. PMID:31175207
Data Dissemination: Shortening the Long Tail of Traumatic Brain Injury Dark Data. PMID:30794049
A beginner's guide to data stewardship and data sharing. PMID:30723254
Neurotrauma as a big-data problem. PMID:30379703
Development of an International Canine Spinal Cord Injury observational registry: a collaborative data-sharing network to optimize translational studies of SCI. PMID:29795173
Translating promising strategies for bowel and bladder management in spinal cord injury. PMID:29753647
Credibility, Replicability, and Reproducibility in Simulation for Biomedicine and Clinical Applications in Neuroscience. PMID:29713272
Dark data see the light. PMID:29384509 -
Syndromics: a bioinformatics approach for neurotrauma research
PubMed citations: 19.
19 articles citing: Syndromics: a bioinformatics approach for neurotrauma research
Excavating FAIR Data: the Case of the Multicenter Animal Spinal Cord Injury Study (MASCIS), Blood Pressure, and Neuro-Recovery. PMID:33651310
Acute post-injury blockade of α2δ-1 calcium channel subunits prevents pathological autonomic plasticity after spinal cord injury. PMID:33503436
Reflections on Data Sharing Practices in Spinal Cord Injury Research. PMID:33454872
Reproducible analysis of disease space via principal components using the novel R package syndRomics. PMID:33443012
Applying univariate vs. multivariate statistics to investigate therapeutic efficacy in (pre)clinical trials: A Monte Carlo simulation study on the example of a controlled preclinical neurotrauma trial. PMID:32214370
Sleep-disordered breathing is associated with brain vascular reactivity in spinal cord injury. PMID:31694923
Exploration of surgical blood pressure management and expected motor recovery in individuals with traumatic spinal cord injury. PMID:31649323
Differential fracture response to traumatic brain injury suggests dominance of neuroinflammatory response in polytrauma. PMID:31434912
Data Dissemination: Shortening the Long Tail of Traumatic Brain Injury Dark Data. PMID:30794049
Testing a Multivariate Proteomic Panel for Traumatic Brain Injury Biomarker Discovery: A TRACK-TBI Pilot Study. PMID:30084741
Developing a data sharing community for spinal cord injury research. PMID:28576567
Pulmonary outcomes following specialized respiratory management for acute cervical spinal cord injury: a retrospective analysis. PMID:28220822
A data-driven approach for evaluating multi-modal therapy in traumatic brain injury. PMID:28205533
What Is Being Trained? How Divergent Forms of Plasticity Compete To Shape Locomotor Recovery after Spinal Cord Injury. PMID:27875927
Leveraging biomedical informatics for assessing plasticity and repair in primate spinal cord injury. PMID:25451131
Development of a database for translational spinal cord injury research. PMID:25077610
The Irvine, Beatties, and Bresnahan (IBB) Forelimb Recovery Scale: An Assessment of Reliability and Validity. PMID:25071704
Translational research in neurotrauma: novel mechanisms and emerging therapies. PMID:24323677
Derivation of multivariate syndromic outcome metrics for consistent testing across multiple models of cervical spinal cord injury in rats. PMID:23544088 -
FAIR SCI Ahead: The Evolution of the Open Data Commons for Pre-Clinical Spinal Cord Injury Research
PubMed citations: 12.
12 articles citing: FAIR SCI Ahead: The Evolution of the Open Data Commons for Pre-Clinical Spinal Cord Injury Research
Empowering Data Sharing and Analytics through the Open Data Commons for Traumatic Brain Injury Research. PMID:35403104
Age-Dependent Decline in Neuron Growth Potential and Mitochondria Functions in Cortical Neurons. PMID:34209640
Excavating FAIR Data: the Case of the Multicenter Animal Spinal Cord Injury Study (MASCIS), Blood Pressure, and Neuro-Recovery. PMID:33651310
Reflections on Data Sharing Practices in Spinal Cord Injury Research. PMID:33454872
Reproducible analysis of disease space via principal components using the novel R package syndRomics. PMID:33443012
The Life of a Trailing Spouse. PMID:33408132
Are mitochondria the key to reduce the age-dependent decline in axon growth after spinal cord injury? PMID:33318447
The neuroanatomical-functional paradox in spinal cord injury. PMID:33311711
Pre-Clinical Common Data Elements for Traumatic Brain Injury Research: Progress and Use Cases. PMID:33297844
Considerations for Studying Sex as a Biological Variable in Spinal Cord Injury. PMID:32849242
Behavioral testing in animal models of spinal cord injury. PMID:32735871
The Influence of Neuron-Extrinsic Factors and Aging on Injury Progression and Axonal Repair in the Central Nervous System. PMID:32269994
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version: FAIRsharing.org: ODC-SCI; Open Data Commons for Spinal Cord Injury; DOI: https://doi.org/10.25504/FAIRsharing.M6Ruz3; Last edited: April 21, 2021, 12:56 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
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metasource: Fairsharing.orgversion: FAIRsharing.org: ODC-SCI; Open Data Commons for Spinal Cord Injury; DOI: https://doi.org/10.25504/FAIRsharing.M6Ruz3; Last edited: April 21, 2021, 12:56 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
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