IEDB-3D

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IEDB-3D

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

metasource: bio.tools
version: extracted_at: 2022-11-04T11:35:36.360449

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iedb-3d

metasource: bio.tools
version: extracted_at: 2022-11-04T11:35:36.360449

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Other names: iedb-3d

Structural data within the Immune Epitope Database

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Publications

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IEDB-3D: structural data within the immune epitope database
PMID: 21030437

metasource: bio.tools
version: extracted_at: 2022-11-04T11:35:36.360449

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http://dx.doi.org/10.1093/nar/gkq888

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

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• IEDB-3D: structural data within the immune epitope database PubMed citations: 24.

  24 articles citing: IEDB-3D: structural data within the immune epitope database

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  In-Silico Analysis of Monoclonal Antibodies against SARS-CoV-2 Omicron. PMID:35215983

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  SwarmTCR: a computational approach to predict the specificity of T cell receptors. PMID:34493215

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  Immunoinformatics and Molecular Docking Studies Predicted Potential Multiepitope-Based Peptide Vaccine and Novel Compounds against Novel SARS-CoV-2 through Virtual Screening. PMID:33728324

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  In silico analysis and in vivo assessment of a novel epitope-based vaccine candidate against uropathogenic Escherichia coli. PMID:33004862

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  INeo-Epp: A Novel T-Cell HLA Class-I Immunogenicity or Neoantigenic Epitope Prediction Method Based on Sequence-Related Amino Acid Features. PMID:32626747

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  The Immune Epitope Database and Analysis Resource Program 2003-2018: reflections and outlook. PMID:31761977

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  TCRpMHCmodels: Structural modelling of TCR-pMHC class I complexes. PMID:31601838

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  Antibody Specific B-Cell Epitope Predictions: Leveraging Information From Antibody-Antigen Protein Complexes. PMID:30863406

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  Epitope Specific Antibodies and T Cell Receptors in the Immune Epitope Database. PMID:30515166

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  Structurally Mapping Antibody Repertoires. PMID:30083160

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  SEPIa, a knowledge-driven algorithm for predicting conformational B-cell epitopes from the amino acid sequence. PMID:28183272

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  An Introduction to B-Cell Epitope Mapping and In Silico Epitope Prediction. PMID:28127568

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  Progress and challenges in predicting protein interfaces. PMID:25971595

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  Progress on adenovirus-vectored universal influenza vaccines. PMID:25876176

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  A meta-learning approach for B-cell conformational epitope prediction. PMID:25403375

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  Navigating diabetes-related immune epitope data: resources and tools provided by the Immune Epitope Database (IEDB). PMID:25140192

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  Conformational B-cell epitopes prediction from sequences using cost-sensitive ensemble classifiers and spatial clustering. PMID:25045691

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  PeptiSite: a structural database of peptide binding sites in 4D. PMID:24406170

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  SAbDab: the structural antibody database. PMID:24214988

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  bNAber: database of broadly neutralizing HIV antibodies. PMID:24214957

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  The VHSE-based prediction of proteasomal cleavage sites. PMID:24040264

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  Bioinformatics resources and tools for conformational B-cell epitope prediction. PMID:23970944

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  Virtual interactomics of proteins from biochemical standpoint. PMID:22928109

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  Epitope prediction based on random peptide library screening: benchmark dataset and prediction tools evaluation. PMID:21681149
• http://dx.doi.org/10.1093/nar/gkq888

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structure databases

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

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protein structure

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

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immunological databases

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

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immunoproteins, genes and antigens

metasource: bio.tools
version: extracted_at: 2022-11-04T11:35:36.360449

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immunology

metasource: bio.tools
version: extracted_at: 2022-11-04T11:35:36.360449

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model organisms

metasource: bio.tools
version: extracted_at: 2022-11-04T11:35:36.360449

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structure analysis

metasource: bio.tools
version: extracted_at: 2022-11-04T11:35:36.360449

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structure protein structure immunology immunoproteins, genes and antigens immunology model organisms structure analysis