Other names: deepefflux
2D convolutional neural network model for identifying families of efflux proteins in transporters.
protein targeting and localisation data acquisition nucleic acid sites, features and motifs
Experimental RNA target motifs bound by splicing proteins in humans.
Database for binding affinities of protein-nucleic acid complexes and their mutants.
A database of protein S-nitrosylation
DeepMitoDB is a database of experimental and predicted subcellular localization of mitochondrial proteins with exteded functional annotation.
Inferred Biomolecular Interaction Server: protein-protein, ligand- and nucleic acid-binding sites
Database of transcription factor binding sites created from systematic literature curation and genome annotation of DNase I footprints for Drosophila.
The Nucleic Acids Database contains information about experimentally-determined nucleic acids and complex assemblies. NDB can be used to perform searches based on annotations relating to sequence, str ...
Predicted regulons in prokaryotic genomes
NAPP (Nucleic Acids Phylogenetic Profile) enables users to retrieve RNA-rich clusters from any genome in a list of 1000+ sequenced bacterial genomes. RNA-rich clusters can be viewed separately or, alt ...
Database of Dna REgulatory Motifs and motifs modules predicted from DNase I hypersensitive sites in 349 human cell and tissue samples.
P53 mutation browser.
The Hormone Receptor Target Binding Loci, HRTBLDb database contains hormone receptor binding regions (binding loci) from in vivo ChIP-based high-throughput experiments as well as in silico, computatio ...
Linear motifs in alpha-helical transmembrane proteins
Drosophila transcription factor binding specificities determined using the bacterial one-hybrid system
This is a database of comparative protein structure models of the MIP (Major Intrinsic Protein) family of proteins. The MIPs have been identified from the completed genome sequence of organisms availa ...
DiZyme open access resource for quantitative prediction of nanozyme catalytic activity
COMPARTMENTS is a weekly updated web resource that integrates evidence on protein subcellular localization from manually curated literature, high-throughput screens, automatic text mining, and sequenc ...
a set of metadata to record transformative machine learning experiments with LINCS dataset
MINAS contains the exact geometric information on the first and second-shell coordinating ligands of every metal ion present in nucleic acid structures that are deposited in the PDB and NDB. Containin ...
Provides simple-to-use REST web services to query/retrieve variant annotation data, aggregated from many popular data resources.