Decoys-R-Us

Decoys are computer generated conformations of protein sequences that possess some characteristics of native proteins, but are not biologically real. The primary use of decoys is to test scoring, or energy, functions.

Description

More detailed information about this field from each metasource.

Decoys are computer generated conformations of protein sequences that possess some characteristics of native proteins, but are not biologically real. The primary use of decoys is to test scoring, or energy, functions.

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

Webpage:

Tags:

Tags

More detailed information about this field from each metasource.

structure databases

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

protein structure

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

AutoPSI

Automated structural classification of protein sequences

ECOD

Evolutionary Classification of Protein Domains

ProSAS

Protein Structure and Alternative Splicing: effects of alternative splicing events on protein structure

GreenCircRNA

A database for plant circRNAs that act as miRNA decoys. Circular RNAs (circRNAs) are a novel type of RNAs that form covalently closed loop structures with neither 5'- 3' polarities nor polyadenylated ...

SNAPPI

Structures, iNterfaces and Alignments for Protein-Protein Interactions

LPFC

Library of protein family core structures

MALISAM

Manual alignments for structurally analogous motifs in proteins

MegaMotifbase

Structural motifs in protein families and superfamilies

PDBflex

Flexibility in protein structures

D2P2

Database of Disordered Protein Predictions

Dockground

Protein-protein interfaces in co-crystallized protein structures

SISYPHUS

The SISYPHUS database contains manually curated multiple structural alignments constructed for a set of proteins with known three-dimensional structures that have revealed non-trivial structural relat ...

Voronoia

A database for the computation of atomic packing density values of protein structures

piSite

Database of Protein Interaction Sites using multiple binding states in PDB

SIFTS

Structure Integration with Function, Taxonomy and Sequences

PSI-SGKB

Protein Structure Initiative Structural Genomics Knowledgebase

AS-ALPS

Alternative Splicing-induced Alteration of Protein Structure

MoonProt

MoonProt Database is a manually curated, searchable, internet-based resource with information about the over 200 proteins that have been experimentally verified to be moonlighting proteins. Moonlighti ...

JAIL

Structure-based interface library for macromolecules

Protein Geometry Database

Protein conformation and bond angles and lengths

Previous Next

Webpage:

More to explore:

1/20

AutoPSI

ECOD

ProSAS

GreenCircRNA

SNAPPI

LPFC

MALISAM

MegaMotifbase

PDBflex

D2P2

Dockground

SISYPHUS

Voronoia

piSite

SIFTS

PSI-SGKB

AS-ALPS

MoonProt

JAIL

Protein Geometry Database