MorphoBank
Names
More detailed information about this field from each metasource.
MorphoBank
metasource: Fairsharing.org
version: FAIRsharing.org: MorphoBank; MorphoBank; DOI: https://doi.org/10.25504/FAIRsharing.1y63n8; Last edited: Nov. 9, 2020, 5:13 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
metasource: re3data.org
version: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
Homology of phenotypes over the web
metasource: re3data.org
version: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
MorphoBank Project
metasource: re3data.org
version: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
Names
More detailed information about this field from each metasource.
MorphoBank
metasource: Fairsharing.orgversion: FAIRsharing.org: MorphoBank; MorphoBank; DOI: https://doi.org/10.25504/FAIRsharing.1y63n8; Last edited: Nov. 9, 2020, 5:13 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
metasource: re3data.org
version: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
Homology of phenotypes over the web
metasource: re3data.orgversion: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
MorphoBank Project
metasource: re3data.orgversion: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
Other names: Homology of phenotypes over the web, MorphoBank Project
Names
More detailed information about this field from each metasource.
MorphoBank
metasource: Fairsharing.orgversion: FAIRsharing.org: MorphoBank; MorphoBank; DOI: https://doi.org/10.25504/FAIRsharing.1y63n8; Last edited: Nov. 9, 2020, 5:13 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
metasource: re3data.org
version: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
Homology of phenotypes over the web
metasource: re3data.orgversion: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
MorphoBank Project
metasource: re3data.orgversion: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
MorphoBank provides a digital archive of biodiversity and evolutionary research data, specifically systematics (the science of determining the evolutionary relationships among species). MorphoBank aids development of the Tree of Life - the genealogy of all living and extinct species. Heritable features - both genotypes (e.g., DNA sequences) and phenotypes (e.g., anatomy, behavior, physiology) are stored as part of the Tree of Life project. While the genomic part of this work is archived at the National Center for Biotechnology Information (NCBI), MorphoBank is part of the infrastructure for storing and sharing phenotype data, including information on anatomy, physiology, behavior and other features of species. One can think of MorphoBank as two databases in one: one that permits researchers to upload images and affiliate data with those images (labels, species names, etc.) and a second database that allows researchers to upload morphological data and affiliate it with phylogenetic matrices. In both cases, MorphoBank is project-based, meaning a team of researchers can create a project and share the images and associated data exclusively with each other. When a paper associated with the project is published, the research team can make their data permanently available for view on MorphoBank where it is now archived. The phylogenetic matrix aspect of MorphoBank is designed to aid systematists working alone or in teams to build large phylogenetic trees using morphology (anatomy, histology, neurology, or any aspect of phenotypes) or a combination of morphology and molecular data.
Description
More detailed information about this field from each metasource.
MorphoBank provides a digital archive of biodiversity and evolutionary research data, specifically systematics (the science of determining the evolutionary relationships among species). MorphoBank aids development of the Tree of Life - the genealogy of all living and extinct species. Heritable features - both genotypes (e.g., DNA sequences) and phenotypes (e.g., anatomy, behavior, physiology) are stored as part of the Tree of Life project. While the genomic part of this work is archived at the National Center for Biotechnology Information (NCBI), MorphoBank is part of the infrastructure for storing and sharing phenotype data, including information on anatomy, physiology, behavior and other features of species. One can think of MorphoBank as two databases in one: one that permits researchers to upload images and affiliate data with those images (labels, species names, etc.) and a second database that allows researchers to upload morphological data and affiliate it with phylogenetic matrices. In both cases, MorphoBank is project-based, meaning a team of researchers can create a project and share the images and associated data exclusively with each other. When a paper associated with the project is published, the research team can make their data permanently available for view on MorphoBank where it is now archived. The phylogenetic matrix aspect of MorphoBank is designed to aid systematists working alone or in teams to build large phylogenetic trees using morphology (anatomy, histology, neurology, or any aspect of phenotypes) or a combination of morphology and molecular data.
