NCBI Epigenomics
Names
More detailed information about this field from each metasource.
NCBI Epigenomics
metasource: re3data.org
version: re3data.org: NCBI Epigenomics; editing status 2019-04-26; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R34K7J last accessed: 2022-11-04
metasource: bio.tools
version: extracted_at: 2022-11-04T11:36:08.567239
ncbi_epigenomics
metasource: bio.tools
version: extracted_at: 2022-11-04T11:36:08.567239
Names
More detailed information about this field from each metasource.
NCBI Epigenomics
metasource: re3data.orgversion: re3data.org: NCBI Epigenomics; editing status 2019-04-26; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R34K7J last accessed: 2022-11-04
metasource: bio.tools
version: extracted_at: 2022-11-04T11:36:08.567239
ncbi_epigenomics
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:36:08.567239
Names
More detailed information about this field from each metasource.
NCBI Epigenomics
metasource: re3data.orgversion: re3data.org: NCBI Epigenomics; editing status 2019-04-26; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R34K7J last accessed: 2022-11-04
metasource: bio.tools
version: extracted_at: 2022-11-04T11:36:08.567239
ncbi_epigenomics
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:36:08.567239
This source may no longer be available. No known URL could be resolved successfully.
>>>!!! <<< The Epigenomics database was retired on June 1, 2016. All epigenomics data are available in our GEO resource https://www.ncbi.nlm.nih.gov/geo >>> !!! <<< The Epigenomics database provides genomics maps of stable and reprogrammable nuclear changes that control gene expression and influence health. Users can browse current epigenomic experiments as well as search, compare and browse samples from multiple biological sources in gene-specific contexts. Many epigenomes contain modifications with histone marks, DNA methylation and chromatin structure activity. NCBI Epigenomics database contains datasets from the NIH Roadmap Epigenomics Project.
Description
More detailed information about this field from each metasource.
>>>!!! <<< The Epigenomics database was retired on June 1, 2016. All epigenomics data are available in our GEO resource https://www.ncbi.nlm.nih.gov/geo >>> !!! <<< The Epigenomics database provides genomics maps of stable and reprogrammable nuclear changes that control gene expression and influence health. Users can browse current epigenomic experiments as well as search, compare and browse samples from multiple biological sources in gene-specific contexts. Many epigenomes contain modifications with histone marks, DNA methylation and chromatin structure activity. NCBI Epigenomics database contains datasets from the NIH Roadmap Epigenomics Project.
metasource: re3data.orgversion: re3data.org: NCBI Epigenomics; editing status 2019-04-26; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R34K7J last accessed: 2022-11-04
Resource for whole-genome epigenetic data sets. Raw data is processed and mapped to genomic coordinates to generate 'tracks' that are a visual representation of the data. These data tracks can be viewed using popular genome browsers or downloaded for local analysis. This resource also provides the user with a unique interface that allows for intuitive browsing and searching of data sets based on biological attributes.
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:36:08.567239
Webpage:
http://www.ncbi.nlm.nih.gov/epigenomicsWebpage
More detailed information about this field from each metasource.
http://www.ncbi.nlm.nih.gov/epigenomics
metasource: re3data.orgversion: re3data.org: NCBI Epigenomics; editing status 2019-04-26; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R34K7J last accessed: 2022-11-04
metasource: bio.tools
version: extracted_at: 2022-11-04T11:36:08.567239
Licence:
Name: otherLicence name
More detailed information about this field from each metasource.
other
metasource: re3data.orgversion: re3data.org: NCBI Epigenomics; editing status 2019-04-26; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R34K7J last accessed: 2022-11-04
Licence URL
More detailed information about this field from each metasource.
https://www.ncbi.nlm.nih.gov/home/about/policies/
metasource: re3data.orgversion: re3data.org: NCBI Epigenomics; editing status 2019-04-26; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R34K7J last accessed: 2022-11-04
Publications:
Publications
More detailed information about this field from each metasource.
NCBI Epigenomics: a new public resource for exploring epigenomic data sets
PMID: 21075792
metasource: bio.tools
version: extracted_at: 2022-11-04T11:36:08.567239
Publications
More detailed information about this field from each metasource.
NCBI Epigenomics: a new public resource for exploring epigenomic data sets
PMID: 21075792
metasource: bio.tools
version: extracted_at: 2022-11-04T11:36:08.567239
-
NCBI Epigenomics: a new public resource for exploring epigenomic data sets
PubMed citations: 26.
