DoriC regions in bacterial and archaeal genomes
nucleic acid sequence coding and non-coding dna
G-quadruplex motifs and potentially G-quadruplex regulated genes
Group I Intron Sequence and Structure Database
DNA methylation data from single molecule, real-time sequencing
A database of short interspersed elements (SINEs)
Functional annotation and prediction of LINE-1 elements
A database of ultraconserved non-coding elements and gene regulatory blocks
Repetitive sequences in plant genomes
UniGene MicroSatellite database: short tandem repeats from various eukaryotic genomes
3'UTRs and their functional elements in C. elegans
Transposed elements influence on the transcriptome of seven vertebrates and invertebrates
DEG hosts records of currently available essential genomic elements, such as protein-coding genes and non-coding RNAs, among bacteria, archaea and eukaryotes. Essential genes in a bacterium constitute ...
Data available for download from the SGD site, be aware that data dates from 1997
Macro- and micronuclear genes in spirotrichous ciliates
Nucleosome positioning region database
OrtholugeDB contains Ortholuge-based orthology predictions for completely sequenced bacterial and archaeal genomes. It is also a resource for reciprocal best BLAST-based ortholog predictions, in-paral ...
The SNPSTR database contains the SNP-STR/microsatellite compound markers in the five model species, where sufficient SNP information exists in both of the NCBI and Ensembl databases. These species are ...
Sequence conservation in non-coding, upstream regions of orthologous genes from man and mouse is likely to reflect common regulatory DNA sites. Motivated by this assumption we have delineated a catalo ...
Tandem Repeats Database (TRDB) is a public repository of information on tandem repeats in genomic DNA and contains a variety of tools for their analysis.
Evolutionary conservation of DNA sequences provides a tool for the identification of functional elements in genomes. We have created a database of evolutionary conserved regions in vertebrate genomes, ...
The Synthetic Gene Database (http://www.evolvingcode.net/codon/sgdb/index.php) is a resource that has collected together sequence information on synthetic genes (i.e. genes that were designed conceptu ...