metasource: Fairsharing.orgversion: FAIRsharing.org: MorphoBank; MorphoBank; DOI: https://doi.org/10.25504/FAIRsharing.1y63n8; Last edited: Nov. 9, 2020, 5:13 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
MorphoBank is a web application with tools and archives for evolutionary research, specifically systematics (the science of determining the evolutionary relationships among species). Study of the phenotype, which is often visually-based, is central to contemporary systematics and taxonomic research. MorphoBank was developed specifically to provide much needed tools for the expansion and modernization of phylogenetic work on the phenotype
metasource: re3data.orgversion: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
Webpage:
https://morphobank.org/Webpage
More detailed information about this field from each metasource.
https://morphobank.org/
metasource: Fairsharing.orgversion: FAIRsharing.org: MorphoBank; MorphoBank; DOI: https://doi.org/10.25504/FAIRsharing.1y63n8; Last edited: Nov. 9, 2020, 5:13 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
metasource: re3data.org
version: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
Licence:
Name: Creative Commons CC0 1.0 Universal (CC0 1.0) Public Domain DedicationLicence name
More detailed information about this field from each metasource.
Creative Commons CC0 1.0 Universal (CC0 1.0) Public Domain Dedication
metasource: Fairsharing.orgversion: FAIRsharing.org: MorphoBank; MorphoBank; DOI: https://doi.org/10.25504/FAIRsharing.1y63n8; Last edited: Nov. 9, 2020, 5:13 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
Copyrights
metasource: re3data.orgversion: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
Licence URL
More detailed information about this field from each metasource.
https://creativecommons.org/publicdomain/zero/1.0/
metasource: Fairsharing.orgversion: FAIRsharing.org: MorphoBank; MorphoBank; DOI: https://doi.org/10.25504/FAIRsharing.1y63n8; Last edited: Nov. 9, 2020, 5:13 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
https://morphobank.org/index.php/FAQ/Index
metasource: re3data.orgversion: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
Publications:
(7)
Publications
More detailed information about this field from each metasource.
A RESTful API for Access to Phylogenetic Tools via the CIPRES Science Gateway
PMID: 25861210
metasource: Fairsharing.org
version: FAIRsharing.org: MorphoBank; MorphoBank; DOI: https://doi.org/10.25504/FAIRsharing.1y63n8; Last edited: Nov. 9, 2020, 5:13 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
Best practices for data sharing in phylogenetic research
PMID: 24987572
metasource: Fairsharing.org
version: FAIRsharing.org: MorphoBank; MorphoBank; DOI: https://doi.org/10.25504/FAIRsharing.1y63n8; Last edited: Nov. 9, 2020, 5:13 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
http://dx.doi.org/10.1080/02724634.2012.716114
metasource: Fairsharing.org
version: FAIRsharing.org: MorphoBank; MorphoBank; DOI: https://doi.org/10.25504/FAIRsharing.1y63n8; Last edited: Nov. 9, 2020, 5:13 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
http://dx.doi.org/10.1111/j.1096-0031.2011.00355.x
metasource: Fairsharing.org
version: FAIRsharing.org: MorphoBank; MorphoBank; DOI: https://doi.org/10.25504/FAIRsharing.1y63n8; Last edited: Nov. 9, 2020, 5:13 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
http://dx.doi.org/10.1080/02724634.2011.546742
metasource: Fairsharing.org
version: FAIRsharing.org: MorphoBank; MorphoBank; DOI: https://doi.org/10.25504/FAIRsharing.1y63n8; Last edited: Nov. 9, 2020, 5:13 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
http://dx.doi.org/10.1016/S0169-5347(02)00040-X
metasource: Fairsharing.org
version: FAIRsharing.org: MorphoBank; MorphoBank; DOI: https://doi.org/10.25504/FAIRsharing.1y63n8; Last edited: Nov. 9, 2020, 5:13 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
http://dx.doi.org/10.3897/rio.3.e12431
metasource: Fairsharing.org
version: FAIRsharing.org: MorphoBank; MorphoBank; DOI: https://doi.org/10.25504/FAIRsharing.1y63n8; Last edited: Nov. 9, 2020, 5:13 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
Publications
More detailed information about this field from each metasource.
