Kidney and Urinary Pathway Knowledgebase
Names
More detailed information about this field from each metasource.
Kidney and Urinary Pathway Knowledgebase
metasource: Fairsharing.org
version: FAIRsharing.org: KUPKB; Kidney and Urinary Pathway Knowledgebase; DOI: https://doi.org/10.25504/FAIRsharing.dq83p6; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
KUPKB
metasource: Fairsharing.org
version: FAIRsharing.org: KUPKB; Kidney and Urinary Pathway Knowledgebase; DOI: https://doi.org/10.25504/FAIRsharing.dq83p6; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
Names
More detailed information about this field from each metasource.
Kidney and Urinary Pathway Knowledgebase
metasource: Fairsharing.orgversion: FAIRsharing.org: KUPKB; Kidney and Urinary Pathway Knowledgebase; DOI: https://doi.org/10.25504/FAIRsharing.dq83p6; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
KUPKB
metasource: Fairsharing.orgversion: FAIRsharing.org: KUPKB; Kidney and Urinary Pathway Knowledgebase; DOI: https://doi.org/10.25504/FAIRsharing.dq83p6; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
Names
More detailed information about this field from each metasource.
Kidney and Urinary Pathway Knowledgebase
metasource: Fairsharing.orgversion: FAIRsharing.org: KUPKB; Kidney and Urinary Pathway Knowledgebase; DOI: https://doi.org/10.25504/FAIRsharing.dq83p6; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
KUPKB
metasource: Fairsharing.orgversion: FAIRsharing.org: KUPKB; Kidney and Urinary Pathway Knowledgebase; DOI: https://doi.org/10.25504/FAIRsharing.dq83p6; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
This source may no longer be available. No known URL could be resolved successfully.
The KUPKB is a collection of omics datasets that have been extracted from scientific publications and other related renal databases. The iKUP browser provides a single point of entry for you to query and browse these datasets.
Description
More detailed information about this field from each metasource.
The KUPKB is a collection of omics datasets that have been extracted from scientific publications and other related renal databases. The iKUP browser provides a single point of entry for you to query and browse these datasets.
metasource: Fairsharing.orgversion: FAIRsharing.org: KUPKB; Kidney and Urinary Pathway Knowledgebase; DOI: https://doi.org/10.25504/FAIRsharing.dq83p6; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
Webpage:
http://www.kupkb.orgWebpage
More detailed information about this field from each metasource.
http://www.kupkb.org
metasource: Fairsharing.orgversion: FAIRsharing.org: KUPKB; Kidney and Urinary Pathway Knowledgebase; DOI: https://doi.org/10.25504/FAIRsharing.dq83p6; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
Publications:
Publications
More detailed information about this field from each metasource.
Developing a kidney and urinary pathway knowledge base
PMID: 21624162
metasource: Fairsharing.org
version: FAIRsharing.org: KUPKB; Kidney and Urinary Pathway Knowledgebase; DOI: https://doi.org/10.25504/FAIRsharing.dq83p6; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
The KUPKB: a novel Web application to access multiomics data on kidney disease
PMID: 22345404
metasource: Fairsharing.org
version: FAIRsharing.org: KUPKB; Kidney and Urinary Pathway Knowledgebase; DOI: https://doi.org/10.25504/FAIRsharing.dq83p6; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
Publications
More detailed information about this field from each metasource.
Developing a kidney and urinary pathway knowledge base
PMID: 21624162
metasource: Fairsharing.org
version: FAIRsharing.org: KUPKB; Kidney and Urinary Pathway Knowledgebase; DOI: https://doi.org/10.25504/FAIRsharing.dq83p6; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
The KUPKB: a novel Web application to access multiomics data on kidney disease
PMID: 22345404
metasource: Fairsharing.org
version: FAIRsharing.org: KUPKB; Kidney and Urinary Pathway Knowledgebase; DOI: https://doi.org/10.25504/FAIRsharing.dq83p6; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
-
Developing a kidney and urinary pathway knowledge base
PubMed citations: 16.