26 articles citing: NCBI Epigenomics: a new public resource for exploring epigenomic data sets
Novel gene variants associated with cardiovascular disease in systemic lupus erythematosus and rheumatoid arthritis. PMID:29514802
Functional Variants Identified Efficiently through an Integrated Transcriptome and Epigenome Analysis. PMID:29440655
Nuclear receptors in cancer - uncovering new and evolving roles through genomic analysis. PMID:29279606
The gymnastics of epigenomics in rice. PMID:28866772
iHMS: a database integrating human histone modification data across developmental stages and tissues. PMID:28187703
ePIANNO: ePIgenomics ANNOtation tool. PMID:26859295
Database resources of the National Center for Biotechnology Information. PMID:26615191
EpiFactors: a comprehensive database of human epigenetic factors and complexes. PMID:26153137
EpiDBase: a manually curated database for small molecule modulators of epigenetic landscape. PMID:25776023
Database resources of the National Center for Biotechnology Information. PMID:25398906
Integrating omics technologies to study pulmonary physiology and pathology at the systems level. PMID:24802001
Epigenetic regulation of vitamin D metabolism in human lung adenocarcinoma. PMID:24736069
Database resources of the National Center for Biotechnology Information. PMID:24259429
EPITRANS: a database that integrates epigenome and transcriptome data. PMID:24213601
Genomic structure and variation of nuclear factor (erythroid-derived 2)-like 2. PMID:23936606
NCBI Epigenomics: what's new for 2013. PMID:23193265
Database resources of the National Center for Biotechnology Information. PMID:23193264
NCBI GEO: archive for functional genomics data sets--update. PMID:23193258
HEMD: an integrated tool of human epigenetic enzymes and chemical modulators for therapeutics. PMID:22761927
The NIH Roadmap Epigenomics Program data resource. PMID:22690667
CistromeMap: a knowledgebase and web server for ChIP-Seq and DNase-Seq studies in mouse and human. PMID:22495751
Database resources of the National Center for Biotechnology Information. PMID:22140104
BioProject and BioSample databases at NCBI: facilitating capture and organization of metadata. PMID:22139929
Strategies to explore functional genomics data sets in NCBI's GEO database. PMID:22130872
Emerging patterns of epigenomic variation. PMID:21507501
NCBI GEO: archive for functional genomics data sets--10 years on. PMID:21097893
Tags:
Tags
More detailed information about this field from each metasource.
bioinformatics
metasource: re3data.org
version: re3data.org: NCBI Epigenomics; editing status 2019-04-26; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R34K7J last accessed: 2022-11-04
chromatin
metasource: re3data.org
version: re3data.org: NCBI Epigenomics; editing status 2019-04-26; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R34K7J last accessed: 2022-11-04
dna
metasource: re3data.org
version: re3data.org: NCBI Epigenomics; editing status 2019-04-26; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R34K7J last accessed: 2022-11-04
dna fingerprinting
metasource: re3data.org
version: re3data.org: NCBI Epigenomics; editing status 2019-04-26; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R34K7J last accessed: 2022-11-04
gene amplification
metasource: re3data.org
version: re3data.org: NCBI Epigenomics; editing status 2019-04-26; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R34K7J last accessed: 2022-11-04
gene libraries
metasource: re3data.org
version: re3data.org: NCBI Epigenomics; editing status 2019-04-26; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R34K7J last accessed: 2022-11-04
gene mapping
metasource: re3data.org
version: re3data.org: NCBI Epigenomics; editing status 2019-04-26; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R34K7J last accessed: 2022-11-04
genetic code
metasource: re3data.org
version: re3data.org: NCBI Epigenomics; editing status 2019-04-26; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R34K7J last accessed: 2022-11-04
genomics
metasource: re3data.org
version: re3data.org: NCBI Epigenomics; editing status 2019-04-26; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R34K7J last accessed: 2022-11-04
histones
metasource: re3data.org
version: re3data.org: NCBI Epigenomics; editing status 2019-04-26; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R34K7J last accessed: 2022-11-04
epigenomics
metasource: bio.tools
version: extracted_at: 2022-11-04T11:36:08.567239
epigenetics
metasource: bio.tools
version: extracted_at: 2022-11-04T11:36:08.567239
mapping
metasource: bio.tools
version: extracted_at: 2022-11-04T11:36:08.567239
gene expression
metasource: bio.tools
version: extracted_at: 2022-11-04T11:36:08.567239
Tags
More detailed information about this field from each metasource.
bioinformatics
metasource: re3data.orgversion: re3data.org: NCBI Epigenomics; editing status 2019-04-26; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R34K7J last accessed: 2022-11-04
chromatin
metasource: re3data.orgversion: re3data.org: NCBI Epigenomics; editing status 2019-04-26; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R34K7J last accessed: 2022-11-04
dna
metasource: re3data.orgversion: re3data.org: NCBI Epigenomics; editing status 2019-04-26; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R34K7J last accessed: 2022-11-04
dna fingerprinting
metasource: re3data.orgversion: re3data.org: NCBI Epigenomics; editing status 2019-04-26; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R34K7J last accessed: 2022-11-04
gene amplification
metasource: re3data.orgversion: re3data.org: NCBI Epigenomics; editing status 2019-04-26; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R34K7J last accessed: 2022-11-04
gene libraries
metasource: re3data.orgversion: re3data.org: NCBI Epigenomics; editing status 2019-04-26; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R34K7J last accessed: 2022-11-04
gene mapping
metasource: re3data.orgversion: re3data.org: NCBI Epigenomics; editing status 2019-04-26; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R34K7J last accessed: 2022-11-04
genetic code
metasource: re3data.orgversion: re3data.org: NCBI Epigenomics; editing status 2019-04-26; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R34K7J last accessed: 2022-11-04
genomics
metasource: re3data.orgversion: re3data.org: NCBI Epigenomics; editing status 2019-04-26; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R34K7J last accessed: 2022-11-04
histones
metasource: re3data.orgversion: re3data.org: NCBI Epigenomics; editing status 2019-04-26; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R34K7J last accessed: 2022-11-04
epigenomics
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:36:08.567239
epigenetics
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:36:08.567239
mapping
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:36:08.567239
gene expression
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:36:08.567239
bioinformatics chromatin dna dna fingerprinting gene amplification gene libraries gene mapping genetic code genomics histones epigenomics epigenetics mapping gene expression
Need help integrating and/or managing biomedical data?