A RESTful API for Access to Phylogenetic Tools via the CIPRES Science Gateway
PMID: 25861210
metasource: Fairsharing.org
version: FAIRsharing.org: MorphoBank; MorphoBank; DOI: https://doi.org/10.25504/FAIRsharing.1y63n8; Last edited: Nov. 9, 2020, 5:13 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
Best practices for data sharing in phylogenetic research
PMID: 24987572
metasource: Fairsharing.org
version: FAIRsharing.org: MorphoBank; MorphoBank; DOI: https://doi.org/10.25504/FAIRsharing.1y63n8; Last edited: Nov. 9, 2020, 5:13 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
http://dx.doi.org/10.1080/02724634.2012.716114
metasource: Fairsharing.orgversion: FAIRsharing.org: MorphoBank; MorphoBank; DOI: https://doi.org/10.25504/FAIRsharing.1y63n8; Last edited: Nov. 9, 2020, 5:13 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
http://dx.doi.org/10.1111/j.1096-0031.2011.00355.x
metasource: Fairsharing.orgversion: FAIRsharing.org: MorphoBank; MorphoBank; DOI: https://doi.org/10.25504/FAIRsharing.1y63n8; Last edited: Nov. 9, 2020, 5:13 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
http://dx.doi.org/10.1080/02724634.2011.546742
metasource: Fairsharing.orgversion: FAIRsharing.org: MorphoBank; MorphoBank; DOI: https://doi.org/10.25504/FAIRsharing.1y63n8; Last edited: Nov. 9, 2020, 5:13 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
http://dx.doi.org/10.1016/S0169-5347(02)00040-X
metasource: Fairsharing.orgversion: FAIRsharing.org: MorphoBank; MorphoBank; DOI: https://doi.org/10.25504/FAIRsharing.1y63n8; Last edited: Nov. 9, 2020, 5:13 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
http://dx.doi.org/10.3897/rio.3.e12431
metasource: Fairsharing.orgversion: FAIRsharing.org: MorphoBank; MorphoBank; DOI: https://doi.org/10.25504/FAIRsharing.1y63n8; Last edited: Nov. 9, 2020, 5:13 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
-
A RESTful API for Access to Phylogenetic Tools via the CIPRES Science Gateway
PubMed citations: 115.
115 articles citing: A RESTful API for Access to Phylogenetic Tools via the CIPRES Science Gateway
Genome-Wide Identification and Expression Pattern Analysis of KNOX Gene Family in Orchidaceae. PMID:35712569
Generation of a homozygous mutant drug transporter (ABCB1) knockout line in the sea urchin Lytechinus pictus. PMID:35666622
Host Shift Speciation of the Ectomycorrhizal Genus Suillus (Suillineae, Boletales) and Biogeographic Comparison With Its Host Pinaceae. PMID:35432238
Phylogenomic resolution of the root of Panpulmonata, a hyperdiverse radiation of gastropods: new insight into the evolution of air breathing. PMID:35382597
Species Identification in Plant-Associated Prokaryotes and Fungi Using DNA. PMID:35265781
Genomic Characteristics Revealed Plasmid-Mediated Pathogenicity and Ubiquitous Rifamycin Resistance of Rhodococcus equi. PMID:35252029
The complete chloroplast genome of Hylotelephium erythrostictum (Miq.) H. Ohba (Crassulaceae). PMID:35174293
Novel gene rearrangement in the mitochondrial genome of Anastatus fulloi (Hymenoptera Chalcidoidea) and phylogenetic implications for Chalcidoidea. PMID:35079090
A new combination in Pseudolappula (Boraginaceae, Rochelieae) based on morphological, molecular and palynological evidence. PMID:35068969
Hysterangiales revisited: expanded phylogeny reveals new genera and two new suborders. PMID:35005573
The complete chloroplast genome sequence of Artabotrys pilosus (Annonaceae). PMID:34912957
The complete chloroplast genome of Sedum tricarpum Makino. (Crassulaceae). PMID:34912956
Correlation between acoustic divergence and phylogenetic distance in soniferous European gobiids (Gobiidae; Gobius lineage). PMID:34890403
Population dynamics linked to glacial cycles in Cercis chuniana F. P. Metcalf (Fabaceae) endemic to the montane regions of subtropical China. PMID:34815745
Pan-genome analysis identifies intersecting roles for Pseudomonas specialized metabolites in potato pathogen inhibition. PMID:34792466
Draft genome and description of Waterburya agarophytonicola gen. nov. sp. nov. (Pleurocapsales, Cyanobacteria): a seaweed symbiont. PMID:34674103