16 articles citing: Developing a kidney and urinary pathway knowledge base
Bioinformatics for Renal and Urinary Proteomics: Call for Aggrandization. PMID:32024005
Urinary Peptidomic Biomarkers in Kidney Diseases. PMID:31877774
Agronomic Linked Data (AgroLD): A knowledge-based system to enable integrative biology in agronomy. PMID:30500839
PeptiCKDdb-peptide- and protein-centric database for the investigation of genesis and progression of chronic kidney disease. PMID:27589965
The Cell Ontology 2016: enhanced content, modularization, and ontology interoperability. PMID:27377652
Current state of the art for enhancing urine biomarker discovery. PMID:27232439
Webulous and the Webulous Google Add-On--a web service and application for ontology building from templates. PMID:27042287
Finding gene regulatory network candidates using the gene expression knowledge base. PMID:25490885
The genetics of diabetic nephropathy. PMID:24705265
State of the human proteome in 2013 as viewed through PeptideAtlas: comparing the kidney, urine, and plasma proteomes for the biology- and disease-driven Human Proteome Project. PMID:24261998
The KUPNetViz: a biological network viewer for multiple -omics datasets in kidney diseases. PMID:23883183
Analysing Syntactic Regularities and Irregularities in SNOMED-CT. PMID:23244503
Logical Gene Ontology Annotations (GOAL): exploring gene ontology annotations with OWL. PMID:22541594
Populous: a tool for building OWL ontologies from templates. PMID:22373396
Semantically enabling pharmacogenomic data for the realization of personalized medicine. PMID:22256869
Selected papers from the 13th Annual Bio-Ontologies Special Interest Group Meeting. PMID:21624154 -
The KUPKB: a novel Web application to access multiomics data on kidney disease
PubMed citations: 15.
15 articles citing: The KUPKB: a novel Web application to access multiomics data on kidney disease
Interactive Analysis, Exploration, and Visualization of RNA-Seq Data with SeqCVIBE. PMID:35314664
Chronic Kidney Disease Cohort Studies: A Guide to Metabolome Analyses. PMID:34357354
Calreticulin is important for the development of renal fibrosis and dysfunction in diabetic nephropathy. PMID:33543033
The tissue proteome in the multi-omic landscape of kidney disease. PMID:33028957
Renal biopsy-driven molecular target identification in glomerular disease. PMID:28664406
Protein-Protein Interactions: Gene Acronym Redundancies and Current Limitations Precluding Automated Data Integration. PMID:28250396
Systems biology combining human- and animal-data miRNA and mRNA data identifies new targets in ureteropelvic junction obstruction. PMID:28249581
Establishment of a integrative multi-omics expression database CKDdb in the context of chronic kidney disease (CKD). PMID:28079125
BcCluster: A Bladder Cancer Database at the Molecular Level. PMID:27376128
Omics databases on kidney disease: where they can be found and how to benefit from them. PMID:27274817
Whole-transcriptome analysis of UUO mouse model of renal fibrosis reveals new molecular players in kidney diseases. PMID:27189340
The nephrologist of tomorrow: towards a kidney-omic future. PMID:26961492
Proteases and protease inhibitors of urinary extracellular vesicles in diabetic nephropathy. PMID:25874235
The KUPNetViz: a biological network viewer for multiple -omics datasets in kidney diseases. PMID:23883183
Alzheimer's disease biomarker discovery using in silico literature mining and clinical validation. PMID:23113945
Tags:
Tags
More detailed information about this field from each metasource.
gene expression data
metasource: Fairsharing.org
version: FAIRsharing.org: KUPKB; Kidney and Urinary Pathway Knowledgebase; DOI: https://doi.org/10.25504/FAIRsharing.dq83p6; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
kidney disease
metasource: Fairsharing.org
version: FAIRsharing.org: KUPKB; Kidney and Urinary Pathway Knowledgebase; DOI: https://doi.org/10.25504/FAIRsharing.dq83p6; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
Tags
More detailed information about this field from each metasource.
gene expression data
metasource: Fairsharing.orgversion: FAIRsharing.org: KUPKB; Kidney and Urinary Pathway Knowledgebase; DOI: https://doi.org/10.25504/FAIRsharing.dq83p6; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
kidney disease
metasource: Fairsharing.orgversion: FAIRsharing.org: KUPKB; Kidney and Urinary Pathway Knowledgebase; DOI: https://doi.org/10.25504/FAIRsharing.dq83p6; Last edited: Jan. 8, 2019, 1:21 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
gene expression kidney disease
Need help integrating and/or managing biomedical data?