OBOE: The Extensible Observation Ontology
Names
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OBOE: The Extensible Observation Ontology
metasource: Fairsharing.org
version: FAIRsharing.org: OBOE; OBOE: The Extensible Observation Ontology; DOI: https://doi.org/10.25504/FAIRsharing.5970hq; Last edited: July 14, 2021, 11:56 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
OBOE
metasource: Fairsharing.org
version: FAIRsharing.org: OBOE; OBOE: The Extensible Observation Ontology; DOI: https://doi.org/10.25504/FAIRsharing.5970hq; Last edited: July 14, 2021, 11:56 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: Version 1.2 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/OBOE
The Extensible Observation Ontology
metasource: Biontology / Bioportal
version: Version 1.2 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/OBOE
Names
More detailed information about this field from each metasource.
OBOE: The Extensible Observation Ontology
metasource: Fairsharing.orgversion: FAIRsharing.org: OBOE; OBOE: The Extensible Observation Ontology; DOI: https://doi.org/10.25504/FAIRsharing.5970hq; Last edited: July 14, 2021, 11:56 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
OBOE
metasource: Fairsharing.orgversion: FAIRsharing.org: OBOE; OBOE: The Extensible Observation Ontology; DOI: https://doi.org/10.25504/FAIRsharing.5970hq; Last edited: July 14, 2021, 11:56 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: Version 1.2 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/OBOE
The Extensible Observation Ontology
metasource: Biontology / Bioportalversion: Version 1.2 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/OBOE
Other names: OBOE, The Extensible Observation Ontology
Names
More detailed information about this field from each metasource.
OBOE: The Extensible Observation Ontology
metasource: Fairsharing.orgversion: FAIRsharing.org: OBOE; OBOE: The Extensible Observation Ontology; DOI: https://doi.org/10.25504/FAIRsharing.5970hq; Last edited: July 14, 2021, 11:56 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
OBOE
metasource: Fairsharing.orgversion: FAIRsharing.org: OBOE; OBOE: The Extensible Observation Ontology; DOI: https://doi.org/10.25504/FAIRsharing.5970hq; Last edited: July 14, 2021, 11:56 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: Version 1.2 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/OBOE
The Extensible Observation Ontology
metasource: Biontology / Bioportalversion: Version 1.2 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/OBOE
OBOE is a suite of OWL-DL ontologies for modeling and representing scientific observations. The OBOE model is designed as a generic data model with a number of constructs for defining observational data. Key features of OBOE include its ability to represent a wide range of measurement types, a mechanism for specifying measurement context, and the ability to associate the type of entity (e.g., sample, organism, etc.) being measured. OBOE is being used and developed within the Semtools project for describing a wide variety of ecological data stored within the Knowledge Network for Biodiversity (KNB) as well as extensions for ontology-based data annotation and discovery within the MetaCat software infrastructure.
Description
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OBOE is a suite of OWL-DL ontologies for modeling and representing scientific observations. The OBOE model is designed as a generic data model with a number of constructs for defining observational data. Key features of OBOE include its ability to represent a wide range of measurement types, a mechanism for specifying measurement context, and the ability to associate the type of entity (e.g., sample, organism, etc.) being measured. OBOE is being used and developed within the Semtools project for describing a wide variety of ecological data stored within the Knowledge Network for Biodiversity (KNB) as well as extensions for ontology-based data annotation and discovery within the MetaCat software infrastructure.