Molecular species delimitation of shrub frogs of the genus Pseudophilautus (Anura, Rhacophoridae). PMID:34665841
Three new species of Creptotrema (Trematoda, Allocreadiidae) with an amended diagnosis of the genus and reassignment of Auriculostoma (Allocreadiidae), based on morphological and molecular evidence. PMID:34643505
Five Novel Taxa from Freshwater Habitats and New Taxonomic Insights of Pleurotheciales and Savoryellomycetidae. PMID:34575749
The critical role of natural history museums in advancing eDNA for biodiversity studies: a case study with Amazonian fishes. PMID:34518574
Human Adenovirus Type 7 Infections in Hubei, China During 2018-2019: Epidemic Features and Genetic Characterization of the Detected Viruses. PMID:34490137
Fungal Planet description sheets: 1112-1181. PMID:34456379
Assessing the effects of a two-amino acid flexibility in the Hemagglutinin 220-loop receptor-binding domain on the fitness of Influenza A(H9N2) viruses. PMID:33866955
The genome of the stable fly, Stomoxys calcitrans, reveals potential mechanisms underlying reproduction, host interactions, and novel targets for pest control. PMID:33750380
Complete mitochondrial genome of Chroicocephalus brunnicephalus from India: phylogeny with other Larids. PMID:33659671
Oral, Cloacal, and Hemipenal Actinomycosis in Captive Ball Pythons (Python regius). PMID:33490131
Structure of Erm-modified 70S ribosome reveals the mechanism of macrolide resistance. PMID:33462493
Genome-wide macroevolutionary signatures of key innovations in butterflies colonizing new host plants. PMID:33441560
Phylogenomic fingerprinting of tempo and functions of horizontal gene transfer within ochrophytes. PMID:33419955
Re-Evaluating the Internal Phylogenetic Relationships of Collembola by Means of Mitogenome Data. PMID:33396901
Repeated Evolution of Inactive Pseudonucleases in a Fungal Branch of the Dis3/RNase II Family of Nucleases. PMID:33313834
Genomic Analysis Enlightens Agaricales Lifestyle Evolution and Increasing Peroxidase Diversity. PMID:33211093
Evolution of Developmental GATA Factors in Nematodes. PMID:33207804
A new species of Thinouia (Paullinieae, Sapindaceae) from the Amazon and its phylogenetic placement. PMID:33192150
New Light on Historical Specimens Reveals a New Species of Ladybird (Coleoptera: Coccinellidae): Morphological, Museomic, and Phylogenetic Analyses. PMID:33172182
Antiretroviral drug use and HIV drug resistance in female sex workers in Tanzania and the Dominican Republic. PMID:33119663
Fungal Planet description sheets: 1042-1111. PMID:33116344
Effect of Host, Environment and Fungal Growth on Fungal Leaf Endophyte Communities in Taiwan. PMID:33114080
Genetic identification and hybridization in the seagrass genus Halophila (Hydrocharitaceae) in Sri Lankan waters. PMID:33062439
Two new combinations in Oreocharis (Gesneriaceae) based on morphological, molecular and cytological evidence. PMID:32934447
Subcutaneous nodules and dermatitis associated with non-immitis non-repens dirofilariosis morphologically consistent with Dirofilaria striata in a 2-year-old male domestic cat in Florida, USA. PMID:32838703
From economy to luxury: Copper homeostasis in Chlamydomonas and other algae. PMID:32800924
Human Immunodeficiency Virus (HIV) Drug Resistance, Phylogenetic Analysis, and Superinfection Among Men Who Have Sex with Men and Transgender Women in Sub-Saharan Africa: HIV Prevention Trials Network (HPTN) 075 Study. PMID:32761071
Spatial and Temporal Evolutionary Patterns in Puumala Orthohantavirus (PUUV) S Segment. PMID:32650456
Functional insights from the GC-poor genomes of two aphid parasitoids, Aphidius ervi and Lysiphlebus fabarum. PMID:32471448
Visual pigment evolution in Characiformes: The dynamic interplay of teleost whole-genome duplication, surviving opsins and spectral tuning. PMID:32421918
Testis-specific serine kinase protein family in male fertility and as targets for non-hormonal male contraception†. PMID:32337545
Isolation and characterization of new Puumala orthohantavirus strains from Germany. PMID:32328924
The complete mitochondrial genome of the endangered Assam Roofed Turtle, Pangshura sylhetensis (Testudines: Geoemydidae): Genomic features and phylogeny. PMID:32324729
