EchinoDB

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EchinoDB

metasource: bio.tools
version: extracted_at: 2022-11-04T11:23:30.271655

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echinodb

metasource: bio.tools
version: extracted_at: 2022-11-04T11:23:30.271655

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Other names: echinodb

EchinoDB is a database consisting of amino acid sequence othoclusters from 42 echinoderm transcriptomes. We sampled taxa to span the deepest divergences within each of the 5 extant echinoderm classes. Data can be searched by keywords such as annotation and database identifiers from the Strongylocentrotus purpuratus reference protein set at NCBI.

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Publications

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http://dx.doi.org/10.1101/2022.01.03.474134

metasource: bio.tools
version: extracted_at: 2022-11-04T11:23:30.271655

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• http://dx.doi.org/10.1101/2022.01.03.474134

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transcriptomics

metasource: bio.tools
version: extracted_at: 2022-11-04T11:23:30.271655

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rna-seq

metasource: bio.tools
version: extracted_at: 2022-11-04T11:23:30.271655

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neurobiology

metasource: bio.tools
version: extracted_at: 2022-11-04T11:23:30.271655

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sequence assembly

metasource: bio.tools
version: extracted_at: 2022-11-04T11:23:30.271655

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molecular interactions, pathways and networks

metasource: bio.tools
version: extracted_at: 2022-11-04T11:23:30.271655

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transcriptomics rna sequence neurobiology sequence assembly molecular interactions, pathways and networks