metasource: Fairsharing.orgversion: FAIRsharing.org: OBOE; OBOE: The Extensible Observation Ontology; DOI: https://doi.org/10.25504/FAIRsharing.5970hq; Last edited: July 14, 2021, 11:56 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
The Extensible Observation Ontology (OBOE) is a formal ontology for capturing the semantics of scientific observation and measurement. The ontology supports researchers to add detailed semantic annotations to scientific data, thereby clarifying the inherent meaning of scientific observations. The main concepts in OBOE include: - Observation: an event in which one or more measurements are taken - Measurement: the measured value of a property for a specific object or phenomenon (e.g., 3.2) - Entity: an object or phenomenon on which measurements are made (e.g., Quercus rubrum) - Characteristic: the property being measured (e.g., VolumetricDensity) - Standard: units and controlled vocabularies for interpreting measured values (e.g., g/cm^3) - Protocol: the procedures followed to obtain measurements (e.g., DensityProtocol2014) OBOE can characterize the context of an observation (e.g., space and time), as well as dependencies such as nested experimental observations. It includes an extensive set of unit definitions (e.g., grams of carbon per liter of seawater), and can facilitate automatic unit conversions (e.g., pounds to kilograms). OBOE can be easily extended to create Entities and Characteristics for specific research domains, making it both broadly applicable and highly customizable. OBOE is being used to improve data interpretation, facilitate reuse, and create precise and effective systems for data search and discovery.
metasource: Biontology / Bioportalversion: Version 1.2 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/OBOE
Webpage:
https://github.com/NCEAS/oboe/Webpage
More detailed information about this field from each metasource.
https://github.com/NCEAS/oboe/
metasource: Fairsharing.orgversion: FAIRsharing.org: OBOE; OBOE: The Extensible Observation Ontology; DOI: https://doi.org/10.25504/FAIRsharing.5970hq; Last edited: July 14, 2021, 11:56 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
https://github.com/NCEAS/oboe
metasource: Biontology / Bioportalversion: Version 1.2 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/OBOE
Licence:
Name: Creative Commons Attribution 3.0 Unported (CC BY 3.0)Licence name
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Creative Commons Attribution 3.0 Unported (CC BY 3.0)
metasource: Fairsharing.orgversion: FAIRsharing.org: OBOE; OBOE: The Extensible Observation Ontology; DOI: https://doi.org/10.25504/FAIRsharing.5970hq; Last edited: July 14, 2021, 11:56 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
Licence URL
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https://creativecommons.org/licenses/by/3.0/
metasource: Fairsharing.orgversion: FAIRsharing.org: OBOE; OBOE: The Extensible Observation Ontology; DOI: https://doi.org/10.25504/FAIRsharing.5970hq; Last edited: July 14, 2021, 11:56 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
Publications:
Publications
More detailed information about this field from each metasource.
https://doi.org/10.1016/j.ecoinf.2007.05.004
metasource: Fairsharing.org
version: FAIRsharing.org: OBOE; OBOE: The Extensible Observation Ontology; DOI: https://doi.org/10.25504/FAIRsharing.5970hq; Last edited: July 14, 2021, 11:56 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
Madin, J., S. Bowers, M. Schildhauer, S. Krivov, D. Pennington, and F. Villa. 2007. An ontology for describing and synthesizing ecological observation data. Ecological Informatics 2:279–296. doi:10.1016/j.ecoinf.2007.05.004
metasource: Biontology / Bioportal
version: Version 1.2 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/OBOE
Publications
More detailed information about this field from each metasource.
https://doi.org/10.1016/j.ecoinf.2007.05.004
metasource: Fairsharing.orgversion: FAIRsharing.org: OBOE; OBOE: The Extensible Observation Ontology; DOI: https://doi.org/10.25504/FAIRsharing.5970hq; Last edited: July 14, 2021, 11:56 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
Madin, J., S. Bowers, M. Schildhauer, S. Krivov, D. Pennington, and F. Villa. 2007. An ontology for describing and synthesizing ecological observation data. Ecological Informatics 2:279–296. doi:10.1016/j.ecoinf.2007.05.004
metasource: Biontology / Bioportalversion: Version 1.2 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/OBOE
- https://doi.org/10.1016/j.ecoinf.2007.05.004
- Madin, J., S. Bowers, M. Schildhauer, S. Krivov, D. Pennington, and F. Villa. 2007. An ontology for describing and synthesizing ecological observation data. Ecological Informatics 2:279–296. doi:10.1016/j.ecoinf.2007.05.004
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