Divide to Conquer: Evolutionary History of Allioideae Tribes (Amaryllidaceae) Is Linked to Distinct Trends of Karyotype Evolution. PMID:32318079
Pseudobactrodesmium (Dactylosporaceae, Eurotiomycetes, Fungi) a Novel Lignicolous Genus. PMID:32300334
Of Retinoids and Organotins: The Evolution of the Retinoid X Receptor in Metazoa. PMID:32290525
The open EEGLAB portal Interface: High-Performance computing with EEGLAB. PMID:32289453
Exceptional diversity of opsin expression patterns in Neogonodactylus oerstedii (Stomatopoda) retinas. PMID:32241889
Plastome Evolution and Phylogeny of Orchidaceae, With 24 New Sequences. PMID:32153600
Asymmetron lucayanum: How many species are valid? PMID:32130230
Molecular Evolution and Diversification of Proteins Involved in miRNA Maturation Pathway. PMID:32121542
Clinical Manifestation and Molecular Characterization of a Novel Member of the Nannizziopsiaceae in a Pulmonary Granuloma From a Galapagos Tortoise (Chelonoidis nigra). PMID:32118056
Shared response to changes in drainage basin: Phylogeography of the Yunnan small narrow-mouthed frog, Glyphoglossus yunnanensis (Anura: Microhylidae). PMID:32076534
Structural evolution drives diversification of the large LRR-RLK gene family. PMID:31990988
Igh locus structure and evolution in Platyrrhines: new insights from a genomic perspective. PMID:31838542
Origin and Evolution of Two Independently Duplicated Genes Encoding UDP- Glucose: Glycoprotein Glucosyltransferases in Caenorhabditis and Vertebrates. PMID:31796523
Early diversification and permeable species boundaries in the Mediterranean firs. PMID:31730195
The first complete mitochondrial genome of the Indian Tent Turtle, Pangshura tentoria (Testudines: Geoemydidae): Characterization and comparative analysis. PMID:31624586
Consistent host and organ occupancy of phyllosphere bacteria in a community of wild herbaceous plant species. PMID:31624344
Unexpected species diversity in electric eels with a description of the strongest living bioelectricity generator. PMID:31506444
Exploration of stem endophytic communities revealed developmental stage as one of the drivers of fungal endophytic community assemblages in two Amazonian hardwood genera. PMID:31481728
Biocontrol Strains Differentially Shift the Genetic Structure of Indigenous Soil Populations of Aspergillus flavus. PMID:31417528
Nectria-related fungi causing dieback and canker diseases in China, with Neothyronectriacitri sp. nov. described. PMID:31341399
Updated taxonomy of LactifluussectionLuteoli: L.russulisporus from Australia and L.caliendrifer from Thailand. PMID:31341397
T-BAS Version 2.1: Tree-Based Alignment Selector Toolkit for Evolutionary Placement of DNA Sequences and Viewing Alignments and Specimen Metadata on Curated and Custom Trees. PMID:31320426
The antenna-like domain of the cyanobacterial ferrochelatase can bind chlorophyll and carotenoids in an energy-dissipative configuration. PMID:31167780
Prevalence and Diversity of Endosymbionts in Cassava Whiteflies (Hemiptera: Aleyrodidae) From Colombia. PMID:31115477
Evolutionary Plasticity in Detoxification Gene Modules: The Preservation and Loss of the Pregnane X Receptor in Chondrichthyes Lineages. PMID:31083458
Human COQ10A and COQ10B are distinct lipid-binding START domain proteins required for coenzyme Q function. PMID:31048406
Secondary Metabolite Dereplication and Phylogenetic Analysis Identify Various Emerging Mycotoxins and Reveal the High Intra-Species Diversity in Aspergillus flavus. PMID:31024476
Multi-locus DNA sequence analysis, antifungal agent susceptibility, and fungal keratitis outcome in horses from Southeastern United States. PMID:30921394
Principles of plastid reductive evolution illuminated by nonphotosynthetic chrysophytes. PMID:30872488
Functional lability of RNA-dependent RNA polymerases in animals. PMID:30779744
Origin and evolution of plexins, semaphorins, and Met receptor tyrosine kinases. PMID:30760850
Biosynthetic Gene Content of the 'Perfume Lichens' Evernia prunastri and Pseudevernia furfuracea. PMID:30626017
Nezara viridula (Hemiptera: Pentatomidae) transcriptomic analysis and neuropeptidomics. PMID:30467353
Cryptic Diversity Hidden within the Leafminer Genus Liriomyza (Diptera: Agromyzidae). PMID:30445780
Beta-tubulin and Actin gene phylogeny supports Phaeoacremoniumovale as a new species from freshwater habitats in China. PMID:30344440
Patients with Chronic Obstructive Pulmonary Disease harbour a variation of Haemophilus species. PMID:30282975
Sperm capacitation is associated with phosphorylation of the testis-specific radial spoke protein Rsph6a†. PMID:30239614
Scent matters: differential contribution of scent to insect response in flowers with insect vs. wind pollination traits. PMID:30052759
Climate and host-plant associations shaped the evolution of ceutorhynch weevils throughout the Cenozoic. PMID:30040114
Conspicuously concealed: revision of the arid clade of the Gehyra variegata (Gekkonidae) group in Western Australia using an integrative molecular and morphological approach, with the description of five cryptic species. PMID:30038877
Complete Chloroplast Genome of Cercis chuniana (Fabaceae) with Structural and Genetic Comparison to Six Species in Caesalpinioideae. PMID:29693617
Phylogeography of Daphnia magna Straus (Crustacea: Cladocera) in Northern Eurasia: Evidence for a deep longitudinal split between mitochondrial lineages. PMID:29543844
Genetic diversity and connectivity of the megamouth shark (Megachasma pelagios). PMID:29527411
Fish polyomaviruses belong to two distinct evolutionary lineages. PMID:29517483
Synopsis of the SOFL Plant-Specific Gene Family. PMID:29467189
Divergent bornaviruses from Australian carpet pythons with neurological disease date the origin of extant Bornaviridae prior to the end-Cretaceous extinction. PMID:29462190
Population genomic footprints of host adaptation, introgression and recombination in coffee leaf rust. PMID:29328532
Determination of the diversity of astroviruses in feces from cats in Florida. PMID:29202674
Global population structure and adaptive evolution of aflatoxin-producing fungi. PMID:29152206
Unique genome organization of non-mammalian papillomaviruses provides insights into the evolution of viral early proteins. PMID:29026649
Multiple Geographical Origins of Environmental Sex Determination enhanced the diversification of Darwin's Favourite Orchids. PMID:29018291
Andean Mountain Building Did not Preclude Dispersal of Lowland Epiphytic Orchids in the Neotropics. PMID:28687774
Recent origin and rapid speciation of Neotropical orchids in the world's richest plant biodiversity hotspot. PMID:28631324
Chimeric origins of ochrophytes and haptophytes revealed through an ancient plastid proteome. PMID:28498102
Multiple measures could alleviate long-branch attraction in phylogenomic reconstruction of Cupressoideae (Cupressaceae). PMID:28120880
LXRα and LXRβ Nuclear Receptors Evolved in the Common Ancestor of Gnathostomes. PMID:28057729
Evidence of functional divergence in MSP7 paralogous proteins: a molecular-evolutionary and phylogenetic analysis. PMID:27894257
A Shorter Route to Antibody Binders via Quantitative in vitro Bead-Display Screening and Consensus Analysis. PMID:27819305
Influenza Research Database: An integrated bioinformatics resource for influenza virus research. PMID:27679478
Toward a Self-Updating Platform for Estimating Rates of Speciation and Migration, Ages, and Relationships of Taxa. PMID:27616324
Mammal madness: is the mammal tree of life not yet resolved? PMID:27325836
The Ancient Evolutionary History of Polyomaviruses. PMID:27093155
Evolutionary functional elaboration of the Elovl2/5 gene family in chordates. PMID:26856376
Spintharus flavidus in the Caribbean-a 30 million year biogeographical history and radiation of a 'widespread species'. PMID:26618089
Draft Genomes, Phylogenetic Reconstruction, and Comparative Genomics of Two Novel Cohabiting Bacterial Symbionts Isolated from Frankliniella occidentalis. PMID:26185096
Origin and diversification of living cycads: a cautionary tale on the impact of the branching process prior in Bayesian molecular dating. PMID:25884423 -
Best practices for data sharing in phylogenetic research
PubMed citations: 9.
9 articles citing: Best practices for data sharing in phylogenetic research
Vascular plants from European Russia in the CSBG SB RAS Digital Herbarium. PMID:33117078
A Logical Model of Homology for Comparative Biology. PMID:31596473
JPhyloIO: a Java library for event-based reading and writing of different phylogenetic file formats through a common interface. PMID:31331268
Automated Integration of Trees and Traits: A Case Study Using Paired Fin Loss Across Teleost Fishes. PMID:29325126
PhyloPen: Phylogenetic Tree Browsing Using a Pen and Touch Interface. PMID:26693078
ReproPhylo: An Environment for Reproducible Phylogenomics. PMID:26335558
Visualising Geophylogenies in Web Maps Using GeoJSON. PMID:26146589
Moving the mountain: analysis of the effort required to transform comparative anatomy into computable anatomy. PMID:25972520
Phylesystem: a git-based data store for community-curated phylogenetic estimates. PMID:25940563 - http://dx.doi.org/10.1080/02724634.2012.716114
- http://dx.doi.org/10.1111/j.1096-0031.2011.00355.x
- http://dx.doi.org/10.1080/02724634.2011.546742
Tags:
Tags
More detailed information about this field from each metasource.
biological imaging
metasource: Fairsharing.org
version: FAIRsharing.org: MorphoBank; MorphoBank; DOI: https://doi.org/10.25504/FAIRsharing.1y63n8; Last edited: Nov. 9, 2020, 5:13 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
evolution
metasource: Fairsharing.org
version: FAIRsharing.org: MorphoBank; MorphoBank; DOI: https://doi.org/10.25504/FAIRsharing.1y63n8; Last edited: Nov. 9, 2020, 5:13 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
homology of phenotypes
metasource: re3data.org
version: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
cladistic matrices
metasource: re3data.org
version: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
cladistic matrix
metasource: re3data.org
version: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
cladistics
metasource: re3data.org
version: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
comparative anatomy
metasource: re3data.org
version: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
evolutionary research
metasource: re3data.org
version: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
morphology
metasource: re3data.org
version: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
phylogenetic matrices
metasource: re3data.org
version: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
phylogenetic matrix
metasource: re3data.org
version: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
phylogenetic work
metasource: re3data.org
version: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
phylophenomics
metasource: re3data.org
version: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
tree of life
metasource: re3data.org
version: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
Tags
More detailed information about this field from each metasource.
biological imaging
metasource: Fairsharing.orgversion: FAIRsharing.org: MorphoBank; MorphoBank; DOI: https://doi.org/10.25504/FAIRsharing.1y63n8; Last edited: Nov. 9, 2020, 5:13 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
evolution
metasource: Fairsharing.orgversion: FAIRsharing.org: MorphoBank; MorphoBank; DOI: https://doi.org/10.25504/FAIRsharing.1y63n8; Last edited: Nov. 9, 2020, 5:13 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
homology of phenotypes
metasource: re3data.orgversion: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
cladistic matrices
metasource: re3data.orgversion: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
cladistic matrix
metasource: re3data.orgversion: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
cladistics
metasource: re3data.orgversion: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
comparative anatomy
metasource: re3data.orgversion: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
evolutionary research
metasource: re3data.orgversion: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
morphology
metasource: re3data.orgversion: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
phylogenetic matrices
metasource: re3data.orgversion: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
phylogenetic matrix
metasource: re3data.orgversion: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
phylogenetic work
metasource: re3data.orgversion: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
phylophenomics
metasource: re3data.orgversion: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
tree of life
metasource: re3data.orgversion: re3data.org: MorphoBank; editing status 2021-11-16; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3PC7F last accessed: 2022-11-04
biological imaging evolution homology of phenotypes cladistic matrices cladistic matrix cladistics comparative anatomy evolutionary research morphology phylogenetic matrices phylogenetic matrix phylogenetic work phylophenomics tree of life
Need help integrating and/or managing biomedical data?